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ONTOLOGY REPORT - ANNOTATIONS


Term:dicarboxylic acid catabolic process
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Accession:GO:0043649 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of dicarboxylic acids, any organic acid containing two carboxyl (-COOH) groups.
Synonyms:exact_synonym: dicarboxylate catabolic process;   dicarboxylate catabolism;   dicarboxylic acid breakdown;   dicarboxylic acid catabolism;   dicarboxylic acid degradation



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dicarboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot4 acyl-CoA thioesterase 4 involved_in ISO (PMID:16141203) RGD PMID:16141203 NCBI chr 6:103,668,699...103,674,037
Ensembl chr 6:103,668,753...103,673,917
JBrowse link
G Acot8 acyl-CoA thioesterase 8 involved_in IEA
ISO
GO_REF:0000107
(PMID:16141203)
Ensembl
RGD
PMID:16141203 GO_REF:0000107 NCBI chr 3:153,531,192...153,542,851
Ensembl chr 3:153,531,193...153,542,851
JBrowse link
10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aasdhppt aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase acts_upstream_of_positive_effect
involved_in
ISO
IEA
(PMID:19933275), (PMID:21238436)
GO_REF:0000107
RGD
Ensembl
PMID:19933275 PMID:21238436 GO_REF:0000107 NCBI chr 8:1,453,226...1,463,990
Ensembl chr 8:1,452,282...1,463,966
JBrowse link
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 involved_in ISO
IEA
IMP
IDA
(PMID:19933275)
GO_REF:0000117
PMID:10585460
(MGI:6369507|PMID:31624291)
PMID:1848231
RGD
UniProt
PMID:19933275 PMID:31624291 PMID:10585460 PMID:1848231 GO_REF:0000117 MGI:6369507, RGD:150521656, RGD:632027 NCBI chr 4:123,059,989...123,106,471
Ensembl chr 4:123,060,008...123,106,465
JBrowse link
G Aldh1l2 aldehyde dehydrogenase 1 family, member L2 involved_in ISO (PMID:21238436)
(MGI:6489626|PMID:33168096)
RGD PMID:21238436 PMID:33168096 MGI:6489626 NCBI chr 7:20,254,246...20,305,793
Ensembl chr 7:20,254,233...20,305,776
JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddo D-aspartate oxidase involved_in ISO
IBA
(PMID:9163533)
GO_REF:0000033
RGD
GO_Central
PMID:9163533 GO_REF:0000033 NCBI chr20:44,090,823...44,109,962
Ensembl chr20:44,090,914...44,133,095
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 involved_in ISO
IEA
(PMID:2241899)
GO_REF:0000107
RGD
Ensembl
PMID:2241899 GO_REF:0000107 NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 involved_in ISO
IBA
(PMID:2567216)
GO_REF:0000033
RGD
GO_Central
PMID:2567216 GO_REF:0000033 NCBI chr19:9,174,304...9,199,995
Ensembl chr19:9,174,311...9,199,994
JBrowse link
folic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfs methenyltetrahydrofolate synthetase involved_in ISO (PMID:12764149) RGD PMID:12764149 NCBI chr 8:89,729,498...89,801,998
Ensembl chr 8:89,729,508...89,799,089
JBrowse link
G Pm20d2 peptidase M20 domain containing 2 NOT|involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:47,566,059...47,586,334
Ensembl chr 5:47,566,072...47,586,212
JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad1 glutamate decarboxylase 1 involved_in ISO
IEA
(PMID:17384644)
GO_REF:0000107
RGD
Ensembl
PMID:17384644 GO_REF:0000107 NCBI chr 3:55,369,704...55,410,335
Ensembl chr 3:55,369,704...55,410,333
JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in ISO
IBA
(PMID:11032875), (PMID:6121377)
GO_REF:0000033
RGD
GO_Central
PMID:6121377 PMID:11032875 GO_REF:0000033 NCBI chr16:9,640,312...9,673,961
Ensembl chr16:9,640,312...9,673,957
JBrowse link
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:4193185)
Ensembl
RGD
PMID:4193185 GO_REF:0000107 NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) RGD PMID:4193185 NCBI chr19:9,174,304...9,199,995
Ensembl chr19:9,174,311...9,199,994
JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:4193185)
Ensembl
RGD
PMID:4193185 GO_REF:0000107 NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (PMID:4193185) RGD PMID:4193185 NCBI chr19:9,174,304...9,199,995
Ensembl chr19:9,174,311...9,199,994
JBrowse link
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adhfe1 alcohol dehydrogenase, iron containing, 1 involved_in ISO
IEA
ISS
(PMID:16435184)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16435184 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:9,705,966...9,732,580
Ensembl chr 5:9,705,970...9,732,517
JBrowse link
glutamate decarboxylation to succinate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad2 glutamate decarboxylase 2 involved_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:8999827 GO_REF:0000033, RGD:1625237 NCBI chr17:84,763,630...84,826,155
Ensembl chr17:84,763,628...84,826,155
JBrowse link
malonate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsf3 acyl-CoA synthetase family member 3 involved_in ISO (PMID:21642549), (PMID:21846720) RGD PMID:21642549 PMID:21846720 NCBI chr19:50,835,116...50,875,557
Ensembl chr19:50,835,221...50,875,553
JBrowse link
quinolinate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Qprt quinolinate phosphoribosyltransferase involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
(PMID:24038671), (PMID:3409840), (PMID:9473669)
GO_REF:0000033
GO_REF:0000107
(PMID:9473669)
RGD
GO_Central
Ensembl
PMID:3409840 PMID:9473669 PMID:24038671 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:181,718,189...181,733,486
Ensembl chr 1:181,718,190...181,733,486
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19872
    metabolic process 11602
      catabolic process 2797
        cellular catabolic process 1108
          organic acid catabolic process 255
            carboxylic acid catabolic process 255
              dicarboxylic acid catabolic process 16
                10-formyltetrahydrofolate catabolic process 3
                5,6,7,8-tetrahydromethanopterin catabolic process 0
                actinorhodin catabolic process 0
                aldaric acid catabolic process + 0
                asparagine biosynthetic process from oxaloacetate 0
                aspartate catabolic process + 3
                folic acid catabolic process 2
                glutamate catabolic process + 6
                malonate catabolic process 1
                oxalate catabolic process 0
                prephenate(2-) catabolic process 0
                quinolinate catabolic process 1
Path 2
Term Annotations click to browse term
  biological_process 19872
    cellular process 18312
      cellular metabolic process 9669
        organic acid metabolic process 1025
          oxoacid metabolic process 1014
            carboxylic acid metabolic process 999
              carboxylic acid catabolic process 255
                dicarboxylic acid catabolic process 16
                  10-formyltetrahydrofolate catabolic process 3
                  5,6,7,8-tetrahydromethanopterin catabolic process 0
                  actinorhodin catabolic process 0
                  aldaric acid catabolic process + 0
                  asparagine biosynthetic process from oxaloacetate 0
                  aspartate catabolic process + 3
                  folic acid catabolic process 2
                  glutamate catabolic process + 6
                  malonate catabolic process 1
                  oxalate catabolic process 0
                  prephenate(2-) catabolic process 0
                  quinolinate catabolic process 1
paths to the root