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ONTOLOGY REPORT - ANNOTATIONS


Term:dicarboxylic acid catabolic process
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Accession:GO:0043649 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of dicarboxylic acids, any organic acid containing two carboxyl (-COOH) groups.
Synonyms:exact_synonym: dicarboxylate catabolic process;   dicarboxylate catabolism;   dicarboxylic acid breakdown;   dicarboxylic acid catabolism;   dicarboxylic acid degradation



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dicarboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot4 acyl-CoA thioesterase 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:84,037,254...84,044,723
Ensembl chr12:84,038,379...84,048,601
JBrowse link
G Acot8 acyl-CoA thioesterase 8 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:164,792,768...164,820,219
Ensembl chr 2:164,792,765...164,804,882
JBrowse link
10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 6:90,550,768...90,599,171
Ensembl chr 6:90,486,427...90,600,203
JBrowse link
G Aldh1l2 aldehyde dehydrogenase 1 family, member L2 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr10:83,487,447...83,534,146
Ensembl chr10:83,487,450...83,534,140
JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddo D-aspartate oxidase involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr10:40,630,011...40,681,847
Ensembl chr10:40,630,011...40,681,847
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1, soluble involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:43,499,752...43,524,605
Ensembl chr19:43,499,752...43,524,605
JBrowse link
G Got2 glutamatic-oxaloacetic transaminase 2, mitochondrial involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 8:95,864,133...95,888,401
Ensembl chr 8:95,864,134...95,888,547
JBrowse link
folic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfs 5, 10-methenyltetrahydrofolate synthetase involved_in ISO (PMID:12764149) BHF-UCL PMID:12764149 NCBI chr 9:89,211,190...89,240,225
Ensembl chr 9:89,210,676...89,377,713
JBrowse link
G Pm20d2 peptidase M20 domain containing 2 NOT|involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:33,170,401...33,189,737
Ensembl chr 4:33,174,230...33,189,737
JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glud1 glutamate dehydrogenase 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr14:34,310,727...34,345,033
Ensembl chr14:34,310,727...34,345,265
JBrowse link
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1, soluble acts_upstream_of_or_within
involved_in
IDA
ISO
(MGI:53641|PMID:4193185) MGI
RGD
PMID:4193185 PMID:16489927 GO_REF:0000096 MGI:4417868 MGI:53641 RGD:13504861 NCBI chr19:43,499,752...43,524,605
Ensembl chr19:43,499,752...43,524,605
JBrowse link
G Got2 glutamatic-oxaloacetic transaminase 2, mitochondrial acts_upstream_of_or_within
involved_in
IDA
ISO
(MGI:53641|PMID:4193185) MGI
RGD
PMID:4193185 PMID:16489927 GO_REF:0000096 MGI:4417868 MGI:53641 RGD:13504861 NCBI chr 8:95,864,133...95,888,401
Ensembl chr 8:95,864,134...95,888,547
JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1, soluble acts_upstream_of_or_within IDA (MGI:53641|PMID:4193185) MGI PMID:4193185 MGI:53641 NCBI chr19:43,499,752...43,524,605
Ensembl chr19:43,499,752...43,524,605
JBrowse link
G Got2 glutamatic-oxaloacetic transaminase 2, mitochondrial acts_upstream_of_or_within IDA (MGI:53641|PMID:4193185) MGI PMID:4193185 MGI:53641 NCBI chr 8:95,864,133...95,888,401
Ensembl chr 8:95,864,134...95,888,547
JBrowse link
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adhfe1 alcohol dehydrogenase, iron containing, 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:9,547,948...9,577,970
Ensembl chr 1:9,547,948...9,580,673
JBrowse link
glutamate decarboxylation to succinate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad2 glutamic acid decarboxylase 2 involved_in ISO RGD
MGI
PMID:8999827 GO_REF:0000096 MGI:4417868 RGD:1625237 NCBI chr 2:22,621,015...22,693,877
Ensembl chr 2:22,622,205...22,693,874
JBrowse link
malonate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsf3 acyl-CoA synthetase family member 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:122,775,470...122,817,887
Ensembl chr 8:122,775,486...122,817,880
JBrowse link
quinolinate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Qprt quinolinate phosphoribosyltransferase involved_in
acts_upstream_of_or_within
IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000008 MGI:2154458 MGI:6201960 NCBI chr 7:127,107,770...127,122,029
Ensembl chr 7:127,107,114...127,122,226
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 29900
    metabolic process 11255
      small molecule metabolic process 1750
        organic acid metabolic process 998
          organic acid catabolic process 220
            carboxylic acid catabolic process 218
              dicarboxylic acid catabolic process 14
                10-formyltetrahydrofolate catabolic process 2
                5,6,7,8-tetrahydromethanopterin catabolic process 0
                actinorhodin catabolic process 0
                aldaric acid catabolic process + 0
                asparagine biosynthetic process from oxaloacetate 0
                aspartate catabolic process + 3
                folic acid catabolic process 2
                glutamate catabolic process + 5
                malonate catabolic process 1
                oxalate catabolic process 0
                prephenate(2-) catabolic process 0
                quinolinate catabolic process 1
Path 2
Term Annotations click to browse term
  biological_process 29900
    metabolic process 11255
      cellular metabolic process 10089
        organic acid metabolic process 998
          oxoacid metabolic process 966
            carboxylic acid metabolic process 948
              dicarboxylic acid metabolic process 93
                dicarboxylic acid catabolic process 14
                  10-formyltetrahydrofolate catabolic process 2
                  5,6,7,8-tetrahydromethanopterin catabolic process 0
                  actinorhodin catabolic process 0
                  aldaric acid catabolic process + 0
                  asparagine biosynthetic process from oxaloacetate 0
                  aspartate catabolic process + 3
                  folic acid catabolic process 2
                  glutamate catabolic process + 5
                  malonate catabolic process 1
                  oxalate catabolic process 0
                  prephenate(2-) catabolic process 0
                  quinolinate catabolic process 1
paths to the root