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ONTOLOGY REPORT - ANNOTATIONS


Term:membrane biogenesis
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Accession:GO:0044091 term browser browse the term
Definition:A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a membrane.



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membrane biogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLIP3 CAP-Gly domain containing linker protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:116,657,613...116,670,738
Ensembl chr 1:116,657,657...116,669,667
JBrowse link
G EXOC4 exocyst complex component 4 ISO RGD PMID:16478790 RGD:2314419 NCBI chr14:3,334,286...4,077,478
Ensembl chr14:3,334,220...4,077,411
JBrowse link
G SERINC1 serine incorporator 1 involved_in ISO PMID:16120614 BHF-UCL PMID:16120614 RGD:8553290 NCBI chr 1:61,813,404...61,845,345
Ensembl chr 1:61,739,224...61,845,296
JBrowse link
caveola assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV1 caveolin 1 involved_in
acts_upstream_of_or_within
IDA
ISO
IBA
(PMID:12743374)
(MGI:3629009|PMID:12759260)
(MGI:2176684|PMID:11884617)
(PMID:21873635)
BHF-UCL
MGI
GO_Central
PMID:11884617 PMID:12743374 PMID:12759260 PMID:21873635 MGI:2176684 MGI:3629009 NCBI chr14:55,458,934...55,494,563
Ensembl chr14:55,461,048...55,492,935
JBrowse link
G CAV2 caveolin 2 involved_in ISS
IBA
(PMID:12633858)
(PMID:21873635)
UniProt
GO_Central
PMID:12633858 PMID:21873635 NCBI chr14:55,437,622...55,445,481
Ensembl chr14:55,437,622...55,445,469
JBrowse link
G CAV3 caveolin 3 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(PMID:18936328)
(MGI:3772152|PMID:18054955)
GO_Central
MGI
PMID:18054955 PMID:18936328 PMID:21873635 MGI:3772152 NCBI chr20:9,384,901...9,398,055
Ensembl chr20:9,384,901...9,401,196
JBrowse link
G EMP2 epithelial membrane protein 2 NOT|involved_in ISO (MGI:3047005|PMID:14978215) UniProt PMID:14978215 MGI:3047005 NCBI chr 6:32,026,908...32,060,447
Ensembl chr 6:32,026,916...32,057,693
JBrowse link
G PACSIN2 protein kinase C and casein kinase substrate in neurons 2 involved_in ISO (PMID:21610094) UniProt PMID:21610094 NCBI chr10:22,512,058...22,648,553
Ensembl chr10:22,512,077...22,647,322
JBrowse link
clathrin-coated pit assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAK cyclin G associated kinase involved_in ISO (PMID:16155256) ParkinsonsUK-UCL PMID:16155256 NCBI chr 3:91,575,537...91,630,715
Ensembl chr 3:91,574,751...91,630,663
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein involved_in ISO (PMID:16262731) UniProt PMID:16262731 NCBI chr21:13,437,819...13,540,167
Ensembl chr21:13,437,925...13,539,616
JBrowse link
cornified envelope assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DMKN dermokine acts_upstream_of_or_within ISO (MGI:5603671|PMID:24794495) MGI PMID:24794495 MGI:5603671 NCBI chr 1:117,144,605...117,158,116
Ensembl chr 1:117,144,627...117,158,027
JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (MGI:5607491|PMID:24872419) MGI PMID:24872419 MGI:5607491 NCBI chr 4:22,571,095...22,603,880
Ensembl chr 4:22,572,153...22,603,848
JBrowse link
G STX2 syntaxin 2 involved_in ISO (PMID:22226963) UniProt PMID:22226963 NCBI chr26:1,459,110...1,494,801
Ensembl chr26:1,454,189...1,494,823
JBrowse link
G STX4 syntaxin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:17,184,044...17,189,481
Ensembl chr 6:17,184,399...17,189,370
JBrowse link
G UGCG UDP-glucose ceramide glucosyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:66,439,346...66,472,897
Ensembl chr11:66,439,346...66,472,897
JBrowse link
membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK3 ankyrin 3 involved_in ISO (PMID:14757759), (PMID:17620337) BHF-UCL PMID:14757759 PMID:17620337 RGD:8693361 NCBI chr 4:12,166,275...12,827,175
Ensembl chr 4:12,167,550...12,827,037
JBrowse link
G SPTBN1 spectrin beta, non-erythrocytic 1 involved_in ISO (PMID:17620337) BHF-UCL PMID:17620337 NCBI chr10:55,429,989...55,571,917
Ensembl chr10:55,429,940...55,571,916
JBrowse link
G TLCD1 TLC domain containing 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:42,918,932...42,921,098
Ensembl chr 9:42,919,196...42,920,913
JBrowse link
G TLCD2 TLC domain containing 2 involved_in ISO (PMID:30509349) UniProt PMID:30509349 NCBI chr 9:45,845,870...45,849,413
Ensembl chr 9:45,845,294...45,848,583
JBrowse link
membrane raft assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 involved_in ISO (PMID:23861394) UniProt PMID:23861394 NCBI chr30:25,176,845...25,210,244
Ensembl chr30:25,115,842...25,218,281
JBrowse link
G DHRS13 dehydrogenase/reductase 13 involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chr 9:43,050,929...43,066,886
Ensembl chr 9:43,052,114...43,071,742
JBrowse link
G EMP2 epithelial membrane protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:32,026,908...32,060,447
Ensembl chr 6:32,026,916...32,057,693
JBrowse link
G FLOT1 flotillin 1 involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chr12:517,941...528,677
Ensembl chr12:516,032...528,637
JBrowse link
G RFTN1 raftlin, lipid raft linker 1 involved_in ISO (PMID:12805216) UniProt PMID:12805216 NCBI chr23:26,272,103...26,472,610
Ensembl chr23:26,282,392...26,472,536
JBrowse link
G S100A10 S100 calcium binding protein A10 involved_in ISO (PMID:23861394) UniProt PMID:23861394 NCBI chr17:60,984,138...60,994,915 JBrowse link
mitotic nuclear membrane reassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKLE2 ankyrin repeat and LEM domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:379,443...405,101
Ensembl chr26:379,346...403,474
JBrowse link
G REEP3 receptor accessory protein 3 involved_in ISO (PMID:23911198) UniProt PMID:23911198 NCBI chr 4:15,369,720...15,426,661
Ensembl chr 4:15,373,333...15,423,354
JBrowse link
G REEP4 receptor accessory protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:35,109,210...35,113,152
Ensembl chr25:35,109,236...35,117,048
JBrowse link
negative regulation of clathrin-coated pit assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SYT11 synaptotagmin 11 involved_in ISO PMID:26589353 ParkinsonsUK-UCL PMID:26589353 RGD:11079192 NCBI chr 7:41,910,102...41,929,020
Ensembl chr 7:41,912,920...41,929,617
JBrowse link
neurexin clustering involved in presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN1 neuroligin 1 involved_in ISO (MGI:2665153|PMID:12796785) BHF-UCL PMID:12796785 MGI:2665153 NCBI chr34:37,397,772...38,203,634
Ensembl chr34:37,572,629...38,203,177
JBrowse link
neuroligin clustering involved in postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDH2 cadherin 2 involved_in ISO (MGI:4457945|PMID:20534458) BHF-UCL PMID:20534458 MGI:4457945 NCBI chr 7:60,736,760...60,950,477
Ensembl chr 7:60,736,760...60,951,034
JBrowse link
G MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO (MGI:4457945|PMID:20534458) BHF-UCL PMID:20534458 MGI:4457945 NCBI chr18:17,973,058...19,098,785
Ensembl chr18:17,918,928...18,930,059
JBrowse link
G NRXN1 neurexin 1 involved_in ISO (MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 MGI:5284797 MGI:5285129 NCBI chr10:51,555,660...52,666,774
Ensembl chr10:51,558,452...52,667,569
JBrowse link
G NRXN2 neurexin 2 involved_in ISO (MGI:5285129|PMID:21424692) BHF-UCL PMID:21424692 MGI:5285129 NCBI chr18:52,439,836...52,537,577
Ensembl chr18:52,439,230...52,536,401
JBrowse link
nuclear membrane reassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP2A charged multivesicular body protein 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:99,405,322...99,408,257
Ensembl chr 1:99,405,337...99,410,163
JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:22,995,677...23,050,084
Ensembl chr24:22,995,672...23,049,287
JBrowse link
G CHMP7 charged multivesicular body protein 7 involved_in ISO (PMID:26040712) UniProt PMID:26040712 NCBI chr25:34,242,671...34,257,268
Ensembl chr25:34,244,022...34,257,211
JBrowse link
G EMD emerin ISO RGD PMID:10569247 RGD:1342448 NCBI chr  X:122,050,309...122,052,629
Ensembl chr  X:122,050,455...122,052,524
JBrowse link
G NSFL1C NSFL1 cofactor involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:19,575,543...19,599,002
Ensembl chr24:19,575,580...19,597,653
JBrowse link
G SPAST spastin involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:25,393,169...25,447,686
Ensembl chr17:25,393,422...25,446,539
JBrowse link
G UBXN2A UBX domain protein 2A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:18,446,856...18,491,797
Ensembl chr17:18,408,251...18,505,676
JBrowse link
G UBXN2B UBX domain protein 2B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr29:9,229,070...9,258,269
Ensembl chr29:9,228,985...9,259,372
JBrowse link
peroxisome membrane biogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PEX11A peroxisomal biogenesis factor 11 alpha ISO RGD PMID:9548716 RGD:633614 NCBI chr 3:52,674,363...52,684,776
Ensembl chr 3:52,674,348...52,684,660
JBrowse link
G PEX16 peroxisomal biogenesis factor 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:43,506,531...43,513,735
Ensembl chr18:43,507,193...43,516,235
JBrowse link
G PEX19 peroxisomal biogenesis factor 19 involved_in ISO (PMID:10051604) UniProt PMID:10051604 NCBI chr38:21,939,054...21,945,281
Ensembl chr38:21,939,018...21,944,602
JBrowse link
G PEX3 peroxisomal biogenesis factor 3 ISO RGD PMID:10848631 RGD:633588 NCBI chr 1:34,994,092...35,030,453
Ensembl chr 1:34,994,197...35,023,975
JBrowse link
plasma membrane raft assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLOT1 flotillin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:517,941...528,677
Ensembl chr12:516,032...528,637
JBrowse link
postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPHB2 EPH receptor B2 involved_in ISO PMID:11136979 SynGO PMID:11136979 RGD:13702452 NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786
JBrowse link
G LRP4 LDL receptor related protein 4 involved_in ISO (MGI:5295488|PMID:22038977) UniProt PMID:22038977 MGI:5295488 NCBI chr18:42,616,683...42,667,297
Ensembl chr18:42,616,426...42,665,794
JBrowse link
G NLGN1 neuroligin 1 involved_in ISO (MGI:2665153|PMID:12796785), (MGI:5284797|PMID:15620359) BHF-UCL PMID:12796785 PMID:15620359 MGI:2665153 MGI:5284797 NCBI chr34:37,397,772...38,203,634
Ensembl chr34:37,572,629...38,203,177
JBrowse link
G NLGN2 neuroligin 2 involved_in ISO (MGI:5284797|PMID:15620359) BHF-UCL PMID:15620359 MGI:5284797 NCBI chr 5:32,338,602...32,351,546
Ensembl chr 5:32,340,335...32,352,412
JBrowse link
G NLGN3 neuroligin 3 involved_in ISO (MGI:5320268|PMID:21642956) BHF-UCL PMID:21642956 MGI:5320268 NCBI chr  X:55,510,729...55,532,396
Ensembl chr  X:55,513,626...55,531,371
JBrowse link
G NLGN4X neuroligin 4 X-linked involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:3,409,529...3,708,234 JBrowse link
G NRXN1 neurexin 1 involved_in ISO (MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 MGI:5284797 MGI:5285129 NCBI chr10:51,555,660...52,666,774
Ensembl chr10:51,558,452...52,667,569
JBrowse link
G NRXN2 neurexin 2 involved_in ISO (MGI:5285129|PMID:21424692) BHF-UCL PMID:21424692 MGI:5285129 NCBI chr18:52,439,836...52,537,577
Ensembl chr18:52,439,230...52,536,401
JBrowse link
presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL1RAPL1 interleukin 1 receptor accessory protein like 1 involved_in ISO (MGI:5294265|PMID:21940441) CACAO PMID:21940441 MGI:5294265 NCBI chr  X:23,747,689...25,105,606
Ensembl chr  X:23,943,871...25,099,377
JBrowse link
G LRP4 LDL receptor related protein 4 involved_in ISO (MGI:5295488|PMID:22038977) UniProt PMID:22038977 MGI:5295488 NCBI chr18:42,616,683...42,667,297
Ensembl chr18:42,616,426...42,665,794
JBrowse link
G NLGN1 neuroligin 1 involved_in ISO (MGI:2665153|PMID:12796785), (MGI:3694190|PMID:10892652), (MGI:5284797|PMID:15620359)
PMID:19730411
PMID:15797875
BHF-UCL PMID:10892652 PMID:12796785 PMID:15620359 PMID:15797875 PMID:19730411 MGI:2665153 MGI:3694190 MGI:5284797 RGD:8554205 RGD:8554379 NCBI chr34:37,397,772...38,203,634
Ensembl chr34:37,572,629...38,203,177
JBrowse link
G NLGN2 neuroligin 2 involved_in ISO (MGI:4352827|PMID:19016888)
PMID:15797875
(MGI:5284797|PMID:15620359)
BHF-UCL PMID:15620359 PMID:15797875 PMID:19016888 MGI:4352827 MGI:5284797 RGD:8554205 NCBI chr 5:32,338,602...32,351,546
Ensembl chr 5:32,340,335...32,352,412
JBrowse link
G NLGN3 neuroligin 3 involved_in ISO PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr  X:55,510,729...55,532,396
Ensembl chr  X:55,513,626...55,531,371
JBrowse link
G NLGN4X neuroligin 4 X-linked involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:3,409,529...3,708,234 JBrowse link
G NRXN1 neurexin 1 involved_in ISO (MGI:2665153|PMID:12796785) BHF-UCL PMID:12796785 MGI:2665153 NCBI chr10:51,555,660...52,666,774
Ensembl chr10:51,558,452...52,667,569
JBrowse link
G PTEN phosphatase and tensin homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176
JBrowse link
G PTPRD protein tyrosine phosphatase receptor type D involved_in ISO (MGI:5294265|PMID:21940441) CACAO PMID:21940441 MGI:5294265 NCBI chr11:29,100,913...31,278,495
Ensembl chr11:29,104,448...29,501,600
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 13874
    cellular process 13118
      cellular component organization or biogenesis 5398
        cellular component biogenesis 2674
          membrane biogenesis 53
            membrane assembly + 46
            membrane macromolecule biosynthetic process 0
            nuclear membrane biogenesis + 0
            peroxisome membrane biogenesis 4
            rhabdomere membrane biogenesis 0
paths to the root