Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:sequence-specific DNA binding
go back to main search page
Accession:GO:0043565 term browser browse the term
Definition:Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.


show annotations for term's descendants           Sort by:
 
sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07036007.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:30,441,055...30,444,565 JBrowse link
G Ahr aryl hydrocarbon receptor enables ISO (MGI:49394|PMID:1605850) RGD PMID:1605850 MGI:49394 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464
JBrowse link
G Alx1 ALX homeobox 1 enables ISO (MGI:1314705|PMID:9847249) RGD PMID:9847249 MGI:1314705 NCBI chr 7:44,751,865...44,771,458
Ensembl chr 7:44,751,873...44,771,458
JBrowse link
G Alx4 ALX homeobox 4 enables ISO (MGI:1290111|PMID:9786416) RGD PMID:9786416 MGI:1290111 NCBI chr 3:82,548,959...82,585,531
Ensembl chr 3:82,548,959...82,585,531
JBrowse link
G Ar androgen receptor enables IDA
ISO
(MGI:65622|PMID:8119157) RGD PMID:8119157, PMID:10385402 MGI:65622, RGD:10043317 NCBI chr  X:67,656,253...67,828,998
Ensembl chr  X:67,656,253...67,829,026
JBrowse link
G Arid5a AT-rich interaction domain 5A enables ISO (PMID:15640446) RGD PMID:15640446 NCBI chr 9:42,871,907...42,886,725
Ensembl chr 9:42,871,950...42,884,855
JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator contributes_to
enables
IDA
ISO
(MGI:5927132|PMID:26245371)
(PMID:7539918)
RGD PMID:7539918 PMID:26245371, PMID:11029639 MGI:5927132, RGD:2301215 NCBI chr 2:196,594,178...196,651,486
Ensembl chr 2:196,594,303...196,651,179
JBrowse link
G Arntl aryl hydrocarbon receptor nuclear translocator-like enables ISS
ISO
GO_REF:0000024
(MGI:5567903|PMID:21613214)
UniProt
RGD
PMID:21613214 GO_REF:0000024 MGI:5567903 NCBI chr 1:178,039,002...178,137,469
Ensembl chr 1:178,039,063...178,137,465
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 enables ISO (MGI:3703099|PMID:17141158) RGD PMID:17141158 MGI:3703099 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 enables ISO (MGI:1270969|PMID:9676199) RGD PMID:9676199 MGI:1270969 NCBI chr 1:216,154,002...216,156,409
Ensembl chr 1:216,154,002...216,156,409
JBrowse link
G Atf1 activating transcription factor 1 IDA RGD PMID:15084519 RGD:2312278 NCBI chr 7:141,882,261...141,924,790
Ensembl chr 7:141,882,251...141,924,788
JBrowse link
G Atf2 activating transcription factor 2 enables IDA
ISO
(MGI:5882896|PMID:15916964) RGD PMID:15916964, PMID:17428807 MGI:5882896, RGD:2290488 NCBI chr 3:60,721,137...60,795,951
Ensembl chr 3:60,721,135...60,795,951
JBrowse link
G Atf4 activating transcription factor 4 enables ISO (PMID:22915762) RGD PMID:22915762 NCBI chr 7:121,480,723...121,482,781
Ensembl chr 7:121,480,723...121,482,772
JBrowse link
G Atf5 activating transcription factor 5 enables IDA
ISO
PMID:19531563
(MGI:5688824|PMID:24216764)
RGD PMID:24216764, PMID:19531563 MGI:5688824, RGD:10400874 NCBI chr 1:100,807,821...100,812,410
Ensembl chr 1:100,808,241...100,810,522
JBrowse link
G Atf6 activating transcription factor 6 enables ISO (PMID:28473536) RGD PMID:28473536 NCBI chr13:89,053,457...89,242,531
Ensembl chr13:89,055,983...89,242,443
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 enables ISO (MGI:3655787|PMID:16679559) RGD PMID:16679559 MGI:3655787 NCBI chr 4:95,498,003...95,500,098
Ensembl chr 4:95,498,003...95,500,089
JBrowse link
G Barx2 BARX homeobox 2 enables ISO (MGI:3578585|PMID:15800003) RGD PMID:15800003 MGI:3578585 NCBI chr 8:32,950,878...33,018,245
Ensembl chr 8:32,950,875...33,017,854
JBrowse link
G Batf basic leucine zipper ATF-like transcription factor enables ISS
ISO
GO_REF:0000024
(MGI:3851267|PMID:19578362), (MGI:5004732|PMID:21572431), (MGI:5441724|PMID:22992524), (MGI:5444779|PMID:22992523), (MGI:5448096|PMID:22983707)
UniProt
RGD
PMID:19578362 PMID:21572431 PMID:22983707 PMID:22992523 PMID:22992524 GO_REF:0000024 MGI:3851267 MGI:5004732 MGI:5441724 MGI:5444779 MGI:5448096 NCBI chr 6:109,562,415...109,584,541
Ensembl chr 6:109,562,587...109,584,545
JBrowse link
G Bcl11b BAF chromatin remodeling complex subunit BCL11B enables ISO (MGI:3808092|PMID:16809611) RGD PMID:16809611 MGI:3808092 NCBI chr 6:131,834,097...131,927,251
Ensembl chr 6:131,834,097...131,926,272
JBrowse link
G Bcl2 BCL2, apoptosis regulator enables ISO (PMID:12086670) RGD PMID:12086670 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Bcl6 BCL6, transcription repressor enables ISO (PMID:15577913)
(MGI:3578694|PMID:15659391)
RGD PMID:15577913 PMID:15659391 MGI:3578694 NCBI chr11:80,255,790...80,279,075
Ensembl chr11:80,255,790...80,279,075
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger enables ISO (MGI:4838928|PMID:20956546) RGD PMID:20956546 MGI:4838928 NCBI chr17:85,360,439...85,370,283
Ensembl chr17:85,364,483...85,368,208
JBrowse link
G Bptf bromodomain PHD finger transcription factor enables ISO (PMID:10403843), (PMID:10575013) RGD PMID:10403843 PMID:10575013 NCBI chr10:95,248,573...95,350,162
Ensembl chr10:95,250,294...95,349,789
JBrowse link
G Bsx brain specific homeobox enables ISO (MGI:3713592|PMID:17353277)
(MGI:3715394|PMID:17550780)
RGD PMID:17353277 PMID:17550780 MGI:3713592 MGI:3715394 NCBI chr 8:45,061,670...45,065,430
Ensembl chr 8:45,061,670...45,065,430
JBrowse link
G Calcoco1 calcium binding and coiled coil domain 1 enables ISO (PMID:16344550) RGD PMID:16344550 NCBI chr 7:144,307,562...144,322,253
Ensembl chr 7:144,307,509...144,322,240
Ensembl chr 7:144,307,509...144,322,240
JBrowse link
G Camta1 calmodulin binding transcription activator 1 enables ISO (MGI:5578376|PMID:25049392) RGD PMID:25049392 MGI:5578376 NCBI chr 5:168,138,207...169,017,295
Ensembl chr 5:168,141,372...169,017,295
JBrowse link
G Camta2 calmodulin binding transcription activator 2 enables ISO (MGI:5578376|PMID:25049392) RGD PMID:25049392 MGI:5578376 NCBI chr10:57,291,192...57,309,638
Ensembl chr10:57,291,192...57,309,298
JBrowse link
G Cbfb core-binding factor subunit beta contributes_to ISO
IBA
(MGI:3772948|PMID:18258917)
PMID:21873635
RGD PMID:18258917, PMID:21873635 MGI:3772948, RGD:13792537 NCBI chr19:37,127,508...37,171,075
Ensembl chr19:37,127,508...37,171,069
JBrowse link
G Cdx2 caudal type homeo box 2 enables ISO (MGI:4367296|PMID:19796622) RGD PMID:19796622 MGI:4367296 NCBI chr12:9,464,026...9,470,565
Ensembl chr12:9,464,026...9,470,565
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha contributes_to
enables
IDA
ISO
PMID:8657121
(MGI:2152476|PMID:11672531)
PMID:20176812
RGD PMID:11672531, PMID:8657121, PMID:20176812 MGI:2152476, RGD:1599740, RGD:10047378 NCBI chr 1:91,363,492...91,366,164
Ensembl chr 1:91,363,492...91,366,164
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta enables IDA
ISO
(MGI:1350518|PMID:10588870), (MGI:3578694|PMID:15659391), (MGI:5688824|PMID:24216764) RGD PMID:10588870 PMID:15659391 PMID:24216764, PMID:14661739 MGI:1350518 MGI:3578694 MGI:5688824, RGD:2303385 NCBI chr 3:164,424,502...164,425,933
Ensembl chr 3:164,424,515...164,425,910
JBrowse link
G Cebpd CCAAT/enhancer binding protein delta IDA RGD PMID:11792653 RGD:625506 NCBI chr11:89,008,008...89,009,146
Ensembl chr11:89,008,008...89,009,146
JBrowse link
G Cebpg CCAAT/enhancer binding protein gamma enables ISO
ISS
(PMID:7665092)
GO_REF:0000024
RGD
UniProt
PMID:7665092 GO_REF:0000024 NCBI chr 1:91,286,956...91,297,459
Ensembl chr 1:91,287,917...91,296,656
JBrowse link
G Chchd2 coiled-coil-helix-coiled-coil-helix domain containing 2 enables ISO (PMID:23303788) RGD PMID:23303788 NCBI chr 9:101,388,148...101,388,819
Ensembl chr 9:101,388,151...101,388,833
JBrowse link
G Clock clock circadian regulator enables ISS
ISO
GO_REF:0000024
(MGI:5567903|PMID:21613214)
UniProt
RGD
PMID:21613214 GO_REF:0000024 MGI:5567903 NCBI chr14:34,418,226...34,502,218
Ensembl chr14:34,446,616...34,502,218
JBrowse link
G Creb1 cAMP responsive element binding protein 1 enables IDA
ISO
(MGI:3042355|PMID:15030764) RGD PMID:15030764, PMID:16959941, PMID:16891311, PMID:15632413, PMID:12697699 MGI:3042355, RGD:1599906, RGD:1625706, RGD:1643534, RGD:1624302 NCBI chr 9:71,229,753...71,298,994
Ensembl chr 9:71,230,108...71,293,435
JBrowse link
G Creb3 cAMP responsive element binding protein 3 enables ISO (MGI:65061|PMID:8112612) RGD PMID:8112612 MGI:65061 NCBI chr 5:59,063,532...59,068,196
Ensembl chr 5:59,063,531...59,068,188
JBrowse link
G Csrnp1 cysteine and serine rich nuclear protein 1 enables IBA
ISO
PMID:21873635
(MGI:3769171|PMID:17726538)
RGD PMID:17726538, PMID:21873635 MGI:3769171, RGD:13792537 NCBI chr 8:128,659,883...128,673,339
Ensembl chr 8:128,659,868...128,672,284
JBrowse link
G Csrnp2 cysteine and serine rich nuclear protein 2 enables IBA
ISO
PMID:21873635
(MGI:3769171|PMID:17726538)
RGD PMID:17726538, PMID:21873635 MGI:3769171, RGD:13792537 NCBI chr 7:142,116,335...142,132,173
Ensembl chr 7:142,116,335...142,132,173
JBrowse link
G Csrnp3 cysteine and serine rich nuclear protein 3 enables IBA
ISO
PMID:21873635
(MGI:3769171|PMID:17726538)
RGD PMID:17726538, PMID:21873635 MGI:3769171, RGD:13792537 NCBI chr 3:51,883,559...52,120,290
Ensembl chr 3:51,883,559...52,120,290
JBrowse link
G Ctcf CCCTC-binding factor enables ISO (PMID:17827499)
(MGI:2182888|PMID:12075007)
RGD PMID:12075007 PMID:17827499 MGI:2182888 NCBI chr19:37,600,151...37,649,674
Ensembl chr19:37,600,148...37,649,673
JBrowse link
G Ctcfl CCCTC-binding factor like enables ISO (MGI:3692841|PMID:17048991) RGD PMID:17048991 MGI:3692841 NCBI chr 3:171,145,203...171,168,375
Ensembl chr 3:171,145,584...171,166,454
JBrowse link
G Cux1 cut-like homeobox 1 enables ISO (PMID:15656993)
(MGI:60219|PMID:1363085)
RGD PMID:1363085 PMID:15656993 MGI:60219 NCBI chr12:23,150,886...23,470,095
Ensembl chr12:23,151,180...23,445,074
JBrowse link
G Cux2 cut-like homeobox 2 enables ISO (PMID:15656993) RGD PMID:15656993 NCBI chr12:40,016,774...40,221,067
Ensembl chr12:40,018,937...40,219,291
JBrowse link
G Cxxc5 CXXC finger protein 5 enables ISS
ISO
GO_REF:0000024
(PMID:23303788)
UniProt
RGD
PMID:23303788 GO_REF:0000024 NCBI chr18:28,626,386...28,656,916
Ensembl chr18:28,653,592...28,656,937
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 contributes_to IDA PMID:8657121 ParkinsonsUK-UCL PMID:8657121 RGD:1599740 NCBI chr 7:70,578,564...70,585,074
Ensembl chr 7:70,580,198...70,585,084
JBrowse link
G Dlx4 distal-less homeobox 4 enables ISO (PMID:9073066) RGD PMID:9073066 NCBI chr10:82,958,525...82,963,919
Ensembl chr10:82,958,525...82,963,919
JBrowse link
G Dmbx1 diencephalon/mesencephalon homeobox 1 enables ISO (MGI:3583840|PMID:15890343) RGD PMID:15890343 MGI:3583840 NCBI chr 5:134,767,436...134,792,840
Ensembl chr 5:134,767,436...134,776,247
JBrowse link
G Dmrt1 doublesex and mab-3 related transcription factor 1 enables ISO (MGI:5474771|PMID:17605809) RGD PMID:17605809 MGI:5474771 NCBI chr 1:243,477,403...243,582,629
Ensembl chr 1:243,477,493...243,582,629
JBrowse link
G Dmrt2 doublesex and mab-3 related transcription factor 2 enables ISO (MGI:5474771|PMID:17605809) RGD PMID:17605809 MGI:5474771 NCBI chr 1:243,662,819...243,669,312
Ensembl chr 1:243,662,823...243,669,312
JBrowse link
G Dmrt3 doublesex and mab-3 related transcription factor 3 enables ISO (MGI:5474771|PMID:17605809) RGD PMID:17605809 MGI:5474771 NCBI chr 1:243,589,607...243,602,926
Ensembl chr 1:243,589,607...243,602,926
JBrowse link
G Dmrta1 DMRT-like family A1 enables ISO (MGI:5474771|PMID:17605809) RGD PMID:17605809 MGI:5474771 NCBI chr 5:108,278,217...108,284,757
Ensembl chr 5:108,278,217...108,284,757
JBrowse link
G Dmrta2 DMRT-like family A2 enables ISO (MGI:5474771|PMID:17605809) RGD PMID:17605809 MGI:5474771 NCBI chr 5:129,754,295...129,760,045
Ensembl chr 5:129,756,149...129,758,986
JBrowse link
G Dmrtb1 DMRT-like family B with proline-rich C-terminal, 1 NOT|enables ISO (MGI:5474771|PMID:17605809) RGD PMID:17605809 MGI:5474771 NCBI chr 5:127,266,824...127,273,656
Ensembl chr 5:127,266,824...127,273,656
JBrowse link
G Dmrtc2 DMRT-like family C2 enables ISO (MGI:5474771|PMID:17605809) RGD PMID:17605809 MGI:5474771 NCBI chr 1:81,734,256...81,741,419
Ensembl chr 1:81,736,335...81,741,345
Ensembl chr 9:81,736,335...81,741,345
JBrowse link
G E2f1 E2F transcription factor 1 enables IDA
ISO
(MGI:2152476|PMID:11672531)
(PMID:23332764)
RGD PMID:11672531 PMID:23332764, PMID:18096822 MGI:2152476, RGD:2316264 NCBI chr 3:150,062,895...150,073,721
Ensembl chr 3:150,047,826...150,073,721
JBrowse link
G E2f2 E2F transcription factor 2 enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr 5:154,516,611...154,540,228
Ensembl chr 5:154,522,119...154,540,265
JBrowse link
G E2f3 E2F transcription factor 3 enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr17:36,334,136...36,408,831
Ensembl chr17:36,334,147...36,408,831
JBrowse link
G E2f5 E2F transcription factor 5 IDA RGD PMID:12063292 RGD:625751 NCBI chr 2:88,350,764...88,366,913
Ensembl chr 2:88,351,361...88,366,115
JBrowse link
G E2f6 E2F transcription factor 6 enables ISO (MGI:3814987|PMID:18667754) RGD PMID:18667754 MGI:3814987 NCBI chr 6:42,092,513...42,108,692
Ensembl chr 6:42,092,467...42,108,702
JBrowse link
G Egr1 early growth response 1 enables IDA
ISO
(PMID:1662794), (PMID:25258363) RGD PMID:1662794 PMID:25258363, PMID:10837920 RGD:1626488 NCBI chr18:27,657,903...27,660,101
Ensembl chr18:27,657,628...27,661,429
JBrowse link
G Egr2 early growth response 2 enables ISO
ISS
(PMID:17717711)
(MGI:52248|PMID:8093858), (MGI:6393337|PMID:11823429)
GO_REF:0000024
RGD
UniProt
PMID:8093858 PMID:11823429 PMID:17717711 GO_REF:0000024 MGI:52248 MGI:6393337 NCBI chr20:22,452,170...22,461,018
Ensembl chr20:22,454,463...22,459,025
JBrowse link
G Egr3 early growth response 3 enables ISO (MGI:5902677|PMID:23332764) RGD PMID:23332764 MGI:5902677 NCBI chr15:51,756,683...51,762,080
Ensembl chr15:51,756,736...51,760,722
JBrowse link
G Egr4 early growth response 4 enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr 4:117,293,620...117,296,082
Ensembl chr 4:117,293,620...117,296,082
JBrowse link
G Elf2 E74 like ETS transcription factor 2 enables ISO (PMID:14970218) RGD PMID:14970218 NCBI chr 2:140,310,374...140,399,312
Ensembl chr 2:140,310,375...140,387,505
JBrowse link
G Elk3 ETS transcription factor ELK3 enables ISO (MGI:4830801|PMID:20304071) RGD PMID:20304071 MGI:4830801 NCBI chr 7:34,086,213...34,149,601
Ensembl chr 7:34,086,220...34,121,694
JBrowse link
G Eomes eomesodermin enables ISO (PMID:20713518) RGD PMID:20713518 NCBI chr 8:127,144,367...127,152,618
Ensembl chr 8:127,144,903...127,151,493
JBrowse link
G Epas1 endothelial PAS domain protein 1 contributes_to
enables
IDA
ISO
(MGI:5927132|PMID:26245371)
(PMID:9079689)
RGD PMID:9079689 PMID:26245371, PMID:12675925 MGI:5927132, RGD:632652 NCBI chr 6:10,306,508...10,385,239
Ensembl chr 6:10,306,405...10,387,265
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor enables ISO (PMID:22483866) RGD PMID:22483866 NCBI chr16:8,734,028...8,804,610
Ensembl chr16:8,734,035...8,804,610
JBrowse link
G Erf Ets2 repressor factor enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr 1:82,112,449...82,120,902
Ensembl chr 1:82,112,449...82,120,902
JBrowse link
G Esr1 estrogen receptor 1 enables IEA
ISO
GO_REF:0000002
(MGI:5825439|PMID:9448000)
InterPro
RGD
PMID:9448000 GO_REF:0000002 MGI:5825439 NCBI chr 1:41,192,029...41,594,799
Ensembl chr 1:41,192,824...41,594,796
JBrowse link
G Esr2 estrogen receptor 2 enables IDA
IEA
GO_REF:0000002 InterPro PMID:12200235 GO_REF:0000002, RGD:1582280 NCBI chr 6:99,163,953...99,214,711
Ensembl chr 6:99,164,357...99,214,251
JBrowse link
G Esrra estrogen related receptor, alpha enables IDA
IEA
ISO
ISS
GO_REF:0000002
(PMID:23836911)
GO_REF:0000024
InterPro
RGD
UniProt
PMID:23836911, PMID:20215575 GO_REF:0000002 GO_REF:0000024, RGD:10401858 NCBI chr 1:222,168,729...222,178,842
Ensembl chr 1:222,168,730...222,178,725
JBrowse link
G Esrrb estrogen-related receptor beta enables ISS
ISO
GO_REF:0000024
(MGI:5823092|PMID:27723719), (MGI:5824766|PMID:27601327), (MGI:5882869|PMID:23169531)
(PMID:12654265)
UniProt
RGD
PMID:12654265 PMID:23169531 PMID:27601327 PMID:27723719 GO_REF:0000024 MGI:5823092 MGI:5824766 MGI:5882869 NCBI chr 6:110,360,940...110,458,406
Ensembl chr 6:110,410,141...110,455,906
JBrowse link
G Esx1 ESX homeobox 1 enables ISO (PMID:15897875) RGD PMID:15897875 NCBI chr  X:107,753,614...107,763,561 JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor enables IDA
ISO
(MGI:51207|PMID:1409581) RGD PMID:1409581, PMID:8635216 MGI:51207, RGD:2313682 NCBI chr 8:33,756,634...33,879,625
Ensembl chr 8:33,816,386...33,879,625
JBrowse link
G Ets2 ETS proto-oncogene 2, transcription factor enables ISO (MGI:51207|PMID:1409581) RGD PMID:1409581 MGI:51207 NCBI chr11:36,075,709...36,092,495
Ensembl chr11:36,075,709...36,092,495
JBrowse link
G Etv3l ETS variant transcription factor 3 like enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:186,899,060...186,911,913
Ensembl chr 2:186,899,324...186,911,903
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit enables ISO (MGI:4838928|PMID:20956546) RGD PMID:20956546 MGI:4838928 NCBI chr 4:77,284,404...77,347,011
Ensembl chr 4:77,284,404...77,347,011
JBrowse link
G Fezf1 Fez family zinc finger 1 enables ISO (MGI:5908758|PMID:28245922) RGD PMID:28245922 MGI:5908758 NCBI chr 4:50,309,281...50,312,608
Ensembl chr 4:50,309,281...50,312,608
JBrowse link
G Fezf2 Fez family zinc finger 2 enables ISO (MGI:5908758|PMID:28245922) RGD PMID:28245922 MGI:5908758 NCBI chr15:12,825,333...12,831,496
Ensembl chr15:12,827,707...12,831,496
JBrowse link
G Figla folliculogenesis specific bHLH transcription factor contributes_to ISO (PMID:15044608) RGD PMID:15044608 NCBI chr 4:117,679,256...117,683,618
Ensembl chr 4:117,679,342...117,683,411
JBrowse link
G Fli1 Fli-1 proto-oncogene, ETS transcription factor enables ISO (MGI:5289737|PMID:21867929) RGD PMID:21867929 MGI:5289737 NCBI chr 8:33,541,932...33,661,111
Ensembl chr 8:33,543,258...33,661,049
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit IDA RGD PMID:10830307 RGD:1626699 NCBI chr 6:109,300,433...109,303,299
Ensembl chr 6:109,300,433...109,303,299
JBrowse link
G Fosb FosB proto-oncogene, AP-1 transcription factor subunit IDA RGD PMID:10830307 RGD:1626699 NCBI chr 1:80,214,691...80,221,417
Ensembl chr 1:80,214,494...80,221,710
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit IDA RGD PMID:10830307 RGD:1626699 NCBI chr 6:25,598,936...25,616,995
Ensembl chr 6:25,598,936...25,616,995
JBrowse link
G Foxa1 forkhead box A1 enables IDA
ISO
(MGI:5435638|PMID:22737085), (MGI:64328|PMID:8306889) RGD PMID:8306889 PMID:22737085, PMID:2227418 MGI:5435638 MGI:64328, RGD:632942 NCBI chr 6:78,516,579...78,549,669
Ensembl chr 6:78,545,804...78,549,669
JBrowse link
G Foxa2 forkhead box A2 enables IDA
ISO
(MGI:2180986|PMID:11914369), (MGI:3037232|PMID:14701942), (MGI:5435638|PMID:22737085) RGD PMID:11914369 PMID:14701942 PMID:22737085, PMID:17408383 MGI:2180986 MGI:3037232 MGI:5435638, RGD:1626707 NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
JBrowse link
G Foxa3 forkhead box A3 enables ISO (MGI:64328|PMID:8306889) RGD PMID:8306889 MGI:64328 NCBI chr 1:79,921,292...79,930,219
Ensembl chr 1:79,920,752...79,930,263
JBrowse link
G Foxb1 forkhead box B1 enables ISS
ISO
GO_REF:0000024
(MGI:64328|PMID:8306889)
UniProt
RGD
PMID:8306889 GO_REF:0000024 MGI:64328 NCBI chr 8:75,992,751...75,995,371
Ensembl chr 8:75,992,755...75,995,371
JBrowse link
G Foxc1 forkhead box C1 enables ISO (PMID:15277473), (PMID:7957066) RGD PMID:7957066 PMID:15277473 NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484
JBrowse link
G Foxc2 forkhead box C2 enables ISO (PMID:16081467) RGD PMID:16081467 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Foxd1 forkhead box D1 enables ISO (PMID:7957066)
(MGI:2675756|PMID:13678594)
RGD PMID:7957066 PMID:13678594 MGI:2675756 NCBI chr 2:28,460,068...28,462,488
Ensembl chr 2:28,460,068...28,462,488
JBrowse link
G Foxd2 forkhead box D2 enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr 5:133,707,194...133,710,186
Ensembl chr 5:133,708,228...133,709,712
JBrowse link
G Foxe1 forkhead box E1 enables ISO (PMID:12165566), (PMID:16882747), (PMID:20094846), (PMID:20484477), (PMID:21177256), (PMID:24219130), (PMID:9697705) RGD PMID:9697705 PMID:12165566 PMID:16882747 PMID:20094846 PMID:20484477 PMID:21177256 PMID:24219130 NCBI chr 5:61,954,549...61,957,357
Ensembl chr 5:61,954,549...61,957,357
JBrowse link
G Foxe3 forkhead box E3 enables ISS
ISO
PMID:11980846
(MGI:2179783|PMID:11980846)
RGD PMID:11980846, PMID:11980846 MGI:2179783, RGD:10047345 NCBI chr 5:133,724,796...133,725,656
Ensembl chr 5:133,724,796...133,725,656
JBrowse link
G Foxf2 forkhead box F2 enables ISO (PMID:7957066), (PMID:8626802) RGD PMID:7957066 PMID:8626802 NCBI chr17:34,150,417...34,156,450 JBrowse link
G Foxg1 forkhead box G1 enables ISO (MGI:5902677|PMID:23332764) RGD PMID:23332764 MGI:5902677 NCBI chr 6:69,971,227...69,974,037
Ensembl chr 6:69,971,227...69,974,037
JBrowse link
G Foxh1 forkhead box H1 enables ISO (PMID:9702198)
(MGI:3716271|PMID:17568773)
RGD PMID:9702198 PMID:17568773 MGI:3716271 NCBI chr 7:117,730,307...117,733,076
Ensembl chr 7:117,730,307...117,732,387
JBrowse link
G Foxi1 forkhead box I1 enables ISO (MGI:3689809|PMID:16159312) RGD PMID:16159312 MGI:3689809 NCBI chr10:19,160,566...19,164,505
Ensembl chr10:19,160,582...19,164,505
JBrowse link
G Foxi2 forkhead box I2 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:207,653,704...207,656,831
Ensembl chr 1:207,654,487...207,656,138
JBrowse link
G Foxj2 forkhead box J2 enables ISO (PMID:10777590) RGD PMID:10777590 NCBI chr 4:155,653,446...155,679,815
Ensembl chr 4:155,653,718...155,679,793
JBrowse link
G Foxj3 forkhead box J3 enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr 5:138,587,968...138,676,948
Ensembl chr 5:138,605,793...138,676,962
JBrowse link
G Foxk1 forkhead box K1 enables ISO (MGI:1096643|PMID:9271401), (MGI:67110|PMID:8007964) RGD PMID:8007964 PMID:9271401 MGI:1096643 MGI:67110 NCBI chr12:14,183,436...14,244,634
Ensembl chr12:14,180,029...14,244,316
JBrowse link
G Foxk2 forkhead box K2 enables ISO (PMID:12402362), (PMID:1339390), (PMID:16624804), (PMID:1909027) RGD PMID:1339390 PMID:1909027 PMID:12402362 PMID:16624804 NCBI chr10:110,468,905...110,518,854
Ensembl chr10:110,469,290...110,518,848
JBrowse link
G Foxl1 forkhead box L1 enables ISO (PMID:7957066) RGD PMID:7957066 NCBI chr19:53,054,887...53,058,624
Ensembl chr19:53,055,745...53,056,770
JBrowse link
G Foxm1 forkhead box M1 enables IDA
IEA
GO_REF:0000002 InterPro PMID:9242644 GO_REF:0000002, RGD:61588 NCBI chr 4:161,685,236...161,697,633
Ensembl chr 4:161,685,258...161,696,305
JBrowse link
G Foxn1 forkhead box N1 enables ISO (MGI:87160|PMID:9108066) RGD PMID:9108066 MGI:87160 NCBI chr10:65,621,142...65,634,666
Ensembl chr10:65,621,257...65,634,666
JBrowse link
G Foxo1 forkhead box O1 enables IDA
ISO
ISS
(MGI:1934918|PMID:11353388)
GO_REF:0000024
(PMID:12228231)
RGD
UniProt
PMID:11353388 PMID:12228231, PMID:17916612 GO_REF:0000024 MGI:1934918, RGD:2302520 NCBI chr 2:141,451,234...141,527,016
Ensembl chr 2:141,451,234...141,527,016
JBrowse link
G Foxo3 forkhead box O3 enables ISO (PMID:10102273)
(MGI:1934918|PMID:11353388)
RGD PMID:10102273 PMID:11353388 MGI:1934918 NCBI chr20:46,428,078...46,519,156
Ensembl chr20:46,428,124...46,519,144
JBrowse link
G Foxo4 forkhead box O4 enables ISO (PMID:22972301), (PMID:23332764)
(MGI:1934918|PMID:11353388)
RGD PMID:11353388 PMID:22972301 PMID:23332764 MGI:1934918 NCBI chr  X:71,155,284...71,162,158
Ensembl chr  X:71,155,601...71,162,158
JBrowse link
G Foxp2 forkhead box P2 enables ISO (PMID:18987363) RGD PMID:18987363 NCBI chr 4:41,364,441...41,944,685
Ensembl chr 4:41,364,441...41,942,023
JBrowse link
G Foxp3 forkhead box P3 enables ISO (PMID:11483607), (PMID:16873067), (PMID:19276356)
(MGI:3697020|PMID:17028180)
RGD PMID:11483607 PMID:16873067 PMID:17028180 PMID:19276356 MGI:3697020 NCBI chr  X:15,753,175...15,768,648
Ensembl chr  X:15,753,175...15,768,522
JBrowse link
G Gata1 GATA binding protein 1 enables IDA
ISO
(MGI:1306996|PMID:9787185), (MGI:66763|PMID:8195185)
(MGI:77668|PMID:8524811)
(PMID:12200364)
RGD PMID:8195185 PMID:8524811 PMID:9787185 PMID:12200364, PMID:7957872 MGI:1306996 MGI:66763 MGI:77668, RGD:728595 NCBI chr  X:15,273,937...15,281,759
Ensembl chr  X:15,378,789...15,382,066
Ensembl chr  X:15,378,789...15,382,066
JBrowse link
G Gata2 GATA binding protein 2 IDA RGD PMID:11093771 RGD:9587814 NCBI chr 4:120,129,028...120,142,490
Ensembl chr 4:120,133,713...120,142,488
JBrowse link
G Gata3 GATA binding protein 3 enables IMP
ISO
(MGI:4939116|PMID:18621058), (MGI:5289737|PMID:21867929) RGD PMID:18621058 PMID:21867929, PMID:9125153 MGI:4939116 MGI:5289737, RGD:632696 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Gata4 GATA binding protein 4 enables IMP
ISO
(MGI:53125|PMID:8455608), (MGI:5901795|PMID:27783597), (MGI:81843|PMID:8754853) RGD PMID:8455608 PMID:8754853 PMID:27783597, PMID:12704188 MGI:53125 MGI:5901795 MGI:81843, RGD:1580391 NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965
JBrowse link
G Gata6 GATA binding protein 6 enables IDA
ISO
IEA
(MGI:2180986|PMID:11914369)
GO_REF:0000002
RGD
InterPro
PMID:11914369, PMID:8248184 GO_REF:0000002 MGI:2180986, RGD:728607 NCBI chr18:2,415,821...2,447,087
Ensembl chr18:2,416,552...2,446,338
JBrowse link
G Gatad1 GATA zinc finger domain containing 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:27,647,005...27,658,533
Ensembl chr 4:27,647,335...27,657,167
JBrowse link
G Gatad2b GATA zinc finger domain containing 2B enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:189,654,871...189,735,056
Ensembl chr 2:189,655,702...189,733,540
JBrowse link
G Gcm2 glial cells missing transcription factor 2 enables ISO (PMID:15863676), (PMID:20190276) RGD PMID:15863676 PMID:20190276 NCBI chr17:21,490,402...21,499,516
Ensembl chr17:21,490,402...21,499,516
JBrowse link
G Gli1 GLI family zinc finger 1 enables ISO (PMID:19706761) RGD PMID:19706761 NCBI chr 7:70,620,794...70,633,171
Ensembl chr 7:70,620,766...70,630,338
JBrowse link
G Gli2 GLI family zinc finger 2 enables ISO (PMID:15175043), (PMID:26565916), (PMID:9557682)
(MGI:3624046|PMID:16611981)
RGD PMID:9557682 PMID:15175043 PMID:16611981 PMID:26565916 MGI:3624046 NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
JBrowse link
G Gli3 GLI family zinc finger 3 enables ISO (MGI:3624046|PMID:16611981) RGD PMID:16611981 MGI:3624046 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Gmeb2 glucocorticoid modulatory element binding protein 2 enables IDA PMID:10894151 NTNU_SB PMID:10894151 RGD:12911012 NCBI chr 3:176,756,006...176,791,960
Ensembl chr 3:176,753,860...176,791,960
JBrowse link
G Grhl1 grainyhead-like transcription factor 1 enables ISO (PMID:18288204)
(MGI:3778256|PMID:18288204), (MGI:4881608|PMID:21081122)
RGD PMID:18288204 PMID:21081122 MGI:3778256 MGI:4881608 NCBI chr 6:43,734,837...43,795,757
Ensembl chr 6:43,743,702...43,794,342
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 enables ISO (PMID:19015635), (PMID:20938050)
(MGI:4881608|PMID:21081122)
RGD PMID:19015635 PMID:20938050 PMID:21081122 MGI:4881608 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
JBrowse link
G Grhl3 grainyhead-like transcription factor 3 enables ISO (MGI:2655016|PMID:12666198), (MGI:4881608|PMID:21081122) RGD PMID:12666198 PMID:21081122 MGI:2655016 MGI:4881608 NCBI chr 5:153,893,039...153,925,045
Ensembl chr 5:153,893,039...153,924,896
JBrowse link
G Gsc2 goosecoid homeobox 2 enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr11:87,220,618...87,222,606
Ensembl chr11:87,220,618...87,222,606
JBrowse link
G Gsx1 GS homeobox 1 enables ISO (MGI:74326|PMID:8589431), (MGI:79250|PMID:8631293)
(PMID:11731616)
RGD PMID:8589431 PMID:8631293 PMID:11731616 MGI:74326 MGI:79250 NCBI chr12:9,605,873...9,607,168
Ensembl chr12:9,605,873...9,607,168
JBrowse link
G Gzf1 GDNF-inducible zinc finger protein 1 enables ISS
ISO
GO_REF:0000024
(PMID:16049025)
UniProt
RGD
PMID:16049025 GO_REF:0000024 NCBI chr 3:143,003,706...143,015,906
Ensembl chr 3:143,003,796...143,015,904
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 enables ISO MGI:98510 (MGI:2429440|PMID:12070084) RGD PMID:12070084 MGI:2429440 NCBI chr10:43,250,729...43,253,296
Ensembl chr10:43,250,745...43,253,296
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 enables ISO MGI:98510 (MGI:2429440|PMID:12070084) RGD PMID:12070084 MGI:2429440 NCBI chr16:36,371,489...36,373,551
Ensembl chr16:36,371,489...36,373,546
JBrowse link
G Hdac2 histone deacetylase 2 enables ISO (PMID:19276356) RGD PMID:19276356 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Hdac4 histone deacetylase 4 contributes_to ISO (PMID:19276356) RGD PMID:19276356 NCBI chr 9:99,052,945...99,299,715
Ensembl chr 9:99,057,089...99,299,715
JBrowse link
G Hes1 hes family bHLH transcription factor 1 enables IDA PMID:11486045 BHF-UCL PMID:11486045 RGD:8553415 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hesx1 HESX homeobox 1 enables ISO (MGI:6478083|PMID:19879326), (MGI:6478537|PMID:12063185) RGD PMID:12063185 PMID:19879326 MGI:6478083 MGI:6478537 NCBI chr16:2,616,538...2,636,708
Ensembl chr16:2,634,603...2,636,708
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 enables ISO (MGI:5427763|PMID:22615585) RGD PMID:22615585 MGI:5427763 NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 enables ISO (PMID:11486045)
(MGI:5427763|PMID:22615585)
RGD PMID:11486045 PMID:22615585 MGI:5427763 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
JBrowse link
G Heyl hes-related family bHLH transcription factor with YRPW motif-like enables ISO (MGI:5427763|PMID:22615585) RGD PMID:22615585 MGI:5427763 NCBI chr 5:140,923,914...140,940,905
Ensembl chr 5:140,923,914...140,940,905
JBrowse link
G Hhex hematopoietically expressed homeobox enables IDA
ISO
(PMID:10871399) RGD PMID:10871399, PMID:11139473 RGD:2314899 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649
JBrowse link
G Hic1 HIC ZBTB transcriptional repressor 1 enables ISO (PMID:15231840) RGD PMID:15231840 NCBI chr10:62,007,150...62,010,774
Ensembl chr10:62,007,150...62,009,582
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha enables
contributes_to
IDA
ISO
(MGI:1306687|PMID:9368100), (MGI:5574277|PMID:24030251), (MGI:5927132|PMID:26245371)
(PMID:7539918), (PMID:8756616), (PMID:9079689)
RGD PMID:7539918 PMID:8756616 PMID:9079689 PMID:9368100 PMID:24030251 PMID:26245371, PMID:18614764 MGI:1306687 MGI:5574277 MGI:5927132, RGD:2301848 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Hlf HLF transcription factor, PAR bZIP family member enables ISO (PMID:8065331) RGD PMID:8065331 NCBI chr10:77,836,352...77,918,656
Ensembl chr10:77,840,568...77,918,191
JBrowse link
G Hlx H2.0-like homeobox enables IBA
ISO
PMID:21873635
(PMID:9073066)
RGD PMID:9073066, PMID:21873635 RGD:13792537 NCBI chr13:102,637,967...102,643,376
Ensembl chr13:102,637,769...102,643,223
JBrowse link
G Hmbox1 homeobox containing 1 enables ISO (PMID:23332764), (PMID:28473536) RGD PMID:23332764 PMID:28473536 NCBI chr15:48,194,709...48,326,310
Ensembl chr15:48,199,995...48,284,548
JBrowse link
G Hmx3 H6 family homeobox 3 enables ISO (MGI:3773266|PMID:10206974) RGD PMID:10206974 MGI:3773266 NCBI chr 1:203,509,731...203,511,695
Ensembl chr 1:203,509,731...203,511,695
JBrowse link
G Hnf1a HNF1 homeobox A IDA RGD PMID:14561216, PMID:12753154 RGD:1599297, RGD:1599299 NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342
JBrowse link
G Hnf1b HNF1 homeobox B IDA RGD PMID:12860991 RGD:1599302 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha enables IMP
ISO
IEA
(MGI:64328|PMID:8306889)
GO_REF:0000002
RGD
InterPro
PMID:8306889, PMID:16893891 GO_REF:0000002 MGI:64328, RGD:1624992 NCBI chr 3:159,902,441...159,965,003
Ensembl chr 3:159,902,441...159,965,003
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U enables ISS
ISO
GO_REF:0000024
(MGI:5908336|PMID:21235343)
UniProt
RGD
PMID:21235343 GO_REF:0000024 MGI:5908336 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G Hopx HOP homeobox NOT|enables ISO (MGI:2387286|PMID:12297045) RGD PMID:12297045 MGI:2387286 NCBI chr14:33,354,803...33,362,547
Ensembl chr14:33,354,807...33,362,551
JBrowse link
G Hoxa1 homeobox A1 enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066
JBrowse link
G Hoxa13 homeo box A13 enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr 4:82,313,383...82,315,550
Ensembl chr 4:82,228,017...82,229,397
JBrowse link
G Hoxa2 homeobox A2 enables ISO (MGI:3525808|PMID:15634706) RGD PMID:15634706 MGI:3525808 NCBI chr 4:82,130,441...82,134,846
Ensembl chr 4:82,131,329...82,133,605
JBrowse link
G Hoxa7 homeobox A7 enables ISO (PMID:11435435) RGD PMID:11435435 NCBI chr 4:82,184,299...82,187,890
Ensembl chr 4:82,183,196...82,186,190
JBrowse link
G Hoxb1 homeo box B1 enables ISO MGI:97495 (MGI:3817812|PMID:18787068) RGD PMID:18787068 MGI:3817812 NCBI chr10:84,214,358...84,215,812
Ensembl chr10:84,214,358...84,215,687
JBrowse link
G Hoxb13 homeo box B13 enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr10:84,031,955...84,034,228
Ensembl chr10:84,031,955...84,034,228
JBrowse link
G Hoxb2 homeobox B2 enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr10:84,200,859...84,203,065
Ensembl chr10:84,200,880...84,202,688
JBrowse link
G Hoxb8 homeo box B8 enables ISO (MGI:5902688|PMID:11571641) RGD PMID:11571641 MGI:5902688 NCBI chr10:84,131,484...84,133,874
Ensembl chr10:84,131,495...84,133,246
JBrowse link
G Hsf1 heat shock transcription factor 1 enables ISO (PMID:25963659)
(MGI:3821682|PMID:18755693)
RGD PMID:18755693 PMID:25963659 MGI:3821682 NCBI chr 7:117,538,523...117,565,478
Ensembl chr 7:117,538,523...117,565,478
JBrowse link
G Hsf2 heat shock transcription factor 2 enables ISO (MGI:3821682|PMID:18755693) RGD PMID:18755693 MGI:3821682 NCBI chr20:38,935,820...38,963,444
Ensembl chr20:38,935,820...38,963,309
JBrowse link
G Hsf4 heat shock transcription factor 4 enables IDA
ISO
alphaB-crystallin promoter HSE
(MGI:3821682|PMID:18755693)
RGD PMID:18755693, PMID:15308659 MGI:3821682, RGD:1599777 NCBI chr19:37,225,800...37,232,048
Ensembl chr19:37,226,186...37,231,912
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 enables ISO MGI:2158738 (MGI:68746|PMID:7923373) RGD PMID:7923373 MGI:68746 NCBI chr14:91,782,281...91,867,828
Ensembl chr14:91,782,354...91,867,424
JBrowse link
G Ikzf3 IKAROS family zinc finger 3 enables ISO (MGI:87362|PMID:9155026) RGD PMID:9155026 MGI:87362 NCBI chr10:86,420,757...86,509,454
Ensembl chr10:86,421,582...86,509,454
JBrowse link
G Ikzf4 IKAROS family zinc finger 4 enables ISO (MGI:5499082|PMID:22638570) RGD PMID:22638570 MGI:5499082 NCBI chr 7:3,061,422...3,098,142
Ensembl chr 7:3,061,469...3,074,359
JBrowse link
G Irf1 interferon regulatory factor 1 enables IDA
ISO
(MGI:3709230|PMID:17159910) RGD PMID:17159910, PMID:11880315 MGI:3709230, RGD:5128716 NCBI chr10:39,109,530...39,116,532
Ensembl chr10:39,109,522...39,116,531
JBrowse link
G Irf3 interferon regulatory factor 3 enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr 1:100,992,244...100,997,202
Ensembl chr 1:100,992,405...100,997,198
JBrowse link
G Irf4 interferon regulatory factor 4 enables ISO (MGI:5441724|PMID:22992524), (MGI:5444779|PMID:22992523), (MGI:5448096|PMID:22983707) RGD PMID:22983707 PMID:22992523 PMID:22992524 MGI:5441724 MGI:5444779 MGI:5448096 NCBI chr17:34,886,746...34,905,191
Ensembl chr17:34,886,739...34,905,117
JBrowse link
G Irf5 interferon regulatory factor 5 enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr 4:56,804,477...56,816,271
Ensembl chr 4:56,805,132...56,820,543
JBrowse link
G Irf6 interferon regulatory factor 6 enables ISO (PMID:28473536) RGD PMID:28473536 NCBI chr13:111,870,121...111,889,328
Ensembl chr13:111,870,121...111,889,328
JBrowse link
G Irx1 iroquois homeobox 1 enables ISO (PMID:28473536) RGD PMID:28473536 NCBI chr 1:33,910,912...33,916,741
Ensembl chr 1:33,910,912...33,916,741
JBrowse link
G Irx2 iroquois homeobox 2 enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr 1:33,270,388...33,275,868
Ensembl chr 1:33,271,977...33,275,540
JBrowse link
G Isl1 ISL LIM homeobox 1 enables IDA
ISO
(MGI:5825419|PMID:24643061) RGD PMID:24643061, PMID:1691825, PMID:9514122, PMID:7759514 MGI:5825419, RGD:61640, RGD:2303514, RGD:2303513 NCBI chr 2:48,488,911...48,501,217
Ensembl chr 2:48,487,736...48,501,436
JBrowse link
G Isx intestine-specific homeobox enables ISO (MGI:5638293|PMID:25701869) RGD PMID:25701869 MGI:5638293 NCBI chr19:14,198,899...14,219,269
Ensembl chr19:14,198,899...14,218,531
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit IDA ATF consensus binding site RGD PMID:12753154, PMID:17428807, PMID:10830307, PMID:10837920 RGD:1599299, RGD:2290488, RGD:1626699, RGD:1626488 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277
JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit IDA RGD PMID:10837920, PMID:10830307 RGD:1626488, RGD:1626699 NCBI chr19:26,092,972...26,094,756
Ensembl chr19:26,092,974...26,094,756
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit IDA RGD PMID:15860571, PMID:10830307, PMID:10837920 RGD:1600916, RGD:1626699, RGD:1626488 NCBI chr16:20,485,028...20,486,707
Ensembl chr16:20,485,029...20,486,707
JBrowse link
G Kcnip3 potassium voltage-gated channel interacting protein 3 IDA RGD PMID:18191896 RGD:7207199 NCBI chr 3:120,023,062...120,087,650
Ensembl chr 3:120,023,917...120,087,136
JBrowse link
G Kdm6b lysine demethylase 6B enables ISO (MGI:3764743|PMID:17928865) RGD PMID:17928865 MGI:3764743 NCBI chr10:56,000,494...56,009,582
Ensembl chr10:56,001,799...56,008,885
JBrowse link
G Klf14 Kruppel-like factor 14 enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr 4:58,247,876...58,250,798
Ensembl chr 4:58,247,876...58,250,798
JBrowse link
G Klf4 Kruppel like factor 4 enables IDA
ISO
(MGI:5490442|PMID:22306741), (MGI:84582|PMID:8940147) RGD PMID:8940147 PMID:22306741, PMID:12034813, PMID:17659301, PMID:15632413 MGI:5490442 MGI:84582, RGD:619591, RGD:1643591, RGD:1643534 NCBI chr 5:72,283,311...72,287,669
Ensembl chr 5:72,283,313...72,287,669
JBrowse link
G Klf5 Kruppel-like factor 5 IDA RGD PMID:21383775 RGD:9590238 NCBI chr15:83,703,796...83,722,921
Ensembl chr15:83,703,791...83,722,921
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 enables ISO (PMID:10825188)
(MGI:5523775|PMID:22235033), (MGI:5545970|PMID:21750544)
RGD PMID:10825188 PMID:21750544 PMID:22235033 MGI:5523775 MGI:5545970 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Lhx2 LIM homeobox 2 enables ISO (MGI:3044864|PMID:15173589) RGD PMID:15173589 MGI:3044864 NCBI chr 3:22,628,674...22,658,447
Ensembl chr 3:22,640,545...22,658,446
JBrowse link
G Lhx3 LIM homeobox 3 enables ISO (PMID:15271874) RGD PMID:15271874 NCBI chr 3:3,653,861...3,662,509
Ensembl chr 3:3,654,755...3,661,810
JBrowse link
G Lhx4 LIM homeobox 4 enables ISO (PMID:28473536) RGD PMID:28473536 NCBI chr13:73,348,874...73,400,416
Ensembl chr13:73,348,842...73,400,416
JBrowse link
G LOC100361016 oocyte specific homeobox 5-like enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr  X:93,064,417...93,067,181
Ensembl chr  X:93,064,686...93,065,675
JBrowse link
G LOC100910896 ETS-related transcription factor Elf-5-like enables IEA GO_REF:0000002 InterPro GO_REF:0000002
G LOC499235 LRRGT00141 enables ISS PMID:12169688 HGNC-UCL PMID:12169688 RGD:632168 NCBI chr 1:171,996,406...171,997,611
Ensembl chr 1:171,993,857...171,997,902
JBrowse link
G LOC691272 similar to reproductive homeobox on X chromosome, 11 enables ISO (PMID:11751690) RGD PMID:11751690 NCBI chr  X:124,045,727...124,052,708
Ensembl chr  X:124,045,737...124,052,632
JBrowse link
G Lonp1 lon peptidase 1, mitochondrial enables ISO (PMID:14739292) RGD PMID:14739292 NCBI chr 9:10,428,853...10,441,180
Ensembl chr 9:10,428,853...10,441,177
JBrowse link
G Mael maelstrom spermatogenic transposon silencer enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:84,412,569...84,452,140
Ensembl chr13:84,383,670...84,452,181
JBrowse link
G Maf MAF bZIP transcription factor enables ISO (MGI:1350584|PMID:10603348) RGD PMID:10603348 MGI:1350584 NCBI chr19:48,179,826...48,200,995
Ensembl chr19:48,194,804...48,196,748
JBrowse link
G Mafb MAF bZIP transcription factor B enables ISO (MGI:6393337|PMID:11823429) RGD PMID:11823429 MGI:6393337 NCBI chr 3:156,338,993...156,340,913
Ensembl chr 3:156,339,004...156,340,913
JBrowse link
G Maff MAF bZIP transcription factor F enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr 7:120,580,743...120,592,095
Ensembl chr 7:120,580,743...120,592,095
JBrowse link
G Mafk MAF bZIP transcription factor K enables ISO (PMID:23332764)
(MGI:894855|PMID:9240432)
RGD PMID:9240432 PMID:23332764 MGI:894855 NCBI chr12:16,923,989...16,934,706
Ensembl chr12:16,923,990...16,934,706
JBrowse link
G Max MYC associated factor X IDA RGD PMID:17341548 RGD:2290581 NCBI chr 6:99,984,260...100,011,460
Ensembl chr 6:99,984,260...100,011,388
JBrowse link
G Mef2a myocyte enhancer factor 2a enables ISO
IDA
(PMID:10835359)
(MGI:52878|PMID:8096811)
PMID:10521511
RGD PMID:8096811 PMID:10835359, PMID:10521511 MGI:52878, RGD:8553671 NCBI chr 1:128,207,715...128,341,681
Ensembl chr 1:128,209,971...128,341,263
JBrowse link
G Mef2c myocyte enhancer factor 2C enables ISO (MGI:3701381|PMID:17336904), (MGI:5013486|PMID:21556048), (MGI:5049797|PMID:21610032) RGD PMID:17336904 PMID:21556048 PMID:21610032 MGI:3701381 MGI:5013486 MGI:5049797 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Meis1 Meis homeobox 1 enables ISO MGI:97495 (MGI:3525808|PMID:15634706), (MGI:3703117|PMID:17049510) RGD PMID:15634706 PMID:17049510 MGI:3525808 MGI:3703117 NCBI chr14:103,182,178...103,321,809
Ensembl chr14:103,181,281...103,321,270
JBrowse link
G Meis2 Meis homeobox 2 enables ISO MGI:97495 (MGI:3703117|PMID:17049510), (MGI:3817812|PMID:18787068)
(PMID:17178831)
RGD PMID:17049510 PMID:17178831 PMID:18787068 MGI:3703117 MGI:3817812 NCBI chr 3:107,560,172...107,762,732
Ensembl chr 3:107,559,997...107,760,589
JBrowse link
G Meis3 Meis homeobox 3 enables ISO (PMID:17178831) RGD PMID:17178831 NCBI chr 1:78,065,617...78,079,698
Ensembl chr 1:78,068,931...78,079,862
JBrowse link
G Men1 menin 1 enables ISO (MGI:4838928|PMID:20956546) RGD PMID:20956546 MGI:4838928 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
G Meox1 mesenchyme homeobox 1 enables ISO (MGI:5586793|PMID:22206000) RGD PMID:22206000 MGI:5586793 NCBI chr10:89,797,011...89,817,009
Ensembl chr10:89,797,038...89,816,491
JBrowse link
G Meox2 mesenchyme homeobox 2 enables ISO (PMID:22206000), (PMID:9073066) RGD PMID:9073066 PMID:22206000 NCBI chr 6:56,625,768...56,689,195
Ensembl chr 6:56,625,650...56,689,238
JBrowse link
G Mlxipl MLX interacting protein-like IDA RGD PMID:11724780 RGD:634534 NCBI chr12:24,590,645...24,619,639 JBrowse link
G Mmp12 matrix metallopeptidase 12 enables ISO (PMID:24784232) RGD PMID:24784232 NCBI chr 8:5,594,717...5,616,494
Ensembl chr 8:5,606,592...5,616,493
JBrowse link
G Msx1 msh homeobox 1 enables ISO (MGI:83223|PMID:8858134) RGD PMID:8858134 MGI:83223 NCBI chr14:77,712,262...77,716,061
Ensembl chr14:77,712,240...77,716,059
JBrowse link
G Msx2 msh homeobox 2 enables ISO (PMID:9073066) RGD PMID:9073066 NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527
JBrowse link
G Mta1 metastasis associated 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:137,911,302...137,950,066
Ensembl chr 6:137,924,293...137,950,075
JBrowse link
G Mta2 metastasis associated 1 family, member 2 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:225,140,863...225,149,584
Ensembl chr 1:225,140,863...225,149,583
JBrowse link
G Mta3 metastasis associated 1 family, member 3 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:6,904,449...7,036,929
Ensembl chr 6:6,908,684...7,031,828
JBrowse link
G Mtpn myotrophin IDA RGD PMID:12031792 RGD:1581046 NCBI chr 4:63,012,009...63,039,422
Ensembl chr 4:63,012,011...63,039,422
JBrowse link
G Mybbp1a MYB binding protein 1a enables IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:2261643, PMID:21873635 RGD:61666, RGD:13792537 NCBI chr10:59,000,400...59,010,794
Ensembl chr10:59,000,397...59,010,903
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IDA RGD PMID:15139290, PMID:17341548 RGD:1601462, RGD:2290581 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Myf5 myogenic factor 5 enables ISO (MGI:5499082|PMID:22638570) RGD PMID:22638570 MGI:5499082 NCBI chr 7:49,729,533...49,732,974
Ensembl chr 7:49,729,533...49,732,764
JBrowse link
G Myod1 myogenic differentiation 1 enables ISO (MGI:5499082|PMID:22638570), (MGI:5614883|PMID:25640239) RGD PMID:22638570 PMID:25640239 MGI:5499082 MGI:5614883 NCBI chr 1:102,396,538...102,399,248
Ensembl chr 1:102,396,538...102,399,248
JBrowse link
G Myog myogenin enables ISO (PMID:11076940)
(MGI:5499082|PMID:22638570)
RGD PMID:11076940 PMID:22638570 MGI:5499082 NCBI chr13:51,126,459...51,129,048
Ensembl chr13:51,126,459...51,129,048
JBrowse link
G Myrf myelin regulatory factor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:226,260,558...226,292,650
Ensembl chr 1:226,260,558...226,292,480
JBrowse link
G Myrfl myelin regulatory factor-like enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:59,799,181...59,916,758
Ensembl chr 7:59,799,419...59,882,077
JBrowse link
G Nanog Nanog homeobox enables ISO (MGI:3795829|PMID:18400104), (MGI:4889168|PMID:20937355) RGD PMID:18400104 PMID:20937355 MGI:3795829 MGI:4889168 NCBI chr 4:155,531,906...155,539,268
Ensembl chr 4:155,531,906...155,539,268
JBrowse link
G Ncl nucleolin IDA RGD PMID:6311246 RGD:9693696 NCBI chr 9:93,369,119...93,377,643
Ensembl chr 9:93,368,932...93,377,643
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 enables ISO (MGI:3764743|PMID:17928865) RGD PMID:17928865 MGI:3764743 NCBI chr10:48,629,121...48,772,890
Ensembl chr10:48,629,121...48,772,890
JBrowse link
G Ncor2 nuclear receptor co-repressor 2 enables ISO (MGI:3764743|PMID:17928865) RGD PMID:17928865 MGI:3764743 NCBI chr12:36,871,917...37,033,701
Ensembl chr12:36,871,999...37,033,701
JBrowse link
G Neurod1 neuronal differentiation 1 contributes_to
enables
ISO (PMID:10545951)
(MGI:3614320|PMID:15793245), (MGI:3797314|PMID:18388149)
RGD PMID:10545951 PMID:15793245 PMID:18388149 MGI:3614320 MGI:3797314 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741
JBrowse link
G Neurog2 neurogenin 2 enables ISO (MGI:3703099|PMID:17141158) RGD PMID:17141158 MGI:3703099 NCBI chr 2:231,962,517...231,963,441
Ensembl chr 2:231,962,517...231,963,308
JBrowse link
G Nfatc1 nuclear factor of activated T-cells 1 enables ISO (MGI:3027699|PMID:15058383), (MGI:75926|PMID:7650004) RGD PMID:7650004 PMID:15058383 MGI:3027699 MGI:75926 NCBI chr18:77,203,517...77,322,690
Ensembl chr18:77,203,525...77,322,690
JBrowse link
G Nfatc2 nuclear factor of activated T-cells 2 enables ISO (MGI:75926|PMID:7650004), (MGI:84582|PMID:8940147) RGD PMID:7650004 PMID:8940147 MGI:75926 MGI:84582 NCBI chr 3:165,241,750...165,374,644
Ensembl chr 3:165,245,238...165,360,292
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 enables ISO (MGI:75926|PMID:7650004) RGD PMID:7650004 MGI:75926 NCBI chr19:38,039,542...38,114,003
Ensembl chr19:38,039,564...38,114,003
JBrowse link
G Nfe2l2 nuclear factor, erythroid 2-like 2 enables IDA
ISO
(MGI:894855|PMID:9240432)
(PMID:20452972)
RGD PMID:9240432 PMID:20452972, PMID:19735445 MGI:894855, RGD:6893328 NCBI chr 3:62,497,568...62,525,146
Ensembl chr 3:62,497,571...62,524,996
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 enables IDA
ISO
(MGI:3844151|PMID:19404405) RGD PMID:19404405, PMID:16135962 MGI:3844151, RGD:1598788 NCBI chr 2:240,773,520...240,890,053
Ensembl chr 2:240,773,456...240,866,689
JBrowse link
G Nfya nuclear transcription factor Y subunit alpha enables ISO MGI:97317 (MGI:59209|PMID:1698608) RGD PMID:1698608 MGI:59209 NCBI chr 9:14,551,752...14,577,002
Ensembl chr 9:14,551,758...14,576,967
JBrowse link
G Nfyb nuclear transcription factor Y subunit beta enables IEA
ISO
GO_REF:0000002
MGI:97316 (MGI:59209|PMID:1698608)
InterPro
RGD
PMID:1698608 GO_REF:0000002 MGI:59209 NCBI chr 7:27,081,667...27,097,481
Ensembl chr 7:27,081,667...27,097,479
JBrowse link
G Nkx2-1 NK2 homeobox 1 enables IDA
ISO
(MGI:2180986|PMID:11914369), (MGI:74773|PMID:7896788) RGD PMID:7896788 PMID:11914369, PMID:17729273 MGI:2180986 MGI:74773, RGD:2306235 NCBI chr 6:77,418,096...77,423,383
Ensembl chr 6:77,418,096...77,421,286
JBrowse link
G Nkx2-2 NK2 homeobox 2 enables ISO (MGI:3037232|PMID:14701942) RGD PMID:14701942 MGI:3037232 NCBI chr 3:141,408,460...141,419,083
Ensembl chr 3:141,408,798...141,411,170
JBrowse link
G Nkx2-5 NK2 homeobox 5 enables IDA
ISO
(PMID:10948187) RGD PMID:10948187, PMID:11042197 RGD:2306248 NCBI chr10:16,635,989...16,638,758
Ensembl chr10:16,635,989...16,638,764
JBrowse link
G Nkx2-8 NK2 homeobox 8 enables IDA
ISO
(PMID:12167706) RGD PMID:12167706, PMID:12167706 RGD:1302328 NCBI chr 6:77,506,882...77,508,585
Ensembl chr 6:77,506,882...77,508,585
JBrowse link
G Nkx3-1 NK3 homeobox 1 enables ISO (PMID:19780584)
(MGI:87385|PMID:9142502)
RGD PMID:9142502 PMID:19780584 MGI:87385 NCBI chr15:51,065,316...51,067,908
Ensembl chr15:51,065,316...51,068,421
JBrowse link
G Nkx6-1 NK6 homeobox 1 IDA RGD PMID:15883383 RGD:2306242 NCBI chr14:9,555,264...9,562,197
Ensembl chr14:9,555,264...9,562,189
JBrowse link
G Nkx6-2 NK6 homeobox 2 enables ISO (MGI:52878|PMID:8096811) RGD PMID:8096811 MGI:52878 NCBI chr 1:211,922,389...211,923,929
Ensembl chr 1:211,922,389...211,923,929
JBrowse link
G Nkx6-3 NK6 homeobox 3 enables ISO (PMID:28473536) RGD PMID:28473536 NCBI chr16:73,665,269...73,670,482
Ensembl chr16:73,665,269...73,670,482
JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 enables ISO (MGI:5689221|PMID:26098997) RGD PMID:26098997 MGI:5689221 NCBI chr10:45,884,324...45,918,290
Ensembl chr10:45,893,018...45,918,254
JBrowse link
G Nobox NOBOX oogenesis homeobox enables ISO (PMID:27798098)
(MGI:4822514|PMID:20659469)
RGD PMID:20659469 PMID:27798098 MGI:4822514 NCBI chr 4:72,749,239...72,757,066
Ensembl chr 4:72,751,382...72,756,887
JBrowse link
G Nr0b1 nuclear receptor subfamily 0, group B, member 1 NOT|enables IMP
ISO
(MGI:5824766|PMID:27601327) RGD PMID:27601327, PMID:12697699 MGI:5824766, RGD:1624302 NCBI chr  X:54,734,385...54,738,513
Ensembl chr  X:54,734,385...54,738,513
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:86,683,875...86,690,815
Ensembl chr10:86,683,875...86,690,815
JBrowse link
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:8,730,871...8,757,165
Ensembl chr15:8,730,871...8,757,165
JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 contributes_to IDA RGD PMID:7892230 RGD:729016 NCBI chr 1:100,554,577...100,559,896
Ensembl chr 1:100,554,544...100,559,942
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 IDA RGD PMID:7935418 RGD:61675 NCBI chr 3:80,004,130...80,014,197
Ensembl chr 3:80,004,130...80,012,750
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 enables ISO (PMID:12815072) RGD PMID:12815072 NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056
JBrowse link
G Nr1i3 nuclear receptor subfamily 1, group I, member 3 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:89,585,072...89,591,278
Ensembl chr13:89,586,283...89,591,277
JBrowse link
G Nr2c2 nuclear receptor subfamily 2, group C, member 2 enables ISO (PMID:10644740) RGD PMID:10644740 NCBI chr 4:124,005,287...124,030,349
Ensembl chr 4:124,005,280...124,030,349
JBrowse link
G Nr2e3 nuclear receptor subfamily 2, group E, member 3 enables ISO (PMID:10220376) RGD PMID:10220376 NCBI chr 8:64,797,518...64,801,587
Ensembl chr 8:64,797,518...64,800,467
JBrowse link
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 enables ISO (PMID:10644740)
(MGI:5574156|PMID:24349493), (MGI:70257|PMID:7823919)
RGD PMID:7823919 PMID:10644740 PMID:24349493 MGI:5574156 MGI:70257 NCBI chr 2:5,569,954...5,579,894
Ensembl chr 2:5,569,935...5,579,894
JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 enables IDA
ISO
(MGI:70257|PMID:7823919)
(PMID:9343308)
RGD PMID:7823919 PMID:9343308, PMID:12777384 MGI:70257, RGD:737636 NCBI chr 1:131,447,671...131,465,749
Ensembl chr 1:131,448,447...131,460,473
JBrowse link
G Nr2f6 nuclear receptor subfamily 2, group F, member 6 enables ISO
IDA
(PMID:10644740)
PMID:9343308
RGD PMID:10644740, PMID:9343308 RGD:8553874 NCBI chr16:19,769,968...19,777,414
Ensembl chr16:19,769,968...19,777,414
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 enables IDA
ISO
(MGI:70442|PMID:7883868) RGD PMID:7883868, PMID:8618925, PMID:9001244 MGI:70442, RGD:1601060, RGD:634124 NCBI chr18:31,728,373...32,704,022
Ensembl chr18:31,728,373...31,749,647
JBrowse link
G Nr3c2 nuclear receptor subfamily 3, group C, member 2 IDA RGD PMID:8690788, PMID:8618925 RGD:1601056, RGD:1601060 NCBI chr19:34,408,275...34,761,003
Ensembl chr19:34,448,289...34,752,695
JBrowse link
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 enables ISO (MGI:3797314|PMID:18388149), (MGI:84485|PMID:8961274) RGD PMID:8961274 PMID:18388149 MGI:3797314 MGI:84485 NCBI chr 7:142,899,358...142,920,216
Ensembl chr 7:142,905,758...142,920,216
JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 enables IEA
ISO
GO_REF:0000002
(MGI:84485|PMID:8961274)
InterPro
RGD
PMID:8961274 GO_REF:0000002 MGI:84485 NCBI chr 3:43,111,258...43,128,391
Ensembl chr 3:43,111,240...43,119,159
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 enables ISO (MGI:84485|PMID:8961274) RGD PMID:8961274 MGI:84485 NCBI chr 5:63,781,801...63,822,890
Ensembl chr 5:63,781,801...63,821,637
JBrowse link
G Nr5a1 nuclear receptor subfamily 5, group A, member 1 enables IDA
ISO
(PMID:27378692) RGD PMID:27378692, PMID:12697699 RGD:1624302 NCBI chr 3:22,998,900...23,020,441
Ensembl chr 3:22,999,616...23,020,441
JBrowse link
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 enables ISO (PMID:16289203) RGD PMID:16289203 NCBI chr13:53,750,470...53,870,288
Ensembl chr13:53,750,473...53,870,428
JBrowse link
G Nr6a1 nuclear receptor subfamily 6, group A, member 1 enables ISO (MGI:3715068|PMID:9025060), (MGI:69378|PMID:7854358) RGD PMID:7854358 PMID:9025060 MGI:3715068 MGI:69378 NCBI chr 3:23,029,222...23,218,050
Ensembl chr 3:23,033,775...23,066,658
JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 enables ISO (MGI:5462481|PMID:23241889) RGD PMID:23241889 MGI:5462481 NCBI chr14:82,119,210...82,196,501
Ensembl chr14:82,119,210...82,171,480
JBrowse link
G Osr2 odd-skipped related transciption factor 2 enables ISS
ISO
GO_REF:0000024
(MGI:3818159|PMID:17547533)
UniProt
RGD
PMID:17547533 GO_REF:0000024 MGI:3818159 NCBI chr 7:74,047,820...74,055,096
Ensembl chr 7:74,047,814...74,055,256
JBrowse link
G Pax3 paired box 3 enables ISO (MGI:2176007|PMID:11863357)
(PMID:11863357)
RGD PMID:11863357 MGI:2176007 NCBI chr 9:84,004,004...84,101,226
Ensembl chr 9:84,005,183...84,101,172
JBrowse link
G Pax6 paired box 6 enables IDA
ISO
(MGI:4867351|PMID:21084637)
(MGI:5494876|PMID:23622063)
RGD PMID:21084637 PMID:23622063, PMID:12370174 MGI:4867351 MGI:5494876, RGD:632189 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
JBrowse link
G Pax7 paired box 7 enables ISO (MGI:5440096|PMID:23070814) RGD PMID:23070814 MGI:5440096 NCBI chr 5:158,211,001...158,313,510
Ensembl chr 5:158,214,616...158,313,426
JBrowse link
G Pax8 paired box 8 IDA RGD PMID:11145590 RGD:628521 NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
JBrowse link
G Pbx1 PBX homeobox 1 enables ISO MGI:104717|MGI:108564|MGI:1201409|MGI:2445415|MGI:96182 (MGI:3525808|PMID:15634706), (MGI:3653971|PMID:16847320), (MGI:3703117|PMID:17049510), (MGI:3817812|PMID:18787068) RGD PMID:15634706 PMID:16847320 PMID:17049510 PMID:18787068 MGI:3525808 MGI:3653971 MGI:3703117 MGI:3817812 NCBI chr13:86,390,741...86,671,460
Ensembl chr13:86,390,741...86,451,002
JBrowse link
G Pbx3 PBX homeobox 3 enables ISO (MGI:3653971|PMID:16847320) RGD PMID:16847320 MGI:3653971 NCBI chr 3:13,241,031...13,436,084
Ensembl chr 3:13,182,024...13,525,983
JBrowse link
G Pbx4 PBX homeobox 4 enables ISO (MGI:3777519|PMID:17875925) RGD PMID:17875925 MGI:3777519 NCBI chr16:21,303,117...21,338,771
Ensembl chr16:21,303,837...21,338,771
JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 enables IDA
ISO
(MGI:3037232|PMID:14701942) RGD PMID:14701942, PMID:10094480 MGI:3037232, RGD:1598709 NCBI chr12:9,496,044...9,501,211
Ensembl chr12:9,496,044...9,501,213
JBrowse link
G Pgr progesterone receptor IDA RGD PMID:17109827 RGD:7248706 NCBI chr 8:7,128,656...7,187,796
Ensembl chr 8:7,128,656...7,187,796
JBrowse link
G Pitx2 paired-like homeodomain 2 enables ISO (MGI:4848250|PMID:20816801) RGD PMID:20816801 MGI:4848250 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
G Pknox1 PBX/knotted 1 homeobox 1 enables ISO (MGI:3777519|PMID:17875925) RGD PMID:17875925 MGI:3777519 NCBI chr20:10,331,608...10,358,922
Ensembl chr20:10,334,308...10,358,922
JBrowse link
G Pknox2 PBX/knotted 1 homeobox 2 enables ISO MGI:97495 (MGI:3653971|PMID:16847320), (MGI:3703117|PMID:17049510) RGD PMID:16847320 PMID:17049510 MGI:3653971 MGI:3703117 NCBI chr 8:39,361,698...39,551,700
Ensembl chr 8:39,361,218...39,551,700
JBrowse link
G Plagl2 PLAG1 like zinc finger 2 enables ISO (PMID:15361364) RGD PMID:15361364 NCBI chr 3:148,709,564...148,722,777
Ensembl chr 3:148,709,531...148,722,742
JBrowse link
G Polrmt RNA polymerase mitochondrial enables ISO (PMID:29445193)
(MGI:6120139|PMID:23283301)
RGD PMID:23283301 PMID:29445193 MGI:6120139 NCBI chr 7:12,840,907...12,851,153
Ensembl chr 7:12,840,938...12,851,153
JBrowse link
G Pou1f1 POU class 1 homeobox 1 enables ISO (MGI:4831168|PMID:7902581) RGD PMID:7902581 MGI:4831168 NCBI chr11:2,645,659...2,662,581
Ensembl chr11:2,645,865...2,662,579
JBrowse link
G Pou2f1 POU class 2 homeobox 1 enables ISO (MGI:3701404|PMID:17140559), (MGI:3776892|PMID:7969117), (MGI:65301|PMID:8131747), (MGI:74622|PMID:1690859), (MGI:84539|PMID:8960364)
(PMID:11997177), (PMID:7945330), (PMID:9242494)
RGD PMID:1690859 PMID:7945330 PMID:7969117 PMID:8131747 PMID:8960364 PMID:9242494 PMID:11997177 PMID:17140559 MGI:3701404 MGI:3776892 MGI:65301 MGI:74622 MGI:84539 NCBI chr13:84,075,316...84,217,368
Ensembl chr13:84,083,632...84,217,366
JBrowse link
G Pou2f2 POU class 2 homeobox 2 enables IDA
ISO
(PMID:9242494)
(MGI:3703099|PMID:17141158), (MGI:4831168|PMID:7902581), (MGI:72108|PMID:7720710)
RGD PMID:7720710 PMID:7902581 PMID:9242494 PMID:17141158, PMID:9196379 MGI:3703099 MGI:4831168 MGI:72108, RGD:2290189 NCBI chr 1:81,966,791...82,049,116
Ensembl chr 1:81,964,104...82,004,538
JBrowse link
G Pou2f3 POU class 2 homeobox 3 enables ISO (MGI:66569|PMID:8224904)
(PMID:9242494)
RGD PMID:8224904 PMID:9242494 MGI:66569 NCBI chr 8:47,412,063...47,495,042
Ensembl chr 8:47,410,220...47,494,982
JBrowse link
G Pou3f1 POU class 3 homeobox 1 enables IDA
ISO
(PMID:9242494) RGD PMID:9242494, PMID:9196379 RGD:2290189 NCBI chr 5:142,643,599...142,646,580
Ensembl chr 5:142,643,599...142,646,580
JBrowse link
G Pou3f2 POU class 3 homeobox 2 enables IDA
ISO
(MGI:3703099|PMID:17141158) RGD PMID:17141158, PMID:9196379 MGI:3703099, RGD:2290189 NCBI chr 5:36,677,452...36,683,356
Ensembl chr 5:36,681,528...36,683,356
JBrowse link
G Pou3f3 POU class 3 homeobox 3 enables IEA
ISO
ISS
GO_REF:0000107
(MGI:4362014|PMID:11997177)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:11997177 GO_REF:0000024 GO_REF:0000107 MGI:4362014 NCBI chr 9:49,479,148...49,482,246
Ensembl chr 9:49,479,023...49,482,252
JBrowse link
G Pou3f4 POU class 3 homeobox 4 enables ISO (MGI:3703099|PMID:17141158) RGD PMID:17141158 MGI:3703099 NCBI chr  X:82,143,789...82,145,066
Ensembl chr  X:82,143,789...82,145,066
JBrowse link
G Pou4f1 POU class 4 homeobox 1 enables ISS
ISO
GO_REF:0000024
(MGI:5795831|PMID:8621561), (MGI:5825429|PMID:17668438), (MGI:5825441|PMID:7935408), (MGI:64462|PMID:8290353)
UniProt
RGD
PMID:7935408 PMID:8290353 PMID:8621561 PMID:17668438 GO_REF:0000024 MGI:5795831 MGI:5825429 MGI:5825441 MGI:64462 NCBI chr15:88,618,255...88,622,712
Ensembl chr15:88,620,470...88,622,413
JBrowse link
G Pou4f2 POU class 4 homeobox 2 enables ISS
ISO
GO_REF:0000024
(MGI:5804084|PMID:26670484), (MGI:5825419|PMID:24643061), (MGI:5825429|PMID:17668438), (MGI:5825441|PMID:7935408), (MGI:64462|PMID:8290353), (MGI:893247|PMID:7904822)
UniProt
RGD
PMID:7904822 PMID:7935408 PMID:8290353 PMID:17668438 PMID:24643061 PMID:26670484 GO_REF:0000024 MGI:5804084 MGI:5825419 MGI:5825429 MGI:5825441 MGI:64462 MGI:893247 NCBI chr19:33,160,180...33,163,821
Ensembl chr19:33,160,180...33,163,821
JBrowse link
G Pou4f3 POU class 4 homeobox 3 enables ISS
ISO
GO_REF:0000024
(MGI:5825441|PMID:7935408), (MGI:64462|PMID:8290353)
UniProt
RGD
PMID:7935408 PMID:8290353 GO_REF:0000024 MGI:5825441 MGI:64462 NCBI chr18:36,713,869...36,716,461
Ensembl chr18:36,713,869...36,716,461
JBrowse link
G Pou5f1 POU class 5 homeobox 1 enables IDA
ISO
(PMID:20713518)
(MGI:1270966|PMID:9649510), (MGI:3621412|PMID:16518401), (MGI:3759699|PMID:17938240), (MGI:3776892|PMID:7969117), (MGI:3795829|PMID:18400104), (MGI:4367296|PMID:19796622), (MGI:5529430|PMID:23508100), (MGI:68656|PMID:7945330), (MGI:74622|PMID:1690859), (MGI:84539|PMID:8960364)
RGD PMID:1690859 PMID:7945330 PMID:7969117 PMID:8960364 PMID:9649510 PMID:16518401 PMID:17938240 PMID:18400104 PMID:19796622 PMID:20713518 PMID:23508100, PMID:9196379 MGI:1270966 MGI:3621412 MGI:3759699 MGI:3776892 MGI:3795829 MGI:4367296 MGI:5529430 MGI:68656 MGI:74622 MGI:84539, RGD:2290189 NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994
JBrowse link
G Pou5f2 POU domain class 5, transcription factor 2 enables ISO (MGI:4831168|PMID:7902581) RGD PMID:7902581 MGI:4831168 NCBI chr 2:5,437,067...5,438,301
Ensembl chr 2:5,437,067...5,438,301
JBrowse link
G Pou6f1 POU class 6 homeobox 1 enables ISO (PMID:8645295)
(MGI:52889|PMID:8463278)
RGD PMID:8463278 PMID:8645295 MGI:52889 NCBI chr 7:142,201,614...142,225,256
Ensembl chr 7:142,204,036...142,210,738
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha enables IDA
ISO
(MGI:3689805|PMID:16271724) RGD PMID:16271724, PMID:16280383 MGI:3689805, RGD:11035228 NCBI chr 7:126,618,872...126,687,282
Ensembl chr 7:126,619,196...126,681,752
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma enables ISO (PMID:9568716) RGD PMID:9568716 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha enables ISO
ISS
(PMID:23836911)
GO_REF:0000024
RGD
UniProt
PMID:23836911 GO_REF:0000024 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009
JBrowse link
G Prdm1 PR/SET domain 1 enables ISO (MGI:3826899|PMID:18845144) RGD PMID:18845144 MGI:3826899 NCBI chr20:49,464,921...49,556,623
Ensembl chr20:49,464,919...49,556,518
JBrowse link
G Prdm16 PR/SET domain 16 enables ISO (PMID:12816872)
(MGI:3770355|PMID:17618855)
RGD PMID:12816872 PMID:17618855 MGI:3770355 NCBI chr 5:171,662,277...171,711,561
Ensembl chr 5:171,662,277...171,710,316
JBrowse link
G Prdm2 PR/SET domain 2 enables ISO (PMID:9334209) RGD PMID:9334209 NCBI chr 5:161,769,587...161,879,150
Ensembl chr 5:161,770,653...161,879,133
JBrowse link
G Prdm5 PR/SET domain 5 enables ISO (PMID:17636019) RGD PMID:17636019 NCBI chr 4:96,659,062...96,810,816
Ensembl chr 4:96,659,084...96,812,263
JBrowse link
G Prdm9 PR/SET domain 9 enables ISS
ISO
GO_REF:0000024
(MGI:5306625|PMID:22028627)
(PMID:29072575)
UniProt
RGD
PMID:22028627 PMID:29072575 GO_REF:0000024 MGI:5306625 NCBI chr 1:57,533,602...57,555,155
Ensembl chr 1:57,533,577...57,555,048
JBrowse link
G Prox1 prospero homeobox 1 enables ISO (MGI:4946187|PMID:21040746) RGD PMID:21040746 MGI:4946187 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 IDA RGD PMID:1561080 RGD:10045981 NCBI chr 7:12,663,965...12,673,723
Ensembl chr 7:12,663,965...12,673,718
JBrowse link
G Ptf1a pancreas associated transcription factor 1a enables ISO (MGI:3759692|PMID:17938243) RGD PMID:17938243 MGI:3759692 NCBI chr17:86,199,623...86,201,477
Ensembl chr17:86,199,623...86,201,477
JBrowse link
G Rag1 recombination activating 1 enables IBA
ISO
PMID:21873635
(MGI:4441118|PMID:19396172), (MGI:4441148|PMID:10601033)
RGD PMID:10601033 PMID:19396172, PMID:21873635 MGI:4441118 MGI:4441148, RGD:13792537 NCBI chr 3:91,206,394...91,217,491
Ensembl chr 3:91,206,394...91,217,491
JBrowse link
G Rag2 recombination activating 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:91,191,837...91,200,134
Ensembl chr 3:91,191,837...91,200,134
JBrowse link
G Rara retinoic acid receptor, alpha enables ISO MGI:98214|MGI:98215|MGI:98216 (MGI:3764743|PMID:17928865), (MGI:70257|PMID:7823919) RGD PMID:7823919 PMID:17928865 MGI:3764743 MGI:70257 NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210
JBrowse link
G Rarb retinoic acid receptor, beta enables ISO MGI:98214|MGI:98215|MGI:98216 (MGI:70257|PMID:7823919) RGD PMID:7823919 MGI:70257 NCBI chr15:9,915,223...10,262,599
Ensembl chr15:10,120,206...10,262,599
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region enables ISO (PMID:23303788)
(MGI:3718933|PMID:17658278), (MGI:3759692|PMID:17938243), (MGI:3801241|PMID:18381292)
RGD PMID:17658278 PMID:17938243 PMID:18381292 PMID:23303788 MGI:3718933 MGI:3759692 MGI:3801241 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
G Rel REL proto-oncogene, NF-kB subunit IDA RGD PMID:15496515, PMID:15312903 RGD:2300280, RGD:2300285 NCBI chr14:108,490,794...108,517,582
Ensembl chr14:108,491,069...108,509,892
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit enables IDA
ISO
(MGI:5484830|PMID:23184950) RGD PMID:23184950, PMID:9918814, PMID:10620707 MGI:5484830, RGD:2298880, RGD:2298882 NCBI chr 1:220,992,770...221,003,249
Ensembl chr 1:220,992,770...221,003,249
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:167,330,966...167,664,506
Ensembl chr 5:167,331,035...167,664,505
JBrowse link
G Rest RE1-silencing transcription factor enables IDA
ISO
ISS
PMID:10490617
(MGI:6294387|PMID:11039732), (MGI:6294407|PMID:10490617)
GO_REF:0000024
RGD
UniProt
PMID:10490617 PMID:11039732, PMID:10490617 GO_REF:0000024 MGI:6294387 MGI:6294407, RGD:14397572 NCBI chr14:33,131,985...33,152,019
Ensembl chr14:33,134,511...33,164,141
JBrowse link
G Rfc1 replication factor C subunit 1 IDA RGD PMID:9826522 RGD:2307113 NCBI chr14:44,627,528...44,702,205
Ensembl chr14:44,580,216...44,702,203
JBrowse link
G Rfx3 regulatory factor X3 enables ISO (MGI:5566553|PMID:24531968) RGD PMID:24531968 MGI:5566553 NCBI chr 1:245,853,332...246,110,648
Ensembl chr 1:245,859,633...246,110,218
JBrowse link
G Rfx5 regulatory factor X5 enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr 2:196,119,054...196,128,109
Ensembl chr 2:196,120,580...196,128,095
JBrowse link
G Rora RAR-related orphan receptor A enables ISO (PMID:11053433)
(MGI:5553243|PMID:18055760)
RGD PMID:11053433 PMID:18055760 MGI:5553243 NCBI chr 8:75,515,886...75,616,477
Ensembl chr 8:75,516,904...75,607,212
JBrowse link
G Rorb RAR-related orphan receptor B enables IEA
ISO
GO_REF:0000002
(MGI:3652638|PMID:16574740)
InterPro
RGD
PMID:16574740 GO_REF:0000002 MGI:3652638 NCBI chr 1:234,252,757...234,442,597
Ensembl chr 1:234,252,757...234,435,839
JBrowse link
G Rxra retinoid X receptor alpha enables ISO (PMID:11915042)
MGI:97856|MGI:97857 (MGI:70257|PMID:7823919)
RGD PMID:7823919 PMID:11915042 MGI:70257 NCBI chr 3:6,272,560...6,295,354
Ensembl chr 3:6,211,789...6,295,908
JBrowse link
G Rxrb retinoid X receptor beta enables ISO MGI:97856|MGI:97857 (MGI:70257|PMID:7823919) RGD PMID:7823919 MGI:70257 NCBI chr20:3,822,673...3,829,138
Ensembl chr20:3,823,042...3,829,140
JBrowse link
G Rxrg retinoid X receptor gamma enables ISO MGI:97856|MGI:97857 (MGI:70257|PMID:7823919) RGD PMID:7823919 MGI:70257 NCBI chr13:85,818,473...85,868,555
Ensembl chr13:85,818,427...85,868,552
JBrowse link
G Safb scaffold attachment factor B enables IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:9671816, PMID:21873635 RGD:634000, RGD:13792537 NCBI chr 9:10,450,216...10,471,174
Ensembl chr 9:10,450,205...10,471,176
JBrowse link
G Safb2 scaffold attachment factor B2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:10,471,618...10,492,775
Ensembl chr 9:10,471,742...10,490,416
JBrowse link
G Satb1 SATB homeobox 1 enables ISO (PMID:15851481) RGD PMID:15851481 NCBI chr 9:2,181,135...2,277,949
Ensembl chr 9:2,190,915...2,274,629
JBrowse link
G Satb2 SATB homeobox 2 enables ISO MGI:88096|MGI:99829 (MGI:3692344|PMID:16751105) RGD PMID:16751105 MGI:3692344 NCBI chr 9:63,456,877...63,642,193
Ensembl chr 9:63,456,783...63,641,400
JBrowse link
G Scrt1 scratch family transcriptional repressor 1 enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr 7:117,583,453...117,587,103
Ensembl chr 7:117,583,453...117,587,103
JBrowse link
G Scx scleraxis bHLH transcription factor enables ISO (MGI:5294319|PMID:9328840) RGD PMID:9328840 MGI:5294319 NCBI chr 7:117,519,075...117,521,093
Ensembl chr 7:117,519,075...117,521,093
JBrowse link
G Shox2 short stature homeobox 2 enables ISO (MGI:5902677|PMID:23332764) RGD PMID:23332764 MGI:5902677 NCBI chr 2:164,118,175...164,126,783
Ensembl chr 2:164,118,191...164,126,783
JBrowse link
G Sirt3 sirtuin 3 enables ISO (PMID:29445193)
(MGI:6120139|PMID:23283301)
RGD PMID:23283301 PMID:29445193 MGI:6120139 NCBI chr 1:213,613,502...213,636,061
Ensembl chr 1:213,613,513...213,635,546
JBrowse link
G Six1 SIX homeobox 1 enables ISO (PMID:15141091)
(MGI:1314920|PMID:9826681), (MGI:3703492|PMID:17098221)
RGD PMID:9826681 PMID:15141091 PMID:17098221 MGI:1314920 MGI:3703492 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six2 SIX homeobox 2 enables ISO (MGI:3510065|PMID:15327782), (MGI:82817|PMID:8814301) RGD PMID:8814301 PMID:15327782 MGI:3510065 MGI:82817 NCBI chr 6:8,952,572...8,955,893
Ensembl chr 6:8,952,572...8,956,276
JBrowse link
G Six3 SIX homeobox 3 enables ISO (MGI:82817|PMID:8814301) RGD PMID:8814301 MGI:82817 NCBI chr 6:8,886,730...8,891,094
Ensembl chr 6:8,886,591...8,889,925
JBrowse link
G Six4 SIX homeobox 4 enables ISO (MGI:1314920|PMID:9826681), (MGI:82817|PMID:8814301) RGD PMID:8814301 PMID:9826681 MGI:1314920 MGI:82817 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
G Six5 SIX homeobox 5 enables ISO (MGI:82817|PMID:8814301) RGD PMID:8814301 MGI:82817 NCBI chr 1:80,000,106...80,005,303
Ensembl chr 1:80,000,165...80,003,232
JBrowse link
G Sltm SAFB-like, transcription modulator enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:76,977,698...77,022,847
Ensembl chr 8:76,977,822...77,022,837
JBrowse link
G Smad1 SMAD family member 1 enables ISO (MGI:5882869|PMID:23169531) RGD PMID:23169531 MGI:5882869 NCBI chr19:32,182,942...32,248,694
Ensembl chr19:32,188,267...32,248,684
JBrowse link
G Smad3 SMAD family member 3 enables IDA
ISO
(PMID:10823886)
PMID:22073128
Smad binding elements SBE1 and SBE2 in alpha-smooth muscle actin promoter
Smad binding element (SBE) in the rat Tert gene promoter
RGD PMID:10823886, PMID:16891311, PMID:22073128, PMID:12702545, PMID:16205635 RGD:1625706, RGD:8554355, RGD:1299323, RGD:2300406 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Smad4 SMAD family member 4 contributes_to ISO (PMID:10823886) RGD PMID:10823886 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
JBrowse link
G Snai1 snail family transcriptional repressor 1 enables ISO (MGI:1270969|PMID:9676199) RGD PMID:9676199 MGI:1270969 NCBI chr 3:164,274,710...164,279,199
Ensembl chr 3:164,274,710...164,279,378
JBrowse link
G Snai2 snail family transcriptional repressor 2 enables ISO (PMID:10518215), (PMID:10866665) RGD PMID:10518215 PMID:10866665 NCBI chr11:90,404,421...90,406,730
Ensembl chr11:90,403,333...90,406,797
JBrowse link
G Snapc1 small nuclear RNA activating complex, polypeptide 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:96,871,675...96,893,422
Ensembl chr 6:96,871,625...96,893,444
JBrowse link
G Sox1 SRY-box transcription factor 1 enables ISO (MGI:1201714|PMID:9512512) RGD PMID:9512512 MGI:1201714
G Sox13 SRY-box transcription factor 13 enables ISO (MGI:1195512|PMID:9421502), (MGI:1201315|PMID:9524265) RGD PMID:9421502 PMID:9524265 MGI:1195512 MGI:1201315 NCBI chr13:50,434,702...50,479,118
Ensembl chr13:50,434,702...50,479,657
JBrowse link
G Sox17 SRY-box transcription factor 17 enables ISO (MGI:81261|PMID:8636240) RGD PMID:8636240 MGI:81261 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
JBrowse link
G Sox18 SRY-box transcription factor 18 enables ISO (MGI:75639|PMID:7651823) RGD PMID:7651823 MGI:75639 NCBI chr 3:177,177,237...177,179,039
Ensembl chr 3:177,177,310...177,179,127
JBrowse link
G Sox2 SRY-box transcription factor 2 enables ISO (MGI:1270030|PMID:9669521), (MGI:1270966|PMID:9649510), (MGI:3795829|PMID:18400104), (MGI:5882869|PMID:23169531), (MGI:74891|PMID:7628452)
(PMID:20713518)
RGD PMID:7628452 PMID:9649510 PMID:9669521 PMID:18400104 PMID:20713518 PMID:23169531 MGI:1270030 MGI:1270966 MGI:3795829 MGI:5882869 MGI:74891 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Sox6 SRY-box transcription factor 6 enables ISO (MGI:3692153|PMID:16462943) RGD PMID:16462943 MGI:3692153 NCBI chr 1:185,631,702...186,186,192
Ensembl chr 1:185,673,177...186,182,829
JBrowse link
G Sox7 SRY-box transcription factor 7 enables ISO (MGI:1337189|PMID:10320775) RGD PMID:10320775 MGI:1337189 NCBI chr15:47,293,699...47,300,460
Ensembl chr15:47,293,699...47,300,460
JBrowse link
G Sox8 SRY-box transcription factor 8 enables ISO (MGI:1354210|PMID:10684944) RGD PMID:10684944 MGI:1354210 NCBI chr10:14,932,348...14,937,336
Ensembl chr10:14,932,348...14,937,336
JBrowse link
G Sox9 SRY-box transcription factor 9 enables ISO (PMID:31194875)
(MGI:3578585|PMID:15800003), (MGI:6251086|PMID:25229425), (MGI:6414722|PMID:26146088)
RGD PMID:15800003 PMID:25229425 PMID:26146088 PMID:31194875 MGI:3578585 MGI:6251086 MGI:6414722 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Sp1 Sp1 transcription factor enables IDA
ISO
(MGI:1927252|PMID:11071760)
(PMID:12169688)
RGD PMID:11071760 PMID:12169688, PMID:12753154, PMID:10837920 MGI:1927252, RGD:1599299, RGD:1626488 NCBI chr 7:144,014,173...144,044,635
Ensembl chr 7:144,014,173...144,044,629
JBrowse link
G Sp4 Sp4 transcription factor enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr 6:146,135,877...146,201,344
Ensembl chr 6:146,135,877...146,195,819
JBrowse link
G Sp5 Sp5 transcription factor enables ISO (MGI:1927252|PMID:11071760) RGD PMID:11071760 MGI:1927252 NCBI chr 3:56,766,475...56,769,277
Ensembl chr 3:56,766,475...56,769,277
JBrowse link
G Spdef SAM pointed domain containing ets transcription factor enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr20:7,292,823...7,308,053
Ensembl chr20:7,292,824...7,307,284
JBrowse link
G Spi1 Spi-1 proto-oncogene enables IDA
ISO
(MGI:51207|PMID:1409581), (MGI:5538469|PMID:23775123) RGD PMID:1409581 PMID:23775123, PMID:10867017, PMID:15688197 MGI:51207 MGI:5538469, RGD:633204, RGD:9586722 NCBI chr 3:79,918,127...79,937,708
Ensembl chr 3:79,918,969...79,938,301
JBrowse link
G Spib Spi-B transcription factor enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:100,531,538...100,537,397
Ensembl chr 1:100,531,457...100,537,377
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 enables IDA
ISO
(MGI:2683822|PMID:14654692) RGD PMID:14654692, PMID:9786926 MGI:2683822, RGD:2308843 NCBI chr10:46,570,996...46,593,021
Ensembl chr10:46,570,996...46,593,009
JBrowse link
G Srf serum response factor enables IDA
ISO
(MGI:4461820|PMID:20534669) RGD PMID:20534669, PMID:16822834 MGI:4461820, RGD:1580749 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Sry sex determining region Y IMP RGD PMID:15464265 RGD:1598776 NCBI chr  Y:327,176...327,685
Ensembl chr  Y:327,166...329,299
JBrowse link
G Stat1 signal transducer and activator of transcription 1 IDA RGD PMID:16648019 RGD:2298581 NCBI chr 9:54,287,540...54,327,958
Ensembl chr 9:54,287,541...54,484,533
JBrowse link
G Stat3 signal transducer and activator of transcription 3 enables IDA
ISO
(MGI:3654744|PMID:16801560) RGD PMID:16801560, PMID:16648019 MGI:3654744, RGD:2298581 NCBI chr10:88,790,401...88,842,263
Ensembl chr10:88,790,408...88,842,233
JBrowse link
G Stat4 signal transducer and activator of transcription 4 enables IDA
ISO
(MGI:2176424|PMID:11894097) RGD PMID:11894097, PMID:16648019 MGI:2176424, RGD:2298581 NCBI chr 9:54,340,649...54,457,753
Ensembl chr 9:54,287,541...54,484,533
JBrowse link
G Stat5a signal transducer and activator of transcription 5A enables IDA
ISO
(MGI:5825436|PMID:12393611) RGD PMID:12393611, PMID:11064147 MGI:5825436, RGD:1624963 NCBI chr10:88,764,732...88,789,060
Ensembl chr10:88,764,732...88,789,057
JBrowse link
G Stat5b signal transducer and activator of transcription 5B IDA RGD PMID:11064147 RGD:1624963 NCBI chr10:88,686,207...88,712,313
Ensembl chr10:88,686,207...88,754,829
JBrowse link
G Stat6 signal transducer and activator of transcription 6 enables IMP
ISO
IDA
(MGI:3578694|PMID:15659391) RGD PMID:15659391, PMID:15584925, PMID:16648019 MGI:3578694, RGD:2298576, RGD:2298581 NCBI chr 7:70,946,228...70,963,542
Ensembl chr 7:70,946,228...70,964,484
JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit enables ISO (MGI:4838928|PMID:20956546) RGD PMID:20956546 MGI:4838928 NCBI chr10:67,325,101...67,371,588
Ensembl chr10:67,325,347...67,369,668
JBrowse link
G Tbx1 T-box transcription factor 1 enables ISO (PMID:11111039) RGD PMID:11111039 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Tbx2 T-box transcription factor 2 enables ISO (PMID:11111039) RGD PMID:11111039 NCBI chr10:73,278,932...73,290,764
Ensembl chr10:73,279,119...73,289,921
JBrowse link
G Tbx21 T-box transcription factor 21 enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr10:85,032,799...85,049,331
Ensembl chr10:85,032,799...85,049,331
JBrowse link
G Tbx3 T-box transcription factor 3 enables ISS
ISO
GO_REF:0000024
(PMID:11689487)
UniProt
RGD
PMID:11689487 GO_REF:0000024 NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
JBrowse link
G Tbx5 T-box transcription factor 5 enables ISS
ISO
GO_REF:0000024
(PMID:11431700), (PMID:12499378)
UniProt
RGD
PMID:11431700 PMID:12499378 GO_REF:0000024 NCBI chr12:42,059,688...42,148,226
Ensembl chr12:42,097,626...42,148,146
JBrowse link
G Tbxt T-box transcription factor T enables ISO (MGI:1927252|PMID:11071760), (MGI:3654744|PMID:16801560), (MGI:62384|PMID:8344258), (MGI:77340|PMID:7588606) RGD PMID:7588606 PMID:8344258 PMID:11071760 PMID:16801560 MGI:1927252 MGI:3654744 MGI:62384 MGI:77340 NCBI chr 1:52,887,067...52,900,691
Ensembl chr 1:52,887,067...52,894,832
JBrowse link
G Tcf3 transcription factor 3 contributes_to
enables
ISS
ISO
GO_REF:0000024
MGI:98510 (MGI:2429440|PMID:12070084), (MGI:3615721|PMID:16428437), (MGI:3759692|PMID:17938243), (MGI:3797314|PMID:18388149)
(PMID:15044608)
UniProt
RGD
PMID:12070084 PMID:15044608 PMID:16428437 PMID:17938243 PMID:18388149 GO_REF:0000024 MGI:2429440 MGI:3615721 MGI:3759692 MGI:3797314 NCBI chr 7:12,146,642...12,168,400
Ensembl chr 7:12,144,162...12,168,410
JBrowse link
G Tcf7l2 transcription factor 7 like 2 enables ISO (PMID:14661054), (PMID:16532032)
(MGI:1196720|PMID:9488439)
RGD PMID:9488439 PMID:14661054 PMID:16532032 MGI:1196720 NCBI chr 1:276,686,911...276,730,517
Ensembl chr 1:276,659,542...276,730,514
Ensembl chr 1:276,659,542...276,730,514
JBrowse link
G Tead4 TEA domain transcription factor 4 enables ISO (MGI:5426342|PMID:22529382) RGD PMID:22529382 MGI:5426342 NCBI chr 4:161,542,566...161,619,848
Ensembl chr 4:161,540,130...161,587,222
JBrowse link
G Tef TEF transcription factor, PAR bZIP family member IDA RGD PMID:1916262 RGD:70036 NCBI chr 7:123,033,971...123,058,606
Ensembl chr 7:123,043,503...123,058,604
JBrowse link
G Tfam transcription factor A, mitochondrial enables ISO (PMID:29445193) RGD PMID:29445193 NCBI chr20:18,594,057...18,606,106
Ensembl chr20:18,594,037...18,606,151
JBrowse link
G Tfap2a transcription factor AP-2 alpha enables IDA
ISO
(PMID:8321221)
(PMID:12586840), (PMID:1998122)
RGD PMID:1998122 PMID:8321221 PMID:12586840, PMID:16806101 RGD:5133260 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
JBrowse link
G Tfap2b transcription factor AP-2 beta enables ISO
ISS
(PMID:11505339), (PMID:12169688)
GO_REF:0000024
RGD
UniProt
PMID:11505339 PMID:12169688 GO_REF:0000024 NCBI chr 9:25,410,669...25,440,568
Ensembl chr 9:25,410,669...25,440,411
JBrowse link
G Tfap4 transcription factor AP-4 enables ISO (PMID:2123466) RGD PMID:2123466 NCBI chr10:11,204,616...11,222,975
Ensembl chr10:11,206,226...11,223,370
JBrowse link
G Thap1 THAP domain containing 1 enables ISS
ISO
GO_REF:0000024
(PMID:15863623), (PMID:17003378), (PMID:18073205), (PMID:19182804), (PMID:20010837)
UniProt
RGD
PMID:15863623 PMID:17003378 PMID:18073205 PMID:19182804 PMID:20010837 GO_REF:0000024 NCBI chr16:70,661,360...70,665,831
Ensembl chr16:70,661,320...70,665,831
JBrowse link
G Thra thyroid hormone receptor alpha IDA RGD PMID:8407924 RGD:1580108 NCBI chr10:86,657,285...86,684,935
Ensembl chr10:86,657,285...86,684,933
JBrowse link
G Thra_v1 thyroid hormone receptor alpha, variant 1 IDA RGD PMID:8407924 RGD:1580108
G Thra_v2 thyroid hormone receptor alpha, variant 2 IDA RGD PMID:8407924 RGD:1580108
G Thrb thyroid hormone receptor beta enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:8,890,578...9,239,815
Ensembl chr15:8,890,578...9,086,282
JBrowse link
G Tlx2 T-cell leukemia homeobox 2 enables ISO (PMID:10869550) RGD PMID:10869550 NCBI chr 4:114,766,401...114,768,243
Ensembl chr 4:114,766,714...114,768,029
Ensembl chr 4:114,766,714...114,768,029
JBrowse link
G Top2a DNA topoisomerase II alpha IDA RGD PMID:11334111 RGD:1580614 NCBI chr10:86,901,467...86,930,947
Ensembl chr10:86,901,007...86,932,154
JBrowse link
G Tp53 tumor protein p53 IDA RGD PMID:15632413 RGD:1643534 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 enables ISO (MGI:5462481|PMID:23241889) RGD PMID:23241889 MGI:5462481 NCBI chr 3:113,160,030...113,259,701
Ensembl chr 3:113,160,000...113,231,790
JBrowse link
G Tp63 tumor protein p63 enables ISO (MGI:3623698|PMID:16618808), (MGI:3794467|PMID:18326838)
(MGI:3801574|PMID:18256694)
RGD PMID:16618808 PMID:18256694 PMID:18326838 MGI:3623698 MGI:3794467 MGI:3801574 NCBI chr11:78,234,853...78,456,559
Ensembl chr11:78,234,800...78,456,501
JBrowse link
G Tp73 tumor protein p73 IDA RGD PMID:15805112 RGD:1599582 NCBI chr 5:171,355,876...171,415,354
Ensembl chr 5:171,355,876...171,415,354
JBrowse link
G Trim24 tripartite motif-containing 24 enables ISO (MGI:3771251|PMID:18026104) RGD PMID:18026104 MGI:3771251 NCBI chr 4:65,632,278...65,684,746
Ensembl chr 4:65,637,407...65,684,743
JBrowse link
G Tsn translin contributes_to IDA RGD PMID:9681436 RGD:634412 NCBI chr13:34,240,809...34,251,671
Ensembl chr13:34,238,717...34,253,910
JBrowse link
G Tsnax translin-associated factor X contributes_to IDA RGD PMID:9681436 RGD:634412 NCBI chr19:57,771,539...57,785,567
Ensembl chr19:57,771,398...57,785,543
JBrowse link
G Usf1 upstream transcription factor 1 enables IDA
ISO
(PMID:2249772), (PMID:8576131) RGD PMID:2249772 PMID:8576131, PMID:17408383 RGD:1626707 NCBI chr13:89,797,750...89,805,561
Ensembl chr13:89,797,800...89,805,558
JBrowse link
G Usf2 upstream transcription factor 2, c-fos interacting enables IDA
ISO
(PMID:8576131) RGD PMID:8576131, PMID:17408383 RGD:1626707 NCBI chr 1:89,371,798...89,383,005
Ensembl chr 1:89,371,794...89,382,463
JBrowse link
G Vdr vitamin D receptor IDA RGD PMID:16481392 RGD:1580357 NCBI chr 7:139,344,452...139,394,138
Ensembl chr 7:139,342,063...139,394,166
JBrowse link
G Wt1 WT1 transcription factor enables IDA
ISS
ISO
GO_REF:0000024
(PMID:1662794), (PMID:25258363), (PMID:7720589), (PMID:8119964)
UniProt
RGD
PMID:1662794 PMID:7720589 PMID:8119964 PMID:25258363, PMID:11071895 GO_REF:0000024, RGD:727305 NCBI chr 3:95,133,221...95,180,574
Ensembl chr 3:95,133,713...95,180,564
JBrowse link
G Xbp1 X-box binding protein 1 enables IDA
ISO
(MGI:5607245|PMID:8657566) RGD PMID:8657566, PMID:15486293 MGI:5607245, RGD:2326004 NCBI chr14:85,753,736...85,758,820
Ensembl chr14:85,753,760...85,758,145
JBrowse link
G Ybx1 Y box binding protein 1 IDA RGD PMID:16278212 RGD:1580627 NCBI chr 5:138,319,754...138,336,721
Ensembl chr 5:138,319,762...138,336,475
JBrowse link
G Yy1 YY1 transcription factor enables IDA
ISO
(MGI:5519177|PMID:23942234) RGD PMID:23942234, PMID:10713133 MGI:5519177, RGD:9588247 NCBI chr 6:132,702,443...132,726,848
Ensembl chr 6:132,702,448...132,727,046
JBrowse link
G Yy2 YY2 transcription factor enables ISO (PMID:23332764) RGD PMID:23332764 NCBI chr  X:40,285,923...40,289,545 JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 enables ISO
ISS
(PMID:9756912)
GO_REF:0000024
RGD
GO_Central
PMID:9756912 GO_REF:0000024 NCBI chr13:95,582,234...95,593,316
Ensembl chr13:95,589,668...95,591,236
JBrowse link
G Zbtb33 zinc finger and BTB domain containing 33 enables ISO (PMID:20403812) RGD PMID:20403812 NCBI chr  X:124,319,299...124,326,506
Ensembl chr  X:124,321,551...124,323,960
Ensembl chr  X:124,321,551...124,323,960
JBrowse link
G Zbtb4 zinc finger and BTB domain containing 4 enables ISO (PMID:20403812) RGD PMID:20403812 NCBI chr10:56,367,586...56,388,296
Ensembl chr10:56,381,813...56,385,960
JBrowse link
G Zbtb49 zinc finger and BTB domain containing 49 enables ISO (PMID:25245946) RGD PMID:25245946 NCBI chr14:77,322,014...77,343,736
Ensembl chr14:77,322,012...77,343,764
JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a enables ISO (MGI:3527922|PMID:15662416) RGD PMID:15662416 MGI:3527922 NCBI chr 7:11,429,266...11,446,119
Ensembl chr 7:11,432,049...11,444,786
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 IDA RGD PMID:15226419 RGD:2325878 NCBI chr17:54,656,627...54,714,920
Ensembl chr17:54,658,463...54,714,914
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 enables ISO (PMID:20516212) RGD PMID:20516212 NCBI chr 3:29,857,289...29,985,932
Ensembl chr 3:29,862,473...29,996,865
JBrowse link
G Zfp105 zinc finger protein 105 enables ISO
ISS
(PMID:8477855)
GO_REF:0000024
RGD
UniProt
PMID:8477855 GO_REF:0000024 NCBI chr 8:131,998,787...132,009,987
Ensembl chr 8:131,998,778...132,009,981
JBrowse link
G Zfp110 zinc finger protein 110 enables ISO (PMID:21170338) RGD PMID:21170338 NCBI chr 1:65,741,769...65,757,709
Ensembl chr 1:65,742,089...65,756,528
JBrowse link
G Zfp131 zinc finger protein 131 enables ISO (MGI:4818736|PMID:20303951) RGD PMID:20303951 MGI:4818736 NCBI chr 2:52,503,185...52,532,097
Ensembl chr 2:52,504,315...52,531,085
JBrowse link
G Zfp148 zinc finger protein 148 enables ISO (PMID:12771217) RGD PMID:12771217 NCBI chr11:70,509,909...70,618,422
Ensembl chr11:70,514,750...70,618,347
JBrowse link
G Zfp161 zinc finger protein 161 enables ISO (PMID:17714511) RGD PMID:17714511 NCBI chr 9:117,739,067...117,744,273
Ensembl chr 9:117,737,611...117,744,300
JBrowse link
G Zfp174 zinc finger protein 174 enables ISO (PMID:28473536) RGD PMID:28473536 NCBI chr10:11,928,150...11,935,415
Ensembl chr10:11,928,139...11,935,382
JBrowse link
G Zfp24 zinc finger protein 24 enables ISO
ISS
(PMID:11532988)
(MGI:4461127|PMID:18685786)
GO_REF:0000024
RGD
UniProt
PMID:11532988 PMID:18685786 GO_REF:0000024 MGI:4461127 NCBI chr18:15,910,175...15,921,757
Ensembl chr18:15,914,399...15,921,734
JBrowse link
G Zfp263 zinc finger protein 263 enables ISO (PMID:28473536) RGD PMID:28473536 NCBI chr10:12,023,677...12,035,189
Ensembl chr10:12,024,361...12,030,416
JBrowse link
G Zfp281 zinc finger protein 281 enables ISO (PMID:10405178), (PMID:12771217) RGD PMID:10405178 PMID:12771217 NCBI chr13:53,531,080...53,534,399
Ensembl chr13:53,506,925...53,534,353
JBrowse link
G Zfp316 zinc finger protein 316 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:13,346,414...13,367,374
Ensembl chr12:13,353,750...13,364,338
JBrowse link
G Zfp382 zinc finger protein 382 enables IDA PMID:11154279 NTNU_SB PMID:11154279 RGD:12790641 NCBI chr 1:88,582,641...88,603,219
Ensembl chr 1:88,581,206...88,605,697
JBrowse link
G Zfp384 zinc finger protein 384 IDA RGD PMID:10669742 RGD:1299381 NCBI chr 4:157,523,083...157,552,606
Ensembl chr 4:157,523,110...157,552,596
JBrowse link
G Zfp42 zinc finger protein 42 enables ISO (MGI:5469575|PMID:21530438) RGD PMID:21530438 MGI:5469575 NCBI chr16:52,016,590...52,026,346 JBrowse link
G Zfp423 zinc finger protein 423 enables IDA
ISO
IEA
IBA
(PMID:27727273)
MGI:2671784 (MGI:5805574|PMID:27727273)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:27727273, PMID:9774661, PMID:21873635 GO_REF:0000107 MGI:5805574, RGD:704357, RGD:13792537 NCBI chr19:20,147,201...20,405,999
Ensembl chr19:20,147,037...20,406,003
JBrowse link
G Zfp451 zinc finger protein 451 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:38,395,464...38,451,585
Ensembl chr 9:38,396,449...38,451,656
JBrowse link
G Zfp523 zinc finger protein 523 enables ISO (PMID:10893243) RGD PMID:10893243 NCBI chr20:7,750,786...7,786,020
Ensembl chr20:7,762,327...7,786,049
JBrowse link
G Zfp600 zinc finger protein 600 enables ISO (PMID:20585888) RGD PMID:20585888 Ensembl chr11:38,727,048...38,773,607 JBrowse link
G Zfp711 zinc finger protein 711 enables ISO (PMID:20346720) RGD PMID:20346720 NCBI chr  X:84,062,363...84,095,888
Ensembl chr  X:84,064,427...84,096,617
JBrowse link
G Zfp787 zinc finger protein 787 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:71,416,042...71,447,195
Ensembl chr 1:71,416,110...71,447,195
JBrowse link
G Zglp1 zinc finger, GATA-like protein 1 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:22,081,439...22,086,446
Ensembl chr 8:22,081,700...22,086,095
JBrowse link
G Zgpat zinc finger CCCH-type and G-patch domain containing enables ISO
ISS
(PMID:19644445)
GO_REF:0000024
RGD
UniProt
PMID:19644445 GO_REF:0000024 NCBI chr 3:176,865,078...176,881,603
Ensembl chr 3:176,865,156...176,881,549
JBrowse link
G Zic3 Zic family member 3 enables ISO (PMID:17764085) RGD PMID:17764085 NCBI chr  X:140,875,191...140,888,344
Ensembl chr  X:140,878,216...140,888,795
JBrowse link
G Zkscan3 zinc finger with KRAB and SCAN domains 3 enables ISO (PMID:23434374) RGD PMID:23434374 NCBI chr17:45,247,724...45,263,422
Ensembl chr17:45,247,776...45,263,418
JBrowse link
G Zscan10 zinc finger and SCAN domain containing 10 enables ISO (MGI:4457231|PMID:19740739) RGD PMID:19740739 MGI:4457231 NCBI chr10:12,929,471...12,939,439
Ensembl chr10:12,929,471...12,939,435
JBrowse link
C-rich strand telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nabp2 nucleic acid binding protein 2 NOT|enables ISO (PMID:25589350) RGD PMID:25589350 NCBI chr 7:2,820,006...2,825,627
Ensembl chr 7:2,820,007...2,825,608
JBrowse link
cAMP response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 enables IDA
IBA
ISO
PMID:21873635
(PMID:19861239), (PMID:23729669)
RGD PMID:19861239 PMID:23729669, PMID:12196528, PMID:21873635 RGD:727574, RGD:13792537 NCBI chr 3:60,721,137...60,795,951
Ensembl chr 3:60,721,135...60,795,951
JBrowse link
G Atf6 activating transcription factor 6 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:89,053,457...89,242,531
Ensembl chr13:89,055,983...89,242,443
JBrowse link
G Atf6b activating transcription factor 6 beta enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:4,414,283...4,422,283
Ensembl chr20:4,414,276...4,422,283
JBrowse link
G Atf7 activating transcription factor 7 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:144,131,382...144,223,463
Ensembl chr 7:144,136,325...144,223,429
JBrowse link
G Creb1 cAMP responsive element binding protein 1 enables ISO
IBA
(PMID:19861239)
(MGI:6414696|PMID:23729669)
PMID:21873635
RGD PMID:19861239 PMID:23729669, PMID:21873635 MGI:6414696, RGD:13792537 NCBI chr 9:71,229,753...71,298,994
Ensembl chr 9:71,230,108...71,293,435
JBrowse link
G Creb3 cAMP responsive element binding protein 3 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:59,063,532...59,068,196
Ensembl chr 5:59,063,531...59,068,188
JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 enables ISS
ISO
IBA
GO_REF:0000024
(MGI:4438316|PMID:19767743)
PMID:21873635
UniProt
RGD
PMID:19767743, PMID:21873635 GO_REF:0000024 MGI:4438316, RGD:13792537 NCBI chr 3:80,892,433...80,933,283
Ensembl chr 3:80,892,435...80,933,283
JBrowse link
G Creb3l2 cAMP responsive element binding protein 3-like 2 enables IBA
ISO
PMID:21873635
(MGI:4438315|PMID:19767744)
(PMID:17178827)
RGD PMID:17178827 PMID:19767744, PMID:21873635 MGI:4438315, RGD:13792537 NCBI chr 4:64,869,285...64,981,519
Ensembl chr 4:64,869,026...64,981,384
JBrowse link
G Creb3l3 cAMP responsive element binding protein 3-like 3 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:11,490,852...11,499,287
Ensembl chr 7:11,490,852...11,499,282
JBrowse link
G Creb3l4 cAMP responsive element binding protein 3-like 4 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:189,596,657...189,602,243
Ensembl chr 2:189,595,415...189,602,143
JBrowse link
G Creb5 cAMP responsive element binding protein 5 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:83,390,782...83,840,356
Ensembl chr 4:83,391,283...83,836,351
JBrowse link
G E4f1 E4F transcription factor 1 enables ISO (PMID:14645522) RGD PMID:14645522 NCBI chr10:13,812,335...13,835,847
Ensembl chr10:13,815,293...13,826,945
JBrowse link
G Hmga2 high mobility group AT-hook 2 enables ISO
ISS
(PMID:14645522)
GO_REF:0000024
RGD
UniProt
PMID:14645522 GO_REF:0000024 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit enables ISO (PMID:19861239) RGD PMID:19861239 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 enables ISS
ISO
GO_REF:0000024
(MGI:5543879|PMID:23897430)
UniProt
RGD
PMID:23897430 GO_REF:0000024 MGI:5543879 NCBI chr 5:63,781,801...63,822,890
Ensembl chr 5:63,781,801...63,821,637
JBrowse link
G Tcf12 transcription factor 12 IDA RGD PMID:7683670 RGD:729997 NCBI chr 8:78,343,634...78,657,738
Ensembl chr 8:78,345,754...78,655,856
JBrowse link
carbohydrate response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlxipl MLX interacting protein-like enables NAS PMID:20025850 BHF-UCL PMID:20025850 RGD:8554541 NCBI chr12:24,590,645...24,619,639 JBrowse link
centromeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpc centromere protein C enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:23,611,909...23,670,314
Ensembl chr14:23,611,735...23,670,475
JBrowse link
G Mlh3 mutL homolog 3 enables ISO (MGI:3612193|PMID:16260499) RGD PMID:16260499 MGI:3612193 NCBI chr 6:109,059,386...109,095,876
Ensembl chr 6:109,059,341...109,095,557
JBrowse link
G Msh2 mutS homolog 2 enables IEA
ISO
GO_REF:0000107
(MGI:3612193|PMID:16260499)
Ensembl
RGD
PMID:16260499 GO_REF:0000107 MGI:3612193 NCBI chr 6:11,215,951...11,274,916
Ensembl chr 6:11,215,963...11,274,932
JBrowse link
G Msh3 mutS homolog 3 enables ISO (MGI:3612193|PMID:16260499) RGD PMID:16260499 MGI:3612193 NCBI chr 2:21,790,048...21,931,791
Ensembl chr 2:21,790,044...21,931,720
JBrowse link
cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07015743.1 enables ISS GO_REF:0000024 AgBase GO_REF:0000024 Ensembl chr14:73,674,753...73,675,382 JBrowse link
G Ahr aryl hydrocarbon receptor enables ISO (PMID:23275542) RGD PMID:23275542 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464
JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator enables ISO (PMID:23275542) RGD PMID:23275542 NCBI chr 2:196,594,178...196,651,486
Ensembl chr 2:196,594,303...196,651,179
JBrowse link
G Atf2 activating transcription factor 2 enables ISO (PMID:2196176) RGD PMID:2196176 NCBI chr 3:60,721,137...60,795,951
Ensembl chr 3:60,721,135...60,795,951
JBrowse link
G Cxxc1 CXXC finger protein 1 IDA RGD PMID:21814290 RGD:9587757 NCBI chr18:70,192,520...70,197,871
Ensembl chr18:70,192,493...70,197,867
JBrowse link
G Dmrt1 doublesex and mab-3 related transcription factor 1 enables ISO (MGI:4818833|PMID:20616082), (MGI:4839662|PMID:20951351) RGD PMID:20616082 PMID:20951351 MGI:4818833 MGI:4839662 NCBI chr 1:243,477,403...243,582,629
Ensembl chr 1:243,477,493...243,582,629
JBrowse link
G E2f1 E2F transcription factor 1 enables ISO (PMID:15735762) RGD PMID:15735762 NCBI chr 3:150,062,895...150,073,721
Ensembl chr 3:150,047,826...150,073,721
JBrowse link
G E2f2 E2F transcription factor 2 enables ISO (PMID:15735762) RGD PMID:15735762 NCBI chr 5:154,516,611...154,540,228
Ensembl chr 5:154,522,119...154,540,265
JBrowse link
G E2f3 E2F transcription factor 3 enables ISO (PMID:15735762) RGD PMID:15735762 NCBI chr17:36,334,136...36,408,831
Ensembl chr17:36,334,147...36,408,831
JBrowse link
G E2f7 E2F transcription factor 7 enables ISO (PMID:22903062) RGD PMID:22903062 NCBI chr 7:53,275,659...53,318,261
Ensembl chr 7:53,275,676...53,316,481
JBrowse link
G E2f8 E2F transcription factor 8 enables ISO (PMID:22903062) RGD PMID:22903062 NCBI chr 1:104,185,436...104,203,683
Ensembl chr 1:104,187,100...104,202,591
JBrowse link
G Ell3 elongation factor for RNA polymerase II 3 enables ISS
ISO
GO_REF:0000024
(MGI:5448843|PMID:23273992)
UniProt
RGD
PMID:23273992 GO_REF:0000024 MGI:5448843 NCBI chr 3:113,400,395...113,405,869
Ensembl chr 3:113,401,734...113,405,829
JBrowse link
G Ep300 E1A binding protein p300 IDA RGD PMID:19057620 RGD:2311715 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Epas1 endothelial PAS domain protein 1 enables ISO (MGI:2451217|PMID:12464608) RGD PMID:12464608 MGI:2451217 NCBI chr 6:10,306,508...10,385,239
Ensembl chr 6:10,306,405...10,387,265
JBrowse link
G Esrrb estrogen-related receptor beta enables ISS
ISO
GO_REF:0000024
(MGI:5529430|PMID:23508100), (MGI:5887187|PMID:26206133)
UniProt
RGD
PMID:23508100 PMID:26206133 GO_REF:0000024 MGI:5529430 MGI:5887187 NCBI chr 6:110,360,940...110,458,406
Ensembl chr 6:110,410,141...110,455,906
JBrowse link
G Foxn2 forkhead box N2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:12,158,127...12,205,450
Ensembl chr 6:12,179,227...12,205,446
JBrowse link
G Foxn3 forkhead box N3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:123,183,720...123,577,719
Ensembl chr 6:123,187,726...123,577,695
JBrowse link
G Foxn4 forkhead box N4 enables ISO
IBA
(PMID:22323600)
(MGI:5314555|PMID:22323600)
PMID:21873635
RGD PMID:22323600, PMID:21873635 MGI:5314555, RGD:13792537 NCBI chr12:48,101,012...48,121,281
Ensembl chr12:48,101,673...48,121,270
JBrowse link
G Gata1 GATA binding protein 1 enables ISO (MGI:5009777|PMID:20855530) RGD PMID:20855530 MGI:5009777 NCBI chr  X:15,273,937...15,281,759
Ensembl chr  X:15,378,789...15,382,066
Ensembl chr  X:15,378,789...15,382,066
JBrowse link
G Gata3 GATA binding protein 3 enables ISO
ISS
(PMID:19232384)
(MGI:4355633|PMID:19666510), (MGI:5009777|PMID:20855530)
GO_REF:0000024
RGD
UniProt
PMID:19232384 PMID:19666510 PMID:20855530 GO_REF:0000024 MGI:4355633 MGI:5009777 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Gata4 GATA binding protein 4 enables IDA PMID:20855530 UniProt PMID:20855530 RGD:8554432 NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965
JBrowse link
G Gata5 GATA binding protein 5 enables ISO (MGI:5009777|PMID:20855530) RGD PMID:20855530 MGI:5009777 NCBI chr 3:175,701,278...175,709,465
Ensembl chr 3:175,701,280...175,709,465
JBrowse link
G Gata6 GATA binding protein 6 enables IDA PMID:20855530 UniProt PMID:20855530 RGD:8554432 NCBI chr18:2,415,821...2,447,087
Ensembl chr18:2,416,552...2,446,338
JBrowse link
G Hmga1 high mobility group AT-hook 1 enables ISO (PMID:9253416) RGD PMID:9253416 NCBI chr20:7,132,501...7,140,155
Ensembl chr20:7,136,007...7,138,980
JBrowse link
G Hmgb2 high mobility group box 2 enables ISS
ISO
GO_REF:0000024
(MGI:5490149|PMID:23495099)
AgBase
RGD
PMID:23495099 GO_REF:0000024 MGI:5490149 NCBI chr16:36,077,615...36,080,191
Ensembl chr16:36,077,617...36,080,191
Ensembl chr11:36,077,617...36,080,191
JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 enables ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr11:49,708,038...49,709,128
Ensembl chr16:36,077,617...36,080,191
Ensembl chr11:36,077,617...36,080,191
JBrowse link
G Hnf1b HNF1 homeobox B enables IDA
ISO
(MGI:2683811|PMID:14570708), (MGI:3039054|PMID:15067314), (MGI:3613360|PMID:16274963), (MGI:79334|PMID:1685988) RGD PMID:1685988 PMID:14570708 PMID:15067314 PMID:16274963, PMID:1673926 MGI:2683811 MGI:3039054 MGI:3613360 MGI:79334, RGD:729944 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IDA RGD PMID:16640558 RGD:12904755 NCBI chr 3:159,902,441...159,965,003
Ensembl chr 3:159,902,441...159,965,003
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IDA RGD PMID:15361071 RGD:10002777 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654
JBrowse link
G Hoxa13 homeo box A13 enables ISO (MGI:5828705|PMID:27706137) RGD PMID:27706137 MGI:5828705 NCBI chr 4:82,313,383...82,315,550
Ensembl chr 4:82,228,017...82,229,397
JBrowse link
G Hoxd13 homeo box D13 enables ISO (MGI:5828705|PMID:27706137) RGD PMID:27706137 MGI:5828705 NCBI chr 3:61,590,376...61,593,692
Ensembl chr 3:61,590,376...61,593,692
JBrowse link
G Irf4 interferon regulatory factor 4 enables ISO (MGI:6269211|PMID:30413670) RGD PMID:30413670 MGI:6269211 NCBI chr17:34,886,746...34,905,191
Ensembl chr17:34,886,739...34,905,117
JBrowse link
G Irf7 interferon regulatory factor 7 enables ISO (MGI:5792628|PMID:27129230) RGD PMID:27129230 MGI:5792628 NCBI chr 1:214,249,388...214,252,909
Ensembl chr 1:214,248,837...214,252,456
JBrowse link
G Isl1 ISL LIM homeobox 1 enables IBA
ISO
PMID:21873635
(PMID:19619559)
RGD PMID:19619559, PMID:21873635 RGD:13792537 NCBI chr 2:48,488,911...48,501,217
Ensembl chr 2:48,487,736...48,501,436
JBrowse link
G Isl2 ISL LIM homeobox 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:60,117,565...60,122,716
Ensembl chr 8:60,117,729...60,122,211
JBrowse link
G Klf1 Kruppel like factor 1 enables ISO (PMID:21539536) RGD PMID:21539536 NCBI chr19:26,016,289...26,019,557
Ensembl chr19:26,016,382...26,019,553
JBrowse link
G Klf4 Kruppel like factor 4 enables ISO (PMID:21539536) RGD PMID:21539536 NCBI chr 5:72,283,311...72,287,669
Ensembl chr 5:72,283,313...72,287,669
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 enables ISO (MGI:3510574|PMID:15545629) RGD PMID:15545629 MGI:3510574 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Lhx1 LIM homeobox 1 enables ISO (MGI:5697986|PMID:26494787) RGD PMID:26494787 MGI:5697986 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
G Mef2c myocyte enhancer factor 2C enables ISO (MGI:3588628|PMID:16140986), (MGI:4819086|PMID:20399744) RGD PMID:16140986 PMID:20399744 MGI:3588628 MGI:4819086 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 enables ISO (MGI:4441249|PMID:18593560) RGD PMID:18593560 MGI:4441249 NCBI chr 1:141,532,390...141,533,908
Ensembl chr 1:141,532,390...141,533,908
JBrowse link
G Mixl1 Mix paired-like homeobox 1 enables ISO (MGI:5448504|PMID:22265737) RGD PMID:22265737 MGI:5448504 NCBI chr13:97,278,258...97,282,299
Ensembl chr13:98,973,041...98,975,426
Ensembl chr13:98,973,041...98,975,426
JBrowse link
G Msx1 msh homeobox 1 enables ISO (MGI:5805569|PMID:27741242) RGD PMID:27741242 MGI:5805569 NCBI chr14:77,712,262...77,716,061
Ensembl chr14:77,712,240...77,716,059
JBrowse link
G Mtf1 metal-regulatory transcription factor 1 enables ISO (PMID:15735762)
(MGI:1266982|PMID:9582278), (MGI:1926646|PMID:10952993), (MGI:1926647|PMID:10931824), (MGI:3694414|PMID:16886906)
RGD PMID:9582278 PMID:10931824 PMID:10952993 PMID:15735762 PMID:16886906 MGI:1266982 MGI:1926646 MGI:1926647 MGI:3694414 NCBI chr 5:142,797,340...142,843,896
Ensembl chr 5:142,797,366...142,842,122
Ensembl chr 5:142,797,366...142,842,122
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor enables ISO (MGI:3522552|PMID:15511642) RGD PMID:15511642 MGI:3522552 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Myod1 myogenic differentiation 1 enables ISO (MGI:2651740|PMID:12486129), (MGI:3835969|PMID:19121967) RGD PMID:12486129 PMID:19121967 MGI:2651740 MGI:3835969 NCBI chr 1:102,396,538...102,399,248
Ensembl chr 1:102,396,538...102,399,248
JBrowse link
G Myog myogenin enables ISO (MGI:4819086|PMID:20399744) RGD PMID:20399744 MGI:4819086 NCBI chr13:51,126,459...51,129,048
Ensembl chr13:51,126,459...51,129,048
JBrowse link
G Myt1 myelin transcription factor 1 enables ISO (MGI:3769584|PMID:17442045) RGD PMID:17442045 MGI:3769584 NCBI chr 3:177,281,365...177,341,550
Ensembl chr 3:177,310,753...177,341,547
JBrowse link
G Nanog Nanog homeobox enables ISO (MGI:4946171|PMID:21062744) RGD PMID:21062744 MGI:4946171 NCBI chr 4:155,531,906...155,539,268
Ensembl chr 4:155,531,906...155,539,268
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 enables ISO (MGI:85703|PMID:9017603) RGD PMID:9017603 MGI:85703 NCBI chr19:38,039,542...38,114,003
Ensembl chr19:38,039,564...38,114,003
JBrowse link
G Nfe2 nuclear factor, erythroid 2 contributes_to ISO (PMID:16263792) RGD PMID:16263792 NCBI chr 7:144,872,739...144,880,092
Ensembl chr 7:144,872,747...144,880,092
JBrowse link
G Nfic nuclear factor I/C IDA RGD PMID:10521600 RGD:633408 NCBI chr 7:11,151,941...11,179,544
Ensembl chr 7:11,152,038...11,177,664
JBrowse link
G Nkx2-2 NK2 homeobox 2 enables ISO (MGI:4420345|PMID:19759004) RGD PMID:19759004 MGI:4420345 NCBI chr 3:141,408,460...141,419,083
Ensembl chr 3:141,408,798...141,411,170
JBrowse link
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 enables ISS
ISO
GO_REF:0000024
(MGI:5526909|PMID:23221024), (MGI:5526936|PMID:19682428)
UniProt
RGD
PMID:19682428 PMID:23221024 GO_REF:0000024 MGI:5526909 MGI:5526936 NCBI chr15:8,730,871...8,757,165
Ensembl chr15:8,730,871...8,757,165
JBrowse link
G Pax2 paired box 2 enables ISS
ISO
GO_REF:0000024
(MGI:3768605|PMID:17785448)
(PMID:19118900)
UniProt
RGD
PMID:17785448 PMID:19118900 GO_REF:0000024 MGI:3768605 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pou5f1 POU class 5 homeobox 1 enables ISS
ISO
GO_REF:0000024
(MGI:5490149|PMID:23495099)
AgBase
RGD
PMID:23495099 GO_REF:0000024 MGI:5490149 NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994
JBrowse link
G RGD1559962 similar to High mobility group protein 2 (HMG-2) enables ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:20,416,735...20,417,959
Ensembl chr 1:20,417,008...20,417,637
JBrowse link
G RGD1561694 similar to High mobility group protein 2 (HMG-2) enables ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr14:73,674,647...73,675,638 JBrowse link
G Runx2 RUNX family transcription factor 2 enables ISO (MGI:6453224|PMID:31545469) RGD PMID:31545469 MGI:6453224 NCBI chr 9:18,564,743...18,773,092
Ensembl chr 9:18,564,927...18,773,092
JBrowse link
G Sall1 spalt-like transcription factor 1 enables ISO (MGI:4946171|PMID:21062744) RGD PMID:21062744 MGI:4946171 NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
JBrowse link
G Scx scleraxis bHLH transcription factor enables ISO (MGI:3716232|PMID:17430895) RGD PMID:17430895 MGI:3716232 NCBI chr 7:117,519,075...117,521,093
Ensembl chr 7:117,519,075...117,521,093
JBrowse link
G Smad3 SMAD family member 3 enables ISS
ISO
GO_REF:0000024
(PMID:21947082)
UniProt
RGD
PMID:21947082 GO_REF:0000024 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Sox11 SRY-box transcription factor 11 enables ISS
ISO
GO_REF:0000024
(MGI:5285123|PMID:21527504), (MGI:5285167|PMID:19808959)
UniProt
RGD
PMID:19808959 PMID:21527504 GO_REF:0000024 MGI:5285123 MGI:5285167 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983
JBrowse link
G Sox5 SRY-box transcription factor 5 enables IDA PMID:26150426 UniProt PMID:26150426 RGD:11526869 NCBI chr 4:178,062,267...179,031,991
Ensembl chr 4:178,066,165...178,441,547
JBrowse link
G Sox6 SRY-box transcription factor 6 enables IDA PMID:26150426 UniProt PMID:26150426 RGD:11526869 NCBI chr 1:185,631,702...186,186,192
Ensembl chr 1:185,673,177...186,182,829
JBrowse link
G Sox8 SRY-box transcription factor 8 enables ISO (MGI:2668257|PMID:12732652), (MGI:3578469|PMID:15102707) RGD PMID:12732652 PMID:15102707 MGI:2668257 MGI:3578469 NCBI chr10:14,932,348...14,937,336
Ensembl chr10:14,932,348...14,937,336
JBrowse link
G Sox9 SRY-box transcription factor 9 enables IDA
ISO
ISS
PMID:10805756
(MGI:5142387|PMID:10805756), (MGI:5284779|PMID:17525254), (MGI:5440405|PMID:22500632)
GO_REF:0000024
PMID:26150426
(PMID:10805756)
RGD
UniProt
PMID:10805756 PMID:17525254 PMID:22500632, PMID:10805756, PMID:26150426 GO_REF:0000024 MGI:5142387 MGI:5284779 MGI:5440405, RGD:8553866, RGD:11526869 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Sp1 Sp1 transcription factor enables IGI
ISO
PMID:10362258
(MGI:1277036|PMID:9705320), (MGI:3522552|PMID:15511642), (MGI:4430122|PMID:19943855)
RGD PMID:9705320 PMID:15511642 PMID:19943855, PMID:10362258 MGI:1277036 MGI:3522552 MGI:4430122, RGD:13506263 NCBI chr 7:144,014,173...144,044,635
Ensembl chr 7:144,014,173...144,044,629
JBrowse link
G Sp3 Sp3 transcription factor enables IGI
ISO
PMID:10362258
(MGI:3522552|PMID:15511642), (MGI:4430122|PMID:19943855)
RGD PMID:15511642 PMID:19943855, PMID:10362258 MGI:3522552 MGI:4430122, RGD:13506263 NCBI chr 3:59,644,579...59,689,011
Ensembl chr 3:59,646,015...59,688,692
JBrowse link
G Spi1 Spi-1 proto-oncogene enables ISO (PMID:28481873), (PMID:30718772), (PMID:31018969), (PMID:31314592)
(MGI:5922877|PMID:28338898), (MGI:6269211|PMID:30413670), (MGI:6453080|PMID:31314592), (MGI:6508514|PMID:30171019), (MGI:6508515|PMID:30355733), (PMID:30718772)
RGD PMID:28338898 PMID:28481873 PMID:30171019 PMID:30355733 PMID:30413670 PMID:30718772 PMID:31018969 PMID:31314592 MGI:5922877 MGI:6269211 MGI:6453080 MGI:6508514 MGI:6508515 NCBI chr 3:79,918,127...79,937,708
Ensembl chr 3:79,918,969...79,938,301
JBrowse link
G Tbx19 T-box transcription factor 19 enables ISO (MGI:5440096|PMID:23070814) RGD PMID:23070814 MGI:5440096 NCBI chr13:83,403,263...83,426,305
Ensembl chr13:83,403,264...83,425,641
JBrowse link
G Tcf3 transcription factor 3 enables ISO (MGI:3588628|PMID:16140986) RGD PMID:16140986 MGI:3588628 NCBI chr 7:12,146,642...12,168,400
Ensembl chr 7:12,144,162...12,168,410
JBrowse link
G Tead1 TEA domain transcription factor 1 enables ISO (PMID:26045994) RGD PMID:26045994 NCBI chr 1:177,495,500...177,714,795
Ensembl chr 1:177,495,782...177,707,061
JBrowse link
G Tfap2a transcription factor AP-2 alpha enables ISO (MGI:4430122|PMID:19943855) RGD PMID:19943855 MGI:4430122 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
JBrowse link
G Tfap2b transcription factor AP-2 beta enables ISO (PMID:16373396) RGD PMID:16373396 NCBI chr 9:25,410,669...25,440,568
Ensembl chr 9:25,410,669...25,440,411
JBrowse link
G Tfcp2 transcription factor CP2 enables ISO (PMID:16263792) RGD PMID:16263792 NCBI chr 7:142,138,836...142,181,036
Ensembl chr 7:142,138,844...142,180,997
JBrowse link
G Tfdp1 transcription factor Dp-1 enables ISO (MGI:3525422|PMID:15448153) RGD PMID:15448153 MGI:3525422 NCBI chr16:81,088,642...81,127,244
Ensembl chr16:81,089,292...81,127,257
JBrowse link
G Tiparp TCDD-inducible poly(ADP-ribose) polymerase enables ISO (PMID:23275542) RGD PMID:23275542 NCBI chr 2:157,316,293...157,342,979
Ensembl chr 2:157,316,266...157,341,469
JBrowse link
G Tp53 tumor protein p53 enables ISO (PMID:22578566) RGD PMID:22578566 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 enables ISO
IEA
(PMID:10646863)
GO_REF:0000107
RGD
Ensembl
PMID:10646863 GO_REF:0000107 NCBI chr 9:10,738,211...10,758,403
Ensembl chr 9:10,738,222...10,757,954
JBrowse link
G Xbp1 X-box binding protein 1 enables ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:2196176)
UniProt
Ensembl
RGD
PMID:2196176 GO_REF:0000024 GO_REF:0000107 NCBI chr14:85,753,736...85,758,820
Ensembl chr14:85,753,760...85,758,145
JBrowse link
G Yy1 YY1 transcription factor enables ISO (PMID:15329343), (PMID:16260628) RGD PMID:15329343 PMID:16260628 NCBI chr 6:132,702,443...132,726,848
Ensembl chr 6:132,702,448...132,727,046
JBrowse link
G Yy2 YY2 transcription factor enables ISO (PMID:16260628)
(MGI:3607410|PMID:16260628)
RGD PMID:16260628 MGI:3607410 NCBI chr  X:40,285,923...40,289,545 JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B enables ISO (MGI:5446998|PMID:22730529), (MGI:82589|PMID:8702912) RGD PMID:8702912 PMID:22730529 MGI:5446998 MGI:82589 NCBI chr 2:188,704,989...188,719,674
Ensembl chr 2:188,704,687...188,718,704
JBrowse link
G Zfp322a zinc finger protein 322a enables ISO (MGI:6114965|PMID:24550733) RGD PMID:24550733 MGI:6114965 NCBI chr17:44,025,036...44,040,900
Ensembl chr17:44,025,267...44,039,284
JBrowse link
G Zfp395 zinc finger protein 395 enables ISO (PMID:11853404)
(MGI:3757810|PMID:17693064)
RGD PMID:11853404 PMID:17693064 MGI:3757810 NCBI chr15:48,789,320...48,803,025
Ensembl chr15:48,789,165...48,803,147
JBrowse link
G Zfp516 zinc finger protein 516 enables ISO (MGI:5616937|PMID:25578880) RGD PMID:25578880 MGI:5616937 NCBI chr18:79,768,387...79,857,909
Ensembl chr18:79,773,608...79,854,192
JBrowse link
G Zfp704 zinc finger protein 704 enables ISO (MGI:3757810|PMID:17693064) RGD PMID:17693064 MGI:3757810 NCBI chr 2:94,377,059...94,559,838
Ensembl chr 2:94,377,072...94,551,529
JBrowse link
core promoter sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 enables ISO (PMID:25336585) RGD PMID:25336585 NCBI chr 5:144,444,390...144,479,430
Ensembl chr 5:144,448,792...144,479,306
JBrowse link
G Ago2 argonaute RISC catalytic component 2 enables IEA
ISO
GO_REF:0000107
(PMID:25336585)
Ensembl
RGD
PMID:25336585 GO_REF:0000107 NCBI chr 7:114,339,607...114,377,277
Ensembl chr 7:114,339,434...114,380,613
JBrowse link
G Dr1 down-regulator of transcription 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:2,463,651...2,475,004
Ensembl chr14:2,463,643...2,474,780
Ensembl chr14:2,463,643...2,474,780
JBrowse link
G Drap1 Dr1 associated protein 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:220,803,783...220,806,480
Ensembl chr 1:220,803,796...220,806,433
JBrowse link
G Fendrr FOXF1 adjacent non-coding developmental regulatory RNA enables ISO (MGI:5462100|PMID:23369715) RGD PMID:23369715 MGI:5462100 NCBI chr19:52,991,283...53,010,509 JBrowse link
G Foxp1 forkhead box P1 enables ISO (PMID:28218735) RGD PMID:28218735 NCBI chr 4:131,362,178...131,963,466
Ensembl chr 4:131,366,744...131,694,755
JBrowse link
G Hdac1 histone deacetylase 1 enables ISO (PMID:23629966) RGD PMID:23629966 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723
JBrowse link
G Jph2 junctophilin 2 enables ISS
ISO
GO_REF:0000024
(MGI:6270069|PMID:30409805)
UniProt
RGD
PMID:30409805 GO_REF:0000024 MGI:6270069 NCBI chr 3:159,709,998...159,776,536
Ensembl chr 3:159,712,325...159,775,643
JBrowse link
G Kcnip3 potassium voltage-gated channel interacting protein 3 enables ISO (MGI:5882899|PMID:15746104) RGD PMID:15746104 MGI:5882899 NCBI chr 3:120,023,062...120,087,650
Ensembl chr 3:120,023,917...120,087,136
JBrowse link
G Klf10 Kruppel-like factor 10 enables ISS
ISO
GO_REF:0000024
(MGI:4438787|PMID:20070857)
UniProt
RGD
PMID:20070857 GO_REF:0000024 MGI:4438787 NCBI chr 7:77,156,010...77,162,096
Ensembl chr 7:77,156,006...77,162,148
JBrowse link
G Mmp12 matrix metallopeptidase 12 enables IEA
ISO
GO_REF:0000107
(PMID:24784232)
Ensembl
RGD
PMID:24784232 GO_REF:0000107 NCBI chr 8:5,594,717...5,616,494
Ensembl chr 8:5,606,592...5,616,493
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor enables ISO (PMID:30873824) RGD PMID:30873824 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Nkx2-1 NK2 homeobox 1 enables IMP PMID:9425125 CAFA PMID:9425125 RGD:12792996 NCBI chr 6:77,418,096...77,423,383
Ensembl chr 6:77,418,096...77,421,286
JBrowse link
G Npm1 nucleophosmin 1 enables ISO (PMID:19160485) RGD PMID:19160485 NCBI chr10:18,080,949...18,091,062
Ensembl chr10:18,080,950...18,090,950
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 enables ISO (PMID:17081986) RGD PMID:17081986 NCBI chr18:31,728,373...32,704,022
Ensembl chr18:31,728,373...31,749,647
JBrowse link
G Polr2a RNA polymerase II subunit A enables ISO (MGI:5428344|PMID:22723415) RGD PMID:22723415 MGI:5428344 NCBI chr10:56,339,277...56,364,888
Ensembl chr10:56,339,284...56,365,084
JBrowse link
G Snapc3 small nuclear RNA activating complex, polypeptide 3 contributes_to IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:101,526,591...101,554,015
Ensembl chr 5:101,526,551...101,553,489
JBrowse link
G Taf4 TATA-box binding protein associated factor 4 contributes_to ISO (PMID:15601843) RGD PMID:15601843 NCBI chr 3:175,300,842...175,364,655
Ensembl chr 3:175,301,879...175,327,689
JBrowse link
G Tbp TATA box binding protein enables ISO (PMID:9841876) RGD PMID:9841876 NCBI chr 1:57,491,381...57,509,335
Ensembl chr 1:57,491,643...57,508,449
JBrowse link
G Tp53 tumor protein p53 enables ISO (PMID:23629966) RGD PMID:23629966 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Zbtb17 zinc finger and BTB domain containing 17 enables ISO (PMID:19160485) RGD PMID:19160485 NCBI chr 5:159,993,799...160,014,899
Ensembl chr 5:159,993,799...160,014,895
JBrowse link
DNA replication origin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc45 cell division cycle 45 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:86,328,785...86,354,099
Ensembl chr11:86,329,012...86,358,453
JBrowse link
G Cdc6 cell division cycle 6 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:86,819,477...86,833,301
Ensembl chr10:86,819,472...86,833,402
JBrowse link
G Ddx11 DEAD/H-box helicase 11 enables ISO (PMID:27477908) RGD PMID:27477908 NCBI chr 9:114,113,642...114,133,908
Ensembl chr 9:114,111,580...114,132,492
JBrowse link
G Dhx9 DExH-box helicase 9 enables ISO (PMID:24990949) RGD PMID:24990949 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link
G Grwd1 glutamate-rich WD repeat containing 1 enables ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:25990725)
UniProt
Ensembl
RGD
PMID:25990725 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:101,813,356...101,819,058
Ensembl chr 1:101,813,684...101,819,478
JBrowse link
G Kat7 lysine acetyltransferase 7 enables ISO
IEA
(PMID:21856198)
GO_REF:0000107
RGD
Ensembl
PMID:21856198 GO_REF:0000107 NCBI chr10:83,095,067...83,128,342
Ensembl chr10:83,095,068...83,128,297
JBrowse link
G Mcm10 minichromosome maintenance 10 replication initiation factor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:77,224,218...77,245,486
Ensembl chr17:77,224,112...77,246,478
JBrowse link
G Mcm2 minichromosome maintenance complex component 2 enables IBA
ISO
PMID:21873635
(MGI:2673102|PMID:12941272)
RGD PMID:12941272, PMID:21873635 MGI:2673102, RGD:13792537 NCBI chr 4:120,825,699...120,840,221
Ensembl chr 4:120,825,699...120,840,111
JBrowse link
G Mcm3 minichromosome maintenance complex component 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:26,914,057...26,932,201
Ensembl chr 9:26,914,057...26,932,201
JBrowse link
G Mcm4 minichromosome maintenance complex component 4 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:89,511,191...89,524,892
Ensembl chr11:89,511,191...89,524,892
JBrowse link
G Mcm5 minichromosome maintenance complex component 5 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:14,523,482...14,561,281
Ensembl chr19:14,523,554...14,561,278
JBrowse link
G Mcm6 minichromosome maintenance complex component 6 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:45,042,882...45,068,073
Ensembl chr13:45,042,882...45,068,077
JBrowse link
G Mcm7 minichromosome maintenance complex component 7 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:19,306,615...19,313,877
Ensembl chr12:19,306,607...19,314,016
JBrowse link
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:125,470,499...125,500,795
Ensembl chr 3:125,470,551...125,500,795
JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:34,818,093...34,930,157
Ensembl chr20:34,846,804...34,929,965
JBrowse link
G Mcmdc1 minichromosome maintenance deficient domain containing 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Mcmdc2 minichromosome maintenance domain containing 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:8,973,861...9,039,616
Ensembl chr 5:8,978,010...9,038,594
JBrowse link
G Orc1 origin recognition complex, subunit 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:128,186,651...128,212,901
Ensembl chr 5:128,190,708...128,210,445
JBrowse link
G Orc2 origin recognition complex, subunit 2 enables IBA
ISO
PMID:21873635
(MGI:2673102|PMID:12941272)
RGD PMID:12941272, PMID:21873635 MGI:2673102, RGD:13792537 NCBI chr 9:65,350,630...65,387,293
Ensembl chr 9:65,350,627...65,387,169
JBrowse link
G Orc3 origin recognition complex, subunit 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:50,019,159...50,075,533
Ensembl chr 5:50,020,815...50,075,454
JBrowse link
G Orc4 origin recognition complex, subunit 4 enables ISO
ISS
IBA
(PMID:9353276)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:9353276, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 3:33,034,913...33,075,833
Ensembl chr 3:33,037,034...33,075,685
JBrowse link
G Orc5 origin recognition complex, subunit 5 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:9,160,050...9,223,998
Ensembl chr 4:9,160,067...9,223,997
JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:62,382,604...62,698,830
Ensembl chr  X:62,382,608...62,698,830
JBrowse link
double-stranded telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 enables ISO (PMID:24703901) RGD PMID:24703901 NCBI chr15:27,849,943...27,852,083
Ensembl chr15:27,849,979...27,852,082
JBrowse link
G Hmbox1 homeobox containing 1 enables ISO (PMID:23685356) RGD PMID:23685356 NCBI chr15:48,194,709...48,326,310
Ensembl chr15:48,199,995...48,284,548
JBrowse link
G Pura purine rich element binding protein A enables ISO
IEA
(PMID:15777841)
GO_REF:0000107
RGD
Ensembl
PMID:15777841 GO_REF:0000107 NCBI chr18:29,104,712...29,114,918
Ensembl chr18:29,110,242...29,111,156
JBrowse link
G Rad50 RAD50 double strand break repair protein enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:39,002,130...39,054,042
Ensembl chr10:39,001,498...39,054,142
JBrowse link
G Terf1 telomeric repeat binding factor 1 enables ISO
IBA
(PMID:1406665)
PMID:21873635
(PMID:12768206), (PMID:12782650), (PMID:15608617), (PMID:21852327)
RGD PMID:1406665 PMID:12768206 PMID:12782650 PMID:15608617 PMID:21852327, PMID:21873635 RGD:13792537 NCBI chr 5:2,853,455...2,882,731
Ensembl chr 5:2,853,459...2,882,668
JBrowse link
G Terf2 telomeric repeat binding factor 2 enables IBA
ISO
PMID:21873635
(MGI:1097302|PMID:9326950)
(PMID:18812185), (PMID:21852327)
RGD PMID:9326950 PMID:18812185 PMID:21852327, PMID:21873635 MGI:1097302, RGD:13792537 NCBI chr19:39,271,992...39,301,506
Ensembl chr19:39,272,499...39,300,893
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 contributes_to ISO (PMID:10409678) RGD PMID:10409678 NCBI chr 9:79,659,275...79,748,050
Ensembl chr 9:79,659,251...79,748,078
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 contributes_to ISO (PMID:10409678) RGD PMID:10409678 NCBI chr 7:123,259,881...123,280,613
Ensembl chr 7:123,259,761...123,280,612
JBrowse link
G Zbtb48 zinc finger and BTB domain containing 48 enables ISO (PMID:28082411) RGD PMID:28082411 NCBI chr 5:169,191,771...169,200,140
Ensembl chr 5:169,191,753...169,200,109
JBrowse link
E-box binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor enables ISS
ISO
GO_REF:0000024
(MGI:4820700|PMID:20106950)
UniProt
RGD
PMID:20106950 GO_REF:0000024 MGI:4820700 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464
JBrowse link
G Arntl aryl hydrocarbon receptor nuclear translocator-like enables ISO
IEA
ISS
(PMID:12738229), (PMID:23785138)
GO_REF:0000107
(MGI:4410413|PMID:19605937), (MGI:4820700|PMID:20106950), (MGI:5568140|PMID:24736997)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:12738229 PMID:19605937 PMID:20106950 PMID:23785138 PMID:24736997 GO_REF:0000024 GO_REF:0000107 MGI:4410413 MGI:4820700 MGI:5568140 NCBI chr 1:178,039,002...178,137,469
Ensembl chr 1:178,039,063...178,137,465
JBrowse link
G Arntl2 aryl hydrocarbon receptor nuclear translocator-like 2 enables ISO (PMID:12738229)
(MGI:4410413|PMID:19605937)
RGD PMID:12738229 PMID:19605937 MGI:4410413 NCBI chr 4:181,103,774...181,158,415
Ensembl chr 4:181,103,774...181,214,994
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 enables ISO (PMID:10903890), (PMID:11736660) RGD PMID:10903890 PMID:11736660 NCBI chr 7:28,038,662...28,040,504
Ensembl chr 7:28,038,662...28,040,510
JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 enables ISO (PMID:14561729) RGD PMID:14561729 NCBI chr 1:216,154,002...216,156,409
Ensembl chr 1:216,154,002...216,156,409
JBrowse link
G Atoh8 atonal bHLH transcription factor 8 enables ISO (PMID:24236640) RGD PMID:24236640 NCBI chr 4:100,067,341...100,099,517
Ensembl chr 4:100,067,341...100,099,517
JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 enables IEA
ISO
ISS
GO_REF:0000107
(MGI:2388855|PMID:12397359), (MGI:5297789|PMID:15147242), (MGI:5306297|PMID:17487425), (MGI:6282958|PMID:30012868)
GO_REF:0000024
(PMID:12397359), (PMID:12624110), (PMID:14672706), (PMID:15193144), (PMID:15560782), (PMID:18411297), (PMID:28797635)
Ensembl
RGD
UniProt
PMID:12397359 PMID:12624110 PMID:14672706 PMID:15147242 PMID:15193144 PMID:15560782 PMID:17487425 PMID:18411297 PMID:28797635 PMID:30012868 GO_REF:0000024 GO_REF:0000107 MGI:2388855 MGI:5297789 MGI:5306297 MGI:6282958 NCBI chr 4:140,703,619...140,709,319
Ensembl chr 4:140,703,619...140,709,319
JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 enables IEA
ISO
GO_REF:0000107
(MGI:2388855|PMID:12397359), (MGI:5297789|PMID:15147242), (MGI:5297791|PMID:12657651), (MGI:5306297|PMID:17487425)
(PMID:14672706), (PMID:15193144)
Ensembl
RGD
PMID:12397359 PMID:12657651 PMID:14672706 PMID:15147242 PMID:15193144 PMID:17487425 GO_REF:0000107 MGI:2388855 MGI:5297789 MGI:5297791 MGI:5306297 NCBI chr 4:180,230,742...180,235,138
Ensembl chr 4:180,232,382...180,234,804
JBrowse link
G Ciart circadian associated repressor of transcription enables ISO (MGI:5568140|PMID:24736997) RGD PMID:24736997 MGI:5568140 NCBI chr 2:197,987,705...197,991,198
Ensembl chr 2:197,987,705...197,991,574
JBrowse link
G Clock clock circadian regulator enables IEA
ISO
IBA
ISS
GO_REF:0000107
(MGI:4410413|PMID:19605937), (MGI:4820700|PMID:20106950), (MGI:4837055|PMID:20430893), (MGI:5553247|PMID:12738229), (MGI:6282958|PMID:30012868)
PMID:21873635
GO_REF:0000024
(PMID:18411297), (PMID:23785138)
Ensembl
RGD
UniProt
PMID:12738229 PMID:18411297 PMID:19605937 PMID:20106950 PMID:20430893 PMID:23785138 PMID:30012868, PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:4410413 MGI:4820700 MGI:4837055 MGI:5553247 MGI:6282958, RGD:13792537 NCBI chr14:34,418,226...34,502,218
Ensembl chr14:34,446,616...34,502,218
JBrowse link
G Cry1 cryptochrome circadian regulator 1 enables ISO (MGI:5009503|PMID:19129230), (MGI:5292598|PMID:21768648), (MGI:5464222|PMID:23133559), (MGI:5545849|PMID:24385426) RGD PMID:19129230 PMID:21768648 PMID:23133559 PMID:24385426 MGI:5009503 MGI:5292598 MGI:5464222 MGI:5545849 NCBI chr 7:24,534,593...24,634,098
Ensembl chr 7:24,534,615...24,634,097
JBrowse link
G Gata3 GATA binding protein 3 enables ISO
ISS
(PMID:20855495)
GO_REF:0000024
RGD
UniProt
PMID:20855495 GO_REF:0000024 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 contributes_to
enables
ISO
IEA
(MGI:4362015|PMID:11812799)
(MGI:4453274|PMID:20144608)
GO_REF:0000107
(PMID:15486975)
RGD
Ensembl
PMID:11812799 PMID:15486975 PMID:20144608 GO_REF:0000107 MGI:4362015 MGI:4453274 NCBI chr16:36,371,489...36,373,551
Ensembl chr16:36,371,489...36,373,546
JBrowse link
G Hdac1 histone deacetylase 1 enables ISO (MGI:5568140|PMID:24736997) RGD PMID:24736997 MGI:5568140 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723
JBrowse link
G Hes1 hes family bHLH transcription factor 1 enables IDA
ISO
IBA
IEA
(MGI:1859234|PMID:10851137)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:10851137, PMID:19670267, PMID:21873635 GO_REF:0000107 MGI:1859234, RGD:9685170, RGD:13792537 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hes3 hes family bHLH transcription factor 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:169,463,196...169,469,795
Ensembl chr 5:169,464,989...169,467,153
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha enables IEA
ISO
GO_REF:0000107
(MGI:5528778|PMID:24011070)
Ensembl
RGD
PMID:24011070 GO_REF:0000107 MGI:5528778 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Max MYC associated factor X enables ISO (PMID:16171389) RGD PMID:16171389 NCBI chr 6:99,984,260...100,011,460
Ensembl chr 6:99,984,260...100,011,388
JBrowse link
G Mitf melanocyte inducing transcription factor enables ISS
ISO
GO_REF:0000024
(MGI:5461240|PMID:23207919)
(PMID:27889061)
UniProt
RGD
PMID:23207919 PMID:27889061 GO_REF:0000024 MGI:5461240 NCBI chr 4:130,172,484...130,425,496
Ensembl chr 4:130,172,727...130,425,532
JBrowse link
G Mybbp1a MYB binding protein 1a enables ISO UniProtKB:O08785|UniProtKB:P97784 (MGI:5009503|PMID:19129230) RGD PMID:19129230 MGI:5009503 NCBI chr10:59,000,400...59,010,794
Ensembl chr10:59,000,397...59,010,903
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor enables ISS
ISO
GO_REF:0000024
(PMID:19545562)
(PMID:18818310)
UniProt
RGD
PMID:18818310 PMID:19545562 GO_REF:0000024 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Myod1 myogenic differentiation 1 enables IDA
ISO
ISS
IEA
(MGI:1934945|PMID:10652346), (MGI:5508271|PMID:15706034)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:10652346 PMID:15706034, PMID:11600477 GO_REF:0000024 GO_REF:0000107 MGI:1934945 MGI:5508271, RGD:9686083 NCBI chr 1:102,396,538...102,399,248
Ensembl chr 1:102,396,538...102,399,248
JBrowse link
G Myog myogenin enables ISS
ISO
GO_REF:0000024
(MGI:5009475|PMID:19783823), (MGI:5508271|PMID:15706034), (MGI:5526919|PMID:22847234)
UniProt
RGD
PMID:15706034 PMID:19783823 PMID:22847234 GO_REF:0000024 MGI:5009475 MGI:5508271 MGI:5526919 NCBI chr13:51,126,459...51,129,048
Ensembl chr13:51,126,459...51,129,048
JBrowse link
G Neurod1 neuronal differentiation 1 enables ISO (PMID:14752053)
(MGI:2686763|PMID:14697366)
RGD PMID:14697366 PMID:14752053 MGI:2686763 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741
JBrowse link
G Neurod2 neuronal differentiation 2 enables ISS
ISO
GO_REF:0000024
(MGI:2686763|PMID:14697366), (MGI:3789797|PMID:18214987)
UniProt
RGD
PMID:14697366 PMID:18214987 GO_REF:0000024 MGI:2686763 MGI:3789797 NCBI chr10:86,280,865...86,282,681
Ensembl chr10:86,280,892...86,282,693
JBrowse link
G Neurog1 neurogenin 1 enables ISS
ISO
GO_REF:0000024
(MGI:2686763|PMID:14697366)
(PMID:20102160)
UniProt
RGD
PMID:14697366 PMID:20102160 GO_REF:0000024 MGI:2686763 NCBI chr17:9,154,656...9,156,175
Ensembl chr17:9,154,656...9,156,175
JBrowse link
G Neurog2 neurogenin 2 enables ISO (MGI:2686763|PMID:14697366) RGD PMID:14697366 MGI:2686763 NCBI chr 2:231,962,517...231,963,441
Ensembl chr 2:231,962,517...231,963,308
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 enables ISS
ISO
IEA
GO_REF:0000024
(MGI:3819720|PMID:18565334)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:18565334 GO_REF:0000024 GO_REF:0000107 MGI:3819720 NCBI chr10:86,683,875...86,690,815
Ensembl chr10:86,683,875...86,690,815
JBrowse link
G Per1 period circadian regulator 1 enables ISO
IEA
(PMID:18411297)
GO_REF:0000107
RGD
Ensembl
PMID:18411297 GO_REF:0000107 NCBI chr10:55,681,761...55,696,557
Ensembl chr10:55,687,050...55,695,994
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma enables ISS
ISO
GO_REF:0000024
(MGI:3830801|PMID:19041764)
UniProt
RGD
PMID:19041764 GO_REF:0000024 MGI:3830801 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Prmt5 protein arginine methyltransferase 5 enables ISO (MGI:5464222|PMID:23133559) RGD PMID:23133559 MGI:5464222 NCBI chr15:33,156,508...33,165,893
Ensembl chr15:33,156,492...33,165,895
JBrowse link
G Ptf1a pancreas associated transcription factor 1a enables ISO (MGI:5319131|PMID:22232429) RGD PMID:22232429 MGI:5319131 NCBI chr17:86,199,623...86,201,477
Ensembl chr17:86,199,623...86,201,477
JBrowse link
G Scx scleraxis bHLH transcription factor contributes_to
enables
ISO (PMID:10775504)
(MGI:4418577|PMID:20059955), (MGI:72077|PMID:7743923)
(MGI:5294531|PMID:19828133)
RGD PMID:7743923 PMID:10775504 PMID:19828133 PMID:20059955 MGI:4418577 MGI:5294531 MGI:72077 NCBI chr 7:117,519,075...117,521,093
Ensembl chr 7:117,519,075...117,521,093
JBrowse link
G Snai1 snail family transcriptional repressor 1 enables ISO (PMID:11912130) RGD PMID:11912130 NCBI chr 3:164,274,710...164,279,199
Ensembl chr 3:164,274,710...164,279,378
JBrowse link
G Snai2 snail family transcriptional repressor 2 enables ISO (PMID:11912130) RGD PMID:11912130 NCBI chr11:90,404,421...90,406,730
Ensembl chr11:90,403,333...90,406,797
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 enables IEA
ISO
GO_REF:0000107
(PMID:15358760)
Ensembl
RGD
PMID:15358760 GO_REF:0000107 NCBI chr 7:123,381,082...123,438,605
Ensembl chr 7:123,381,077...123,438,603
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor enables ISO (PMID:20855495)
(MGI:3807430|PMID:18550854)
RGD PMID:18550854 PMID:20855495 MGI:3807430 NCBI chr 5:133,864,401...133,878,604
Ensembl chr 5:133,864,798...133,878,830
JBrowse link
G Tcf12 transcription factor 12 enables ISS
ISO
GO_REF:0000024
(MGI:3789797|PMID:18214987)
UniProt
RGD
PMID:18214987 GO_REF:0000024 MGI:3789797 NCBI chr 8:78,343,634...78,657,738
Ensembl chr 8:78,345,754...78,655,856
JBrowse link
G Tcf15 transcription factor 15 enables IEA
ISO
GO_REF:0000107
(MGI:6508495|PMID:15226298)
Ensembl
RGD
PMID:15226298 GO_REF:0000107 MGI:6508495 NCBI chr 3:147,643,250...147,649,511
Ensembl chr 3:147,643,250...147,649,504
JBrowse link
G Tcf21 transcription factor 21 enables ISS
ISO
GO_REF:0000024
(MGI:3588448|PMID:15919722)
UniProt
RGD
PMID:15919722 GO_REF:0000024 MGI:3588448 NCBI chr 1:23,906,717...23,909,576
Ensembl chr 1:23,906,717...23,909,566
JBrowse link
G Tcf3 transcription factor 3 contributes_to
enables
IDA
IEA
ISO
ISS
PMID:19828133
GO_REF:0000107
(MGI:3789797|PMID:18214987), (MGI:6508495|PMID:15226298)
(MGI:4362015|PMID:11812799)
(PMID:10652346), (PMID:7933101)
GO_REF:0000024
(PMID:10775504)
Ensembl
RGD
UniProt
PMID:7933101 PMID:10652346 PMID:10775504 PMID:11812799 PMID:15226298 PMID:18214987, PMID:19828133 GO_REF:0000024 GO_REF:0000107 MGI:3789797 MGI:4362015 MGI:6508495, RGD:8553796 NCBI chr 7:12,146,642...12,168,400
Ensembl chr 7:12,144,162...12,168,410
JBrowse link
G Tcf4 transcription factor 4 enables ISS
ISO
GO_REF:0000024
(MGI:3789797|PMID:18214987), (MGI:85411|PMID:8978694)
UniProt
RGD
PMID:8978694 PMID:18214987 GO_REF:0000024 MGI:3789797 MGI:85411 NCBI chr18:65,285,320...65,507,983
Ensembl chr18:65,155,685...65,507,977
JBrowse link
G Tfap4 transcription factor AP-4 enables ISO (PMID:11171123), (PMID:12663744), (PMID:18818310), (PMID:19505873), (PMID:7933101)
(MGI:4456960|PMID:11171123)
RGD PMID:7933101 PMID:11171123 PMID:12663744 PMID:18818310 PMID:19505873 MGI:4456960 NCBI chr10:11,204,616...11,222,975
Ensembl chr10:11,206,226...11,223,370
JBrowse link
G Twist1 twist family bHLH transcription factor 1 enables ISO (PMID:17332325), (PMID:20804746)
(MGI:3623529|PMID:16502419), (MGI:4838344|PMID:20804746), (MGI:5528778|PMID:24011070)
RGD PMID:16502419 PMID:17332325 PMID:20804746 PMID:24011070 MGI:3623529 MGI:4838344 MGI:5528778 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 enables IEA
ISO
ISS
GO_REF:0000107
(MGI:4830798|PMID:20346398)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20346398 GO_REF:0000024 GO_REF:0000107 MGI:4830798 NCBI chr17:54,656,627...54,714,920
Ensembl chr17:54,658,463...54,714,914
JBrowse link
estrogen response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esr1 estrogen receptor 1 enables ISO
IEA
(PMID:15345745), (PMID:15831516), (PMID:17975005), (PMID:9841876)
GO_REF:0000107
RGD
Ensembl
PMID:9841876 PMID:15345745 PMID:15831516 PMID:17975005 GO_REF:0000107 NCBI chr 1:41,192,029...41,594,799
Ensembl chr 1:41,192,824...41,594,796
JBrowse link
G Esr2 estrogen receptor 2 enables IDA
IEA
ISO
GO_REF:0000107
(PMID:15345745), (PMID:19126643)
(PMID:24033289)
Ensembl
RGD
PMID:15345745 PMID:19126643 PMID:24033289, PMID:9600083 GO_REF:0000107, RGD:728646 NCBI chr 6:99,163,953...99,214,711
Ensembl chr 6:99,164,357...99,214,251
JBrowse link
G Trim24 tripartite motif-containing 24 enables ISO (PMID:21164480) RGD PMID:21164480 NCBI chr 4:65,632,278...65,684,746
Ensembl chr 4:65,637,407...65,684,743
JBrowse link
G-rich strand telomeric DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctc1 CST telomere replication complex component 1 enables ISO (PMID:22763445) RGD PMID:22763445 NCBI chr10:55,596,172...55,616,873
Ensembl chr10:55,596,148...55,616,889
JBrowse link
G