ONTOLOGY REPORT - ANNOTATIONS
Term: positive regulation of vacuole organization
Accession: GO:0044090
browse the term
Definition: Any process that activates or increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a vacuole.
Synonyms: exact_synonym: positive regulation of vacuole organisation
related_synonym: positive regulation of vacuole biogenesis
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Anxa2
annexin A2
involved_in
ISO
(PMID:25139904)
RGD
PMID:25139904
NCBI chr 8:78,986,252...79,022,638
Ensembl chr 8:78,986,242...79,022,631
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Elapor1
endosome-lysosome associated apoptosis and autophagy regulator 1
involved_in
ISO IEA IBA
(PMID:21072319) GO_REF:0000107 GO_REF:0000033
RGD Ensembl GO_Central
PMID:21072319
GO_REF:0000033 GO_REF:0000107
NCBI chr 2:198,777,323...198,856,497
Ensembl chr 2:198,777,323...198,856,497
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Atg2a
autophagy related 2A
involved_in
ISO IEA
(PMID:30952800), (PMID:31271352) GO_REF:0000107
RGD Ensembl
PMID:30952800 PMID:31271352
GO_REF:0000107
NCBI chr 1:203,542,559...203,562,242
Ensembl chr 1:212,971,844...212,991,528
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Atg7
autophagy related 7
IMP
RGD
PMID:33372336
RGD:407571673
NCBI chr 4:149,390,000...149,597,534
Ensembl chr 4:149,391,390...149,598,319
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Atm
ATM serine/threonine kinase
acts_upstream_of_or_within
ISO
(PMID:37943659)
RGD
PMID:37943659
NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:62,727,291...62,828,629
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Becn1
beclin 1
IMP
RGD
PMID:25561470
RGD:11561937
NCBI chr10:86,731,649...86,747,002
Ensembl chr10:86,731,650...86,747,002
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Chek2
checkpoint kinase 2
acts_upstream_of_or_within
ISO
(PMID:37943659)
RGD
PMID:37943659
NCBI chr12:51,448,838...51,481,159
Ensembl chr12:51,449,140...51,480,667
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Elapor1
endosome-lysosome associated apoptosis and autophagy regulator 1
involved_in
ISO IEA
(PMID:21072319) GO_REF:0000107
RGD Ensembl
PMID:21072319
GO_REF:0000107
NCBI chr 2:198,777,323...198,856,497
Ensembl chr 2:198,777,323...198,856,497
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Lrsam1
leucine rich repeat and sterile alpha motif containing 1
involved_in
ISO IEA
(PMID:25484098) GO_REF:0000107
RGD Ensembl
PMID:25484098
GO_REF:0000107
NCBI chr 3:36,621,042...36,661,932
Ensembl chr 3:36,621,042...36,661,825
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Moap1
modulator of apoptosis 1
involved_in
ISO
(PMID:33783314)
RGD
PMID:33783314
NCBI chr 6:127,647,389...127,649,324
Ensembl chr 6:127,613,488...127,669,324
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Pip4k2a
phosphatidylinositol-5-phosphate 4-kinase type 2 alpha
involved_in
ISO IEA
(PMID:25578879) GO_REF:0000107
RGD Ensembl
PMID:25578879
GO_REF:0000107
NCBI chr17:86,405,080...86,576,597
Ensembl chr17:86,405,081...86,576,430
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Pip4k2b
phosphatidylinositol-5-phosphate 4-kinase type 2 beta
involved_in
ISO IEA
(PMID:25578879) GO_REF:0000107
RGD Ensembl
PMID:25578879
GO_REF:0000107
NCBI chr10:82,706,016...82,734,938
Ensembl chr10:83,197,287...83,231,292
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Pip4k2c
phosphatidylinositol-5-phosphate 4-kinase type 2 gamma
involved_in
ISO IEA
(PMID:25578879) GO_REF:0000107
RGD Ensembl
PMID:25578879
GO_REF:0000107
NCBI chr 7:64,905,322...64,920,380
Ensembl chr 7:64,905,328...64,920,373
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Rab3gap1
RAB3 GTPase activating protein catalytic subunit 1
involved_in
ISO ISS IEA IBA
(PMID:25495476) GO_REF:0000024 GO_REF:0000107 GO_REF:0000033
RGD GO_Central Ensembl
PMID:25495476
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr13:39,355,698...39,429,154
Ensembl chr13:41,908,051...41,981,611
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Rab3gap2
RAB3 GTPase activating non-catalytic protein subunit 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:25495476) GO_REF:0000107
GO_Central RGD Ensembl
PMID:25495476
GO_REF:0000024 GO_REF:0000107
NCBI chr13:99,288,984...99,362,817
Ensembl chr13:99,288,647...99,361,053
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Ralb
RAS like proto-oncogene B
involved_in
ISO IEA
(PMID:24056301) GO_REF:0000107
RGD Ensembl
PMID:24056301
GO_REF:0000107
NCBI chr13:30,588,036...30,624,199
Ensembl chr13:33,140,835...33,176,998
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Sh3glb1
SH3 domain -containing GRB2-like endophilin B1
involved_in
ISO IEA
(PMID:21068542) GO_REF:0000107
RGD Ensembl
PMID:21068542
GO_REF:0000107
NCBI chr 2:236,411,194...236,445,225
Ensembl chr 2:236,410,436...236,445,140
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Snx18
sorting nexin 18
involved_in
ISO IEA
(PMID:29437695) GO_REF:0000107
RGD Ensembl
PMID:29437695
GO_REF:0000107
NCBI chr 2:45,232,325...45,258,345
Ensembl chr 2:46,965,498...46,991,516
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Snx30
sorting nexin family member 30
involved_in
ISO IEA
(PMID:32513819) GO_REF:0000107
RGD Ensembl
PMID:32513819
GO_REF:0000107
NCBI chr 5:74,683,902...74,813,013
Ensembl chr 5:79,478,912...79,607,052
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Snx4
sorting nexin 4
involved_in
ISO IBA IEA
(PMID:32513819), (PMID:33468622) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:32513819 PMID:33468622
GO_REF:0000033 GO_REF:0000107
NCBI chr11:80,965,965...81,023,234
Ensembl chr11:80,965,967...81,028,448
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Snx7
sorting nexin 7
involved_in
ISO IEA
(PMID:32513819) GO_REF:0000107
RGD Ensembl
PMID:32513819
GO_REF:0000107
NCBI chr 2:208,528,041...208,612,597
Ensembl chr 2:208,528,049...208,613,075
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Trim32
tripartite motif-containing 32
involved_in
ISO
(PMID:37943659)
RGD
PMID:37943659
NCBI chr 5:84,020,604...84,031,483
Ensembl chr 5:84,014,803...84,042,748
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Ulk1
unc-51 like autophagy activating kinase 1
IMP
RGD
PMID:23448468
RGD:13208863
NCBI chr12:51,511,492...51,537,746
Ensembl chr12:51,511,492...51,537,746
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Usp33
ubiquitin specific peptidase 33
involved_in
ISO
(PMID:24056301)
RGD
PMID:24056301
NCBI chr 2:241,283,209...241,328,479
Ensembl chr 2:243,943,175...243,988,424
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Wdr45
WD repeat domain 45
involved_in
ISO ISS IEA
(PMID:31271352) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:31271352
GO_REF:0000024 GO_REF:0000107
NCBI chr X:17,448,195...17,454,117
Ensembl chr X:17,448,207...17,454,117
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Wipi1
WD repeat domain, phosphoinositide interacting 1
involved_in
ISO IEA
(PMID:31271352) GO_REF:0000107
RGD Ensembl
PMID:31271352
GO_REF:0000107
NCBI chr10:95,042,451...95,079,679
Ensembl chr10:95,042,441...95,079,293
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Grn
granulin precursor
involved_in
ISS ISO
GO_REF:0000024 (PMID:28073925)
UniProt RGD
PMID:28073925
GO_REF:0000024
NCBI chr10:87,887,834...87,893,938
Ensembl chr10:87,886,122...87,893,936
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Irgm
immunity-related GTPase M
involved_in acts_upstream_of_or_within
ISO
(PMID:32753672) (PMID:25720963)
RGD
PMID:25720963 PMID:32753672
NCBI chr10:33,734,640...33,742,720
Ensembl chr10:33,732,961...33,743,228
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Mcoln1
mucolipin TRP cation channel 1
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:25720963) (PMID:32753672) GO_REF:0000107
RGD Ensembl
PMID:25720963 PMID:32753672
GO_REF:0000107
NCBI chr12:6,357,851...6,372,151
Ensembl chr12:6,357,807...6,372,151
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Ppp3cb
protein phosphatase 3 catalytic subunit beta
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:25720963), (PMID:32753672) GO_REF:0000107
RGD Ensembl
PMID:25720963 PMID:32753672
GO_REF:0000107
NCBI chr15:3,809,182...3,854,204
Ensembl chr15:3,809,262...3,854,203
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