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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of RNA stability
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Accession:GO:0043487 term browser browse the term
Definition:Any process that modulates the propensity of RNA molecules to degradation. Includes processes that both stabilize and destabilize RNAs.



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regulation of RNA stability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLRP5 NLR family pyrin domain containing 5 acts_upstream_of_or_within ISO (MGI:1926689|PMID:11062459) MGI PMID:11062459 MGI:1926689 NCBI chr19:55,999,726...56,061,810
Ensembl chr19:55,999,726...56,061,810
JBrowse link
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in IDA (PMID:21336257) UniProt PMID:21336257 NCBI chr10:92,046,692...92,291,233
Ensembl chr10:92,046,692...92,291,078
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IMP (PMID:26489465) UniProt PMID:26489465 NCBI chr 3:154,272,546...154,324,487
Ensembl chr 3:154,272,546...154,324,487
JBrowse link
G DND1 DND microRNA-mediated repression inhibitor 1 involved_in IDA (PMID:28297718) CACAO PMID:28297718 NCBI chr 5:140,670,794...140,673,576
Ensembl chr 5:140,670,794...140,673,576
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in ISO
IEA
RGD
Ensembl
PMID:20805360 GO_REF:0000107 RGD:10042974 NCBI chr 4:82,352,498...82,373,991
Ensembl chr 4:82,352,498...82,374,503
JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in IMP
IDA
(PMID:28275056)
(PMID:16126846)
CACAO
UniProt
PMID:16126846 PMID:28275056 NCBI chr19:6,413,102...6,424,811
Ensembl chr19:6,413,102...6,424,811
JBrowse link
G MOV10 Mov10 RNA helicase involved_in IDA (PMID:24726324) UniProt PMID:24726324 NCBI chr 1:112,674,439...112,700,739
Ensembl chr 1:112,673,141...112,700,756
JBrowse link
G PLEKHN1 pleckstrin homology domain containing N1 involved_in IDA
IEA
IBA
(PMID:29180010) UniProt
TreeGrafter
GO_Central
PMID:29180010 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:966,482...975,865
Ensembl chr 1:966,482...975,865
JBrowse link
G PUM1 pumilio RNA binding family member 1 involved_in TAS (PMID:31048766) ARUK-UCL PMID:31048766 NCBI chr 1:30,931,506...31,065,717
Ensembl chr 1:30,931,506...31,065,991
JBrowse link
G PUM2 pumilio RNA binding family member 2 involved_in TAS (PMID:31048766) ARUK-UCL PMID:31048766 NCBI chr 2:20,248,691...20,352,253
Ensembl chr 2:20,248,691...20,352,234
JBrowse link
G QKI QKI, KH domain containing RNA binding acts_upstream_of_or_within ISO (MGI:5316962|PMID:20631256) MGI PMID:20631256 MGI:5316962 NCBI chr 6:163,414,718...163,578,592
Ensembl chr 6:163,414,000...163,578,592
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in IDA (PMID:24375645) UniProt PMID:24375645 NCBI chr 6:17,281,361...17,293,871
Ensembl chr 6:17,281,361...17,293,871
JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:173,931,084...174,022,357
Ensembl chr 1:173,931,084...174,022,357
JBrowse link
G TARDBP TAR DNA binding protein involved_in IDA (PMID:28335005) CACAO PMID:28335005 NCBI chr 1:11,012,654...11,030,528
Ensembl chr 1:11,012,344...11,030,528
JBrowse link
G TRIM71 tripartite motif containing 71 involved_in IDA (PMID:23125361) CACAO PMID:23125361 NCBI chr 3:32,817,997...32,897,824
Ensembl chr 3:32,817,997...32,897,824
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IDA
TAS
(PMID:24726324)
(PMID:26255671)
UniProt PMID:24726324 PMID:26255671 NCBI chr19:18,831,959...18,868,230
Ensembl chr19:18,831,959...18,868,230
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IDA
IBA
IEA
ISS
(PMID:19909337) UniProt
GO_Central
TreeGrafter
Ensembl
PMID:19909337 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:37,474,580...37,484,377
Ensembl chr 1:37,474,580...37,484,377
JBrowse link
G ZC3H12D zinc finger CCCH-type containing 12D involved_in ISS
IBA
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000033 NCBI chr 6:149,446,795...149,485,014
Ensembl chr 6:149,446,795...149,485,014
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA
IMP
IDA
(PMID:14679154), (PMID:15187101), (PMID:15634918), (PMID:15766526)
(PMID:11719186), (PMID:15687258), (PMID:20221403), (PMID:27193233), (PMID:9703499)
Ensembl
UniProt
PMID:9703499 PMID:11719186 PMID:14679154 PMID:15187101 PMID:15634918 More... GO_REF:0000104 GO_REF:0000107 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA
IDA
IMP
(PMID:15467755), (PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:24700863), (PMID:26542173)
(PMID:12198173), (PMID:25014217), (PMID:25106868)
Ensembl
UniProt
PMID:12198173 PMID:15467755 PMID:15538381 PMID:15687258 PMID:18326031 More... GO_REF:0000104 GO_REF:0000107 NCBI chr14:68,787,655...68,796,243
Ensembl chr14:68,787,660...68,796,253
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in ISS
IEA
IMP
(PMID:25106868) UniProt
Ensembl
PMID:25106868 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:43,222,402...43,226,606
Ensembl chr 2:43,222,402...43,226,606
JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGEL2 angel homolog 2 involved_in IMP
IBA
IEA
(PMID:22547059) HGNC
GO_Central
TreeGrafter
PMID:22547059 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:212,992,182...213,015,867
Ensembl chr 1:212,992,182...213,015,867
JBrowse link
G BOLL boule homolog, RNA binding protein involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 2:197,726,890...197,786,206
Ensembl chr 2:197,726,879...197,786,762
JBrowse link
G DAZ1 deleted in azoospermia 1 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr  Y:23,129,355...23,199,094
Ensembl chr  Y:23,129,355...23,199,010
JBrowse link
G DAZ2 deleted in azoospermia 2 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr  Y:23,219,457...23,291,356
Ensembl chr  Y:23,219,447...23,291,356
JBrowse link
G DAZ3 deleted in azoospermia 3 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr  Y:24,763,069...24,813,393
Ensembl chr  Y:24,763,069...24,813,492
JBrowse link
G DAZ4 deleted in azoospermia 4 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr  Y:24,833,820...24,907,040
Ensembl chr  Y:24,833,843...24,907,040
JBrowse link
G DAZL deleted in azoospermia like involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 3:16,586,792...16,605,423
Ensembl chr 3:16,586,792...16,670,306
JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 involved_in IEA
IDA
IMP
(PMID:14517288), (PMID:26489465), (PMID:29180010)
(PMID:19029303)
Ensembl
UniProt
PMID:14517288 PMID:19029303 PMID:26489465 PMID:29180010 GO_REF:0000107 NCBI chr19:7,958,573...8,005,641
Ensembl chr19:7,958,573...8,005,659
JBrowse link
G ELAVL4 ELAV like RNA binding protein 4 involved_in IDA (PMID:12034726) UniProt PMID:12034726 NCBI chr 1:50,048,055...50,203,772
Ensembl chr 1:50,024,029...50,203,772
JBrowse link
G HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 involved_in IEA
IBA
TAS
ISS
(PMID:20932473) Ensembl
GO_Central
UniProt
PMID:20932473 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:137,745,651...137,754,363
Ensembl chr 5:137,745,651...137,754,363
JBrowse link
G HNRNPC heterogeneous nuclear ribonucleoprotein C involved_in IMP (PMID:16010978) UniProt PMID:16010978 NCBI chr14:21,209,147...21,269,442
Ensembl chr14:21,209,136...21,269,494
JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in TAS (PMID:20932473) UniProt PMID:20932473 NCBI chr 6:36,027,808...36,124,214
Ensembl chr 6:36,027,782...36,111,236
JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 involved_in IDA (PMID:14517288), (PMID:15014438), (PMID:20932473) UniProt PMID:14517288 PMID:15014438 PMID:20932473 NCBI chr 1:206,684,905...206,734,281
Ensembl chr 1:206,684,905...206,734,281
JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor involved_in IDA (PMID:15294994) BHF-UCL PMID:15294994 NCBI chr 3:38,138,661...38,143,022
Ensembl chr 3:38,138,552...38,143,024
JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 ISO RGD PMID:11696543 RGD:10045987 NCBI chr19:797,452...812,312
Ensembl chr19:797,075...812,327
JBrowse link
G RBM10 RNA binding motif protein 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4367529|PMID:19508861) MGI
Ensembl
PMID:19508861 GO_REF:0000107 MGI:4367529 NCBI chr  X:47,145,221...47,186,813
Ensembl chr  X:47,145,221...47,186,813
JBrowse link
G RBM38 RNA binding motif protein 38 involved_in IDA (PMID:17050675) UniProt PMID:17050675 NCBI chr20:57,391,396...57,409,333
Ensembl chr20:57,391,396...57,409,333
JBrowse link
G RBM47 RNA binding motif protein 47 involved_in IDA
IEA
(PMID:34160127) UniProt
Ensembl
PMID:34160127 GO_REF:0000107 NCBI chr 4:40,423,280...40,630,852
Ensembl chr 4:40,423,267...40,630,875
JBrowse link
G TARDBP TAR DNA binding protein involved_in IDA (PMID:17481916) BHF-UCL PMID:17481916 NCBI chr 1:11,012,654...11,030,528
Ensembl chr 1:11,012,344...11,030,528
JBrowse link
G TIRAP TIR domain containing adaptor protein involved_in IDA (PMID:15294994) BHF-UCL PMID:15294994 NCBI chr11:126,283,093...126,294,933
Ensembl chr11:126,282,497...126,298,845
JBrowse link
G YBX3 Y-box binding protein 3 involved_in IC (PMID:22711822) BHF-UCL PMID:22711822 NCBI chr12:10,699,089...10,723,323
Ensembl chr12:10,699,089...10,723,323
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IDA (PMID:15014438) UniProt PMID:15014438 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412
JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSDE1 cold shock domain containing E1 involved_in IDA (PMID:11051545) ComplexPortal PMID:11051545 NCBI chr 1:114,716,916...114,757,984
Ensembl chr 1:114,716,913...114,758,676
JBrowse link
G DHX9 DExH-box helicase 9 involved_in IDA
IMP
(PMID:19029303) ComplexPortal
UniProt
PMID:19029303 NCBI chr 1:182,839,347...182,887,982
Ensembl chr 1:182,839,347...182,887,982
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IDA (PMID:11051545) ComplexPortal PMID:11051545 NCBI chr 4:82,352,498...82,373,991
Ensembl chr 4:82,352,498...82,374,503
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IMP
IEA
IDA
(PMID:19029303) UniProt
TreeGrafter
ComplexPortal
PMID:19029303 GO_REF:0000118 NCBI chr 1:244,850,297...244,864,543
Ensembl chr 1:244,840,638...244,864,560
JBrowse link
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 involved_in IDA (PMID:19029303), (PMID:29476152) UniProt PMID:19029303 PMID:29476152 NCBI chr17:48,996,558...49,056,145
Ensembl chr17:48,997,385...49,056,145
JBrowse link
G IGF2BP2 insulin like growth factor 2 mRNA binding protein 2 involved_in IDA (PMID:29476152) UniProt PMID:29476152 NCBI chr 3:185,643,130...185,825,042
Ensembl chr 3:185,643,130...185,825,042
JBrowse link
G IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 involved_in IDA (PMID:29476152) UniProt PMID:29476152 NCBI chr 7:23,310,209...23,470,491
Ensembl chr 7:23,310,209...23,470,491
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in IDA (PMID:11051545) ComplexPortal PMID:11051545 NCBI chr 8:100,702,916...100,722,088
Ensembl chr 8:100,685,816...100,722,809
JBrowse link
G PAIP1 poly(A) binding protein interacting protein 1 involved_in IDA (PMID:11051545) ComplexPortal PMID:11051545 NCBI chr 5:43,526,267...43,557,411
Ensembl chr 5:43,526,267...43,557,758
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein involved_in IMP
IBA
IEA
IDA
(PMID:19029303)
(PMID:11051545), (PMID:19029303)
UniProt
GO_Central
TreeGrafter
ComplexPortal
PMID:11051545 PMID:19029303 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:85,607,784...85,643,870
Ensembl chr 6:85,607,779...85,644,063
JBrowse link
G YBX1 Y-box binding protein 1 involved_in IMP
IDA
(PMID:19029303) UniProt
ComplexPortal
PMID:19029303 NCBI chr 1:42,682,418...42,703,805
Ensembl chr 1:42,682,418...42,703,805
JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT7 CCR4-NOT transcription complex subunit 7 acts_upstream_of_or_within
involved_in
ISO
IDA
IEA
(MGI:3807625|PMID:18625844)
(PMID:31439799)
MGI
UniProt
Ensembl
PMID:18625844 PMID:31439799 GO_REF:0000107 MGI:3807625 NCBI chr 8:17,224,966...17,246,857
Ensembl chr 8:17,224,966...17,246,878
JBrowse link
G DCP1A decapping mRNA 1A involved_in IEA
IBA
InterPro
TreeGrafter
GO_Central
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:53,283,429...53,347,543
Ensembl chr 3:53,283,429...53,347,586
JBrowse link
G DCP1B decapping mRNA 1B involved_in IEA
IBA
InterPro
GO_Central
TreeGrafter
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr12:1,941,591...2,004,457
Ensembl chr12:1,946,053...2,004,535
JBrowse link
G DCP2 decapping mRNA 2 involved_in IEA
IBA
InterPro
TreeGrafter
GO_Central
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:112,976,798...113,022,195
Ensembl chr 5:112,976,702...113,022,195
JBrowse link
G DCPS decapping enzyme, scavenger involved_in IEA
IBA
UniProt
TreeGrafter
GO_Central
InterPro
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr11:126,304,060...126,350,005
Ensembl chr11:126,304,060...126,350,005
JBrowse link
G LSM1 LSM1 homolog, mRNA degradation associated involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 8:38,163,321...38,176,730
Ensembl chr 8:38,163,335...38,176,730
JBrowse link
G NOCT nocturnin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3807625|PMID:18625844) MGI
Ensembl
PMID:18625844 GO_REF:0000107 MGI:3807625 NCBI chr 4:139,015,781...139,045,939
Ensembl chr 4:139,015,781...139,045,939
JBrowse link
G PAN3 poly(A) specific ribonuclease subunit PAN3 acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr13:28,138,193...28,295,335
Ensembl chr13:28,138,506...28,295,335
JBrowse link
G PATL1 PAT1 homolog 1, processing body mRNA decay factor involved_in IDA
IEA
IBA
(PMID:20584987), (PMID:20852261) UniProt
TreeGrafter
GO_Central
InterPro
PMID:20584987 PMID:20852261 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr11:59,636,716...59,669,037
Ensembl chr11:59,636,716...59,669,037
JBrowse link
G PATL2 PAT1 homolog 2 involved_in IEA
IBA
InterPro
GO_Central
TreeGrafter
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr15:44,665,732...44,711,390
Ensembl chr15:44,665,732...44,711,323
JBrowse link
exonucleolytic catabolism of deadenylated mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT6 CCR4-NOT transcription complex subunit 6 involved_in IDA (PMID:20065043) UniProt PMID:20065043 NCBI chr 5:180,494,379...180,578,358
Ensembl chr 5:180,494,379...180,578,358
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IDA
IEA
IBA
(PMID:20065043), (PMID:21336257) UniProt
TreeGrafter
GO_Central
PMID:20065043 PMID:21336257 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:17,224,966...17,246,857
Ensembl chr 8:17,224,966...17,246,878
JBrowse link
G CNOT8 CCR4-NOT transcription complex subunit 8 involved_in IDA
IEA
IBA
(PMID:20065043) UniProt
TreeGrafter
GO_Central
PMID:20065043 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:154,858,249...154,876,792
Ensembl chr 5:154,857,553...154,876,792
JBrowse link
G DCP2 decapping mRNA 2 involved_in TAS Reactome Reactome:R-HSA-430039 NCBI chr 5:112,976,798...113,022,195
Ensembl chr 5:112,976,702...113,022,195
JBrowse link
G DCPS decapping enzyme, scavenger involved_in TAS Reactome Reactome:R-HSA-429958 NCBI chr11:126,304,060...126,350,005
Ensembl chr11:126,304,060...126,350,005
JBrowse link
G DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease involved_in TAS Reactome Reactome:R-HSA-429958 NCBI chr13:72,752,169...72,781,900
Ensembl chr13:72,752,169...72,782,096
JBrowse link
G EXOSC2 exosome component 2 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 9:130,693,760...130,704,894
Ensembl chr 9:130,693,721...130,707,288
JBrowse link
G EXOSC3 exosome component 3 involved_in IMP
IEA
IBA
(PMID:11782436) UniProt
TreeGrafter
GO_Central
PMID:11782436 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:37,779,714...37,785,092
Ensembl chr 9:37,759,234...37,832,117
JBrowse link
G EXOSC5 exosome component 5 involved_in IMP (PMID:11782436) UniProt PMID:11782436 NCBI chr19:41,386,374...41,397,359
Ensembl chr19:41,386,371...41,397,362
JBrowse link
G EXOSC7 exosome component 7 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 3:44,976,244...45,012,668
Ensembl chr 3:44,975,241...45,036,066
JBrowse link
G EXOSC8 exosome component 8 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr13:37,000,786...37,009,614
Ensembl chr13:36,998,816...37,025,881
JBrowse link
G EXOSC9 exosome component 9 involved_in IMP
IBA
IEA
(PMID:11782436) UniProt
GO_Central
TreeGrafter
PMID:11782436 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:121,801,323...121,817,021
Ensembl chr 4:121,801,318...121,817,021
JBrowse link
G NT5C3B 5'-nucleotidase, cytosolic IIIB involved_in TAS Reactome Reactome:R-HSA-429958 NCBI chr17:41,825,057...41,836,232
Ensembl chr17:41,825,057...41,836,260
JBrowse link
miRNA-mediated gene silencing by mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 NOT|involved_in IDA (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 1:35,869,761...35,930,532
Ensembl chr 1:35,869,808...35,930,532
JBrowse link
G AGO2 argonaute RISC catalytic component 2 involved_in IMP
IEA
IDA
(PMID:18771919)
(PMID:15260970), (PMID:17524464)
UniProt
BHF-UCL
Ensembl
PMID:15260970 PMID:17524464 PMID:18771919 GO_REF:0000104 GO_REF:0000107 NCBI chr 8:140,520,156...140,642,313
Ensembl chr 8:140,520,156...140,635,633
JBrowse link
G AGO3 argonaute RISC catalytic component 3 NOT|involved_in IDA
IEA
(PMID:15260970) BHF-UCL
GOC
PMID:15260970 GO_REF:0000108 NCBI chr 1:35,930,718...36,072,500
Ensembl chr 1:35,930,718...36,072,500
JBrowse link
G AGO4 argonaute RISC component 4 NOT|involved_in IDA (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 1:35,807,636...35,857,890
Ensembl chr 1:35,808,016...35,857,890
JBrowse link
G MIR1-1 microRNA 1-1 involved_in IDA (PMID:23499676), (PMID:25802280) BHF-UCL PMID:23499676 PMID:25802280 NCBI chr20:62,554,306...62,554,376
Ensembl chr20:62,554,306...62,554,376
JBrowse link
G MIR1-2 microRNA 1-2 involved_in IDA (PMID:23499676), (PMID:25802280) BHF-UCL PMID:23499676 PMID:25802280 NCBI chr18:21,829,004...21,829,088
Ensembl chr18:21,829,004...21,829,088
JBrowse link
G MIR100 microRNA 100 involved_in IDA (PMID:22684006) BHF-UCL PMID:22684006 NCBI chr11:122,152,229...122,152,308
Ensembl chr11:122,152,229...122,152,308
JBrowse link
G MIR103B1 microRNA 103b-1 involved_in IDA (PMID:34086556) BHF-UCL PMID:34086556 NCBI chr 5:168,560,904...168,560,965
Ensembl chr 5:168,560,904...168,560,965
JBrowse link
G MIR103B2 microRNA 103b-2 involved_in IDA (PMID:34086556) BHF-UCL PMID:34086556 NCBI chr20:3,917,502...3,917,563
Ensembl chr20:3,917,502...3,917,563
JBrowse link
G MIR106A microRNA 106a involved_in IDA (PMID:22912877), (PMID:26265888), (PMID:27325313) BHF-UCL PMID:22912877 PMID:26265888 PMID:27325313 NCBI chr  X:134,170,198...134,170,278
Ensembl chr  X:134,170,198...134,170,278
JBrowse link
G MIR106B microRNA 106b involved_in IDA (PMID:27325313) BHF-UCL PMID:27325313 NCBI chr 7:100,093,993...100,094,074
Ensembl chr 7:100,093,993...100,094,074
JBrowse link
G MIR125A microRNA 125a involved_in IDA (PMID:30670152) ARUK-UCL PMID:30670152 NCBI chr19:51,693,254...51,693,339
Ensembl chr19:51,693,254...51,693,339
JBrowse link
G MIR125B1 microRNA 125b-1 involved_in IDA (PMID:28214897) BHF-UCL PMID:28214897 NCBI chr11:122,099,757...122,099,844
Ensembl chr11:122,099,757...122,099,844
JBrowse link
G MIR125B2 microRNA 125b-2 involved_in IDA (PMID:28214897) BHF-UCL PMID:28214897 NCBI chr21:16,590,237...16,590,325
Ensembl chr21:16,590,237...16,590,325
JBrowse link
G MIR128-1 microRNA 128-1 involved_in IDA (PMID:33058756) BHF-UCL PMID:33058756 NCBI chr 2:135,665,397...135,665,478
Ensembl chr 2:135,665,397...135,665,478
JBrowse link
G MIR128-2 microRNA 128-2 involved_in IDA (PMID:33058756) BHF-UCL PMID:33058756 NCBI chr 3:35,744,476...35,744,559
Ensembl chr 3:35,744,476...35,744,559
JBrowse link
G MIR130A microRNA 130a involved_in IDA (PMID:30741461) BHF-UCL PMID:30741461 NCBI chr11:57,641,198...57,641,286
Ensembl chr11:57,641,198...57,641,286
JBrowse link
G MIR130B microRNA 130b involved_in IDA (PMID:24040078) BHF-UCL PMID:24040078 NCBI chr22:21,653,304...21,653,385
Ensembl chr22:21,653,304...21,653,385
JBrowse link
G MIR133A1 microRNA 133a-1 involved_in IDA (PMID:32205184) ARUK-UCL PMID:32205184 NCBI chr18:21,825,698...21,825,785
Ensembl chr18:21,825,698...21,825,785
JBrowse link
G MIR133A2 microRNA 133a-2 involved_in IDA (PMID:32205184) ARUK-UCL PMID:32205184 NCBI chr20:62,564,912...62,565,013
Ensembl chr20:62,564,912...62,565,013
JBrowse link
G MIR135B microRNA 135b involved_in IDA (PMID:27793001) BHF-UCL PMID:27793001 NCBI chr 1:205,448,302...205,448,398
Ensembl chr 1:205,448,302...205,448,398
JBrowse link
G MIR137 microRNA 137 involved_in IDA (PMID:23275153) BHF-UCL PMID:23275153 NCBI chr 1:98,046,070...98,046,171
Ensembl chr 1:98,046,070...98,046,171
JBrowse link
G MIR140 microRNA 140 involved_in IDA (PMID:24928442) BHF-UCL PMID:24928442 NCBI chr16:69,933,081...69,933,180
Ensembl chr16:69,933,081...69,933,180
JBrowse link
G MIR142 microRNA 142 involved_in IDA (PMID:24558198), (PMID:26572508), (PMID:31168355) BHF-UCL PMID:24558198 PMID:26572508 PMID:31168355 NCBI chr17:58,331,232...58,331,318
Ensembl chr17:58,331,232...58,331,318
JBrowse link
G MIR145 microRNA 145 involved_in IDA
IMP
(PMID:25323858), (PMID:29883722)
(PMID:25704091)
BHF-UCL PMID:25323858 PMID:25704091 PMID:29883722 NCBI chr 5:149,430,646...149,430,733
Ensembl chr 5:149,430,646...149,430,733
JBrowse link
G MIR146A microRNA 146a involved_in IDA (PMID:30779466) BHF-UCL PMID:30779466 NCBI chr 5:160,485,352...160,485,450
Ensembl chr 5:160,485,352...160,485,450
JBrowse link
G MIR149 microRNA 149 involved_in IDA (PMID:28260877) ARUK-UCL PMID:28260877 NCBI chr 2:240,456,001...240,456,089
Ensembl chr 2:240,456,001...240,456,089
JBrowse link
G MIR151A microRNA 151a involved_in IDA (PMID:20305651) BHF-UCL PMID:20305651 NCBI chr 8:140,732,564...140,732,653
Ensembl chr 8:140,732,564...140,732,653
JBrowse link
G MIR16-1 microRNA 16-1 involved_in IDA (PMID:24418124) ARUK-UCL PMID:24418124 NCBI chr13:50,048,973...50,049,061
Ensembl chr13:50,048,973...50,049,061
JBrowse link
G MIR16-2 microRNA 16-2 involved_in IDA (PMID:24418124) ARUK-UCL PMID:24418124 NCBI chr 3:160,404,745...160,404,825
Ensembl chr 3:160,404,745...160,404,825
JBrowse link
G MIR181A1 microRNA 181a-1 involved_in IMP
IDA
(PMID:22714950)
(PMID:25535255)
BHF-UCL
ARUK-UCL
PMID:22714950 PMID:25535255 NCBI chr 1:198,859,044...198,859,153
Ensembl chr 1:198,859,044...198,859,153
JBrowse link
G MIR181A2 microRNA 181a-2 involved_in IMP
IDA
(PMID:22714950)
(PMID:25535255)
BHF-UCL
ARUK-UCL
PMID:22714950 PMID:25535255 NCBI chr 9:124,692,442...124,692,551
Ensembl chr 9:124,692,442...124,692,551
JBrowse link
G MIR181B1 microRNA 181b-1 involved_in IDA (PMID:25535255) ARUK-UCL PMID:25535255 NCBI chr 1:198,858,873...198,858,982
Ensembl chr 1:198,858,873...198,858,982
JBrowse link
G MIR181B2 microRNA 181b-2 involved_in IDA (PMID:25535255) ARUK-UCL PMID:25535255 NCBI chr 9:124,693,710...124,693,798
Ensembl chr 9:124,693,710...124,693,798
JBrowse link
G MIR181C microRNA 181c involved_in IDA (PMID:25535255) ARUK-UCL PMID:25535255 NCBI chr19:13,874,699...13,874,808
Ensembl chr19:13,874,699...13,874,808
JBrowse link
G MIR181D microRNA 181d involved_in IDA (PMID:25535255) ARUK-UCL PMID:25535255 NCBI chr19:13,874,875...13,875,011
Ensembl chr19:13,874,875...13,875,011
JBrowse link
G MIR185 microRNA 185 involved_in IDA (PMID:23459944), (PMID:23951060), (PMID:26316588), (PMID:29053187) BHF-UCL PMID:23459944 PMID:23951060 PMID:26316588 PMID:29053187 NCBI chr22:20,033,139...20,033,220
Ensembl chr22:20,033,139...20,033,220
JBrowse link
G MIR18A microRNA 18a involved_in IDA (PMID:28131417), (PMID:29988076), (PMID:34937502) ARUK-UCL PMID:28131417 PMID:29988076 PMID:34937502 NCBI chr13:91,350,751...91,350,821
Ensembl chr13:91,350,751...91,350,821
JBrowse link
G MIR190B microRNA 190b involved_in IDA (PMID:32039833) BHF-UCL PMID:32039833 NCBI chr 1:154,193,665...154,193,743
Ensembl chr 1:154,193,665...154,193,743
JBrowse link
G MIR191 microRNA 191 involved_in IDA (PMID:31874245) BHF-UCL PMID:31874245 NCBI chr 3:49,020,618...49,020,709
Ensembl chr 3:49,020,618...49,020,709
JBrowse link
G MIR192 microRNA 192 involved_in IDA (PMID:28483554) BHF-UCL PMID:28483554 NCBI chr11:64,891,137...64,891,246
Ensembl chr11:64,891,137...64,891,246
JBrowse link
G MIR193A microRNA 193a involved_in IDA (PMID:29725386) BHF-UCL PMID:29725386 NCBI chr17:31,559,996...31,560,083
Ensembl chr17:31,559,996...31,560,083
JBrowse link
G MIR195 microRNA 195 involved_in IDA (PMID:31921616) BHF-UCL PMID:31921616 NCBI chr17:7,017,615...7,017,701
Ensembl chr17:7,017,615...7,017,701
JBrowse link
G MIR196A1 microRNA 196a-1 acts_upstream_of_or_within ISO (MGI:3042528|PMID:15105502), (MGI:3510301|PMID:15361871) MGI PMID:15105502 PMID:15361871 MGI:3042528 MGI:3510301 NCBI chr17:48,632,490...48,632,559
Ensembl chr17:48,632,490...48,632,559
JBrowse link
G MIR196A2 microRNA 196a-2 acts_upstream_of_or_within ISO (MGI:3042528|PMID:15105502), (MGI:3510301|PMID:15361871) MGI PMID:15105502 PMID:15361871 MGI:3042528 MGI:3510301 NCBI chr12:53,991,738...53,991,847
Ensembl chr12:53,991,738...53,991,847
JBrowse link
G MIR196B microRNA 196b acts_upstream_of_or_within ISO (MGI:3042528|PMID:15105502) MGI PMID:15105502 MGI:3042528 NCBI chr 7:27,169,480...27,169,563
Ensembl chr 7:27,169,480...27,169,563
JBrowse link
G MIR199B microRNA 199b involved_in IDA (PMID:32082362) BHF-UCL PMID:32082362 NCBI chr 9:128,244,721...128,244,830
Ensembl chr 9:128,244,721...128,244,830
JBrowse link
G MIR19A microRNA 19a involved_in IDA (PMID:27098600), (PMID:29130787) BHF-UCL PMID:27098600 PMID:29130787 NCBI chr13:91,350,891...91,350,972
Ensembl chr13:91,350,891...91,350,972
JBrowse link
G MIR19B1 microRNA 19b-1 involved_in IDA (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr13:91,351,192...91,351,278
Ensembl chr13:91,351,192...91,351,278
JBrowse link
G MIR19B2 microRNA 19b-2 involved_in IDA (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr  X:134,169,671...134,169,766
Ensembl chr  X:134,169,671...134,169,766
JBrowse link
G MIR200B microRNA 200b involved_in IDA (PMID:22522429) ARUK-UCL PMID:22522429 NCBI chr 1:1,167,104...1,167,198
Ensembl chr 1:1,167,104...1,167,198
JBrowse link
G MIR200C microRNA 200c involved_in IDA (PMID:22522429) ARUK-UCL PMID:22522429 NCBI chr12:6,963,699...6,963,766
Ensembl chr12:6,963,699...6,963,766
JBrowse link
G MIR203A microRNA 203a involved_in IDA (PMID:31788111) BHF-UCL PMID:31788111 NCBI chr14:104,117,405...104,117,514
Ensembl chr14:104,117,405...104,117,514
JBrowse link
G MIR204 microRNA 204 involved_in IDA (PMID:20056717) BHF-UCL PMID:20056717 NCBI chr 9:70,809,975...70,810,084
Ensembl chr 9:70,809,975...70,810,084
JBrowse link
G MIR206 microRNA 206 involved_in IDA (PMID:23499676) BHF-UCL PMID:23499676 NCBI chr 6:52,144,349...52,144,434
Ensembl chr 6:52,144,349...52,144,434
JBrowse link
G MIR20A microRNA 20a involved_in IDA (PMID:29653364), (PMID:31368162) ARUK-UCL PMID:29653364 PMID:31368162 NCBI chr13:91,351,065...91,351,135
Ensembl chr13:91,351,065...91,351,135
JBrowse link
G MIR20B microRNA 20b involved_in IDA (PMID:32336590) BHF-UCL PMID:32336590 NCBI chr  X:134,169,809...134,169,877
Ensembl chr  X:134,169,809...134,169,877
JBrowse link
G MIR210 microRNA 210 involved_in IDA (PMID:29944867) BHF-UCL PMID:29944867 NCBI chr11:568,089...568,198
Ensembl chr11:568,089...568,198
JBrowse link
G MIR211 microRNA 211 involved_in IDA (PMID:21109473) BHF-UCL PMID:21109473 NCBI chr15:31,065,032...31,065,141
Ensembl chr15:31,065,032...31,065,141
JBrowse link
G MIR212 microRNA 212 involved_in IDA (PMID:26693054) BHF-UCL PMID:26693054 NCBI chr17:2,050,271...2,050,380
Ensembl chr17:2,050,271...2,050,380
JBrowse link
G MIR214 microRNA 214 involved_in IDA (PMID:30703347) BHF-UCL PMID:30703347 NCBI chr 1:172,138,798...172,138,907
Ensembl chr 1:172,138,798...172,138,907
JBrowse link
G MIR223 microRNA 223 involved_in IDA (PMID:23459944), (PMID:30807577), (PMID:34637033) ARUK-UCL PMID:23459944 PMID:30807577 PMID:34637033 NCBI chr  X:66,018,870...66,018,979
Ensembl chr  X:66,018,870...66,018,979
JBrowse link
G MIR23A microRNA 23a involved_in IDA (PMID:26400397) BHF-UCL PMID:26400397 NCBI chr19:13,836,587...13,836,659
Ensembl chr19:13,836,587...13,836,659
JBrowse link
G MIR24-1 microRNA 24-1 involved_in IMP (PMID:30378100) BHF-UCL PMID:30378100 NCBI chr 9:95,086,021...95,086,088
Ensembl chr 9:95,086,021...95,086,088
JBrowse link
G MIR24-2 microRNA 24-2 involved_in IMP (PMID:30378100) BHF-UCL PMID:30378100 NCBI chr19:13,836,287...13,836,359
Ensembl chr19:13,836,287...13,836,359
JBrowse link
G MIR26B microRNA 26b involved_in IDA (PMID:25536365) ARUK-UCL PMID:25536365 NCBI chr 2:218,402,646...218,402,722
Ensembl chr 2:218,402,646...218,402,722
JBrowse link
G MIR27A microRNA 27a involved_in IDA (PMID:25915942), (PMID:26400397) BHF-UCL PMID:25915942 PMID:26400397 NCBI chr19:13,836,440...13,836,517
Ensembl chr19:13,836,440...13,836,517
JBrowse link
G MIR27B microRNA 27b involved_in IDA (PMID:30729664) BHF-UCL PMID:30729664 NCBI chr 9:95,085,445...95,085,541
Ensembl chr 9:95,085,445...95,085,541
JBrowse link
G MIR29B1 microRNA 29b-1 involved_in IDA (PMID:26175849) BHF-UCL PMID:26175849 NCBI chr 7:130,877,459...130,877,539
Ensembl chr 7:130,877,459...130,877,539
JBrowse link
G MIR29B2 microRNA 29b-2 involved_in IDA (PMID:26175849) BHF-UCL PMID:26175849 NCBI chr 1:207,802,443...207,802,523
Ensembl chr 1:207,802,443...207,802,523
JBrowse link
G MIR302A microRNA 302a involved_in IDA (PMID:29046356) ARUK-UCL PMID:29046356 NCBI chr 4:112,648,183...112,648,251
Ensembl chr 4:112,648,183...112,648,251
JBrowse link
G MIR302C microRNA 302c involved_in IDA (PMID:22988237) BHF-UCL PMID:22988237 NCBI chr 4:112,648,363...112,648,430
Ensembl chr 4:112,648,363...112,648,430
JBrowse link
G MIR30B microRNA 30b involved_in IMP (PMID:23968872) BHF-UCL PMID:23968872 NCBI chr 8:134,800,520...134,800,607
Ensembl chr 8:134,800,520...134,800,607
JBrowse link
G MIR320A microRNA 320a involved_in IDA (PMID:32271402) BHF-UCL PMID:32271402 NCBI chr 8:22,244,966...22,245,037
Ensembl chr 8:22,244,962...22,245,043
JBrowse link
G MIR326 microRNA 326 involved_in IDA (PMID:24279830) BHF-UCL PMID:24279830 NCBI chr11:75,335,092...75,335,186
Ensembl chr11:75,335,092...75,335,186
JBrowse link
G MIR329-1 microRNA 329-1 involved_in IDA (PMID:23878390) BHF-UCL PMID:23878390 NCBI chr14:101,026,785...101,026,864
Ensembl chr14:101,026,785...101,026,864
JBrowse link
G MIR329-2 microRNA 329-2 involved_in IDA (PMID:23878390) BHF-UCL PMID:23878390 NCBI chr14:101,027,100...101,027,183
Ensembl chr14:101,027,100...101,027,183
JBrowse link
G MIR337 microRNA 337 involved_in IDA (PMID:22723956) BHF-UCL PMID:22723956 NCBI chr14:100,874,493...100,874,585
Ensembl chr14:100,874,493...100,874,585
JBrowse link
G MIR340 microRNA 340 involved_in IDA (PMID:28413603) BHF-UCL PMID:28413603 NCBI chr 5:180,015,303...180,015,397
Ensembl chr 5:180,015,303...180,015,397
JBrowse link
G MIR342 microRNA 342 involved_in IDA (PMID:23951060) BHF-UCL PMID:23951060 NCBI chr14:100,109,655...100,109,753
Ensembl chr14:100,109,655...100,109,753
JBrowse link
G MIR34B microRNA 34b involved_in IDA (PMID:22336710) BHF-UCL PMID:22336710 NCBI chr11:111,512,938...111,513,021
Ensembl chr11:111,512,938...111,513,021
JBrowse link
G MIR365A microRNA 365a involved_in IDA (PMID:30910589) ARUK-UCL PMID:30910589 NCBI chr16:14,309,285...14,309,371
Ensembl chr16:14,309,285...14,309,371
JBrowse link
G MIR365B microRNA 365b involved_in IDA (PMID:30910589) ARUK-UCL PMID:30910589 NCBI chr17:31,575,411...31,575,521
Ensembl chr17:31,575,411...31,575,521
JBrowse link
G MIR373 microRNA 373 involved_in IDA (PMID:22158050) ARUK-UCL PMID:22158050 NCBI chr19:53,788,705...53,788,773
Ensembl chr19:53,788,705...53,788,773
JBrowse link
G MIR423 microRNA 423 involved_in IDA (PMID:32264887) BHF-UCL PMID:32264887 NCBI chr17:30,117,079...30,117,172
Ensembl chr17:30,117,079...30,117,172
JBrowse link
G MIR424 microRNA 424 involved_in IDA (PMID:29130787) BHF-UCL PMID:29130787 NCBI chr  X:134,546,614...134,546,711
Ensembl chr  X:134,546,614...134,546,711
JBrowse link
G MIR4286 microRNA 4286 involved_in IMP (PMID:32141990) BHF-UCL PMID:32141990 NCBI chr 8:10,666,978...10,667,070
Ensembl chr 8:10,666,978...10,667,070
JBrowse link
G MIR483 microRNA 483 involved_in IDA (PMID:26747772) BHF-UCL PMID:26747772 NCBI chr11:2,134,134...2,134,209
Ensembl chr11:2,134,134...2,134,209
JBrowse link
G MIR485 microRNA 485 involved_in IDA (PMID:30058740) BHF-UCL PMID:30058740 NCBI chr14:101,055,419...101,055,491
Ensembl chr14:101,055,419...101,055,491
JBrowse link
G MIR486-1 microRNA 486-1 involved_in IDA (PMID:25857263) BHF-UCL PMID:25857263 NCBI chr 8:41,660,441...41,660,508
Ensembl chr 8:41,660,441...41,660,508
JBrowse link
G MIR486-2 microRNA 486-2 involved_in IDA (PMID:25857263) BHF-UCL PMID:25857263 NCBI chr 8:41,660,444...41,660,507
Ensembl chr 8:41,660,444...41,660,507
JBrowse link
G MIR491 microRNA 491 involved_in IDA (PMID:25196641) BHF-UCL PMID:25196641 NCBI chr 9:20,716,105...20,716,188
Ensembl chr 9:20,716,105...20,716,188
JBrowse link
G MIR495 microRNA 495 involved_in IDA (PMID:33179110) BHF-UCL PMID:33179110 NCBI chr14:101,033,755...101,033,836
Ensembl chr14:101,033,755...101,033,836
JBrowse link
G MIR497 microRNA 497 involved_in IDA (PMID:29969696) BHF-UCL PMID:29969696 NCBI chr17:7,017,911...7,018,022
Ensembl chr17:7,017,911...7,018,022
JBrowse link
G MIR501 microRNA 501 involved_in IDA (PMID:31307515) BHF-UCL PMID:31307515 NCBI chr  X:50,009,722...50,009,805
Ensembl chr  X:50,009,722...50,009,805
JBrowse link
G MIR517A microRNA 517a involved_in IDA (PMID:23142219) BHF-UCL PMID:23142219 NCBI chr19:53,712,268...53,712,354
Ensembl chr19:53,712,268...53,712,354
JBrowse link
G MIR517B microRNA 517b involved_in IDA (PMID:23142219) BHF-UCL PMID:23142219 NCBI chr19:53,721,076...53,721,142
Ensembl chr19:53,721,076...53,721,142
JBrowse link
G MIR517C microRNA 517c involved_in IDA (PMID:23142219) BHF-UCL PMID:23142219 NCBI chr19:53,741,313...53,741,407
Ensembl chr19:53,741,313...53,741,407
JBrowse link
G MIR519A1 microRNA 519a-1 involved_in IDA (PMID:26970980) BHF-UCL PMID:26970980 NCBI chr19:53,752,397...53,752,481
Ensembl chr19:53,752,397...53,752,481
JBrowse link
G MIR519A2 microRNA 519a-2 involved_in IDA (PMID:26970980) BHF-UCL PMID:26970980 NCBI chr19:53,762,344...53,762,430
Ensembl chr19:53,762,344...53,762,430
JBrowse link
G MIR519D microRNA 519d involved_in IDA (PMID:26238950) BHF-UCL PMID:26238950 NCBI chr19:53,713,347...53,713,434
Ensembl chr19:53,713,347...53,713,434
JBrowse link
G MIR520C microRNA 520c involved_in IDA (PMID:22158050) ARUK-UCL PMID:22158050 NCBI chr19:53,707,453...53,707,539
Ensembl chr19:53,707,453...53,707,539
JBrowse link
G MIR543 microRNA 543 involved_in IDA (PMID:24699721) BHF-UCL PMID:24699721 NCBI chr14:101,031,987...101,032,064
Ensembl chr14:101,031,987...101,032,064
JBrowse link
G MIR544A microRNA 544a involved_in IDA (PMID:27186677) BHF-UCL PMID:27186677 NCBI chr14:101,048,658...101,048,748
Ensembl chr14:101,048,658...101,048,748
JBrowse link
G MIR562 microRNA 562 involved_in IDA (PMID:25536365) ARUK-UCL PMID:25536365 NCBI chr 2:232,172,653...232,172,747
Ensembl chr 2:232,172,653...232,172,747
JBrowse link
G MIR564 microRNA 564 involved_in IDA (PMID:27621042) BHF-UCL PMID:27621042 NCBI chr 3:44,861,888...44,861,981
Ensembl chr 3:44,861,888...44,861,981
JBrowse link
G MIR608 microRNA 608 involved_in IDA (PMID:31749032) BHF-UCL PMID:31749032 NCBI chr10:100,974,985...100,975,084
Ensembl chr10:100,974,985...100,975,084
JBrowse link
G MIR625 microRNA 625 involved_in IDA (PMID:32152961) ARUK-UCL PMID:32152961 NCBI chr14:65,471,102...65,471,186
Ensembl chr14:65,471,102...65,471,186
JBrowse link
G MIR655 microRNA 655 involved_in IDA (PMID:23690952) BHF-UCL PMID:23690952 NCBI chr14:101,049,550...101,049,646
Ensembl chr14:101,049,550...101,049,646
JBrowse link
G MIR663A microRNA 663a involved_in IDA (PMID:26687649) BHF-UCL PMID:26687649 NCBI chr20:26,208,186...26,208,278
Ensembl chr20:26,208,186...26,208,278
JBrowse link
G MIR665 microRNA 665 involved_in IDA (PMID:34454184) BHF-UCL PMID:34454184 NCBI chr14:100,875,033...100,875,104
Ensembl chr14:100,875,033...100,875,104
JBrowse link
G MIR708 microRNA 708 involved_in IDA (PMID:26932538) BHF-UCL PMID:26932538 NCBI chr11:79,402,022...79,402,109
Ensembl chr11:79,402,022...79,402,109
JBrowse link
G MIR885 microRNA 885 involved_in IDA (PMID:24882581) BHF-UCL PMID:24882581 NCBI chr 3:10,394,489...10,394,562
Ensembl chr 3:10,394,489...10,394,562
JBrowse link
G MIR9-1 microRNA 9-1 involved_in IDA
IMP
(PMID:29584810)
(PMID:26315535)
BHF-UCL PMID:26315535 PMID:29584810 NCBI chr 1:156,420,341...156,420,429
Ensembl chr 1:156,420,341...156,420,429
JBrowse link
G MIR9-2 microRNA 9-2 involved_in IDA
IMP
(PMID:29584810)
(PMID:26315535)
BHF-UCL PMID:26315535 PMID:29584810 NCBI chr 5:88,666,853...88,666,939
Ensembl chr 5:88,666,853...88,666,939
JBrowse link
G MIR9-3 microRNA 9-3 involved_in IDA
IMP
(PMID:29584810)
(PMID:26315535)
BHF-UCL PMID:26315535 PMID:29584810 NCBI chr15:89,368,017...89,368,106
Ensembl chr15:89,368,017...89,368,106
JBrowse link
G MIR93 microRNA 93 involved_in IDA (PMID:24606633), (PMID:28797104) BHF-UCL PMID:24606633 PMID:28797104 NCBI chr 7:100,093,768...100,093,847
Ensembl chr 7:100,093,768...100,093,847
JBrowse link
G MIR96 microRNA 96 involved_in IDA (PMID:23459944) BHF-UCL PMID:23459944 NCBI chr 7:129,774,692...129,774,769
Ensembl chr 7:129,774,692...129,774,769
JBrowse link
G MIR98 microRNA 98 involved_in IDA
IMP
(PMID:27860183), (PMID:30195495)
(PMID:28251559)
BHF-UCL PMID:27860183 PMID:28251559 PMID:30195495 NCBI chr  X:53,556,223...53,556,341
Ensembl chr  X:53,556,223...53,556,341
JBrowse link
G MIRLET7A1 microRNA let-7a-1 involved_in IMP
IDA
(PMID:17671087)
(PMID:30467960)
BHF-UCL PMID:17671087 PMID:30467960 NCBI chr 9:94,175,957...94,176,036
Ensembl chr 9:94,175,957...94,176,036
JBrowse link
G MIRLET7A2 microRNA let-7a-2 involved_in IMP
IDA
(PMID:17671087)
(PMID:30467960)
BHF-UCL PMID:17671087 PMID:30467960 NCBI chr11:122,146,522...122,146,593
Ensembl chr11:122,146,522...122,146,593
JBrowse link
G MIRLET7A3 microRNA let-7a-3 involved_in IMP
IDA
(PMID:17671087)
(PMID:30467960)
BHF-UCL PMID:17671087 PMID:30467960 NCBI chr22:46,112,749...46,112,822
Ensembl chr22:46,112,749...46,112,822
JBrowse link
G MIRLET7B microRNA let-7b involved_in IDA (PMID:29471394) BHF-UCL PMID:29471394 NCBI chr22:46,113,686...46,113,768
Ensembl chr22:46,113,686...46,113,768
JBrowse link
G MIRLET7C microRNA let-7c involved_in IDA (PMID:19841744) BHF-UCL PMID:19841744 NCBI chr21:16,539,828...16,539,911
Ensembl chr21:16,539,828...16,539,911
JBrowse link
G MIRLET7E microRNA let-7e involved_in IDA (PMID:30670152) ARUK-UCL PMID:30670152 NCBI chr19:51,692,786...51,692,864
Ensembl chr19:51,692,786...51,692,864
JBrowse link
G MOV10 Mov10 RNA helicase involved_in IDA (PMID:16289642) UniProt PMID:16289642 NCBI chr 1:112,674,439...112,700,739
Ensembl chr 1:112,673,141...112,700,756
JBrowse link
mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALKBH5 alkB homolog 5, RNA demethylase involved_in ISS
IDA
IEA
(PMID:34048572), (PMID:37257451) UniProt
Ensembl
PMID:34048572 PMID:37257451 GO_REF:0000024 GO_REF:0000107 NCBI chr17:18,183,828...18,209,954
Ensembl chr17:18,183,078...18,209,954
JBrowse link
G CELF1 CUGBP Elav-like family member 1 involved_in ISS (PMID:30508596) ARUK-UCL PMID:30508596 NCBI chr11:47,465,937...47,565,539
Ensembl chr11:47,465,933...47,565,569
JBrowse link
G CNOT6L CCR4-NOT transcription complex subunit 6 like acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828348|PMID:17452450) MGI
Ensembl
PMID:17452450 GO_REF:0000107 MGI:3828348 NCBI chr 4:77,713,387...77,820,269
Ensembl chr 4:77,713,387...77,819,615
JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 involved_in ISO
IEA
RGD
Ensembl
PMID:26682942 GO_REF:0000107 RGD:329961560 NCBI chr19:7,958,573...8,005,641
Ensembl chr19:7,958,573...8,005,659
JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase involved_in IDA (PMID:28002401), (PMID:30197295) UniProt PMID:28002401 PMID:30197295 NCBI chr16:53,703,963...54,121,941
Ensembl chr16:53,701,692...54,158,512
JBrowse link
G FXR1 FMR1 autosomal homolog 1 involved_in IDA (PMID:30067974) UniProt PMID:30067974 NCBI chr 3:180,912,670...180,982,753
Ensembl chr 3:180,868,141...180,982,753
JBrowse link
G FXR2 FMR1 autosomal homolog 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr17:7,591,230...7,614,897
Ensembl chr17:7,591,230...7,614,897
JBrowse link
G GIGYF2 GRB10 interacting GYF protein 2 involved_in IDA (PMID:27157137) ParkinsonsUK-UCL PMID:27157137 NCBI chr 2:232,697,331...232,860,605
Ensembl chr 2:232,697,299...232,860,605
JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chr 1:23,304,688...23,344,284
Ensembl chr 1:23,303,771...23,344,336
JBrowse link
G METTL14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 NCBI chr 4:118,685,392...118,715,430
Ensembl chr 4:118,685,392...118,715,433
JBrowse link
G METTL16 methyltransferase 16, RNA N6-adenosine involved_in ISS UniProt GO_REF:0000024 NCBI chr17:2,415,715...2,511,888
Ensembl chr17:2,405,562...2,511,891
JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISS UniProt GO_REF:0000024 NCBI chr14:21,498,138...21,511,340
Ensembl chr14:21,498,133...21,511,342
JBrowse link
G MEX3D mex-3 RNA binding family member D involved_in NAS (PMID:14769789) BHF-UCL PMID:14769789 NCBI chr19:1,554,672...1,568,325
Ensembl chr19:1,554,672...1,568,325
JBrowse link
G MIR144 microRNA 144 involved_in ISO (MGI:6442632|PMID:30971389) MGI PMID:30971389 MGI:6442632 NCBI chr17:28,861,533...28,861,618
Ensembl chr17:28,861,533...28,861,618
JBrowse link
G MIR451A microRNA 451a involved_in ISO (MGI:6442632|PMID:30971389) MGI PMID:30971389 MGI:6442632 NCBI chr17:28,861,369...28,861,440
Ensembl chr17:28,861,369...28,861,440
JBrowse link
G MIR451B microRNA 451b involved_in ISO (MGI:6442632|PMID:30971389) MGI PMID:30971389 MGI:6442632 NCBI chr17:28,861,371...28,861,438
Ensembl chr17:28,861,371...28,861,438
JBrowse link
G PUM1 pumilio RNA binding family member 1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:30,931,506...31,065,717
Ensembl chr 1:30,931,506...31,065,991
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in IMP (PMID:29104163) UniProt PMID:29104163 NCBI chr 6:17,281,361...17,293,871
Ensembl chr 6:17,281,361...17,293,871
JBrowse link
G RIDA reactive intermediate imine deaminase A homolog involved_in IDA (PMID:30930054) UniProt PMID:30930054 NCBI chr 8:98,102,344...98,117,171
Ensembl chr 8:98,102,344...98,117,171
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in ISS
IEA
ARUK-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr18:20,946,906...21,111,813
Ensembl chr18:20,944,612...21,111,813
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr 2:11,179,759...11,345,437
Ensembl chr 2:11,179,759...11,348,330
JBrowse link
G TUT4 terminal uridylyl transferase 4 involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:52,423,275...52,553,463
Ensembl chr 1:52,408,282...52,553,487
JBrowse link
G TUT7 terminal uridylyl transferase 7 involved_in IEA UniProt GO_REF:0000117 NCBI chr 9:86,287,733...86,354,410
Ensembl chr 9:86,287,733...86,354,454
JBrowse link
G YTHDF1 YTH N6-methyladenosine RNA binding protein F1 involved_in IDA
IEA
IBA
(PMID:32492408) UniProt
TreeGrafter
GO_Central
PMID:32492408 GO_REF:0000033 GO_REF:0000118 NCBI chr20:63,195,429...63,216,131
Ensembl chr20:63,195,429...63,216,139
JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein F2 involved_in IEA
IBA
IMP
IDA
(PMID:28106072), (PMID:32169943)
(PMID:27558897), (PMID:30559377), (PMID:30930054), (PMID:32492408)
Ensembl
GO_Central
TreeGrafter
UniProt
PMID:27558897 PMID:28106072 PMID:30559377 PMID:30930054 PMID:32169943 More... GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:28,736,624...28,769,775
Ensembl chr 1:28,736,621...28,769,775
JBrowse link
G YTHDF3 YTH N6-methyladenosine RNA binding protein F3 involved_in IEA
IBA
IDA
IMP
(PMID:32492408)
(PMID:28106072)
Ensembl
TreeGrafter
GO_Central
UniProt
PMID:28106072 PMID:32492408 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:63,168,553...63,212,788
Ensembl chr 8:63,168,553...63,212,786
JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3057047|PMID:15480992) MGI
Ensembl
PMID:15480992 GO_REF:0000107 MGI:3057047 NCBI chr12:7,649,400...7,670,599
Ensembl chr12:7,649,400...7,665,908
JBrowse link
G AXIN2 axin 2 involved_in IMP (PMID:17072303) BHF-UCL PMID:17072303 NCBI chr17:65,528,563...65,561,648
Ensembl chr17:65,528,563...65,561,648
JBrowse link
G CIRBP cold inducible RNA binding protein involved_in IDA (PMID:11574538) UniProt PMID:11574538 NCBI chr19:1,269,332...1,274,880
Ensembl chr19:1,259,384...1,274,880
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr14:95,086,228...95,158,010
Ensembl chr14:95,086,228...95,158,010
JBrowse link
G DND1 DND microRNA-mediated repression inhibitor 1 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 5:140,670,794...140,673,576
Ensembl chr 5:140,670,794...140,673,576
JBrowse link
G E2F1 E2F transcription factor 1 involved_in IDA (PMID:15766563) BHF-UCL PMID:15766563 NCBI chr20:33,675,477...33,686,385
Ensembl chr20:33,675,477...33,686,385
JBrowse link
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in IDA (PMID:24335285), (PMID:32354837) UniProt PMID:24335285 PMID:32354837 NCBI chr22:31,436,963...31,493,568
Ensembl chr22:31,436,977...31,496,108
JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 involved_in
acts_upstream_of_or_within
IDA
IEA
IMP
(PMID:31358969)
(PMID:19029303)
(PMID:21613615)
UniProt
Ensembl
MGI
PMID:19029303 PMID:21613615 PMID:31358969 GO_REF:0000107 NCBI chr19:7,958,573...8,005,641
Ensembl chr19:7,958,573...8,005,659
JBrowse link
G FUS FUS RNA binding protein acts_upstream_of_or_within IDA (PMID:27378374) MGI PMID:27378374 NCBI chr16:31,180,110...31,194,871
Ensembl chr16:31,180,138...31,191,605
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IDA (PMID:12358785) BHF-UCL PMID:12358785 NCBI chr 5:37,812,677...37,840,041
Ensembl chr 5:37,812,677...37,840,041
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in ISO
IEA
RGD
Ensembl
PMID:15192077 GO_REF:0000107 RGD:1357938 NCBI chr 4:82,352,498...82,373,991
Ensembl chr 4:82,352,498...82,374,503
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IDA (PMID:17174306) UniProt PMID:17174306 NCBI chr 1:244,850,297...244,864,543
Ensembl chr 1:244,840,638...244,864,560
JBrowse link
G IKBKE inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:206,470,476...206,496,889
Ensembl chr 1:206,470,476...206,496,889
JBrowse link
G IREB2 iron responsive element binding protein 2 involved_in TAS (PMID:9924025) UniProt PMID:9924025 NCBI chr15:78,437,431...78,501,453
Ensembl chr15:78,437,431...78,501,453
JBrowse link
G LARP1 La ribonucleoprotein 1, translational regulator involved_in IMP
IEA
(PMID:25940091), (PMID:28673543) UniProt
InterPro
PMID:25940091 PMID:28673543 GO_REF:0000002 NCBI chr 5:154,682,979...154,817,605
Ensembl chr 5:154,682,986...154,817,605
JBrowse link
G LARP1B La ribonucleoprotein 1B involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:128,060,789...128,222,926
Ensembl chr 4:128,061,286...128,222,931
JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2158083|PMID:11741878) MGI
Ensembl
PMID:11741878 GO_REF:0000107 MGI:2158083 NCBI chr 1:206,684,905...206,734,281
Ensembl chr 1:206,684,905...206,734,281
JBrowse link
G MEIOC meiosis specific with coiled-coil domain involved_in IEA
IBA
Ensembl
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:44,656,468...44,677,087
Ensembl chr17:44,656,404...44,690,308
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:21073857 RGD:10040969 NCBI chr 1:11,106,535...11,262,551
Ensembl chr 1:11,106,535...11,262,556
JBrowse link
G NOCT nocturnin involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:139,015,781...139,045,939
Ensembl chr 4:139,015,781...139,045,939
JBrowse link
G NRDE2 NRDE-2, necessary for RNA interference, domain containing involved_in IMP (PMID:30842217) UniProt PMID:30842217 NCBI chr14:90,267,860...90,331,941
Ensembl chr14:90,267,860...90,331,969
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in TAS (PMID:11997512) UniProt PMID:11997512 NCBI chr 8:100,702,916...100,722,088
Ensembl chr 8:100,685,816...100,722,809
JBrowse link
G PAIP1 poly(A) binding protein interacting protein 1 involved_in TAS (PMID:11997512) UniProt PMID:11997512 NCBI chr 5:43,526,267...43,557,411
Ensembl chr 5:43,526,267...43,557,758
JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in ISO
IDA
(PMID:32732889) RGD
UniProt
PMID:16855020 PMID:32732889 RGD:10045995 NCBI chr 6:163,414,718...163,578,592
Ensembl chr 6:163,414,000...163,578,592
JBrowse link
G RBM10 RNA binding motif protein 10 ISO RGD PMID:19508861 RGD:151667451 NCBI chr  X:47,145,221...47,186,813
Ensembl chr  X:47,145,221...47,186,813
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in IMP
IEA
IBA
(PMID:29104163) UniProt
TreeGrafter
GO_Central
PMID:29104163 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:17,281,361...17,293,871
Ensembl chr 6:17,281,361...17,293,871
JBrowse link
G RBM46 RNA binding motif protein 46 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5644240|PMID:25397698) MGI
Ensembl
PMID:25397698 GO_REF:0000107 MGI:5644240 NCBI chr 4:154,781,272...154,828,813
Ensembl chr 4:154,781,213...154,828,813
JBrowse link
G SEPTIN14P20 septin 14 pseudogene 20 involved_in IDA (PMID:32245947) UniProt PMID:32245947 NCBI chr20:64,290,385...64,303,354
Ensembl chr20:64,290,385...64,313,132
Ensembl chr20:64,290,385...64,313,132
JBrowse link
G SLC11A1 solute carrier family 11 member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(MGI:85148|PMID:9009318) MGI
Ensembl
BHF-UCL
PMID:9009318 GO_REF:0000024 GO_REF:0000107 MGI:85148 NCBI chr 2:218,382,273...218,396,894
Ensembl chr 2:218,382,029...218,396,894
JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 involved_in ISO (MGI:5291882|PMID:21822258) MGI PMID:21822258 MGI:5291882 NCBI chr17:57,989,038...58,007,246
Ensembl chr17:58,000,919...58,007,346
JBrowse link
G TAF15 TATA-box binding protein associated factor 15 acts_upstream_of_or_within IDA (PMID:27378374) MGI PMID:27378374 NCBI chr17:35,809,484...35,847,242
Ensembl chr17:35,809,482...35,864,615
JBrowse link
G TENT5A terminal nucleotidyltransferase 5A involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 6:81,745,730...81,752,681
Ensembl chr 6:81,491,439...81,752,774
JBrowse link
G TENT5B terminal nucleotidyltransferase 5B involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:27,005,020...27,012,850
Ensembl chr 1:27,005,020...27,012,850
JBrowse link
G TENT5C terminal nucleotidyltransferase 5C involved_in IDA
IEA
IBA
(PMID:28931820) UniProt
TreeGrafter
GO_Central
Ensembl
PMID:28931820 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:117,606,048...117,628,389
Ensembl chr 1:117,606,048...117,628,389
JBrowse link
G TENT5D terminal nucleotidyltransferase 5D involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr  X:80,335,504...80,445,309
Ensembl chr  X:80,335,504...80,445,311
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IMP (PMID:18794151) UniProt PMID:18794151 NCBI chr 1:36,207,637...36,305,357
Ensembl chr 1:36,224,432...36,305,357
JBrowse link
G TRAF2 TNF receptor associated factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:136,881,958...136,926,607
Ensembl chr 9:136,881,912...136,926,607
JBrowse link
G TRAF3IP2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:111,555,381...111,605,878
Ensembl chr 6:111,555,381...111,606,906
JBrowse link
G TRAF5 TNF receptor associated factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:211,326,635...211,374,946
Ensembl chr 1:211,326,615...211,374,946
JBrowse link
G VEGFA vascular endothelial growth factor A ISO RGD PMID:12881220 RGD:1580563 NCBI chr 6:43,770,211...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
G VIP vasoactive intestinal peptide involved_in ISS AgBase GO_REF:0000024 NCBI chr 6:152,750,797...152,759,760
Ensembl chr 6:152,750,797...152,759,765
JBrowse link
G YBX1 Y-box binding protein 1 involved_in IDA (PMID:31358969) UniProt PMID:31358969 NCBI chr 1:42,682,418...42,703,805
Ensembl chr 1:42,682,418...42,703,805
JBrowse link
G YBX2 Y-box binding protein 2 acts_upstream_of_or_within ISO (MGI:3696301|PMID:17035640) MGI PMID:17035640 MGI:3696301 NCBI chr17:7,288,263...7,294,639
Ensembl chr17:7,288,263...7,294,639
JBrowse link
G ZAR1 zygote arrest 1 involved_in ISS (PMID:36264786) UniProt PMID:36264786 GO_REF:0000024 NCBI chr 4:48,490,252...48,497,635
Ensembl chr 4:48,490,252...48,494,389
JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G METTL16 methyltransferase 16, RNA N6-adenosine involved_in IDA (PMID:28525753) UniProt PMID:28525753 NCBI chr17:2,415,715...2,511,888
Ensembl chr17:2,405,562...2,511,891
JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:163,414,718...163,578,592
Ensembl chr 6:163,414,000...163,578,592
JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in IDA (PMID:32354837) UniProt PMID:32354837 NCBI chr22:31,436,963...31,493,568
Ensembl chr22:31,436,977...31,496,108
JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSDE1 cold shock domain containing E1 involved_in IDA (PMID:11051545) ComplexPortal PMID:11051545 NCBI chr 1:114,716,916...114,757,984
Ensembl chr 1:114,716,913...114,758,676
JBrowse link
G DHX9 DExH-box helicase 9 involved_in IDA (PMID:19029303) ComplexPortal PMID:19029303 NCBI chr 1:182,839,347...182,887,982
Ensembl chr 1:182,839,347...182,887,982
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IDA (PMID:11051545) ComplexPortal PMID:11051545 NCBI chr 4:82,352,498...82,373,991
Ensembl chr 4:82,352,498...82,374,503
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IDA (PMID:19029303) ComplexPortal PMID:19029303 NCBI chr 1:244,850,297...244,864,543
Ensembl chr 1:244,840,638...244,864,560
JBrowse link
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 involved_in IDA (PMID:19029303) ComplexPortal PMID:19029303 NCBI chr17:48,996,558...49,056,145
Ensembl chr17:48,997,385...49,056,145
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in IDA (PMID:11051545) ComplexPortal PMID:11051545 NCBI chr 8:100,702,916...100,722,088
Ensembl chr 8:100,685,816...100,722,809
JBrowse link
G PAIP1 poly(A) binding protein interacting protein 1 involved_in IDA (PMID:11051545) ComplexPortal PMID:11051545 NCBI chr 5:43,526,267...43,557,411
Ensembl chr 5:43,526,267...43,557,758
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein involved_in IDA (PMID:11051545), (PMID:19029303) ComplexPortal PMID:11051545 PMID:19029303 NCBI chr 6:85,607,784...85,643,870
Ensembl chr 6:85,607,779...85,644,063
JBrowse link
G YBX1 Y-box binding protein 1 involved_in IDA (PMID:19029303) ComplexPortal PMID:19029303 NCBI chr 1:42,682,418...42,703,805
Ensembl chr 1:42,682,418...42,703,805
JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TENT4A terminal nucleotidyltransferase 4A involved_in IMP (PMID:30026317) UniProt PMID:30026317 NCBI chr 5:6,713,432...6,757,044
Ensembl chr 5:6,713,432...6,757,044
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in IMP (PMID:30026317) UniProt PMID:30026317 NCBI chr16:50,152,911...50,235,310
Ensembl chr16:50,152,911...50,235,310
JBrowse link
G TOB1 transducer of ERBB2, 1 involved_in IDA (PMID:18377426) UniProt PMID:18377426 NCBI chr17:50,862,223...50,867,978
Ensembl chr17:50,862,223...50,867,978
JBrowse link
nuclear polyadenylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC7 exosome component 7 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 3:44,976,244...45,012,668
Ensembl chr 3:44,975,241...45,036,066
JBrowse link
G EXOSC8 exosome component 8 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr13:37,000,786...37,009,614
Ensembl chr13:36,998,816...37,025,881
JBrowse link
G EXOSC9 exosome component 9 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 4:121,801,323...121,817,021
Ensembl chr 4:121,801,318...121,817,021
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IDA (PMID:16934922) UniProt PMID:16934922 NCBI chr 2:55,634,061...55,693,844
Ensembl chr 2:55,634,061...55,693,863
JBrowse link
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT1 CCR4-NOT transcription complex subunit 1 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr16:58,519,951...58,629,826
Ensembl chr16:58,519,951...58,629,885
JBrowse link
G CNOT6L CCR4-NOT transcription complex subunit 6 like acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3828348|PMID:17452450) MGI
Ensembl
PMID:17452450 GO_REF:0000107 MGI:3828348 NCBI chr 4:77,713,387...77,820,269
Ensembl chr 4:77,713,387...77,819,615
JBrowse link
G DCPS decapping enzyme, scavenger involved_in TAS
IEA
(PMID:12198172), (PMID:15383679), (PMID:22985415) UniProt PMID:12198172 PMID:15383679 PMID:22985415 GO_REF:0000117 NCBI chr11:126,304,060...126,350,005
Ensembl chr11:126,304,060...126,350,005
JBrowse link
G PABPN1L PABPN1 like, cytoplasmic acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:6509513|PMID:32558204) MGI
GO_Central
PMID:32558204 GO_REF:0000033 MGI:6509513 NCBI chr16:88,863,333...88,870,135
Ensembl chr16:88,863,333...88,866,660
JBrowse link
G PAN2 poly(A) specific ribonuclease subunit PAN2 involved_in IEA UniProt GO_REF:0000104 NCBI chr12:56,316,936...56,334,000
Ensembl chr12:56,316,223...56,334,053
JBrowse link
G PAN3 poly(A) specific ribonuclease subunit PAN3 involved_in IEA UniProt GO_REF:0000104 NCBI chr13:28,138,193...28,295,335
Ensembl chr13:28,138,506...28,295,335
JBrowse link
G PDE12 phosphodiesterase 12 involved_in IMP
IBA
IEA
(PMID:21245038) UniProt
GO_Central
TreeGrafter
PMID:21245038 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:57,556,274...57,656,495
Ensembl chr 3:57,556,274...57,566,848
JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in IEA
IBA
Ensembl
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:173,931,084...174,022,357
Ensembl chr 1:173,931,084...174,022,357
JBrowse link
G RC3H2 ring finger and CCCH-type domains 2 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 9:122,844,556...122,905,359
Ensembl chr 9:122,844,556...122,905,359
JBrowse link
G ZFP36 ZFP36 ring finger protein acts_upstream_of_or_within
involved_in
ISO
IEA
IDA
(MGI:3589099|PMID:15814898)
(PMID:23644599)
MGI
Ensembl
UniProt
PMID:15814898 PMID:23644599 GO_REF:0000107 MGI:3589099 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3589099|PMID:15814898) MGI
Ensembl
PMID:15814898 GO_REF:0000107 MGI:3589099 NCBI chr14:68,787,655...68,796,243
Ensembl chr14:68,787,660...68,796,253
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3589099|PMID:15814898) MGI
Ensembl
PMID:15814898 GO_REF:0000107 MGI:3589099 NCBI chr 2:43,222,402...43,226,606
Ensembl chr 2:43,222,402...43,226,606
JBrowse link
nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT1 CCR4-NOT transcription complex subunit 1 involved_in NAS (PMID:31320642) ComplexPortal PMID:31320642 NCBI chr16:58,519,951...58,629,826
Ensembl chr16:58,519,951...58,629,885
JBrowse link
G CNOT10 CCR4-NOT transcription complex subunit 10 involved_in NAS (PMID:31320642) ComplexPortal PMID:31320642 NCBI chr 3:32,685,188...32,773,875
Ensembl chr 3:32,685,145...32,773,875
JBrowse link
G CNOT11 CCR4-NOT transcription complex subunit 11 involved_in NAS (PMID:31320642) ComplexPortal PMID:31320642 NCBI chr 2:101,252,886...101,270,316
Ensembl chr 2:101,252,886...101,270,316
JBrowse link
G CNOT2 CCR4-NOT transcription complex subunit 2 involved_in NAS
IEA
IBA
(PMID:31320642) ComplexPortal
TreeGrafter
GO_Central
PMID:31320642 GO_REF:0000033 GO_REF:0000118 NCBI chr12:70,243,018...70,354,993
Ensembl chr12:70,243,002...70,354,993
JBrowse link
G CNOT3 CCR4-NOT transcription complex subunit 3 involved_in IEA
IBA
NAS
(PMID:31320642) UniProt
TreeGrafter
GO_Central
ComplexPortal
PMID:31320642 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr19:54,137,762...54,155,681
Ensembl chr19:54,137,749...54,155,681
JBrowse link
G CNOT4 CCR4-NOT transcription complex subunit 4 involved_in NAS (PMID:31320642) ComplexPortal PMID:31320642 NCBI chr 7:135,361,795...135,510,102
Ensembl chr 7:135,361,795...135,510,145
JBrowse link
G CNOT6 CCR4-NOT transcription complex subunit 6 involved_in TAS
IEA
IBA
NAS
IMP
(PMID:31320642)
(PMID:20595389)
Reactome
TreeGrafter
GO_Central
ComplexPortal
UniProt
PMID:20595389 PMID:31320642 GO_REF:0000033 GO_REF:0000118 Reactome:R-HSA-429947 NCBI chr 5:180,494,379...180,578,358
Ensembl chr 5:180,494,379...180,578,358
JBrowse link
G CNOT6L CCR4-NOT transcription complex subunit 6 like involved_in TAS
IBA
IEA
NAS
(PMID:31320642) Reactome
GO_Central
TreeGrafter
ComplexPortal
PMID:31320642 GO_REF:0000033 GO_REF:0000118 Reactome:R-HSA-429947 NCBI chr 4:77,713,387...77,820,269
Ensembl chr 4:77,713,387...77,819,615
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 acts_upstream_of_or_within
involved_in
ISO
NAS
IEA
(MGI:3807625|PMID:18625844)
(PMID:31320642)
MGI
ComplexPortal
Ensembl
PMID:18625844 PMID:31320642 GO_REF:0000107 MGI:3807625 NCBI chr 8:17,224,966...17,246,857
Ensembl chr 8:17,224,966...17,246,878
JBrowse link
G CNOT8 CCR4-NOT transcription complex subunit 8 involved_in NAS (PMID:31320642) ComplexPortal PMID:31320642 NCBI chr 5:154,858,249...154,876,792
Ensembl chr 5:154,857,553...154,876,792
JBrowse link
G CNOT9 CCR4-NOT transcription complex subunit 9 involved_in NAS (PMID:31320642) ComplexPortal PMID:31320642 NCBI chr 2:218,568,839...218,597,080
Ensembl chr 2:218,568,580...218,597,080
JBrowse link
G MLH1 mutL homolog 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1934053|PMID:11337385) MGI
Ensembl
PMID:11337385 GO_REF:0000107 MGI:1934053 NCBI chr 3:36,993,466...37,050,846
Ensembl chr 3:36,993,226...37,050,896
JBrowse link
G PAN2 poly(A) specific ribonuclease subunit PAN2 involved_in IEA
IBA
TAS
InterPro
TreeGrafter
GO_Central
UniProt
Reactome
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 Reactome:R-HSA-429947 NCBI chr12:56,316,936...56,334,000
Ensembl chr12:56,316,223...56,334,053
JBrowse link
G PAN3 poly(A) specific ribonuclease subunit PAN3 involved_in IEA
IBA
UniProt
GO_Central
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr13:28,138,193...28,295,335
Ensembl chr13:28,138,506...28,295,335
JBrowse link
G PARN poly(A)-specific ribonuclease acts_upstream_of_or_within
involved_in
ISO
IBA
IEA
(MGI:3785219|PMID:18337750) MGI
GO_Central
TreeGrafter
PMID:18337750 GO_REF:0000033 GO_REF:0000118 MGI:3785219 NCBI chr16:14,435,701...14,630,260
Ensembl chr16:14,435,700...14,632,728
JBrowse link
G PNLDC1 PARN like ribonuclease domain containing exonuclease 1 involved_in IEA
IBA
IDA
(PMID:27515512) Ensembl
TreeGrafter
GO_Central
UniProt
PMID:27515512 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:159,799,455...159,820,704
Ensembl chr 6:159,800,249...159,820,704
JBrowse link
G SAMD4A sterile alpha motif domain containing 4A involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr14:54,565,316...54,793,315
Ensembl chr14:54,566,117...54,793,315
JBrowse link
G SAMD4B sterile alpha motif domain containing 4B involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr19:39,342,421...39,390,764
Ensembl chr19:39,342,421...39,385,710
JBrowse link
G TNKS1BP1 tankyrase 1 binding protein 1 involved_in NAS (PMID:31320642) ComplexPortal PMID:31320642 NCBI chr11:57,299,642...57,324,952
Ensembl chr11:57,299,638...57,324,952
JBrowse link
G ZFP36 ZFP36 ring finger protein acts_upstream_of_or_within
involved_in
ISO
IMP
IEA
(MGI:3589099|PMID:15814898)
(PMID:23644599)
MGI
BHF-UCL
Ensembl
PMID:15814898 PMID:23644599 GO_REF:0000107 MGI:3589099 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412
JBrowse link
polyuridylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in IEA
ISS
UniProt GO_REF:0000024 GO_REF:0000104 NCBI chr 2:231,961,713...232,344,350
Ensembl chr 2:231,961,245...232,344,350
JBrowse link
G TUT4 terminal uridylyl transferase 4 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:52,423,275...52,553,463
Ensembl chr 1:52,408,282...52,553,487
JBrowse link
G TUT7 terminal uridylyl transferase 7 involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:86,287,733...86,354,410
Ensembl chr 9:86,287,733...86,354,454
JBrowse link
positive regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELAVL4 ELAV like RNA binding protein 4 involved_in IDA (PMID:18218628) UniProt PMID:18218628 NCBI chr 1:50,048,055...50,203,772
Ensembl chr 1:50,024,029...50,203,772
JBrowse link
G LARP4B La ribonucleoprotein 4B involved_in IMP (PMID:26001795) FlyBase PMID:26001795 NCBI chr10:806,914...988,341
Ensembl chr10:806,933...931,821
JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in ISO (MGI:5903342|PMID:28188285) UniProt PMID:28188285 MGI:5903342 NCBI chr 6:163,414,718...163,578,592
Ensembl chr 6:163,414,000...163,578,592
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in IMP (PMID:24356969) UniProt PMID:24356969 NCBI chr 6:17,281,361...17,293,871
Ensembl chr 6:17,281,361...17,293,871
JBrowse link
G TENT4A terminal nucleotidyltransferase 4A involved_in IMP (PMID:30026317) UniProt PMID:30026317 NCBI chr 5:6,713,432...6,757,044
Ensembl chr 5:6,713,432...6,757,044
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in IMP (PMID:30026317) UniProt PMID:30026317 NCBI chr16:50,152,911...50,235,310
Ensembl chr16:50,152,911...50,235,310
JBrowse link
positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO2 argonaute RISC catalytic component 2 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:140,520,156...140,642,313
Ensembl chr 8:140,520,156...140,635,633
JBrowse link
G CNOT1 CCR4-NOT transcription complex subunit 1 involved_in IMP (PMID:21278420) UniProt PMID:21278420 NCBI chr16:58,519,951...58,629,826
Ensembl chr16:58,519,951...58,629,885
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IMP
IEA
(PMID:21278420) UniProt
Ensembl
PMID:21278420 GO_REF:0000107 NCBI chr 8:17,224,966...17,246,857
Ensembl chr 8:17,224,966...17,246,878
JBrowse link
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in IDA (PMID:21336257) UniProt PMID:21336257 NCBI chr10:92,046,692...92,291,233
Ensembl chr10:92,046,692...92,291,078
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IMP (PMID:14731398) UniProt PMID:14731398 NCBI chr 3:154,272,546...154,324,487
Ensembl chr 3:154,272,546...154,324,487
JBrowse link
G NANOS1 nanos C2HC-type zinc finger 1 involved_in IDA (PMID:24736845) BHF-UCL PMID:24736845 NCBI chr10:119,029,714...119,033,730
Ensembl chr10:119,029,714...119,033,730
JBrowse link
G NANOS2 nanos C2HC-type zinc finger 2 involved_in IDA (PMID:24736845) BHF-UCL PMID:24736845 NCBI chr19:45,913,214...45,914,778
Ensembl chr19:45,913,214...45,914,778
JBrowse link
G NANOS3 nanos C2HC-type zinc finger 3 involved_in IDA (PMID:24736845) BHF-UCL PMID:24736845 NCBI chr19:13,862,036...13,880,757
Ensembl chr19:13,862,063...13,880,757
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 8:100,702,916...100,722,088
Ensembl chr 8:100,685,816...100,722,809
JBrowse link
G TNRC6B trinucleotide repeat containing adaptor 6B involved_in IMP (PMID:19716330) UniProt PMID:19716330 NCBI chr22:40,044,834...40,335,808
Ensembl chr22:40,044,817...40,335,808
JBrowse link
G TNRC6C trinucleotide repeat containing adaptor 6C involved_in IDA (PMID:21984185) UniProt PMID:21984185 NCBI chr17:77,957,557...78,108,835
Ensembl chr17:77,958,703...78,108,822
JBrowse link
G TOB1 transducer of ERBB2, 1 involved_in IDA (PMID:21336257) UniProt PMID:21336257 NCBI chr17:50,862,223...50,867,978
Ensembl chr17:50,862,223...50,867,978
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in ISS
IEA
IDA
(PMID:12748283) UniProt
Ensembl
PMID:12748283 GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 NCBI chr14:68,787,655...68,796,243
Ensembl chr14:68,787,660...68,796,253
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:43,222,402...43,226,606
Ensembl chr 2:43,222,402...43,226,606
JBrowse link
positive regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO2 argonaute RISC catalytic component 2 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:140,520,156...140,642,313
Ensembl chr 8:140,520,156...140,635,633
JBrowse link
G BTG2 BTG anti-proliferation factor 2 acts_upstream_of_or_within IDA (PMID:18337750) MGI PMID:18337750 NCBI chr 1:203,305,519...203,309,602
Ensembl chr 1:203,305,491...203,309,602
JBrowse link
G CNOT1 CCR4-NOT transcription complex subunit 1 involved_in IDA
IMP
(PMID:23644599)
(PMID:21278420)
BHF-UCL
UniProt
PMID:21278420 PMID:23644599 NCBI chr16:58,519,951...58,629,826
Ensembl chr16:58,519,951...58,629,885
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IMP
IEA
(PMID:21278420) UniProt
Ensembl
PMID:21278420 GO_REF:0000107 NCBI chr 8:17,224,966...17,246,857
Ensembl chr 8:17,224,966...17,246,878
JBrowse link
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in IDA (PMID:21336257) UniProt PMID:21336257 NCBI chr10:92,046,692...92,291,233
Ensembl chr10:92,046,692...92,291,078
JBrowse link
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in IDA (PMID:32354837) UniProt PMID:32354837 NCBI chr22:31,436,963...31,493,568
Ensembl chr22:31,436,977...31,496,108
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 8:100,702,916...100,722,088
Ensembl chr 8:100,685,816...100,722,809
JBrowse link
G POLR2G RNA polymerase II subunit G involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr11:62,761,580...62,766,710
Ensembl chr11:62,761,565...62,766,710
JBrowse link
G TNRC6A trinucleotide repeat containing adaptor 6A involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr16:24,610,205...24,826,218
Ensembl chr16:24,610,209...24,827,632
JBrowse link
G TNRC6B trinucleotide repeat containing adaptor 6B involved_in IMP
IEA
IBA
(PMID:19716330) UniProt
TreeGrafter
GO_Central
PMID:19716330 GO_REF:0000033 GO_REF:0000118 NCBI chr22:40,044,834...40,335,808
Ensembl chr22:40,044,817...40,335,808
JBrowse link
G TNRC6C trinucleotide repeat containing adaptor 6C involved_in IDA
IBA
IEA
(PMID:21984185) UniProt
GO_Central
TreeGrafter
PMID:21984185 GO_REF:0000033 GO_REF:0000118 NCBI chr17:77,957,557...78,108,835
Ensembl chr17:77,958,703...78,108,822
JBrowse link
G TOB1 transducer of ERBB2, 1 involved_in IDA (PMID:21336257) UniProt PMID:21336257 NCBI chr17:50,862,223...50,867,978
Ensembl chr17:50,862,223...50,867,978
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA
IDA
(PMID:10330172) Ensembl
UniProt
PMID:10330172 GO_REF:0000107 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412
JBrowse link
regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAPRIN1 cell cycle associated protein 1 involved_in IDA (PMID:31439799) UniProt PMID:31439799 NCBI chr11:34,051,731...34,102,610
Ensembl chr11:34,051,731...34,102,610
JBrowse link
regulation of mitochondrial mRNA stability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FASTK Fas activated serine/threonine kinase involved_in IEA
IBA
InterPro
GO_Central
TreeGrafter
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:151,076,624...151,080,809
Ensembl chr 7:151,076,624...151,080,866
JBrowse link
G FASTKD1 FAST kinase domains 1 involved_in IEA
IBA
IMP
(PMID:28335001) InterPro
GO_Central
TreeGrafter
UniProt
PMID:28335001 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:169,528,508...169,573,865
Ensembl chr 2:169,528,508...169,573,875
JBrowse link
G FASTKD2 FAST kinase domains 2 involved_in IEA
IBA
InterPro
GO_Central
TreeGrafter
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:206,765,606...206,796,189
Ensembl chr 2:206,765,357...206,796,189
JBrowse link
G FASTKD3 FAST kinase domains 3 involved_in IDA
IEA
IBA
(PMID:27789713) UniProt
TreeGrafter
GO_Central
InterPro
PMID:27789713 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 5:7,859,159...7,869,031
Ensembl chr 5:7,859,159...7,869,037
JBrowse link
G FASTKD5 FAST kinase domains 5 involved_in IEA
IBA
InterPro
GO_Central
TreeGrafter
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr20:3,146,519...3,159,865
Ensembl chr20:3,146,519...3,159,865
JBrowse link
G PDE12 phosphodiesterase 12 involved_in IMP (PMID:21666256) UniProt PMID:21666256 NCBI chr 3:57,556,274...57,656,495
Ensembl chr 3:57,556,274...57,566,848
JBrowse link
G TBRG4 transforming growth factor beta regulator 4 involved_in IMP
IEA
IBA
(PMID:28335001) UniProt
TreeGrafter
GO_Central
InterPro
PMID:28335001 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:45,100,100...45,111,697
Ensembl chr 7:45,100,100...45,112,047
JBrowse link
regulation of mRNA stability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 involved_in ISO
IEA
RGD
Ensembl
PMID:26846850 GO_REF:0000107 RGD:11526737 NCBI chr 1:35,869,761...35,930,532
Ensembl chr 1:35,869,808...35,930,532
JBrowse link
G AGO2 argonaute RISC catalytic component 2 ISO RGD PMID:26846850 RGD:11526737 NCBI chr 8:140,520,156...140,642,313
Ensembl chr 8:140,520,156...140,635,633
JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in TAS Reactome Reactome:R-HSA-450385 Reactome:R-HSA-450604 NCBI chr14:104,769,349...104,795,748
Ensembl chr14:104,769,349...104,795,751
JBrowse link
G ALKBH5 alkB homolog 5, RNA demethylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:18,183,828...18,209,954
Ensembl chr17:18,183,078...18,209,954
JBrowse link
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in IMP (PMID:19401441) UniProt PMID:19401441 NCBI chr14:20,455,226...20,457,767
Ensembl chr14:20,455,191...20,457,772
JBrowse link
G BRF1 BRF1 RNA polymerase III transcription initiation factor subunit acts_upstream_of_or_within ISO (MGI:3037407|PMID:14976220) MGI PMID:14976220 MGI:3037407 NCBI chr14:105,209,286...105,315,589
Ensembl chr14:105,209,286...105,315,589
JBrowse link
G CACNG7 calcium voltage-gated channel auxiliary subunit gamma 7 involved_in ISO
IEA
RGD
Ensembl
PMID:18923037 GO_REF:0000107 RGD:13524564 NCBI chr19:53,909,278...53,943,950
Ensembl chr19:53,909,278...53,943,950
JBrowse link
G CALCR calcitonin receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:85609|PMID:9002981) MGI
Ensembl
PMID:9002981 GO_REF:0000107 MGI:85609 NCBI chr 7:93,424,486...93,574,724
Ensembl chr 7:93,424,486...93,574,730
JBrowse link
G CARHSP1 calcium regulated heat stable protein 1 involved_in ISS
IEA
IBA
UniProt
TreeGrafter
GO_Central
Ensembl
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr16:8,852,942...8,869,006
Ensembl chr16:8,852,942...8,869,012
JBrowse link
G CSDC2 cold shock domain containing C2 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr22:41,561,010...41,576,666
Ensembl chr22:41,561,010...41,577,741
JBrowse link
G DCP2 decapping mRNA 2 involved_in IDA (PMID:28002401) UniProt PMID:28002401 NCBI chr 5:112,976,798...113,022,195
Ensembl chr 5:112,976,702...113,022,195
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IMP (PMID:18279852) UniProt PMID:18279852 NCBI chr 3:154,272,546...154,324,487
Ensembl chr 3:154,272,546...154,324,487
JBrowse link
G ELAVL4 ELAV like RNA binding protein 4 involved_in ISO
IEA
RGD
Ensembl
PMID:22736542 GO_REF:0000107 RGD:9586719 NCBI chr 1:50,048,055...50,203,772
Ensembl chr 1:50,024,029...50,203,772
JBrowse link
G FMR1 fragile X messenger ribonucleoprotein 1 involved_in ISS
IEA
IBA
UniProt
TreeGrafter
GO_Central
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:147,911,919...147,951,125
Ensembl chr  X:147,911,919...147,951,125
JBrowse link
G FXR1 FMR1 autosomal homolog 1 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 3:180,912,670...180,982,753
Ensembl chr 3:180,868,141...180,982,753
JBrowse link
G FXR2 FMR1 autosomal homolog 2 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr17:7,591,230...7,614,897
Ensembl chr17:7,591,230...7,614,897
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3037407|PMID:14976220) MGI
Ensembl
PMID:14976220 GO_REF:0000107 MGI:3037407 NCBI chr 4:82,352,498...82,373,991
Ensembl chr 4:82,352,498...82,374,503
JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in IDA (PMID:16126846) UniProt PMID:16126846 NCBI chr19:6,413,102...6,424,811
Ensembl chr19:6,413,102...6,424,811
JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 involved_in TAS Reactome Reactome:R-HSA-450385 Reactome:R-HSA-450513 NCBI chr 1:206,684,905...206,734,281
Ensembl chr 1:206,684,905...206,734,281
JBrowse link
G NORAD non-coding RNA activated by DNA damage involved_in TAS (PMID:31048766) ARUK-UCL PMID:31048766 NCBI chr20:36,045,618...36,050,960
Ensembl chr20:36,045,618...36,051,018
JBrowse link
G PABPC4 poly(A) binding protein cytoplasmic 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5585232|PMID:24469397) MGI
Ensembl
PMID:24469397 GO_REF:0000107 MGI:5585232 NCBI chr 1:39,560,816...39,576,790
Ensembl chr 1:39,560,709...39,576,790
JBrowse link
G PCBP4 poly(rC) binding protein 4 acts_upstream_of_or_within IDA (PMID:20817677) MGI PMID:20817677 NCBI chr 3:51,957,454...51,967,466
Ensembl chr 3:51,957,454...51,974,016
JBrowse link
G PCID2 PCI domain containing 2 involved_in IMP (PMID:20870947) UniProt PMID:20870947 NCBI chr13:113,165,002...113,208,669
Ensembl chr13:113,177,536...113,208,715
JBrowse link
G PIAS4 protein inhibitor of activated STAT 4 involved_in IDA (PMID:34048572) UniProt PMID:34048572 NCBI chr19:4,007,736...4,039,386
Ensembl chr19:4,007,736...4,039,386
JBrowse link
G PRKCA protein kinase C alpha involved_in TAS Reactome Reactome:R-HSA-450520 NCBI chr17:66,302,613...66,810,743
Ensembl chr17:66,302,613...66,810,743
JBrowse link
G PRKCD protein kinase C delta involved_in TAS Reactome Reactome:R-HSA-450520 NCBI chr 3:53,161,209...53,192,717
Ensembl chr 3:53,156,009...53,192,717
JBrowse link
G PUM1 pumilio RNA binding family member 1 involved_in IDA
IBA
IEA
(PMID:26724866) UniProt
GO_Central
TreeGrafter
PMID:26724866 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:30,931,506...31,065,717
Ensembl chr 1:30,931,506...31,065,991
JBrowse link
G PUM2 pumilio RNA binding family member 2 involved_in IDA
IEA
IBA
(PMID:26724866) UniProt
TreeGrafter
GO_Central
PMID:26724866 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:20,248,691...20,352,253
Ensembl chr 2:20,248,691...20,352,234
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:17,281,361...17,293,871
Ensembl chr 6:17,281,361...17,293,871
JBrowse link
G RBM33 RNA binding motif protein 33 involved_in IDA (PMID:37257451) UniProt PMID:37257451 NCBI chr 7:155,644,661...155,781,480
Ensembl chr 7:155,644,451...155,781,485
JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in ISS
IEA
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:173,931,084...174,022,357
Ensembl chr 1:173,931,084...174,022,357
JBrowse link
G RNASEL ribonuclease L acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5543366|PMID:22441668) MGI
Ensembl
PMID:22441668 GO_REF:0000107 MGI:5543366 NCBI chr 1:182,573,634...182,589,256
Ensembl chr 1:182,573,634...182,589,256
JBrowse link
G SAMD4A sterile alpha motif domain containing 4A involved_in IEA InterPro GO_REF:0000002 NCBI chr14:54,565,316...54,793,315
Ensembl chr14:54,566,117...54,793,315
JBrowse link
G SAMD4B sterile alpha motif domain containing 4B involved_in IEA InterPro GO_REF:0000002 NCBI chr19:39,342,421...39,390,764
Ensembl chr19:39,342,421...39,385,710
JBrowse link
G SCGB1A1 secretoglobin family 1A member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3615741|PMID:15356574) MGI
Ensembl
PMID:15356574 GO_REF:0000107 MGI:3615741 NCBI chr11:62,419,033...62,423,195
Ensembl chr11:62,405,103...62,423,195
JBrowse link
G SENP1 SUMO specific peptidase 1 involved_in IDA (PMID:34048572) UniProt PMID:34048572 NCBI chr12:48,042,897...48,106,079
Ensembl chr12:48,039,784...48,106,079
JBrowse link
G SERBP1 SERPINE1 mRNA binding protein 1 involved_in NAS (PMID:11001948) HGNC-UCL PMID:11001948 NCBI chr 1:67,407,810...67,430,402
Ensembl chr 1:67,407,810...67,430,415
JBrowse link
G VIM vimentin involved_in IMP (PMID:21746880) UniProt PMID:21746880 NCBI chr10:17,228,241...17,237,593
Ensembl chr10:17,228,241...17,237,593
JBrowse link
G YTHDC1 YTH N6-methyladenosine RNA binding protein C1 involved_in IEA UniProt GO_REF:0000104 NCBI chr 4:68,310,387...68,350,090
Ensembl chr 4:68,310,387...68,350,090
JBrowse link
G YTHDF1 YTH N6-methyladenosine RNA binding protein F1 involved_in IDA
IEA
(PMID:32492408) UniProt PMID:32492408 GO_REF:0000104 NCBI chr20:63,195,429...63,216,131
Ensembl chr20:63,195,429...63,216,139
JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein F2 involved_in IMP
IEA
IDA
(PMID:24284625), (PMID:26046440)
(PMID:32492408)
UniProt
Ensembl
PMID:24284625 PMID:26046440 PMID:32492408 GO_REF:0000104 GO_REF:0000107 NCBI chr 1:28,736,624...28,769,775
Ensembl chr 1:28,736,621...28,769,775
JBrowse link
G YTHDF3 YTH N6-methyladenosine RNA binding protein F3 involved_in IDA
IEA
IMP
(PMID:32492408)
(PMID:32194978)
UniProt
Ensembl
PMID:32194978 PMID:32492408 GO_REF:0000104 GO_REF:0000107 NCBI chr 8:63,168,553...63,212,788
Ensembl chr 8:63,168,553...63,212,786
JBrowse link
G ZC3H14 zinc finger CCCH-type containing 14 involved_in IEA
IBA
InterPro
GO_Central
TreeGrafter
UniProt
GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr14:88,563,037...88,627,596
Ensembl chr14:88,562,970...88,627,596
JBrowse link
G ZFP36 ZFP36 ring finger protein acts_upstream_of_or_within
involved_in
ISO
IEA
IMP
IDA
(MGI:3511379|PMID:15467755)
(PMID:15187101), (PMID:15634918)
(PMID:11719186), (PMID:15687258), (PMID:20702587), (PMID:9703499)
MGI
UniProt
Ensembl
PMID:9703499 PMID:11719186 PMID:15187101 PMID:15467755 PMID:15634918 More... GO_REF:0000104 GO_REF:0000107 MGI:3511379 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in
acts_upstream_of_or_within
IDA
IEA
IMP
(PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:20702587), (PMID:24700863), (PMID:25014217), (PMID:26542173)
(PMID:12198173), (PMID:25106868)
(PMID:15467755)
UniProt
Ensembl
MGI
PMID:12198173 PMID:15467755 PMID:15538381 PMID:15687258 PMID:18326031 More... GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 NCBI chr14:68,787,655...68,796,243
Ensembl chr14:68,787,660...68,796,253
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
IMP
(MGI:3511379|PMID:15467755)
(PMID:25106868)
MGI
UniProt
Ensembl
PMID:15467755 PMID:25106868 GO_REF:0000024 GO_REF:0000107 GO_REF:0000117 MGI:3511379 NCBI chr 2:43,222,402...43,226,606
Ensembl chr 2:43,222,402...43,226,606
JBrowse link
regulation of mRNA stability involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPM1 nucleophosmin 1 involved_in IMP (PMID:12080348) UniProt PMID:12080348 NCBI chr 5:171,387,116...171,410,900
Ensembl chr 5:171,387,116...171,411,810
JBrowse link
regulation of mRNA stability involved in response to stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 involved_in IMP (PMID:17101699) UniProt PMID:17101699 NCBI chr17:48,996,558...49,056,145
Ensembl chr17:48,997,385...49,056,145
JBrowse link
regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RC3H1 ring finger and CCCH-type domains 1 involved_in IMP (PMID:31636267) UniProt PMID:31636267 NCBI chr 1:173,931,084...174,022,357
Ensembl chr 1:173,931,084...174,022,357
JBrowse link
regulation of rRNA stability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDX49 DEAD-box helicase 49 involved_in IMP (PMID:29618122) CACAO PMID:29618122 NCBI chr19:18,919,715...18,928,630
Ensembl chr19:18,919,705...18,929,189
JBrowse link
RNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DXO decapping exoribonuclease involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:31,969,815...31,972,138
Ensembl chr 6:31,969,810...31,972,290
JBrowse link
G LIN28B lin-28 homolog B involved_in IDA (PMID:18951094) CACAO PMID:18951094 NCBI chr 6:104,937,026...105,083,332
Ensembl chr 6:104,936,616...105,083,332
JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2152007|PMID:11588035) MGI
Ensembl
PMID:11588035 GO_REF:0000107 MGI:2152007 NCBI chr 1:12,166,991...12,209,220
Ensembl chr 1:12,166,991...12,209,228
JBrowse link
G ZC3H18 zinc finger CCCH-type containing 18 involved_in IMP (PMID:28297668) FlyBase PMID:28297668 NCBI chr16:88,570,403...88,631,964
Ensembl chr16:88,570,403...88,631,964
JBrowse link
G ZFP36 ZFP36 ring finger protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2152007|PMID:11588035) MGI
Ensembl
PMID:11588035 GO_REF:0000107 MGI:2152007 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412
JBrowse link
RNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NAF1 nuclear assembly factor 1 ribonucleoprotein involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 4:163,103,929...163,166,890
Ensembl chr 4:163,110,073...163,166,890
JBrowse link
G PHAX phosphorylated adaptor for RNA export involved_in IMP (PMID:28297668) FlyBase PMID:28297668 NCBI chr 5:126,600,947...126,627,252
Ensembl chr 5:126,600,925...126,627,252
JBrowse link
G SGMS1-AS1 SGMS1 antisense RNA 1 acts_upstream_of_or_within ISO (MGI:5516374|PMID:24101522) MGI PMID:24101522 MGI:5516374 NCBI chr10:50,624,951...50,631,636
Ensembl chr10:50,623,466...50,641,451
JBrowse link
G ZCCHC17 zinc finger CCHC-type containing 17 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr 1:31,297,032...31,364,936
Ensembl chr 1:31,296,982...31,364,953
JBrowse link
siRNA-mediated gene silencing by mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 NOT|involved_in IDA (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 1:35,869,761...35,930,532
Ensembl chr 1:35,869,808...35,930,532
JBrowse link
G AGO2 argonaute RISC catalytic component 2 involved_in IMP
IDA
(PMID:22795694)
(PMID:15260970)
BHF-UCL PMID:15260970 PMID:22795694 NCBI chr 8:140,520,156...140,642,313
Ensembl chr 8:140,520,156...140,635,633
JBrowse link
G AGO3 argonaute RISC catalytic component 3 NOT|involved_in IDA (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 1:35,930,718...36,072,500
Ensembl chr 1:35,930,718...36,072,500
JBrowse link
G AGO4 argonaute RISC component 4 NOT|involved_in IDA (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 1:35,807,636...35,857,890
Ensembl chr 1:35,808,016...35,857,890
JBrowse link
telomerase RNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX36 DEAH-box helicase 36 involved_in IDA (PMID:22238380) BHF-UCL PMID:22238380 NCBI chr 3:154,272,546...154,324,487
Ensembl chr 3:154,272,546...154,324,487
JBrowse link
G DKC1 dyskerin pseudouridine synthase 1 involved_in IMP (PMID:25467444), (PMID:26950371) BHF-UCL PMID:25467444 PMID:26950371 NCBI chr  X:154,762,864...154,777,689
Ensembl chr  X:154,762,742...154,777,689
JBrowse link
G NAF1 nuclear assembly factor 1 ribonucleoprotein involved_in IMP (PMID:27510903) BHF-UCL PMID:27510903 NCBI chr 4:163,103,929...163,166,890
Ensembl chr 4:163,110,073...163,166,890
JBrowse link
G PARN poly(A)-specific ribonuclease involved_in IMP (PMID:26482878), (PMID:26950371) BHF-UCL PMID:26482878 PMID:26950371 NCBI chr16:14,435,701...14,630,260
Ensembl chr16:14,435,700...14,632,728
JBrowse link
tRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANG angiogenin involved_in ISO (MGI:6713610|PMID:33986151) UniProt PMID:33986151 MGI:6713610 NCBI chr14:20,684,177...20,694,186
Ensembl chr14:20,684,177...20,698,971
JBrowse link
tRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G METTL1 methyltransferase 1, tRNA methylguanosine involved_in IDA (PMID:36599982), (PMID:36599985) UniProt PMID:36599982 PMID:36599985 NCBI chr12:57,768,471...57,772,105
Ensembl chr12:57,768,471...57,772,119
JBrowse link
G NSUN2 NOP2/Sun RNA methyltransferase 2 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:6,599,239...6,633,044
Ensembl chr 5:6,599,239...6,633,291
JBrowse link
G TRDMT1 tRNA aspartic acid methyltransferase 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr10:17,137,336...17,201,672
Ensembl chr10:17,137,336...17,202,054
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19761
    biological regulation 13391
      regulation of biological quality 3488
        regulation of RNA stability 327
          RNA destabilization + 234
          RNA stabilization + 83
          regulation of mRNA stability + 312
          regulation of rRNA stability + 1
          regulation of tRNA stability + 4
Path 2
Term Annotations click to browse term
  biological_process 19761
    biological regulation 13391
      regulation of biological process 13022
        regulation of metabolic process 7349
          regulation of biosynthetic process 6140
            regulation of cellular biosynthetic process 6092
              regulation of macromolecule biosynthetic process 5947
                regulation of gene expression 5829
                  post-transcriptional regulation of gene expression 1180
                    regulation of RNA stability 327
                      RNA destabilization + 234
                      RNA stabilization + 83
                      regulation of mRNA stability + 312
                      regulation of rRNA stability + 1
                      regulation of tRNA stability + 4
paths to the root