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ONTOLOGY REPORT - ANNOTATIONS


Term:modulation by symbiont of host cellular process
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Accession:GO:0044068 term browser browse the term
Definition:Any process in which a symbiont organism modulates the frequency, rate or extent of a cellular process, any process that is carried out at the cellular level, but not necessarily restricted to a single cell, in its host organism.
Synonyms:exact_synonym: regulation by symbiont of host cellular process


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induction by virus of host autophagy term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO (MGI:MGI:5544501|PMID:24310610) RGD PMID:24310610 MGI:MGI:5544501 NCBI chr 3:110,159,624...110,245,382
Ensembl chr 3:110,159,708...110,249,217
JBrowse link
G Phb2 prohibitin 2 ISO (PMID:32276428) RGD PMID:32276428 NCBI chr 4:157,230,769...157,235,375
Ensembl chr 4:157,230,769...157,235,367
JBrowse link
induction by virus of host cell-cell fusion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd4 Cd4 molecule ISO (PMID:9166430) RGD PMID:9166430 NCBI chr 4:157,381,862...157,408,357
Ensembl chr 4:157,383,052...157,408,176
JBrowse link
modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnip1 TNFAIP3 interacting protein 1 ISO
IBA
(PMID:20010814)
PMID:21873635
RGD PMID:20010814, PMID:21873635 RGD:13792537 NCBI chr10:40,255,776...40,303,092
Ensembl chr10:40,255,776...40,296,470
JBrowse link
modulation by virus of host transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntrk3 neurotrophic receptor tyrosine kinase 3 IEP RGD PMID:11175319 RGD:2325644 NCBI chr 1:139,890,537...140,262,503
Ensembl chr 1:139,890,560...140,262,503
JBrowse link
negative regulation by symbiont of host apoptotic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpinb9 serpin family B member 9 ISO (PMID:22090449) RGD PMID:22090449 NCBI chr17:32,648,846...32,673,047
Ensembl chr17:32,650,441...32,661,865
JBrowse link
positive regulation by organism of apoptotic process in other organism involved in symbiotic interaction term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gapdh glyceraldehyde-3-phosphate dehydrogenase ISO (PMID:22832495) RGD PMID:22832495 NCBI chr 4:157,676,336...157,680,322
Ensembl chr 4:157,676,595...157,679,962
JBrowse link
positive regulation by symbiont of host autophagy term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 ISO
IEA
UniProtKB:O95352 (PMID:28389568)
GO_REF:0000107
RGD
Ensembl
PMID:28389568 GO_REF:0000107 NCBI chr20:49,301,783...49,393,147
Ensembl chr20:49,318,308...49,393,140
JBrowse link
G Atg7 autophagy related 7 ISO UniProtKB:Q9H1Y0 (PMID:28389568) RGD PMID:28389568 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
G Irgm immunity-related GTPase M ISO (MGI:MGI:3656111|PMID:16888103)
(PMID:16888103), (PMID:28389568)
RGD PMID:16888103, PMID:28389568 MGI:MGI:3656111 NCBI chr10:34,213,885...34,221,968
Ensembl chr10:34,213,936...34,221,928
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 ISO UniProtKB:Q8IYT8 (PMID:28389568) RGD PMID:28389568 NCBI chr12:51,908,105...51,934,704
Ensembl chr12:51,908,448...51,934,702
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 ISO UniProtKB:O75385 (PMID:28389568) RGD PMID:28389568 NCBI chr10:48,050,079...48,129,377
Ensembl chr10:48,050,803...48,129,377
JBrowse link
positive regulation of apoptotic process by virus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bad BCL2-associated agonist of cell death ISO (MGI:MGI:3057092|PMID:15231831) RGD PMID:15231831 MGI:MGI:3057092 NCBI chr 1:222,198,516...222,207,459
Ensembl chr 1:222,198,534...222,207,453
JBrowse link
G Bcl2l11 BCL2 like 11 ISO (MGI:MGI:3057092|PMID:15231831) RGD PMID:15231831 MGI:MGI:3057092 NCBI chr 3:120,726,906...120,764,192
Ensembl chr 3:120,726,906...120,764,192
JBrowse link
G Ccr5 C-C motif chemokine receptor 5 IMP HIV-1 RGD PMID:19034668 RGD:4890424 NCBI chr 8:133,192,398...133,215,599
Ensembl chr 8:133,197,032...133,215,614
JBrowse link
suppression by virus of host apoptotic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bad BCL2-associated agonist of cell death ISO MGI:MGI:2675966 (MGI:MGI:3057092|PMID:15231831) RGD PMID:15231831 MGI:MGI:3057092 NCBI chr 1:222,198,516...222,207,459
Ensembl chr 1:222,198,534...222,207,453
JBrowse link
G Bcl2l1 Bcl2-like 1 ISO (PMID:15231831) RGD PMID:15231831 NCBI chr 3:148,259,594...148,314,191
Ensembl chr 3:148,259,596...148,313,810
JBrowse link
suppression by virus of host autophagy term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 ISO (PMID:23290079) RGD PMID:23290079 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    cellular process 18800
      regulation of cellular process 12561
        modulation by symbiont of host cellular process 16
          modulation by symbiont of defense-related host calcium ion flux + 0
          modulation by symbiont of host anion transport 0
          modulation by symbiont of host autophagy + 7
          modulation by symbiont of host cell cycle + 0
          modulation by symbiont of host cell motility 0
          modulation by symbiont of host erythrocyte aggregation 0
          modulation by symbiont of host intracellular transport + 0
          modulation by symbiont of host programmed cell death + 9
          modulation by symbiont of host protein localization to phagocytic vesicle + 0
          modulation by symbiont of host receptor-mediated endocytosis + 0
          modulation by symbiont of host salicylic acid-mediated defense response + 0
          modulation by symbiont of host signal transduction pathway + 1
          modulation by symbiont of host synaptic transmission + 0
          modulation by symbiont of host transcription + 1
          modulation by symbiont of host translation + 0
          modulation by symbiont of host vacuole organization + 0
          modulation by virus of host cellular process + 9
          negative regulation by symbiont of host peptidase activity 0
Path 2
Term Annotations click to browse term
  biological_process 20028
    interspecies interaction between organisms 1919
      symbiotic process 400
        interaction with host 157
          modulation by symbiont of host process 27
            modulation by symbiont of host cellular process 16
              modulation by symbiont of defense-related host calcium ion flux + 0
              modulation by symbiont of host anion transport 0
              modulation by symbiont of host autophagy + 7
              modulation by symbiont of host cell cycle + 0
              modulation by symbiont of host cell motility 0
              modulation by symbiont of host erythrocyte aggregation 0
              modulation by symbiont of host intracellular transport + 0
              modulation by symbiont of host programmed cell death + 9
              modulation by symbiont of host protein localization to phagocytic vesicle + 0
              modulation by symbiont of host receptor-mediated endocytosis + 0
              modulation by symbiont of host salicylic acid-mediated defense response + 0
              modulation by symbiont of host signal transduction pathway + 1
              modulation by symbiont of host synaptic transmission + 0
              modulation by symbiont of host transcription + 1
              modulation by symbiont of host translation + 0
              modulation by symbiont of host vacuole organization + 0
              modulation by virus of host cellular process + 9
              negative regulation by symbiont of host peptidase activity 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.