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ONTOLOGY REPORT - ANNOTATIONS


Term:peroxisomal transport
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Accession:GO:0043574 term browser browse the term
Definition:Transport of substances into, out of or within a peroxisome, a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules.



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long-chain fatty acid import into peroxisome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO
IBA
ISS
UniProtKB:P34230 (PMID:18757502)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:18757502 PMID:21873635 PMID:21873635 GO_REF:0000024, RGD:13792537, RGD:13792537 NCBI chr  X:151,428,334...151,450,115
Ensembl chr  X:151,428,578...151,450,115
JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:122,263,034...122,311,642
Ensembl chr 7:122,263,032...122,311,642
JBrowse link
G Abcd3 ATP binding cassette subfamily D member 3 involved_in TAS
ISS
ISO
IBA
GO_REF:0000024
(PMID:24333844)
PMID:21873635
UniProt
RGD
PMID:24333844 PMID:11883951 PMID:21873635 GO_REF:0000024, RGD:1358265, RGD:13792537 NCBI chr 2:209,852,087...209,905,763
Ensembl chr 2:209,852,087...209,906,020
JBrowse link
G Abcd4 ATP binding cassette subfamily D member 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 6:104,246,459...104,260,965
Ensembl chr 6:104,246,468...104,280,276
JBrowse link
protein import into peroxisome matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lonp2 lon peptidase 2, peroxisomal involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr19:20,407,475...20,499,030
Ensembl chr19:20,407,477...20,499,014
JBrowse link
G Pex1 peroxisomal biogenesis factor 1 involved_in IBA
ISO
PMID:21873635
(PMID:9398847)
RGD PMID:9398847 PMID:21873635 RGD:13792537 NCBI chr 4:30,519,950...30,558,953
Ensembl chr 4:30,519,955...30,558,921
JBrowse link
G Pex10 peroxisomal biogenesis factor 10 involved_in IBA
ISO
PMID:21873635
(PMID:9683594)
(PMID:10862081)
RGD PMID:9683594 PMID:10862081 PMID:21873635 RGD:13792537 NCBI chr 5:165,627,799...165,632,965
Ensembl chr 5:165,627,799...165,632,965
JBrowse link
G Pex12 peroxisomal biogenesis factor 12 involved_in IBA
ISO
PMID:21873635
(PMID:10562279), (PMID:9090384)
RGD PMID:9090384 PMID:10562279 PMID:21873635 RGD:13792537 NCBI chr10:68,095,776...68,103,812
Ensembl chr10:68,095,776...68,099,428
JBrowse link
G Pex14 peroxisomal biogenesis factor 14 involved_in ISO (PMID:15146459) RGD PMID:15146459 NCBI chr 5:159,399,776...159,536,260
Ensembl chr 5:159,399,776...159,536,272
JBrowse link
G Pex16 peroxisomal biogenesis factor 16 acts_upstream_of_or_within ISO (PMID:9922452) RGD PMID:9922452 NCBI chr 3:78,347,212...78,352,603
Ensembl chr 3:78,343,164...78,353,207
JBrowse link
G Pex2 peroxisomal biogenesis factor 2 involved_in ISO (PMID:10528859) RGD PMID:10528859 NCBI chr 2:96,050,380...96,072,928
Ensembl chr 2:96,045,958...96,073,404
JBrowse link
G Pex26 peroxisomal biogenesis factor 26 involved_in IBA
ISO
PMID:21873635
(PMID:15858711), (PMID:16257970)
RGD PMID:15858711 PMID:16257970 PMID:21873635 RGD:13792537 NCBI chr 4:154,414,332...154,426,954
Ensembl chr 4:154,414,849...154,426,952
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in ISO UniProtKB:O09012 (PMID:11463335), (PMID:18346465)
(MGI:5442515|PMID:11463335)
UniProtKB:O09012 (PMID:11931631)
RGD PMID:11463335 PMID:11931631 PMID:18346465 MGI:5442515 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431
JBrowse link
G Pex6 peroxisomal biogenesis factor 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:14,258,145...14,270,335
Ensembl chr 9:14,258,145...14,270,303
JBrowse link
G Pex7 peroxisomal biogenesis factor 7 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:9090381)
(PMID:12522768)
(MGI:1289107|PMID:9090381)
RGD PMID:9090381 PMID:12522768 PMID:21873635 MGI:1289107, RGD:13792537 NCBI chr 1:14,582,698...14,646,686
Ensembl chr 1:14,582,699...14,646,748
JBrowse link
protein import into peroxisome matrix, docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pex13 peroxisomal biogenesis factor 13 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2384515 (MGI:2670243|PMID:12897163)
(PMID:8858165)
RGD PMID:8858165 PMID:12897163 PMID:21873635 MGI:2670243, RGD:13792537 NCBI chr14:97,602,829...97,621,233
Ensembl chr14:97,603,539...97,621,262
JBrowse link
G Pex14 peroxisomal biogenesis factor 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:159,399,776...159,536,260
Ensembl chr 5:159,399,776...159,536,272
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in ISO
IEA
IBA
(PMID:21976670)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:21976670 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431
JBrowse link
G Pex5l peroxisomal biogenesis factor 5-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:115,694,868...115,908,338
Ensembl chr 2:115,700,972...115,913,628
JBrowse link
protein import into peroxisome matrix, substrate release term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pex14 peroxisomal biogenesis factor 14 involved_in ISO (PMID:21976670) RGD PMID:21976670 NCBI chr 5:159,399,776...159,536,260
Ensembl chr 5:159,399,776...159,536,272
JBrowse link
protein import into peroxisome matrix, translocation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pex14 peroxisomal biogenesis factor 14 involved_in ISO (PMID:21525035) RGD PMID:21525035 NCBI chr 5:159,399,776...159,536,260
Ensembl chr 5:159,399,776...159,536,272
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in ISO (PMID:11336669), (PMID:7719337) RGD PMID:7719337 PMID:11336669 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431
JBrowse link
G Pex6 peroxisomal biogenesis factor 6 involved_in ISO (PMID:8670792) RGD PMID:8670792 NCBI chr 9:14,258,145...14,270,335
Ensembl chr 9:14,258,145...14,270,303
JBrowse link
protein import into peroxisome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pex16 peroxisomal biogenesis factor 16 involved_in ISO (PMID:12223482) RGD PMID:12223482 NCBI chr 3:78,347,212...78,352,603
Ensembl chr 3:78,343,164...78,353,207
JBrowse link
G Pex19 peroxisomal biogenesis factor 19 involved_in ISO
IBA
(PMID:11402059), (PMID:14709540)
PMID:21873635
RGD PMID:11402059 PMID:14709540 PMID:21873635 RGD:13792537 NCBI chr13:84,592,277...84,608,793
Ensembl chr13:84,592,312...84,608,608
JBrowse link
G Pex26 peroxisomal biogenesis factor 26 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:154,414,332...154,426,954
Ensembl chr 4:154,414,849...154,426,952
JBrowse link
G Pex3 peroxisomal biogenesis factor 3 involved_in ISO
IBA
(PMID:15007061)
PMID:21873635
RGD PMID:15007061 PMID:21873635 RGD:13792537 NCBI chr 1:7,912,508...7,954,474
Ensembl chr 1:7,912,506...7,954,518
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in ISO (PMID:14709540) RGD PMID:14709540 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431
JBrowse link
G Rab8b RAB8B, member RAS oncogene family involved_in ISO (PMID:18346465) RGD PMID:18346465 NCBI chr 8:67,458,921...67,536,466
Ensembl chr 8:67,458,923...67,536,384
JBrowse link
protein targeting to peroxisome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hacl1 2-hydroxyacyl-CoA lyase 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:10468558)
UniProt
RGD
PMID:10468558 GO_REF:0000024 NCBI chr16:6,826,881...6,863,027
Ensembl chr16:6,824,906...6,863,027
JBrowse link
G Lonp2 lon peptidase 2, peroxisomal involved_in IBA
ISO
PMID:21873635
(PMID:18281296)
RGD PMID:18281296 PMID:21873635 RGD:13792537 NCBI chr19:20,407,475...20,499,030
Ensembl chr19:20,407,477...20,499,014
JBrowse link
G Pex1 peroxisomal biogenesis factor 1 involved_in ISO (PMID:11439091), (PMID:16854980) RGD PMID:11439091 PMID:16854980 NCBI chr 4:30,519,950...30,558,953
Ensembl chr 4:30,519,955...30,558,921
JBrowse link
G Pex16 peroxisomal biogenesis factor 16 involved_in ISO (PMID:9837814) RGD PMID:9837814 NCBI chr 3:78,347,212...78,352,603
Ensembl chr 3:78,343,164...78,353,207
JBrowse link
G Pex19 peroxisomal biogenesis factor 19 involved_in ISO (PMID:10704444), (PMID:16344115), (PMID:16763195), (PMID:19114594) RGD PMID:10704444 PMID:16344115 PMID:16763195 PMID:19114594 NCBI chr13:84,592,277...84,608,793
Ensembl chr13:84,592,312...84,608,608
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in ISO (PMID:9668159)
(PMID:21375735), (PMID:9668159)
RGD PMID:9668159 PMID:21375735 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431
JBrowse link
G Pex6 peroxisomal biogenesis factor 6 involved_in ISO (PMID:16854980) RGD PMID:16854980 NCBI chr 9:14,258,145...14,270,335
Ensembl chr 9:14,258,145...14,270,303
JBrowse link
G Pex7 peroxisomal biogenesis factor 7 acts_upstream_of_or_within ISO MGI:3052739 (MGI:3052413|PMID:12915479) RGD PMID:12915479 MGI:3052413 NCBI chr 1:14,582,698...14,646,686
Ensembl chr 1:14,582,699...14,646,748
JBrowse link
G Zfand6 zinc finger AN1-type containing 6 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:5427069|PMID:21980954)
PMID:21873635
UniProt
RGD
PMID:21980954 PMID:21873635 GO_REF:0000024 MGI:5427069, RGD:13792537 NCBI chr 1:138,581,002...138,652,052
Ensembl chr 1:138,581,002...138,651,939
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19497
    localization 6488
      cellular localization 3040
        intracellular transport 1604
          peroxisomal transport 22
            peroxisomal membrane transport + 20
            protein targeting to peroxisome + 18
Path 2
Term Annotations click to browse term
  biological_process 19497
    cellular process 18359
      cellular localization 3040
        establishment of localization in cell 2266
          intracellular transport 1604
            peroxisomal transport 22
              peroxisomal membrane transport + 20
              protein targeting to peroxisome + 18
paths to the root