UMP salvage - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS	{{ watchLinkText }}

Term:	UMP salvage	go back to main search page
Accession:	GO:0044206	browse the term
Definition:	Any process which produces UMP, uridine monophosphate, from derivatives of it (e.g. cytidine, uridine, cytosine) without de novo synthesis.
Synonyms:	exact_synonym:	UMP biosynthesis via nucleoside salvage pathway; UMP biosynthetic process via nucleoside salvage pathway

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Genes (6)

UMP salvage

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cda

cytidine deaminase

involved_in

ISO

(MGI:6720232|PMID:6498945)

RGD

PMID:6498945

MGI:6720232

NCBI chr 5:150,556,615...150,583,231
Ensembl chr 5:150,556,615...150,583,231

Uck1

uridine-cytidine kinase 1

involved_in

IEA
ISO

GO_REF:0000041
(MGI:84399|PMID:8951040)
(PMID:11306702)

UniProt
RGD

PMID:8951040 PMID:11306702

GO_REF:0000041 MGI:84399

NCBI chr 3:15,538,580...15,544,465
Ensembl chr 3:15,538,591...15,544,465

Uck2

uridine-cytidine kinase 2

involved_in

IEA
ISS
ISO

GO_REF:0000041
GO_REF:0000024
(PMID:11306702), (PMID:27239701)

UniProt
RGD

PMID:11306702 PMID:27239701

GO_REF:0000024 GO_REF:0000041

NCBI chr13:79,380,807...79,438,352
Ensembl chr13:79,383,846...79,438,352

Uckl1

uridine-cytidine kinase 1-like 1

involved_in

IEA

GO_REF:0000041

UniProt

GO_REF:0000041

NCBI chr 3:168,674,849...168,687,513
Ensembl chr 3:168,674,849...168,698,091

Upp1

uridine phosphorylase 1

involved_in

ISO
IEA

(MGI:3586453|PMID:11956089)
GO_REF:0000041

RGD
UniProt

PMID:11956089

GO_REF:0000041 MGI:3586453

NCBI chr14:83,809,495...83,829,299
Ensembl chr14:83,809,960...83,829,462

Upp2

uridine phosphorylase 2

involved_in

IEA

GO_REF:0000041

UniProt

GO_REF:0000041

NCBI chr 3:43,273,048...43,317,417
Ensembl chr 3:43,273,048...43,317,417

Term paths to the root

Path 1
Term	Annotations
biological_process	19746
metabolic process	12044
cellular metabolic process	9531
cellular metabolic compound salvage	33
pyrimidine-containing compound salvage	6
pyrimidine nucleotide salvage	6
pyrimidine ribonucleotide salvage	6
UMP salvage	6
Path 2
Term	Annotations
biological_process	19746
metabolic process	12044
cellular metabolic process	9531
cellular aromatic compound metabolic process	5843
nucleobase-containing compound metabolic process	5616
nucleobase-containing small molecule metabolic process	569
nucleoside phosphate metabolic process	497
nucleoside phosphate biosynthetic process	268
nucleotide biosynthetic process	263
nucleotide salvage	21
pyrimidine nucleotide salvage	6
pyrimidine ribonucleotide salvage	6
UMP salvage	6

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
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Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

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MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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ONTOLOGY REPORT - ANNOTATIONS