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ONTOLOGY REPORT - ANNOTATIONS


Term:dicarboxylic acid catabolic process
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Accession:GO:0043649 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of dicarboxylic acids, any organic acid containing two carboxyl (-COOH) groups.
Synonyms:exact_synonym: dicarboxylate catabolic process;   dicarboxylate catabolism;   dicarboxylic acid breakdown;   dicarboxylic acid catabolism;   dicarboxylic acid degradation



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dicarboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT4 acyl-CoA thioesterase 4 involved_in IDA (PMID:16141203) UniProt PMID:16141203 NCBI chr14:73,591,873...73,595,766
Ensembl chr14:73,591,873...73,595,766
JBrowse link
G ACOT8 acyl-CoA thioesterase 8 involved_in IDA (PMID:16141203) UniProt PMID:16141203 NCBI chr20:45,841,721...45,857,405
Ensembl chr20:45,841,721...45,857,405
JBrowse link
10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:126,103,565...126,197,758
Ensembl chr 3:126,103,562...126,197,994
JBrowse link
G ALDH1L2 aldehyde dehydrogenase 1 family member L2 involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr12:105,019,784...105,084,609
Ensembl chr12:105,019,784...105,107,643
JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPA aspartoacylase involved_in TAS (PMID:8252036) PINC PMID:8252036 NCBI chr17:3,473,646...3,503,405
Ensembl chr17:3,472,374...3,503,405
JBrowse link
G DDO D-aspartate oxidase involved_in IBA
IDA
(PMID:21873635)
(PMID:9163533)
GO_Central
UniProt
PMID:9163533 PMID:21873635 NCBI chr 6:110,388,321...110,415,575
Ensembl chr 6:110,391,771...110,415,575
JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in IDA (PMID:2241899) UniProt PMID:2241899 NCBI chr10:99,396,870...99,430,624
Ensembl chr10:99,396,870...99,430,624
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in IBA
IDA
(PMID:21873635)
(PMID:2567216)
GO_Central
UniProt
PMID:2567216 PMID:21873635 NCBI chr16:58,707,131...58,734,316
Ensembl chr16:58,707,131...58,734,342
JBrowse link
folic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTHFS methenyltetrahydrofolate synthetase involved_in IMP (PMID:12764149) BHF-UCL PMID:12764149 NCBI chr15:79,843,547...79,897,285
Ensembl chr15:79,833,585...79,897,379
JBrowse link
G PM20D2 peptidase M20 domain containing 2 NOT|involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:89,094,818...89,165,565
Ensembl chr 6:89,146,055...89,165,565
JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAD1 glutamate decarboxylase 1 involved_in TAS (PMID:10671565) UniProt PMID:10671565 NCBI chr 2:170,813,210...170,861,151
Ensembl chr 2:170,813,213...170,861,151
JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in IDA
IBA
(PMID:11032875), (PMID:6121377)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:6121377 PMID:11032875 PMID:21873635 NCBI chr10:87,050,202...87,094,843
Ensembl chr10:87,050,202...87,094,843
JBrowse link
G GLUD2 glutamate dehydrogenase 2 involved_in IBA
IDA
(PMID:21873635)
(PMID:11032875)
GO_Central
BHF-UCL
PMID:11032875 PMID:21873635 NCBI chr  X:121,047,610...121,050,094
Ensembl chr  X:121,047,610...121,050,094
JBrowse link
G GLUL glutamate-ammonia ligase involved_in TAS (PMID:21757002) BHF-UCL PMID:21757002 NCBI chr 1:182,378,098...182,391,790
Ensembl chr 1:182,378,098...182,392,206
JBrowse link
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:53641|PMID:4193185) Ensembl
MGI
RGD
PMID:4193185 PMID:16489927 GO_REF:0000107 MGI:53641 RGD:13504861 NCBI chr10:99,396,870...99,430,624
Ensembl chr10:99,396,870...99,430,624
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:53641|PMID:4193185) Ensembl
MGI
RGD
PMID:4193185 PMID:16489927 GO_REF:0000107 MGI:53641 RGD:13504861 NCBI chr16:58,707,131...58,734,316
Ensembl chr16:58,707,131...58,734,342
JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:53641|PMID:4193185) Ensembl
MGI
PMID:4193185 GO_REF:0000107 MGI:53641 NCBI chr10:99,396,870...99,430,624
Ensembl chr10:99,396,870...99,430,624
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:53641|PMID:4193185) Ensembl
MGI
PMID:4193185 GO_REF:0000107 MGI:53641 NCBI chr16:58,707,131...58,734,316
Ensembl chr16:58,707,131...58,734,342
JBrowse link
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADHFE1 alcohol dehydrogenase iron containing 1 involved_in IDA (PMID:16435184) UniProt PMID:16435184 NCBI chr 8:66,432,504...66,468,907
Ensembl chr 8:66,432,492...66,468,907
JBrowse link
glutamate decarboxylation to succinate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAD1 glutamate decarboxylase 1 involved_in TAS (PMID:1549570) PINC PMID:1549570 NCBI chr 2:170,813,210...170,861,151
Ensembl chr 2:170,813,213...170,861,151
JBrowse link
G GAD2 glutamate decarboxylase 2 involved_in IEA
ISO
Ensembl
RGD
PMID:8999827 GO_REF:0000107 RGD:1625237 NCBI chr10:26,216,372...26,304,558
Ensembl chr10:26,216,665...26,304,558
JBrowse link
malonate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSF3 acyl-CoA synthetase family member 3 involved_in IDA (PMID:21642549), (PMID:21846720) UniProt PMID:21642549 PMID:21846720 NCBI chr16:89,093,847...89,160,556
Ensembl chr16:89,088,375...89,164,121
JBrowse link
quinolinate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G QPRT quinolinate phosphoribosyltransferase involved_in
acts_upstream_of_or_within
IDA
IBA
(PMID:24038671), (PMID:3409840), (PMID:9473669)
(PMID:9473669)
(PMID:21873635)
UniProt
MGI
GO_Central
PMID:3409840 PMID:9473669 PMID:21873635 PMID:24038671 NCBI chr16:29,670,588...29,698,699
Ensembl chr16:29,663,279...29,698,699
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18539
    metabolic process 11872
      small molecule metabolic process 1891
        organic acid metabolic process 1039
          organic acid catabolic process 255
            carboxylic acid catabolic process 251
              dicarboxylic acid catabolic process 18
                10-formyltetrahydrofolate catabolic process 2
                5,6,7,8-tetrahydromethanopterin catabolic process 0
                actinorhodin catabolic process 0
                aldaric acid catabolic process + 0
                asparagine biosynthetic process from oxaloacetate 0
                aspartate catabolic process + 4
                folic acid catabolic process 2
                glutamate catabolic process + 8
                malonate catabolic process 1
                oxalate catabolic process 0
                prephenate(2-) catabolic process 0
                quinolinate catabolic process 1
Path 2
Term Annotations click to browse term
  biological_process 18539
    metabolic process 11872
      cellular metabolic process 10812
        organic acid metabolic process 1039
          oxoacid metabolic process 1011
            carboxylic acid metabolic process 982
              dicarboxylic acid metabolic process 106
                dicarboxylic acid catabolic process 18
                  10-formyltetrahydrofolate catabolic process 2
                  5,6,7,8-tetrahydromethanopterin catabolic process 0
                  actinorhodin catabolic process 0
                  aldaric acid catabolic process + 0
                  asparagine biosynthetic process from oxaloacetate 0
                  aspartate catabolic process + 4
                  folic acid catabolic process 2
                  glutamate catabolic process + 8
                  malonate catabolic process 1
                  oxalate catabolic process 0
                  prephenate(2-) catabolic process 0
                  quinolinate catabolic process 1
paths to the root