Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:membrane biogenesis
go back to main search page
Accession:GO:0044091 term browser browse the term
Definition:A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a membrane.



show annotations for term's descendants           Sort by:
 
membrane biogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLIP3 CAP-Gly domain containing linker protein 3 involved_in ISO (PMID:11854307) UniProt PMID:11854307 NCBI chr19:32,932,915...32,951,047
Ensembl chr19:41,681,432...41,699,680
JBrowse link
G EXOC4 exocyst complex component 4 ISO RGD PMID:16478790 RGD:2314419 NCBI chr 7:125,226,107...126,030,486
Ensembl chr 7:137,734,400...138,536,214
JBrowse link
G SERINC1 serine incorporator 1 involved_in ISO PMID:16120614 BHF-UCL PMID:16120614 RGD:8553290 NCBI chr 6:120,231,789...120,260,355
Ensembl chr 6:124,356,204...124,384,659
JBrowse link
caveola assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV1 caveolin 1 involved_in
acts_upstream_of_or_within
ISO (PMID:12633858)
(MGI:5607358|PMID:25006397)
(MGI:2176684|PMID:11884617)
(MGI:3629009|PMID:12759260)
(PMID:12743374)
(PMID:25006397)
BHF-UCL
MGI
PMID:11884617 PMID:12633858 PMID:12743374 PMID:12759260 PMID:25006397 MGI:2176684 MGI:3629009 MGI:5607358 NCBI chr 7:108,497,125...108,533,090
Ensembl chr 7:121,193,424...121,229,655
JBrowse link
G CAV2 caveolin 2 involved_in ISO (PMID:12743374)
(PMID:12633858)
BHF-UCL PMID:12633858 PMID:12743374 NCBI chr 7:108,254,074...108,480,716
Ensembl chr 7:121,168,579...121,177,415
JBrowse link
G CAV3 caveolin 3 acts_upstream_of_or_within ISO (MGI:3772152|PMID:18054955)
(PMID:18936328)
MGI PMID:18054955 PMID:18936328 MGI:3772152 NCBI chr 3:8,684,829...8,697,731
Ensembl chr 3:8,928,069...8,940,942
JBrowse link
G EMP2 epithelial membrane protein 2 NOT|involved_in ISO (MGI:3047005|PMID:14978215) UniProt PMID:14978215 MGI:3047005 NCBI chr16:9,465,589...9,517,593
Ensembl chr16:10,694,425...10,744,744
JBrowse link
G PACSIN2 protein kinase C and casein kinase substrate in neurons 2 involved_in ISO (PMID:21610094) UniProt PMID:21610094 NCBI chr22:23,757,565...23,900,837
Ensembl chr22:41,908,922...41,999,692
JBrowse link
clathrin-coated pit assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAK cyclin G associated kinase involved_in ISO (PMID:16155256) ParkinsonsUK-UCL PMID:16155256 NCBI chr 4:952,474...1,049,612
Ensembl chr 4:883,096...967,473
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein involved_in ISO (PMID:16262731) UniProt PMID:16262731 NCBI chr11:81,011,324...81,122,352
Ensembl chr11:84,619,241...84,730,684
JBrowse link
cornified envelope assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DMKN dermokine acts_upstream_of_or_within ISO (MGI:5603671|PMID:24794495) MGI PMID:24794495 MGI:5603671 NCBI chr19:32,443,920...32,460,473 JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (MGI:5607491|PMID:24872419) MGI PMID:24872419 MGI:5607491 NCBI chr10:68,286,359...68,321,349
Ensembl chr10:70,810,881...70,828,781
JBrowse link
G STX2 syntaxin 2 involved_in ISO (PMID:22226963) UniProt PMID:22226963 NCBI chr12:128,416,793...128,464,452
Ensembl chr12:132,614,793...132,650,559
JBrowse link
G STX4 syntaxin 4 involved_in ISO (PMID:22226963) UniProt PMID:22226963 NCBI chr16:23,917,576...23,933,884
Ensembl chr16:31,400,915...31,411,364
JBrowse link
G UGCG UDP-glucose ceramide glucosyltransferase involved_in ISO (MGI:5510915|PMID:23748427) UniProt PMID:23748427 MGI:5510915 NCBI chr 9:83,024,602...83,065,017
Ensembl chr 9:111,184,478...111,222,613
JBrowse link
membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANK3 ankyrin 3 involved_in ISO (PMID:14757759), (PMID:17620337) BHF-UCL PMID:14757759 PMID:17620337 RGD:8693361 NCBI chr10:56,560,589...57,269,952
Ensembl chr10:58,790,696...59,602,954
JBrowse link
G SPTBN1 spectrin beta, non-erythrocytic 1 involved_in ISO (PMID:17620337) BHF-UCL PMID:17620337 NCBI chr2A:54,608,711...54,816,083
Ensembl chr2A:55,822,415...55,961,925
JBrowse link
G TLCD1 TLC domain containing 1 involved_in ISO (PMID:30509349) UniProt PMID:30509349 NCBI chr17:28,048,407...28,051,086
Ensembl chr17:28,551,715...28,556,113
JBrowse link
G TLCD2 TLC domain containing 2 involved_in ISO (PMID:30509349) UniProt PMID:30509349 NCBI chr17:1,689,536...1,692,855
Ensembl chr17:1,585,185...1,587,671
JBrowse link
membrane raft assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 involved_in ISO (PMID:23861394) UniProt PMID:23861394 NCBI chr15:39,322,303...39,371,565
Ensembl chr15:57,625,425...57,674,250
JBrowse link
G EMP2 epithelial membrane protein 2 involved_in ISO (MGI:3047005|PMID:14978215) UniProt PMID:14978215 MGI:3047005 NCBI chr16:9,465,589...9,517,593
Ensembl chr16:10,694,425...10,744,744
JBrowse link
G FLOT1 flotillin 1 involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chr 6:30,472,839...30,487,809
Ensembl chr 6:31,342,033...31,357,559
JBrowse link
G FLOT2 flotillin 2 involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chr17:27,876,424...27,894,836
Ensembl chr17:28,385,191...28,405,585
JBrowse link
G RFTN1 raftlin, lipid raft linker 1 involved_in ISO (PMID:12805216) UniProt PMID:12805216 NCBI chr 3:16,241,255...16,441,402
Ensembl chr 3:16,578,092...16,778,464
JBrowse link
G S100A10 S100 calcium binding protein A10 involved_in ISO (PMID:23861394) UniProt PMID:23861394 NCBI chr 1:127,341,974...127,353,054
Ensembl chr 1:130,985,312...130,995,130
JBrowse link
mitotic nuclear membrane reassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKLE2 ankyrin repeat and LEM domain containing 2 involved_in ISO (PMID:22770216) UniProt PMID:22770216 NCBI chr12:130,091,476...130,123,533
Ensembl chr12:134,805,830...134,835,140
JBrowse link
G REEP3 receptor accessory protein 3 involved_in ISO (PMID:23911198) UniProt PMID:23911198 NCBI chr10:60,028,052...60,133,363
Ensembl chr10:62,351,045...62,454,931
JBrowse link
G REEP4 receptor accessory protein 4 involved_in ISO (PMID:23911198) UniProt PMID:23911198 NCBI chr 8:21,382,943...21,386,871
Ensembl chr 8:18,322,302...18,326,212
JBrowse link
negative regulation of clathrin-coated pit assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SYT11 synaptotagmin 11 involved_in ISO PMID:26589353 ParkinsonsUK-UCL PMID:26589353 RGD:11079192 NCBI chr 1:131,193,999...131,218,752
Ensembl chr 1:135,026,032...135,046,943
JBrowse link
neurexin clustering involved in presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN1 neuroligin 1 involved_in ISO (MGI:2665153|PMID:12796785) BHF-UCL PMID:12796785 MGI:2665153 NCBI chr 3:170,416,885...171,333,094
Ensembl chr 3:178,810,253...179,503,756
JBrowse link
neuroligin clustering involved in postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDH2 cadherin 2 involved_in ISO (MGI:4457945|PMID:20534458) BHF-UCL PMID:20534458 MGI:4457945 NCBI chr18:21,210,001...21,435,919
Ensembl chr18:24,812,019...25,008,325
JBrowse link
G MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO (MGI:4457945|PMID:20534458) BHF-UCL PMID:20534458 MGI:4457945 NCBI chr 7:69,943,704...71,395,176
Ensembl chr 7:83,758,512...84,760,872
JBrowse link
G NRXN1 neurexin 1 involved_in ISO (MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 MGI:5284797 MGI:5285129 NCBI chr2A:50,063,398...51,178,659
Ensembl chr2A:50,985,067...52,091,277
JBrowse link
G NRXN2 neurexin 2 involved_in ISO (MGI:5285129|PMID:21424692) BHF-UCL PMID:21424692 MGI:5285129 NCBI chr11:59,959,917...60,078,093
Ensembl chr11:63,303,659...63,409,687
JBrowse link
nuclear membrane reassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP2A charged multivesicular body protein 2A involved_in ISO (PMID:26040712) UniProt PMID:26040712 NCBI chr19:55,564,622...55,568,214
Ensembl chr19:64,377,986...64,381,417
JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in ISO (PMID:26040712) UniProt PMID:26040712 NCBI chr20:30,098,796...30,146,347
Ensembl chr20:31,236,778...31,285,264
JBrowse link
G CHMP7 charged multivesicular body protein 7 involved_in ISO (PMID:26040712) UniProt PMID:26040712 NCBI chr 8:22,497,479...22,513,005
Ensembl chr 8:19,434,829...19,450,221
JBrowse link
G EMD emerin ISO RGD PMID:10569247 RGD:1342448 NCBI chr  X:143,792,178...143,794,530 JBrowse link
G SPAST spastin involved_in ISO (PMID:26040712) UniProt PMID:26040712 NCBI chr2A:32,085,245...32,175,137
Ensembl chr2A:32,150,792...32,885,029
JBrowse link
peroxisome membrane biogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PEX11A peroxisomal biogenesis factor 11 alpha ISO RGD PMID:9548716 RGD:633614 NCBI chr15:68,375,201...68,384,440
Ensembl chr15:87,581,564...87,590,684
JBrowse link
G PEX16 peroxisomal biogenesis factor 16 involved_in ISO (PMID:12223482), (PMID:9837814) UniProt PMID:9837814 PMID:12223482 NCBI chr11:45,864,220...45,872,263
Ensembl chr11:46,355,950...46,364,543
JBrowse link
G PEX19 peroxisomal biogenesis factor 19 involved_in ISO (PMID:10051604) UniProt PMID:10051604 NCBI chr 1:135,630,788...135,639,126
Ensembl chr 1:139,551,681...139,559,954
JBrowse link
G PEX3 peroxisomal biogenesis factor 3 ISO RGD PMID:10848631 RGD:633588 NCBI chr 6:141,226,738...141,266,233
Ensembl chr 6:145,947,954...145,987,188
JBrowse link
plasma membrane raft assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLOT1 flotillin 1 involved_in ISO (PMID:21399631) UniProt PMID:21399631 NCBI chr 6:30,472,839...30,487,809
Ensembl chr 6:31,342,033...31,357,559
JBrowse link
postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPHB2 EPH receptor B2 involved_in ISO PMID:11136979 SynGO PMID:11136979 RGD:13702452 NCBI chr 1:21,895,961...22,107,649
Ensembl chr 1:22,912,570...23,047,118
JBrowse link
G LRP4 LDL receptor related protein 4 involved_in ISO (MGI:5295488|PMID:22038977) UniProt PMID:22038977 MGI:5295488 NCBI chr11:46,808,090...46,868,649
Ensembl chr11:47,366,321...47,411,105
JBrowse link
G NLGN1 neuroligin 1 involved_in ISO (MGI:2665153|PMID:12796785), (MGI:5284797|PMID:15620359) BHF-UCL PMID:12796785 PMID:15620359 MGI:2665153 MGI:5284797 NCBI chr 3:170,416,885...171,333,094
Ensembl chr 3:178,810,253...179,503,756
JBrowse link
G NLGN2 neuroligin 2 involved_in ISO (MGI:5284797|PMID:15620359) BHF-UCL PMID:15620359 MGI:5284797 NCBI chr17:7,438,853...7,454,014 JBrowse link
G NLGN3 neuroligin 3 involved_in ISO (MGI:5320268|PMID:21642956) BHF-UCL PMID:21642956 MGI:5320268 NCBI chr  X:60,413,098...60,439,359
Ensembl chr  X:70,469,764...70,496,526
JBrowse link
G NRXN1 neurexin 1 involved_in ISO (MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 MGI:5284797 MGI:5285129 NCBI chr2A:50,063,398...51,178,659
Ensembl chr2A:50,985,067...52,091,277
JBrowse link
G NRXN2 neurexin 2 involved_in ISO (MGI:5285129|PMID:21424692) BHF-UCL PMID:21424692 MGI:5285129 NCBI chr11:59,959,917...60,078,093
Ensembl chr11:63,303,659...63,409,687
JBrowse link
presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IL1RAPL1 interleukin 1 receptor accessory protein like 1 involved_in ISO (MGI:5294265|PMID:21940441) CACAO PMID:21940441 MGI:5294265 NCBI chr  X:21,180,693...22,548,122
Ensembl chr  X:28,950,521...30,109,286
JBrowse link
G LRP4 LDL receptor related protein 4 involved_in ISO (MGI:5295488|PMID:22038977) UniProt PMID:22038977 MGI:5295488 NCBI chr11:46,808,090...46,868,649
Ensembl chr11:47,366,321...47,411,105
JBrowse link
G NLGN1 neuroligin 1 involved_in ISO PMID:19730411
(MGI:2665153|PMID:12796785), (MGI:3694190|PMID:10892652), (MGI:5284797|PMID:15620359)
PMID:15797875
BHF-UCL PMID:10892652 PMID:12796785 PMID:15620359 PMID:15797875 PMID:19730411 MGI:2665153 MGI:3694190 MGI:5284797 RGD:8554205 RGD:8554379 NCBI chr 3:170,416,885...171,333,094
Ensembl chr 3:178,810,253...179,503,756
JBrowse link
G NLGN2 neuroligin 2 involved_in ISO PMID:15797875
(MGI:4352827|PMID:19016888)
(MGI:5284797|PMID:15620359)
BHF-UCL PMID:15620359 PMID:15797875 PMID:19016888 MGI:4352827 MGI:5284797 RGD:8554205 NCBI chr17:7,438,853...7,454,014 JBrowse link
G NLGN3 neuroligin 3 involved_in ISO PMID:15797875 BHF-UCL PMID:15797875 RGD:8554205 NCBI chr  X:60,413,098...60,439,359
Ensembl chr  X:70,469,764...70,496,526
JBrowse link
G NLGN4X neuroligin 4 X-linked involved_in ISO (PMID:19726642) BHF-UCL PMID:19726642 Ensembl chr  X:5,756,699...6,018,008 JBrowse link
G NRXN1 neurexin 1 involved_in ISO (MGI:2665153|PMID:12796785) BHF-UCL PMID:12796785 MGI:2665153 NCBI chr2A:50,063,398...51,178,659
Ensembl chr2A:50,985,067...52,091,277
JBrowse link
G PTEN phosphatase and tensin homolog involved_in ISO (MGI:3772418|PMID:18082964) CACAO PMID:18082964 MGI:3772418 NCBI chr10:84,587,841...84,689,043
Ensembl chr10:88,093,539...88,194,605
JBrowse link
G PTPRD protein tyrosine phosphatase receptor type D involved_in ISO (MGI:5294265|PMID:21940441) CACAO PMID:21940441 MGI:5294265 NCBI chr 9:8,113,171...10,420,732
Ensembl chr 9:8,288,569...8,831,227
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12659
    cellular process 11795
      cellular component organization or biogenesis 4933
        cellular component biogenesis 2412
          membrane biogenesis 50
            membrane assembly + 43
            membrane macromolecule biosynthetic process 0
            nuclear membrane biogenesis + 0
            peroxisome membrane biogenesis 4
            rhabdomere membrane biogenesis 0
paths to the root