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ONTOLOGY REPORT - ANNOTATIONS

Term:dicarboxylic acid catabolic process
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Accession:GO:0043649 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of dicarboxylic acids, any organic acid containing two carboxyl (-COOH) groups.
Synonyms:exact_synonym: dicarboxylate catabolic process;   dicarboxylate catabolism;   dicarboxylic acid breakdown;   dicarboxylic acid catabolism;   dicarboxylic acid degradation

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dicarboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot8 acyl-CoA thioesterase 8 involved_in ISO (PMID:16141203) UniProt PMID:16141203 NCBI chrNW_004955445:11,434,649...11,454,806
Ensembl chrNW_004955445:11,434,082...11,454,806 		JBrowse link
10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aasdhppt aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase acts_upstream_of_positive_effect ISO (PMID:19933275), (PMID:21238436) UniProt PMID:19933275 PMID:21238436 NCBI chrNW_004955412:8,723,828...8,747,684
Ensembl chrNW_004955412:8,723,828...8,748,701 		JBrowse link
G Aldh1l1 aldehyde dehydrogenase 1 family member L1 involved_in ISO (PMID:19933275)
PMID:10585460
(MGI:6369507|PMID:31624291)
PMID:1848231		 UniProt PMID:1848231 PMID:10585460 PMID:19933275 PMID:31624291 MGI:6369507 RGD:150521656 RGD:632027 NCBI chrNW_004955421:21,420,264...21,506,004
Ensembl chrNW_004955421:21,420,147...21,527,037 		JBrowse link
G Aldh1l2 aldehyde dehydrogenase 1 family member L2 involved_in ISO (PMID:21238436)
(MGI:6489626|PMID:33168096)		 UniProt PMID:21238436 PMID:33168096 MGI:6489626 NCBI chrNW_004955405:39,387,949...39,437,282
Ensembl chrNW_004955405:39,387,527...39,437,322 		JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddo D-aspartate oxidase involved_in ISO (PMID:9163533) UniProt PMID:9163533 NCBI chrNW_004955411:35,142,415...35,163,234
Ensembl chrNW_004955411:35,143,735...35,163,276 		JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 involved_in ISO (PMID:2241899) UniProt PMID:2241899 NCBI chrNW_004955507:5,346,937...5,370,072
Ensembl chrNW_004955507:5,346,838...5,370,072 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 involved_in ISO (PMID:2567216) UniProt PMID:2567216 NCBI chrNW_004955433:16,121,795...16,145,129
Ensembl chrNW_004955433:16,122,824...16,145,113 		JBrowse link
folic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfs methenyltetrahydrofolate synthetase involved_in ISO (PMID:12764149) BHF-UCL PMID:12764149 NCBI chrNW_004955533:720,255...756,893
Ensembl chrNW_004955533:720,353...756,893 		JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad1 glutamate decarboxylase 1 involved_in ISO (PMID:17384644) UniProt PMID:17384644 NCBI chrNW_004955449:3,964,006...4,001,850
Ensembl chrNW_004955449:3,963,705...4,001,850 		JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in ISO (PMID:11032875), (PMID:6121377) BHF-UCL PMID:6121377 PMID:11032875 NCBI chrNW_004955510:5,987,811...6,021,001 JBrowse link
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within ISO (PMID:4193185) RGD
MGI		 PMID:4193185 PMID:16489927 RGD:13504861 NCBI chrNW_004955507:5,346,937...5,370,072
Ensembl chrNW_004955507:5,346,838...5,370,072 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) RGD
MGI		 PMID:4193185 PMID:16489927 RGD:13504861 NCBI chrNW_004955433:16,121,795...16,145,129
Ensembl chrNW_004955433:16,122,824...16,145,113 		JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within ISO (PMID:4193185) MGI PMID:4193185 NCBI chrNW_004955507:5,346,937...5,370,072
Ensembl chrNW_004955507:5,346,838...5,370,072 		JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) MGI PMID:4193185 NCBI chrNW_004955433:16,121,795...16,145,129
Ensembl chrNW_004955433:16,122,824...16,145,113 		JBrowse link
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adhfe1 alcohol dehydrogenase iron containing 1 involved_in ISO (PMID:16435184) UniProt PMID:16435184 NCBI chrNW_004955444:12,706,404...12,745,106
Ensembl chrNW_004955444:12,706,912...12,745,056 		JBrowse link
glutamate decarboxylation to succinate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad2 glutamate decarboxylase 2 ISO RGD PMID:8999827 RGD:1625237 NCBI chrNW_004955429:3,092,977...3,170,128
Ensembl chrNW_004955429:3,096,453...3,169,259 		JBrowse link
malonate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsf3 acyl-CoA synthetase family member 3 involved_in ISO (PMID:21642549), (PMID:21846720) UniProt PMID:21642549 PMID:21846720 NCBI chrNW_004955541:2,837,487...2,876,220
Ensembl chrNW_004955541:2,837,448...2,876,316 		JBrowse link
quinolinate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Qprt quinolinate phosphoribosyltransferase involved_in
acts_upstream_of_or_within		 ISO (PMID:24038671), (PMID:3409840), (PMID:9473669)
(PMID:9473669)		 UniProt
MGI		 PMID:3409840 PMID:9473669 PMID:24038671 NCBI chrNW_004955493:7,225,472...7,243,078
Ensembl chrNW_004955493:7,224,983...7,242,852 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12346
    metabolic process 7467
      small molecule metabolic process 1297
        organic acid metabolic process 663
          organic acid catabolic process 164
            carboxylic acid catabolic process 164
              dicarboxylic acid catabolic process 14
                10-formyltetrahydrofolate catabolic process 3
                5,6,7,8-tetrahydromethanopterin catabolic process 0
                actinorhodin catabolic process 0
                aldaric acid catabolic process + 0
                asparagine biosynthetic process from oxaloacetate 0
                aspartate catabolic process + 3
                folic acid catabolic process 1
                glutamate catabolic process + 6
                malonate catabolic process 1
                oxalate catabolic process 0
                prephenate(2-) catabolic process 0
                quinolinate catabolic process 1
Path 2
Term Annotations click to browse term
  biological_process 12346
    metabolic process 7467
      cellular metabolic process 6295
        organic acid metabolic process 663
          oxoacid metabolic process 659
            carboxylic acid metabolic process 651
              dicarboxylic acid metabolic process 80
                dicarboxylic acid catabolic process 14
                  10-formyltetrahydrofolate catabolic process 3
                  5,6,7,8-tetrahydromethanopterin catabolic process 0
                  actinorhodin catabolic process 0
                  aldaric acid catabolic process + 0
                  asparagine biosynthetic process from oxaloacetate 0
                  aspartate catabolic process + 3
                  folic acid catabolic process 1
                  glutamate catabolic process + 6
                  malonate catabolic process 1
                  oxalate catabolic process 0
                  prephenate(2-) catabolic process 0
                  quinolinate catabolic process 1
paths to the root