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ONTOLOGY REPORT - ANNOTATIONS


Term:membrane biogenesis
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Accession:GO:0044091 term browser browse the term
Definition:A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a membrane.


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membrane biogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clip3 CAP-Gly domain containing linker protein 3 involved_in ISO (PMID:11854307) UniProt PMID:11854307 NCBI chrNW_004936922:50,230...63,215 JBrowse link
G Serinc1 serine incorporator 1 involved_in ISO PMID:16120614 BHF-UCL PMID:16120614 RGD:8553290 NCBI chrNW_004936802:1,346,565...1,366,817 JBrowse link
caveola assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in
acts_upstream_of_or_within
ISO (PMID:12743374)
(MGI:2176684|PMID:11884617)
(MGI:3629009|PMID:12759260)
(MGI:5607358|PMID:25006397)
(PMID:12633858)
(PMID:25006397)
BHF-UCL
MGI
PMID:11884617 PMID:12633858 PMID:12743374 PMID:12759260 PMID:25006397 MGI:2176684 MGI:3629009 MGI:5607358 NCBI chrNW_004936589:2,504,235...2,536,778 JBrowse link
G Cav2 caveolin 2 involved_in ISO (PMID:12633858)
(PMID:12743374)
BHF-UCL PMID:12633858 PMID:12743374 NCBI chrNW_004936589:2,553,932...2,561,186 JBrowse link
G Cav3 caveolin 3 acts_upstream_of_or_within ISO (MGI:3772152|PMID:18054955)
(PMID:18936328)
MGI PMID:18054955 PMID:18936328 MGI:3772152 NCBI chrNW_004936602:4,264,896...4,278,160 JBrowse link
G Emp2 epithelial membrane protein 2 NOT|involved_in ISO (MGI:3047005|PMID:14978215) UniProt PMID:14978215 MGI:3047005 NCBI chrNW_004936530:8,854,266...8,862,127 JBrowse link
G Pacsin2 protein kinase C and casein kinase substrate in neurons 2 involved_in ISO (PMID:21610094) UniProt PMID:21610094 NCBI chrNW_004936718:739,133...850,775 JBrowse link
clathrin-coated pit assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gak cyclin G associated kinase involved_in ISO (PMID:16155256) ParkinsonsUK-UCL PMID:16155256 NCBI chrNW_004936477:22,254,109...22,300,827 JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in ISO (PMID:16262731) UniProt PMID:16262731 NCBI chrNW_004936498:13,785,638...13,885,931 JBrowse link
cornified envelope assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmkn dermokine acts_upstream_of_or_within ISO (MGI:5603671|PMID:24794495) MGI PMID:24794495 MGI:5603671 NCBI chrNW_004936570:846,229...859,732 JBrowse link
G LOC101976627 prosaposin acts_upstream_of_or_within ISO (MGI:5607491|PMID:24872419) MGI PMID:24872419 MGI:5607491 NCBI chrNW_004936521:6,975,844...7,009,460 JBrowse link
G Stx2 syntaxin 2 involved_in ISO (PMID:22226963) UniProt PMID:22226963 NCBI chrNW_004936660:1,616,774...1,652,585 JBrowse link
G Stx4 syntaxin 4 involved_in ISO (PMID:22226963) UniProt PMID:22226963 NCBI chrNW_004936501:13,401,095...13,408,316 JBrowse link
G Ugcg UDP-glucose ceramide glucosyltransferase involved_in ISO (MGI:5510915|PMID:23748427) UniProt PMID:23748427 MGI:5510915 NCBI chrNW_004936559:1,475,684...1,513,273 JBrowse link
membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank3 ankyrin 3 involved_in ISO (PMID:14757759), (PMID:17620337) BHF-UCL PMID:14757759 PMID:17620337 RGD:8693361 NCBI chrNW_004936614:2,664,594...2,976,174 JBrowse link
G Sptbn1 spectrin beta, non-erythrocytic 1 involved_in ISO (PMID:17620337) BHF-UCL PMID:17620337 NCBI chrNW_004936491:920,830...1,108,374 JBrowse link
G Tlcd1 TLC domain containing 1 involved_in ISO (PMID:30509349) UniProt PMID:30509349 NCBI chrNW_004936538:4,933,920...4,936,574 JBrowse link
membrane raft assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:23861394) UniProt PMID:23861394 NCBI chrNW_004936471:21,274,112...21,329,286 JBrowse link
G Emp2 epithelial membrane protein 2 involved_in ISO (MGI:3047005|PMID:14978215) UniProt PMID:14978215 MGI:3047005 NCBI chrNW_004936530:8,854,266...8,862,127 JBrowse link
G Flot1 flotillin 1 involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chrNW_004936837:387,012...401,076 JBrowse link
G Flot2 flotillin 2 involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chrNW_004936538:5,071,546...5,090,287 JBrowse link
G Rftn1 raftlin, lipid raft linker 1 involved_in ISO (PMID:12805216) UniProt PMID:12805216 NCBI chrNW_004936473:9,119,234...9,317,696 JBrowse link
G S100a10 S100 calcium binding protein A10 involved_in ISO (PMID:23861394) UniProt PMID:23861394 NCBI chrNW_004936580:2,159,582...2,162,832 JBrowse link
mitotic nuclear membrane reassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankle2 ankyrin repeat and LEM domain containing 2 involved_in ISO (PMID:22770216) UniProt PMID:22770216 NCBI chrNW_004936660:2,647,071...2,668,060 JBrowse link
G Reep3 receptor accessory protein 3 involved_in ISO (PMID:23911198) UniProt PMID:23911198 NCBI chrNW_004936753:1,279,979...1,365,288 JBrowse link
G Reep4 receptor accessory protein 4 involved_in ISO (PMID:23911198) UniProt PMID:23911198 NCBI chrNW_004936555:5,958,586...5,962,472 JBrowse link
negative regulation of clathrin-coated pit assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt11 synaptotagmin 11 involved_in ISO PMID:26589353 ParkinsonsUK-UCL PMID:26589353 RGD:11079192 NCBI chrNW_004936580:5,123,196...5,142,976 JBrowse link
neurexin clustering involved in presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISO (MGI:2665153|PMID:12796785) BHF-UCL PMID:12796785 MGI:2665153 NCBI chrNW_004936703:951,935...1,415,991 JBrowse link
neuroligin clustering involved in postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh2 cadherin 2 involved_in ISO (MGI:4457945|PMID:20534458) BHF-UCL PMID:20534458 MGI:4457945 NCBI chrNW_004936550:6,885,484...7,067,001 JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO (MGI:4457945|PMID:20534458) BHF-UCL PMID:20534458 MGI:4457945 NCBI chrNW_004936479:21,373,917...22,062,498 JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 MGI:5284797 MGI:5285129 NCBI chrNW_004936508:1,889,640...2,954,039 JBrowse link
G Nrxn2 neurexin 2 involved_in ISO (MGI:5285129|PMID:21424692) BHF-UCL PMID:21424692 MGI:5285129 NCBI chrNW_004936599:4,592,411...4,692,866 JBrowse link
nuclear membrane reassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp2a charged multivesicular body protein 2A involved_in ISO (PMID:26040712) UniProt PMID:26040712 NCBI chrNW_004937062:133,361...136,329 JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:26040712) UniProt PMID:26040712 NCBI chrNW_004936561:6,756,360...6,798,964 JBrowse link
G Chmp7 charged multivesicular body protein 7 involved_in ISO (PMID:26040712) UniProt PMID:26040712 NCBI chrNW_004936555:6,730,284...6,757,816 JBrowse link
G Emd emerin ISO RGD PMID:10569247 RGD:1342448 NCBI chrNW_004936809:1,127,701...1,130,195 JBrowse link
G Spast spastin involved_in ISO (PMID:26040712) UniProt PMID:26040712 NCBI chrNW_004936493:1,283,754...1,342,592 JBrowse link
peroxisome membrane biogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pex11a peroxisomal biogenesis factor 11 alpha ISO RGD PMID:9548716 RGD:633614 NCBI chrNW_004936483:15,474,484...15,480,527 JBrowse link
G Pex16 peroxisomal biogenesis factor 16 involved_in ISO (PMID:12223482), (PMID:9837814) UniProt PMID:9837814 PMID:12223482 NCBI chrNW_004936562:3,103,332...3,109,884 JBrowse link
G Pex19 peroxisomal biogenesis factor 19 involved_in ISO (PMID:10051604) UniProt PMID:10051604 NCBI chrNW_004936740:351,089...357,657 JBrowse link
G Pex3 peroxisomal biogenesis factor 3 ISO RGD PMID:10848631 RGD:633588 NCBI chrNW_004936625:2,657,511...2,694,668 JBrowse link
plasma membrane raft assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flot1 flotillin 1 involved_in ISO (PMID:21399631) UniProt PMID:21399631 NCBI chrNW_004936837:387,012...401,076 JBrowse link
postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephb2 EPH receptor B2 involved_in ISO PMID:11136979 SynGO PMID:11136979 RGD:13702452 NCBI chrNW_004936474:8,109,800...8,203,106 JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISO (MGI:5295488|PMID:22038977) UniProt PMID:22038977 MGI:5295488 NCBI chrNW_004936562:2,211,519...2,262,899 JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (MGI:2665153|PMID:12796785), (MGI:5284797|PMID:15620359) BHF-UCL PMID:12796785 PMID:15620359 MGI:2665153 MGI:5284797 NCBI chrNW_004936703:951,935...1,415,991 JBrowse link
G Nlgn2 neuroligin 2 involved_in ISO (MGI:5284797|PMID:15620359) BHF-UCL PMID:15620359 MGI:5284797 NCBI chrNW_004936595:692,340...704,650 JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO (MGI:5320268|PMID:21642956) BHF-UCL PMID:21642956 MGI:5320268 NCBI chrNW_004936762:435,729...458,261 JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 MGI:5284797 MGI:5285129 NCBI chrNW_004936508:1,889,640...2,954,039 JBrowse link
G Nrxn2 neurexin 2 involved_in ISO (MGI:5285129|PMID:21424692) BHF-UCL PMID:21424692 MGI:5285129 NCBI chrNW_004936599:4,592,411...4,692,866 JBrowse link
presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il1rapl1 interleukin 1 receptor accessory protein like 1 involved_in ISO (MGI:5294265|PMID:21940441) CACAO PMID:21940441 MGI:5294265 NCBI chrNW_004936553:5,063,042...5,824,427 JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISO (MGI:5295488|PMID:22038977) UniProt PMID:22038977 MGI:5295488 NCBI chrNW_004936562:2,211,519...2,262,899 JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO PMID:19730411
(MGI:2665153|PMID:12796785), (MGI:3694190|PMID:10892652), (MGI:5284797|PMID:15620359)
PMID:15797875
BHF-UCL PMID:10892652 PMID:12796785 PMID:15620359 PMID:15797875 PMID:19730411 MGI:2665153 MGI:3694190 MGI:5284797 RGD:8554205 RGD:8554379 NCBI chrNW_004936703:951,935...1,415,991 JBrowse link
G Nlgn2 neuroligin 2 involved_in ISO PMID:15797875
(MGI:4352827|PMID:19016888)
(MGI:5284797|PMID:15620359)
BHF-UCL PMID:15620359 PMID:15797875 PMID:19016888 MGI:4352827 MGI:5284797 RGD:8554205 NCBI chrNW_004936595:692,340...704,650 JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chrNW_004936762:435,729...458,261 JBrowse link
G Nlgn4x neuroligin 4 X-linked involved_in ISO (PMID:19726642) BHF-UCL PMID:19726642 NCBI chrNW_004936644:1,616,704...1,782,377 JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:2665153|PMID:12796785) BHF-UCL PMID:12796785 MGI:2665153 NCBI chrNW_004936508:1,889,640...2,954,039 JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3772418|PMID:18082964) CACAO PMID:18082964 MGI:3772418 NCBI chrNW_004936735:1,252,414...1,338,318 JBrowse link
G Ptprd protein tyrosine phosphatase receptor type D involved_in ISO (MGI:5294265|PMID:21940441) BHF-UCL PMID:21940441 MGI:5294265 NCBI chrNW_004936539:2,564,815...3,369,975 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12173
    cellular process 11372
      cellular component organization or biogenesis 4860
        cellular component biogenesis 2385
          membrane biogenesis 48
            membrane assembly + 42
            membrane macromolecule biosynthetic process 0
            nuclear membrane biogenesis + 0
            peroxisome membrane biogenesis 4
            rhabdomere membrane biogenesis 0
paths to the root