ONTOLOGY REPORT - ANNOTATIONS |
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Term: | regulation of RNA stability |
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Accession: | GO:0043487
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browse the term
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Definition: | Any process that modulates the propensity of RNA molecules to degradation. Includes processes that both stabilize and destabilize RNAs. |
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Nlrp5 |
NLR family, pyrin domain containing 5 |
acts_upstream_of_or_within |
ISO |
MGI:2178449 (MGI:1926689|PMID:11062459) |
RGD |
PMID:11062459 |
MGI:1926689 |
NCBI chr 1:67,778,037...67,810,946
Ensembl chr 1:67,777,948...68,023,736
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Cpeb3 |
cytoplasmic polyadenylation element binding protein 3 |
involved_in |
ISO |
(PMID:21336257) |
RGD |
PMID:21336257 |
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NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560
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Dhx36 |
DEAH-box helicase 36 |
involved_in |
ISO ISS |
(PMID:26489465) GO_REF:0000024 |
RGD UniProt |
PMID:26489465 |
GO_REF:0000024 |
NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
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Dnd1 |
DND microRNA-mediated repression inhibitor 1 |
involved_in |
ISO |
(PMID:28297718) |
RGD |
PMID:28297718 |
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NCBI chr18:28,378,692...28,381,316
Ensembl chr18:28,378,692...28,381,316
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Hnrnpd |
heterogeneous nuclear ribonucleoprotein D |
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IMP |
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RGD |
PMID:20805360 |
RGD:10042974 |
NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
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Khsrp |
KH-type splicing regulatory protein |
involved_in |
ISO ISS |
(PMID:16126846), (PMID:28275056) GO_REF:0000024 |
RGD UniProt |
PMID:16126846 PMID:28275056 |
GO_REF:0000024 |
NCBI chr 9:1,862,555...1,872,301
Ensembl chr 9:1,862,899...1,872,451
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Mov10 |
Mov10 RISC complex RNA helicase |
involved_in |
ISO |
(PMID:24726324) |
RGD |
PMID:24726324 |
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NCBI chr 2:192,292,041...192,315,142
Ensembl chr 2:192,293,470...192,315,083
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Plekhn1 |
pleckstrin homology domain containing N1 |
involved_in |
IBA ISO |
PMID:21873635 (MGI:6105829|PMID:27616329) (PMID:29180010) |
RGD |
PMID:27616329 PMID:29180010 PMID:21873635 |
MGI:6105829, RGD:13792537 |
NCBI chr 5:166,805,309...166,813,339
Ensembl chr 5:166,804,837...166,813,155
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Qki |
QKI, KH domain containing RNA binding |
acts_upstream_of_or_within |
ISO |
(MGI:5316962|PMID:20631256) |
RGD |
PMID:20631256 |
MGI:5316962 |
NCBI chr 1:50,387,698...50,501,568
Ensembl chr 1:50,387,698...50,498,831
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Rbm24 |
RNA binding motif protein 24 |
involved_in |
ISO |
(PMID:24375645) |
RGD |
PMID:24375645 |
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NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
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Rc3h1 |
ring finger and CCCH-type domains 1 |
involved_in |
ISO |
(MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671) |
RGD |
PMID:26000482 PMID:26255671 |
MGI:5706859 MGI:5751631 |
NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
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Tardbp |
TAR DNA binding protein |
involved_in |
ISO |
(PMID:28335005) |
RGD |
PMID:28335005 |
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NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055
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Trim71 |
tripartite motif containing 71 |
involved_in |
ISO |
(PMID:23125361) |
RGD |
PMID:23125361 |
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NCBI chr 8:114,193,439...114,250,807
Ensembl chr 8:114,199,187...114,250,807
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Upf1 |
UPF1, RNA helicase and ATPase |
involved_in |
ISO |
(PMID:24726324), (PMID:26255671) |
RGD |
PMID:24726324 PMID:26255671 |
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NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568
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Zc3h12a |
zinc finger CCCH type containing 12A |
involved_in |
ISS ISO IBA |
GO_REF:0000024 (MGI:3842851|PMID:19322177), (MGI:5706859|PMID:26000482), (MGI:5706909|PMID:23185455), (MGI:5707103|PMID:26134560), (MGI:5751631|PMID:26255671) PMID:21873635 (PMID:19909337) |
UniProt RGD |
PMID:19322177 PMID:19909337 PMID:23185455 PMID:26000482 PMID:26134560 PMID:26255671 PMID:21873635 More...
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GO_REF:0000024 MGI:3842851 MGI:5706859 MGI:5706909 MGI:5707103 MGI:5751631, RGD:13792537 |
NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
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Zc3h12d |
zinc finger CCCH type containing 12D |
involved_in |
ISO |
(MGI:5707103|PMID:26134560) |
RGD |
PMID:26134560 |
MGI:5707103 |
NCBI chr 1:2,313,110...2,348,820
Ensembl chr 1:2,314,324...2,348,819
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Zfp36 |
zinc finger protein 36 |
involved_in |
IEA ISS ISO |
GO_REF:0000107 GO_REF:0000024 (MGI:5784976|PMID:22701344), (MGI:5788345|PMID:27193233), (MGI:5795824|PMID:17288565) (PMID:11719186), (PMID:14679154), (PMID:15187101), (PMID:15634918), (PMID:15687258), (PMID:15766526), (PMID:20221403), (PMID:27193233), (PMID:9703499) |
Ensembl UniProt RGD |
PMID:9703499 PMID:11719186 PMID:14679154 PMID:15187101 PMID:15634918 PMID:15687258 PMID:15766526 PMID:17288565 PMID:20221403 PMID:22701344 PMID:27193233 More...
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GO_REF:0000024 GO_REF:0000107 MGI:5784976 MGI:5788345 MGI:5795824 |
NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
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Zfp36l1 |
zinc finger protein 36, C3H type-like 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:4818820|PMID:20622884), (MGI:5779430|PMID:27102483), (MGI:5784967|PMID:24733888), (MGI:5784968|PMID:24700863), (MGI:5784976|PMID:22701344) (PMID:12198173), (PMID:15467755), (PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:24700863), (PMID:25014217), (PMID:25106868), (PMID:26542173) |
UniProt RGD |
PMID:12198173 PMID:15467755 PMID:15538381 PMID:15687258 PMID:18326031 PMID:19179481 PMID:20622884 PMID:22701344 PMID:24700863 PMID:24733888 PMID:25014217 PMID:25106868 PMID:26542173 PMID:27102483 More...
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GO_REF:0000024 MGI:4818820 MGI:5779430 MGI:5784967 MGI:5784968 MGI:5784976 |
NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
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Zfp36l2 |
zinc finger protein 36, C3H type-like 2 |
involved_in |
ISO |
(PMID:25106868) (MGI:4818820|PMID:20622884), (MGI:5784976|PMID:22701344) |
RGD |
PMID:20622884 PMID:22701344 PMID:25106868 |
MGI:4818820 MGI:5784976 |
NCBI chr 6:10,490,032...10,494,073
Ensembl chr 6:10,490,032...10,494,064
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Angel2 |
angel homolog 2 |
involved_in |
ISO IBA |
(PMID:22547059) PMID:21873635 |
RGD |
PMID:22547059 PMID:21873635 |
RGD:13792537 |
NCBI chr13:102,509,111...102,529,501
Ensembl chr13:102,510,589...102,529,493
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Boll |
boule homolog, RNA binding protein |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 9:56,734,890...56,859,917
Ensembl chr 9:56,733,584...56,859,916
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Dazl |
deleted in azoospermia-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 9:10,695,572...10,712,443
Ensembl chr 9:10,695,592...10,712,323
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Elavl1 |
ELAV like RNA binding protein 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6105829|PMID:27616329) (PMID:14517288), (PMID:19029303), (PMID:26489465), (PMID:29180010) |
UniProt RGD |
PMID:14517288 PMID:19029303 PMID:26489465 PMID:27616329 PMID:29180010 |
GO_REF:0000024 MGI:6105829 |
NCBI chr12:2,640,936...2,684,787
Ensembl chr12:2,645,061...2,684,784
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Elavl4 |
ELAV like RNA binding protein 4 |
involved_in |
ISO ISS |
(PMID:12034726) GO_REF:0000024 |
RGD UniProt |
PMID:12034726 |
GO_REF:0000024 |
NCBI chr 5:125,056,848...125,200,543
Ensembl chr 5:125,056,848...125,200,446
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Hnrnpa0 |
heterogeneous nuclear ribonucleoprotein A0 |
involved_in |
ISO IBA |
(MGI:5306322|PMID:12456657) PMID:21873635 |
RGD |
PMID:12456657 PMID:21873635 |
MGI:5306322, RGD:13792537 |
NCBI chr17:6,507,413...6,509,373
Ensembl chr17:6,507,275...6,509,375
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Hnrnpc |
heterogeneous nuclear ribonucleoprotein C |
involved_in |
ISO |
(PMID:16010978) |
RGD |
PMID:16010978 |
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NCBI chr15:24,779,593...24,809,213
Ensembl chr15:24,779,450...24,809,183
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Mapkapk2 |
MAPK activated protein kinase 2 |
involved_in |
ISO |
(PMID:14517288), (PMID:15014438), (PMID:20932473) |
RGD |
PMID:14517288 PMID:15014438 PMID:20932473 |
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NCBI chr13:42,513,762...42,560,061
Ensembl chr13:42,513,762...42,560,457
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Myd88 |
MYD88, innate immune signal transduction adaptor |
involved_in |
ISO |
(PMID:15294994) |
RGD |
PMID:15294994 |
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NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
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Ptbp1 |
polypyrimidine tract binding protein 1 |
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IDA |
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RGD |
PMID:11696543 |
RGD:10045987 |
NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397
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Rbm10 |
RNA binding motif protein 10 |
acts_upstream_of_or_within |
ISO |
(MGI:4367529|PMID:19508861) |
RGD |
PMID:19508861 |
MGI:4367529 |
NCBI chr X:1,540,399...1,572,571
Ensembl chr X:1,540,398...1,572,575
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Rbm38 |
RNA binding motif protein 38 |
involved_in |
ISO |
(PMID:17050675) |
RGD |
PMID:17050675 |
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NCBI chr 3:161,801,550...161,814,381
Ensembl chr 3:161,801,577...161,814,381
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Tardbp |
TAR DNA binding protein |
involved_in |
ISO |
(PMID:17481916) |
RGD |
PMID:17481916 |
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NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055
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Tirap |
TIR domain containing adaptor protein |
involved_in |
ISO |
(PMID:15294994) |
RGD |
PMID:15294994 |
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NCBI chr 8:33,531,724...33,548,508
Ensembl chr 8:33,531,725...33,547,432
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Zfp36 |
zinc finger protein 36 |
involved_in |
ISO ISS |
(PMID:15014438) GO_REF:0000024 |
RGD UniProt |
PMID:15014438 |
GO_REF:0000024 |
NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
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Csde1 |
cold shock domain containing E1 |
involved_in |
ISO |
(PMID:11051545) |
RGD |
PMID:11051545 |
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NCBI chr 2:190,546,015...190,582,790
Ensembl chr 2:190,554,980...190,582,784
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Dhx9 |
DExH-box helicase 9 |
involved_in |
ISO |
(PMID:19029303) |
RGD |
PMID:19029303 |
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NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
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Hnrnpd |
heterogeneous nuclear ribonucleoprotein D |
involved_in |
ISO |
(PMID:11051545) |
RGD |
PMID:11051545 |
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NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
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Hnrnpu |
heterogeneous nuclear ribonucleoprotein U |
involved_in |
IEA ISO IBA |
GO_REF:0000107 (PMID:19029303) PMID:21873635 |
Ensembl RGD |
PMID:19029303 PMID:21873635 |
GO_REF:0000107, RGD:13792537 |
NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
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Igf2bp1 |
insulin-like growth factor 2 mRNA binding protein 1 |
involved_in |
ISO ISS |
(PMID:19029303) (PMID:19029303), (PMID:29476152) GO_REF:0000024 |
RGD UniProt |
PMID:19029303 PMID:29476152 |
GO_REF:0000024 |
NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129
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Igf2bp2 |
insulin-like growth factor 2 mRNA binding protein 2 |
involved_in |
ISO |
(PMID:29476152) |
RGD |
PMID:29476152 |
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NCBI chr11:78,874,402...78,974,392
Ensembl chr11:78,874,414...78,974,377
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Igf2bp3 |
insulin-like growth factor 2 mRNA binding protein 3 |
involved_in |
ISO |
(PMID:29476152) |
RGD |
PMID:29476152 |
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NCBI chr 4:78,060,494...78,195,007
Ensembl chr 4:78,060,494...78,194,865
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Pabpc1 |
poly(A) binding protein, cytoplasmic 1 |
involved_in |
ISO |
(PMID:11051545) |
RGD |
PMID:11051545 |
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NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744
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Paip1 |
poly(A) binding protein interacting protein 1 |
involved_in |
ISO |
(PMID:11051545) |
RGD |
PMID:11051545 |
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NCBI chr 2:51,523,142...51,550,241
Ensembl chr 2:51,522,921...51,550,241
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Syncrip |
synaptotagmin binding, cytoplasmic RNA interacting protein |
involved_in |
IBA IEA ISO |
PMID:21873635 GO_REF:0000107 (PMID:11051545), (PMID:19029303) |
Ensembl RGD |
PMID:11051545 PMID:19029303 PMID:21873635 |
GO_REF:0000107, RGD:13792537 |
NCBI chr 8:89,402,487...89,435,517
Ensembl chr 8:89,402,866...89,435,515
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Ybx1 |
Y box binding protein 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:19029303) |
UniProt RGD |
PMID:19029303 |
GO_REF:0000024 |
NCBI chr 5:132,882,137...132,899,108
Ensembl chr 5:132,882,145...132,898,862
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Cnot7 |
CCR4-NOT transcription complex, subunit 7 |
acts_upstream_of_or_within |
ISO |
MGI:109382 (MGI:3807625|PMID:18625844) |
RGD |
PMID:18625844 |
MGI:3807625 |
NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576
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Dcp1a |
decapping mRNA 1A |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr16:5,656,788...5,702,151
Ensembl chr16:5,656,773...5,702,140
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Dcp1b |
decapping mRNA 1B |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:152,358,267...152,395,747
Ensembl chr 4:152,358,241...152,397,145
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Dcp2 |
decapping mRNA 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr18:36,750,732...36,787,067
Ensembl chr18:36,750,732...36,788,557
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Dcps |
decapping enzyme, scavenger |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 8:33,468,669...33,524,407
Ensembl chr 8:33,415,671...33,524,389
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LOC103690064 |
m7GpppN-mRNA hydrolase-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
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Lsm1 |
LSM1 homolog, mRNA degradation associated |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr16:66,277,345...66,288,852
Ensembl chr16:66,277,345...66,288,852
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Noct |
nocturnin |
acts_upstream_of_or_within |
ISO |
MGI:1298230 (MGI:3807625|PMID:18625844) |
RGD |
PMID:18625844 |
MGI:3807625 |
NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400
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Pan3 |
poly(A) specific ribonuclease subunit PAN3 |
acts_upstream_of_or_within |
ISO |
(MGI:3807625|PMID:18625844) |
RGD |
PMID:18625844 |
MGI:3807625 |
NCBI chr12:7,476,707...7,595,380
Ensembl chr12:7,476,697...7,599,204
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Patl1 |
PAT1 homolog 1, processing body mRNA decay factor |
involved_in |
ISO IBA ISS |
(PMID:20584987), (PMID:20852261) PMID:21873635 GO_REF:0000024 |
RGD UniProt |
PMID:20584987 PMID:20852261 PMID:21873635 |
GO_REF:0000024, RGD:13792537 |
NCBI chr 1:208,831,115...208,862,904
Ensembl chr 1:208,831,115...208,862,857
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Patl2 |
PAT1 homolog 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:109,072,958...109,087,425
Ensembl chr 3:109,075,290...109,083,253
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Cnot6 |
CCR4-NOT transcription complex, subunit 6 |
involved_in |
ISO IEA ISS |
(PMID:20065043) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:20065043 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr10:33,978,785...34,031,025
Ensembl chr10:33,980,831...34,031,025
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Cnot7 |
CCR4-NOT transcription complex, subunit 7 |
involved_in |
ISO IBA |
(PMID:20065043), (PMID:21336257) PMID:21873635 |
RGD |
PMID:20065043 PMID:21336257 PMID:21873635 |
RGD:13792537 |
NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576
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Cnot8 |
CCR4-NOT transcription complex, subunit 8 |
involved_in |
ISO IBA |
(PMID:20065043) PMID:21873635 |
RGD |
PMID:20065043 PMID:21873635 |
RGD:13792537 |
NCBI chr10:42,281,614...42,294,740
Ensembl chr10:42,281,722...42,294,730
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Exosc2 |
exosome component 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:14,962,930...14,973,645
Ensembl chr 3:14,962,917...14,973,575
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Exosc3 |
exosome component 3 |
involved_in |
ISO IBA |
(PMID:11782436) PMID:21873635 |
RGD |
PMID:11782436 PMID:21873635 |
RGD:13792537 |
NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060
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Exosc5 |
exosome component 5 |
involved_in |
ISO |
(PMID:11782436) |
RGD |
PMID:11782436 |
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NCBI chr 1:81,168,128...81,177,266
Ensembl chr 1:81,166,023...81,177,265
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Exosc7 |
exosome component 7 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 8:122,773,607...122,798,943
Ensembl chr 8:122,773,591...122,799,270
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G |
Exosc8 |
exosome component 8 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:138,930,405...138,937,009
Ensembl chr 2:138,930,405...138,936,928
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G |
Exosc9 |
exosome component 9 |
involved_in |
ISO IBA |
(PMID:11782436) PMID:21873635 |
RGD |
PMID:11782436 PMID:21873635 |
RGD:13792537 |
NCBI chr 2:119,416,028...119,426,981
Ensembl chr 2:119,388,715...119,427,051
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Mirlet7a1 |
microRNA let-7a-1 |
involved_in |
ISO |
(PMID:17671087) |
RGD |
PMID:17671087 |
|
NCBI chr17:16,113,766...16,113,859
Ensembl chr17:16,113,768...16,113,867
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G |
Mirlet7c2 |
microRNA let-7c-2 |
involved_in |
ISO |
(PMID:17671087) |
RGD |
PMID:17671087 |
|
NCBI chr 7:116,803,771...116,803,865
Ensembl chr 7:116,803,771...116,803,865
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G |
Ago1 |
argonaute RISC component 1 |
NOT|involved_in |
ISO |
(PMID:15260970) |
RGD |
PMID:15260970 |
|
NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
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G |
Ago2 |
argonaute RISC catalytic component 2 |
involved_in |
ISO ISS IEA |
(PMID:15260970), (PMID:17524464), (PMID:18771919) (MGI:5616320|PMID:16357216) GO_REF:0000024 GO_REF:0000104 |
RGD UniProt |
PMID:15260970 PMID:16357216 PMID:17524464 PMID:18771919 |
GO_REF:0000024 GO_REF:0000104 MGI:5616320 |
NCBI chr 7:105,018,202...105,105,120
Ensembl chr 7:105,029,120...105,104,974
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G |
Ago3 |
argonaute RISC catalytic component 3 |
NOT|involved_in |
ISO |
(PMID:15260970) |
RGD |
PMID:15260970 |
|
NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230
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G |
Ago4 |
argonaute RISC component 4 |
NOT|involved_in |
ISO |
(PMID:15260970) |
RGD |
PMID:15260970 |
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NCBI chr 5:138,780,450...138,825,889
Ensembl chr 5:138,783,069...138,825,632
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G |
Mir106a |
microRNA 106a |
involved_in |
ISO |
(PMID:26265888) |
RGD |
PMID:26265888 |
|
NCBI chr X:132,422,584...132,422,661
Ensembl chr X:132,422,584...132,422,661
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G |
Mir196a |
microRNA 196a |
acts_upstream_of_or_within |
ISO |
(MGI:3042528|PMID:15105502), (MGI:3510301|PMID:15361871) |
RGD |
PMID:15105502 PMID:15361871 |
MGI:3042528 MGI:3510301 |
NCBI chr 7:134,110,400...134,110,509
Ensembl chr 7:134,110,400...134,110,509
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G |
Mir196b |
microRNA 196b |
acts_upstream_of_or_within |
ISO |
(MGI:3042528|PMID:15105502) |
RGD |
PMID:15105502 |
MGI:3042528 |
NCBI chr 4:81,330,487...81,330,571
Ensembl chr 4:81,330,487...81,330,571
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G |
Mir196c |
microRNA 196c |
acts_upstream_of_or_within |
ISO |
(MGI:3042528|PMID:15105502), (MGI:3510301|PMID:15361871) |
RGD |
PMID:15105502 PMID:15361871 |
MGI:3042528 MGI:3510301 |
NCBI chr10:81,231,006...81,231,085
Ensembl chr10:81,231,006...81,231,085
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G |
Mir223 |
microRNA 223 |
involved_in |
ISO |
(PMID:34637033) |
RGD |
PMID:34637033 |
|
NCBI chr X:61,141,887...61,141,996
Ensembl chr X:61,141,887...61,141,996
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G |
Mir486 |
microRNA 486 |
involved_in |
ISO |
(PMID:25857263) |
RGD |
PMID:25857263 |
|
|
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G |
Mir665 |
microRNA 665 |
involved_in |
ISO |
(PMID:34454184) |
RGD |
PMID:34454184 |
|
NCBI chr 6:128,539,440...128,539,533
Ensembl chr 6:128,539,440...128,539,533
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G |
Mir98 |
microRNA 98 |
involved_in |
ISO |
(PMID:27860183) |
RGD |
PMID:27860183 |
|
NCBI chr X:20,981,235...20,981,342
Ensembl chr X:20,981,235...20,981,342
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G |
Mov10 |
Mov10 RISC complex RNA helicase |
involved_in |
ISO |
(PMID:16289642) |
RGD |
PMID:16289642 |
|
NCBI chr 2:192,292,041...192,315,142
Ensembl chr 2:192,293,470...192,315,083
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G |
Celf1 |
CUGBP, Elav-like family member 1 |
involved_in |
IDA |
PMID:30508596 |
ARUK-UCL |
PMID:30508596 |
RGD:38501076 |
NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426
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G |
Cnot6l |
CCR4-NOT transcription complex, subunit 6-like |
acts_upstream_of_or_within |
ISO |
(MGI:3828348|PMID:17452450) |
RGD |
PMID:17452450 |
MGI:3828348 |
NCBI chr14:13,410,501...13,502,511
Ensembl chr14:13,411,281...13,498,203
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G |
Fto |
FTO, alpha-ketoglutarate dependent dioxygenase |
involved_in |
ISO IEA ISS |
(PMID:28002401), (PMID:30197295) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:28002401 PMID:30197295 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr19:15,284,898...15,692,142
Ensembl chr19:15,349,696...15,692,083
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G |
Gigyf2 |
GRB10 interacting GYF protein 2 |
involved_in |
ISO |
(PMID:27157137) |
RGD |
PMID:27157137 |
|
NCBI chr 9:88,001,212...88,127,040
Ensembl chr 9:88,001,301...88,125,715
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G |
Hnrnpr |
heterogeneous nuclear ribonucleoprotein R |
|
IMP |
|
RGD |
PMID:15798208 |
RGD:9854643 |
NCBI chr 5:148,542,999...148,574,888
Ensembl chr 5:148,543,044...148,574,867
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G |
Mettl14 |
methyltransferase like 14 |
involved_in |
ISO |
(MGI:5559905|PMID:24394384), (MGI:5927282|PMID:28965759) |
RGD |
PMID:24394384 PMID:28965759 |
MGI:5559905 MGI:5927282 |
NCBI chr 2:211,530,598...211,546,858
Ensembl chr 2:211,530,602...211,546,821
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G |
Mettl16 |
methyltransferase like 16 |
involved_in |
ISO |
(MGI:6114846|PMID:29262316) |
RGD |
PMID:29262316 |
MGI:6114846 |
NCBI chr10:59,640,915...59,697,291
Ensembl chr10:59,640,972...59,687,061
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G |
Mettl3 |
methyltransferase-like 3 |
involved_in |
ISO |
(MGI:5559905|PMID:24394384), (MGI:5621227|PMID:25569111), (MGI:5621254|PMID:25456834), (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) |
RGD |
PMID:24394384 PMID:25456834 PMID:25569111 PMID:28637692 PMID:28792938 PMID:28965759 More...
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MGI:5559905 MGI:5621227 MGI:5621254 MGI:5927282 MGI:6094929 MGI:6095345 |
NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041
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G |
Mir144 |
microRNA 144 |
involved_in |
ISO |
MGI:3619412|MGI:5562734 (MGI:6442632|PMID:30971389) |
RGD |
PMID:30971389 |
MGI:6442632 |
NCBI chr10:62,961,348...62,961,430
Ensembl chr10:62,961,348...62,961,430
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G |
Mir451a |
microRNA 451a |
involved_in |
ISO |
MGI:2676829|MGI:5562734 (MGI:6442632|PMID:30971389) |
RGD |
PMID:30971389 |
MGI:6442632 |
NCBI chr10:62,961,520...62,961,591
Ensembl chr10:62,961,520...62,961,591
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G |
Pum1 |
pumilio RNA-binding family member 1 |
involved_in |
ISO |
(MGI:5640888|PMID:25768905) |
RGD |
PMID:25768905 |
MGI:5640888 |
NCBI chr 5:142,836,933...142,954,331
Ensembl chr 5:142,837,127...142,954,039
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G |
Rbm24 |
RNA binding motif protein 24 |
involved_in |
ISO |
(PMID:29104163) |
RGD |
PMID:29104163 |
|
NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
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G |
Rida |
reactive intermediate imine deaminase A homolog |
involved_in |
ISO ISS |
(PMID:30930054) GO_REF:0000024 |
RGD UniProt |
PMID:30930054 |
GO_REF:0000024 |
NCBI chr 7:65,691,429...65,705,257
Ensembl chr 7:65,691,435...65,705,716
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G |
Rock1 |
Rho-associated coiled-coil containing protein kinase 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:6271078|PMID:29353861) |
Ensembl RGD |
PMID:29353861 |
GO_REF:0000107 MGI:6271078 |
NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
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G |
Rock2 |
Rho-associated coiled-coil containing protein kinase 2 |
involved_in |
ISO |
(MGI:6271078|PMID:29353861) |
RGD |
PMID:29353861 |
MGI:6271078 |
NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
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G |
Ythdf1 |
YTH N(6)-methyladenosine RNA binding protein 1 |
involved_in |
ISO |
(PMID:32492408) (MGI:6490006|PMID:32943573) |
RGD |
PMID:32492408 PMID:32943573 |
MGI:6490006 |
NCBI chr 3:168,024,660...168,040,172
Ensembl chr 3:168,024,663...168,040,172
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G |
Ythdf2 |
YTH N(6)-methyladenosine RNA binding protein 2 |
involved_in |
ISO IBA |
(PMID:27558897), (PMID:28106072), (PMID:30559377), (PMID:30930054), (PMID:32169943), (PMID:32492408) PMID:21873635 (MGI:6316439|PMID:29855337), (MGI:6316688|PMID:30065315), (MGI:6317061|PMID:30150673), (MGI:6490006|PMID:32943573), (MGI:6508516|PMID:31959747) |
RGD |
PMID:27558897 PMID:28106072 PMID:29855337 PMID:30065315 PMID:30150673 PMID:30559377 PMID:30930054 PMID:31959747 PMID:32169943 PMID:32492408 PMID:32943573 PMID:21873635 More...
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MGI:6316439 MGI:6316688 MGI:6317061 MGI:6490006 MGI:6508516, RGD:13792537 |
NCBI chr 5:144,381,426...144,407,126
Ensembl chr 5:144,381,431...144,408,144
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G |
Ythdf3 |
YTH N(6)-methyladenosine RNA binding protein 3 |
involved_in |
ISO IBA |
(PMID:28106072), (PMID:32492408) PMID:21873635 (MGI:6490006|PMID:32943573) |
RGD |
PMID:28106072 PMID:32492408 PMID:32943573 PMID:21873635 |
MGI:6490006, RGD:13792537 |
NCBI chr 2:98,350,304...98,384,608
Ensembl chr 2:98,350,588...98,384,606
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G |
Apobec1 |
apolipoprotein B mRNA editing enzyme catalytic subunit 1 |
acts_upstream_of_or_within |
ISO |
(MGI:3057047|PMID:15480992) |
RGD |
PMID:15480992 |
MGI:3057047 |
NCBI chr 4:155,800,030...155,828,515
Ensembl chr 4:155,800,887...155,827,390
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G |
Axin2 |
axin 2 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:17072303) |
Ensembl RGD |
PMID:17072303 |
GO_REF:0000107 |
NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231
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G |
Cirbp |
cold inducible RNA binding protein |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:11574538) |
UniProt RGD |
PMID:11574538 |
GO_REF:0000024 |
NCBI chr 7:9,533,857...9,538,899
Ensembl chr 7:9,424,178...9,538,818
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G |
Dicer1 |
dicer 1 ribonuclease III |
acts_upstream_of_or_within |
ISO |
MGI:3589208 (MGI:5439239|PMID:22844247) |
RGD |
PMID:22844247 |
MGI:5439239 |
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
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G |
Dnd1 |
DND microRNA-mediated repression inhibitor 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr18:28,378,692...28,381,316
Ensembl chr18:28,378,692...28,381,316
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G |
E2f1 |
E2F transcription factor 1 |
involved_in |
ISO |
(PMID:15766563) |
RGD |
PMID:15766563 |
|
NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361
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G |
Eif4enif1 |
eukaryotic translation initiation factor 4E nuclear import factor 1 |
involved_in |
ISO |
(PMID:24335285), (PMID:32354837) |
RGD |
PMID:24335285 PMID:32354837 |
|
NCBI chr14:78,056,115...78,099,846
Ensembl chr14:78,056,297...78,098,793
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G |
Elavl1 |
ELAV like RNA binding protein 1 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 (PMID:21613615) (PMID:19029303), (PMID:31358969) (MGI:3037407|PMID:14976220), (MGI:5287957|PMID:21613615) (MGI:5559905|PMID:24394384), (MGI:5922838|PMID:27609837) |
UniProt RGD |
PMID:14976220 PMID:19029303 PMID:21613615 PMID:24394384 PMID:27609837 PMID:31358969 More...
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GO_REF:0000024 MGI:3037407 MGI:5287957 MGI:5559905 MGI:5922838 |
NCBI chr12:2,640,936...2,684,787
Ensembl chr12:2,645,061...2,684,784
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G |
Fus |
Fus RNA binding protein |
acts_upstream_of_or_within |
ISO |
(PMID:27378374) |
RGD |
PMID:27378374 |
|
NCBI chr 1:182,576,479...182,590,417
Ensembl chr 1:182,576,545...182,590,414
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G |
Gdnf |
glial cell derived neurotrophic factor |
involved_in |
ISO IEA ISS |
(PMID:12358785) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:12358785 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 2:56,893,992...56,919,935
Ensembl chr 2:56,895,010...56,917,209
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G |
Hnrnpd |
heterogeneous nuclear ribonucleoprotein D |
|
IDA |
|
RGD |
PMID:15192077 |
RGD:1357938 |
NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
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G |
Hnrnpu |
heterogeneous nuclear ribonucleoprotein U |
involved_in |
ISO |
(PMID:17174306) |
RGD |
PMID:17174306 |
|
NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
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G |
Ikbke |
inhibitor of nuclear factor kappa B kinase subunit epsilon |
involved_in |
ISO |
MGI:3707541 (MGI:5291883|PMID:21822257) |
RGD |
PMID:21822257 |
MGI:5291883 |
NCBI chr13:42,712,154...42,738,470
Ensembl chr13:42,712,159...42,737,143
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G |
Larp1 |
La ribonucleoprotein 1, translational regulator |
involved_in |
ISO |
(PMID:25940091), (PMID:28673543) |
RGD |
PMID:25940091 PMID:28673543 |
|
NCBI chr10:42,191,378...42,246,361
Ensembl chr10:42,191,325...42,243,371
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G |
Mapkapk2 |
MAPK activated protein kinase 2 |
acts_upstream_of_or_within |
ISO |
MGI:2179724 (MGI:2158083|PMID:11741878) |
RGD |
PMID:11741878 |
MGI:2158083 |
NCBI chr13:42,513,762...42,560,061
Ensembl chr13:42,513,762...42,560,457
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G |
Meioc |
meiosis specific with coiled-coil domain |
involved_in |
IBA ISO |
PMID:21873635 (MGI:5770021|PMID:26742488) |
RGD |
PMID:26742488 PMID:21873635 |
MGI:5770021, RGD:13792537 |
NCBI chr10:87,628,807...87,646,485
Ensembl chr10:87,628,875...87,646,752
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G |
Mtor |
mechanistic target of rapamycin kinase |
|
IMP |
|
RGD |
PMID:21073857 |
RGD:10040969 |
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
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|
G |
Noct |
nocturnin |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5308514|PMID:22073225) |
UniProt RGD |
PMID:22073225 |
GO_REF:0000024 MGI:5308514 |
NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400
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G |
Qki |
QKI, KH domain containing RNA binding |
|
IMP |
|
RGD |
PMID:16855020 |
RGD:10045995 |
NCBI chr 1:50,387,698...50,501,568
Ensembl chr 1:50,387,698...50,498,831
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G |
Rbm10 |
RNA binding motif protein 10 |
|
IMP |
|
RGD |
PMID:19508861 |
RGD:151667451 |
NCBI chr X:1,540,399...1,572,571
Ensembl chr X:1,540,398...1,572,575
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|
G |
Rbm24 |
RNA binding motif protein 24 |
involved_in |
ISO IBA |
(PMID:29104163) PMID:21873635 |
RGD |
PMID:29104163 PMID:21873635 |
RGD:13792537 |
NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
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G |
Rbm38 |
RNA binding motif protein 38 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:161,801,550...161,814,381
Ensembl chr 3:161,801,577...161,814,381
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|
G |
Rbm46 |
RNA binding motif protein 46 |
acts_upstream_of_or_within |
ISO |
(MGI:5644240|PMID:25397698) |
RGD |
PMID:25397698 |
MGI:5644240 |
NCBI chr 2:168,198,324...168,242,011
Ensembl chr 2:168,198,463...168,242,011
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G |
Slc11a1 |
solute carrier family 11 member 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857755 (MGI:85148|PMID:9009318) |
RGD |
PMID:9009318 |
MGI:85148 |
NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101
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G |
Srsf1 |
serine and arginine rich splicing factor 1 |
involved_in |
ISO |
(MGI:5291882|PMID:21822258) |
RGD |
PMID:21822258 |
MGI:5291882 |
NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336
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G |
Taf15 |
TATA-box binding protein associated factor 15 |
acts_upstream_of_or_within |
ISO |
(PMID:27378374) |
RGD |
PMID:27378374 |
|
NCBI chr10:68,272,900...68,304,951
Ensembl chr10:68,272,969...68,304,949
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|
G |
Tent5a |
terminal nucleotidyltransferase 5A |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 8:86,222,294...86,229,045
Ensembl chr 8:86,225,357...86,229,045
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G |
Tent5b |
terminal nucleotidyltransferase 5B |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:145,695,358...145,702,668
Ensembl chr 5:145,695,362...145,706,073
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G |
Tent5c |
terminal nucleotidyltransferase 5C |
involved_in |
ISO ISS IBA |
(PMID:28931820) (MGI:5926094|PMID:28931820) GO_REF:0000024 PMID:21873635 |
RGD UniProt |
PMID:28931820 PMID:21873635 |
GO_REF:0000024 MGI:5926094, RGD:13792537 |
NCBI chr 2:187,853,026...187,875,260
Ensembl chr 2:187,853,024...187,894,744
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G |
Tent5d |
terminal nucleotidyltransferase 5D |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr X:72,901,287...72,974,562
Ensembl chr X:72,901,241...72,970,573
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G |
Thrap3 |
thyroid hormone receptor associated protein 3 |
involved_in |
ISO ISS |
(PMID:18794151) GO_REF:0000024 |
RGD UniProt |
PMID:18794151 |
GO_REF:0000024 |
NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477
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G |
Traf2 |
Tnf receptor-associated factor 2 |
involved_in |
ISO |
(MGI:5291882|PMID:21822258) |
RGD |
PMID:21822258 |
MGI:5291882 |
NCBI chr 3:8,341,950...8,366,609
Ensembl chr 3:8,341,951...8,366,538
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G |
Traf3ip2 |
Traf3 interacting protein 2 |
involved_in |
ISO |
(MGI:4355787|PMID:17785852), (MGI:5291882|PMID:21822258) |
RGD |
PMID:17785852 PMID:21822258 |
MGI:4355787 MGI:5291882 |
NCBI chr20:43,011,405...43,054,654
Ensembl chr20:43,011,450...43,054,667
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G |
Traf5 |
TNF receptor-associated factor 5 |
involved_in |
ISO |
(MGI:5291882|PMID:21822258) |
RGD |
PMID:21822258 |
MGI:5291882 |
NCBI chr13:103,569,944...103,618,756
Ensembl chr13:103,572,314...103,618,709
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Vegfa |
vascular endothelial growth factor A |
|
IDA |
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RGD |
PMID:12881220 |
RGD:1580563 |
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
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G |
Vip |
vasoactive intestinal peptide |
involved_in |
ISS |
GO_REF:0000024 |
AgBase |
|
GO_REF:0000024 |
NCBI chr 1:42,064,878...42,073,219
Ensembl chr 1:42,065,120...42,073,216
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G |
Ybx1 |
Y box binding protein 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:31358969) |
UniProt RGD |
PMID:31358969 |
GO_REF:0000024 |
NCBI chr 5:132,882,137...132,899,108
Ensembl chr 5:132,882,145...132,898,862
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G |
Ybx2 |
Y box binding protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:3576937 (MGI:3696301|PMID:17035640) |
RGD |
PMID:17035640 |
MGI:3696301 |
NCBI chr10:54,659,719...54,665,371
Ensembl chr10:54,659,719...54,665,371
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G |
Mettl16 |
methyltransferase like 16 |
involved_in |
ISO |
(PMID:28525753) |
RGD |
PMID:28525753 |
|
NCBI chr10:59,640,915...59,697,291
Ensembl chr10:59,640,972...59,687,061
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G |
Eif4enif1 |
eukaryotic translation initiation factor 4E nuclear import factor 1 |
involved_in |
ISO |
(PMID:32354837) |
RGD |
PMID:32354837 |
|
NCBI chr14:78,056,115...78,099,846
Ensembl chr14:78,056,297...78,098,793
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G |
Csde1 |
cold shock domain containing E1 |
involved_in |
ISO |
(PMID:11051545) |
RGD |
PMID:11051545 |
|
NCBI chr 2:190,546,015...190,582,790
Ensembl chr 2:190,554,980...190,582,784
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G |
Dhx9 |
DExH-box helicase 9 |
involved_in |
ISO |
(PMID:19029303) |
RGD |
PMID:19029303 |
|
NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
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G |
Hnrnpd |
heterogeneous nuclear ribonucleoprotein D |
involved_in |
ISO |
(PMID:11051545) |
RGD |
PMID:11051545 |
|
NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
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G |
Hnrnpu |
heterogeneous nuclear ribonucleoprotein U |
involved_in |
ISO IEA |
(PMID:19029303) GO_REF:0000107 |
RGD Ensembl |
PMID:19029303 |
GO_REF:0000107 |
NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
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G |
Igf2bp1 |
insulin-like growth factor 2 mRNA binding protein 1 |
involved_in |
ISO |
(PMID:19029303) |
RGD |
PMID:19029303 |
|
NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129
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G |
Pabpc1 |
poly(A) binding protein, cytoplasmic 1 |
involved_in |
ISO |
(PMID:11051545) |
RGD |
PMID:11051545 |
|
NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744
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G |
Paip1 |
poly(A) binding protein interacting protein 1 |
involved_in |
ISO |
(PMID:11051545) |
RGD |
PMID:11051545 |
|
NCBI chr 2:51,523,142...51,550,241
Ensembl chr 2:51,522,921...51,550,241
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G |
Syncrip |
synaptotagmin binding, cytoplasmic RNA interacting protein |
involved_in |
ISO IEA |
(PMID:11051545), (PMID:19029303) GO_REF:0000107 |
RGD Ensembl |
PMID:11051545 PMID:19029303 |
GO_REF:0000107 |
NCBI chr 8:89,402,487...89,435,517
Ensembl chr 8:89,402,866...89,435,515
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G |
Ybx1 |
Y box binding protein 1 |
involved_in |
ISO |
(PMID:19029303) |
RGD |
PMID:19029303 |
|
NCBI chr 5:132,882,137...132,899,108
Ensembl chr 5:132,882,145...132,898,862
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G |
Tent4a |
terminal nucleotidyltransferase 4A |
involved_in |
ISO |
(PMID:30026317) |
RGD |
PMID:30026317 |
|
NCBI chr 1:33,766,121...33,799,433
Ensembl chr 1:33,765,672...33,799,433
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G |
Tent4b |
terminal nucleotidyltransferase 4B |
involved_in |
ISO |
(PMID:30026317) |
RGD |
PMID:30026317 |
|
NCBI chr19:18,807,616...18,868,969
Ensembl chr19:18,807,525...18,869,537
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G |
Tob1 |
transducer of ErbB-2.1 |
involved_in |
ISO IEA ISS |
(PMID:18377426) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:18377426 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr10:79,163,093...79,165,131
Ensembl chr10:79,160,154...79,165,215
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G |
Exosc7 |
exosome component 7 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 8:122,773,607...122,798,943
Ensembl chr 8:122,773,591...122,799,270
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G |
Exosc8 |
exosome component 8 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:138,930,405...138,937,009
Ensembl chr 2:138,930,405...138,936,928
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G |
Exosc9 |
exosome component 9 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:119,416,028...119,426,981
Ensembl chr 2:119,388,715...119,427,051
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G |
Pnpt1 |
polyribonucleotide nucleotidyltransferase 1 |
involved_in |
ISO |
(PMID:16934922) |
RGD |
PMID:16934922 |
|
NCBI chr14:102,877,553...102,908,696
Ensembl chr14:102,877,553...102,908,696
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G |
Cnot1 |
CCR4-NOT transcription complex, subunit 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574
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G |
Cnot6l |
CCR4-NOT transcription complex, subunit 6-like |
acts_upstream_of_or_within |
ISO |
(MGI:3828348|PMID:17452450) |
RGD |
PMID:17452450 |
MGI:3828348 |
NCBI chr14:13,410,501...13,502,511
Ensembl chr14:13,411,281...13,498,203
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G |
Pabpn1l |
PABPN1 like |
acts_upstream_of_or_within |
ISO |
MGI:6509577 (MGI:6509513|PMID:32558204) |
RGD |
PMID:32558204 |
MGI:6509513 |
NCBI chr19:50,669,965...50,673,409
Ensembl chr19:50,669,967...50,673,366
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G |
Pde12 |
phosphodiesterase 12 |
involved_in |
ISO IEA IBA |
(PMID:21245038) GO_REF:0000107 PMID:21873635 |
RGD Ensembl |
PMID:21245038 PMID:21873635 |
GO_REF:0000107, RGD:13792537 |
NCBI chr16:1,915,386...1,925,427
Ensembl chr16:1,915,386...1,925,887
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G |
Polr2d |
RNA polymerase II subunit D |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr18:23,418,097...23,425,228
Ensembl chr18:23,418,097...23,425,228
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G |
Rc3h1 |
ring finger and CCCH-type domains 1 |
involved_in |
ISO |
(MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671) |
RGD |
PMID:26000482 PMID:26255671 |
MGI:5706859 MGI:5751631 |
NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
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G |
Rc3h2 |
ring finger and CCCH-type domains 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:21,121,531...21,186,711
Ensembl chr 3:21,110,679...21,179,933
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G |
Zfp36 |
zinc finger protein 36 |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:23644599) (MGI:3589099|PMID:15814898) |
RGD |
PMID:15814898 PMID:23644599 |
MGI:3589099 |
NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
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G |
Zfp36l1 |
zinc finger protein 36, C3H type-like 1 |
acts_upstream_of_or_within |
ISO |
(MGI:3589099|PMID:15814898) |
RGD |
PMID:15814898 |
MGI:3589099 |
NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
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G |
Zfp36l2 |
zinc finger protein 36, C3H type-like 2 |
acts_upstream_of_or_within |
ISO |
(MGI:3589099|PMID:15814898) |
RGD |
PMID:15814898 |
MGI:3589099 |
NCBI chr 6:10,490,032...10,494,073
Ensembl chr 6:10,490,032...10,494,064
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G |
Cnot2 |
CCR4-NOT transcription complex, subunit 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:52,130,444...52,222,338
Ensembl chr 7:52,130,441...52,223,575
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G |
Cnot3 |
CCR4-NOT transcription complex, subunit 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:65,555,924...65,572,167
Ensembl chr 1:65,555,924...65,572,167
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G |
Cnot6 |
CCR4-NOT transcription complex, subunit 6 |
involved_in |
IBA IEA ISS ISO |
PMID:21873635 GO_REF:0000107 GO_REF:0000024 (PMID:20595389) |
Ensembl UniProt RGD |
PMID:20595389 PMID:21873635 |
GO_REF:0000024 GO_REF:0000107, RGD:13792537 |
NCBI chr10:33,978,785...34,031,025
Ensembl chr10:33,980,831...34,031,025
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G |
Cnot6l |
CCR4-NOT transcription complex, subunit 6-like |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr14:13,410,501...13,502,511
Ensembl chr14:13,411,281...13,498,203
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G |
Cnot7 |
CCR4-NOT transcription complex, subunit 7 |
acts_upstream_of_or_within |
ISO |
(MGI:3807625|PMID:18625844) |
RGD |
PMID:18625844 |
MGI:3807625 |
NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576
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G |
Mlh1 |
mutL homolog 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857946 (MGI:1934053|PMID:11337385) |
Ensembl RGD |
PMID:11337385 |
GO_REF:0000107 MGI:1934053 |
NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617
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G |
Pan2 |
poly(A) specific ribonuclease subunit PAN2 |
involved_in |
IEA IBA |
GO_REF:0000104 PMID:21873635 |
UniProt |
PMID:21873635 |
GO_REF:0000104, RGD:13792537 |
NCBI chr 7:729,146...747,744
Ensembl chr 7:729,562...747,744
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G |
Pan3 |
poly(A) specific ribonuclease subunit PAN3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr12:7,476,707...7,595,380
Ensembl chr12:7,476,697...7,599,204
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G |
Parn |
poly(A)-specific ribonuclease |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 (MGI:3785219|PMID:18337750) |
RGD |
PMID:18337750 PMID:21873635 |
MGI:3785219, RGD:13792537 |
NCBI chr10:1,410,636...1,548,573
Ensembl chr10:1,410,642...1,548,560
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G |
Pnldc1 |
PARN like ribonuclease domain containing exonuclease 1 |
involved_in |
IBA ISO |
PMID:21873635 (MGI:5825409|PMID:27515512) (PMID:27515512) |
RGD |
PMID:27515512 PMID:21873635 |
MGI:5825409, RGD:13792537 |
NCBI chr 1:47,843,224...47,861,675
Ensembl chr 1:47,843,224...47,861,674
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G |
Samd4a |
sterile alpha motif domain containing 4A |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr15:20,135,994...20,352,131
Ensembl chr15:20,134,377...20,348,380
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G |
Samd4b |
sterile alpha motif domain containing 4B |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:83,689,413...83,728,652
Ensembl chr 1:83,689,413...83,713,853
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G |
Zfp36 |
zinc finger protein 36 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:3589099|PMID:15814898) (PMID:23644599) |
Ensembl RGD |
PMID:15814898 PMID:23644599 |
GO_REF:0000107 MGI:3589099 |
NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
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G |
Dis3l2 |
DIS3-like 3'-5' exoribonuclease 2 |
involved_in |
IEA |
GO_REF:0000104 |
UniProt |
|
GO_REF:0000104 |
NCBI chr 9:87,355,409...87,736,616
Ensembl chr 9:87,356,457...87,736,616
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|
G |
Tut4 |
terminal uridylyl transferase 4 |
involved_in |
ISO |
(MGI:6162305|PMID:28792939) |
RGD |
PMID:28792939 |
MGI:6162305 |
NCBI chr 5:123,201,723...123,306,582
Ensembl chr 5:123,203,003...123,306,465
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G |
Tut7 |
terminal uridylyl transferase 7 |
involved_in |
ISO |
(MGI:6162305|PMID:28792939) |
RGD |
PMID:28792939 |
MGI:6162305 |
NCBI chr17:4,849,287...4,903,542
Ensembl chr17:4,849,283...4,903,169
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G |
Elavl4 |
ELAV like RNA binding protein 4 |
involved_in |
ISO ISS |
(PMID:18218628) GO_REF:0000024 |
RGD UniProt |
PMID:18218628 |
GO_REF:0000024 |
NCBI chr 5:125,056,848...125,200,543
Ensembl chr 5:125,056,848...125,200,446
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G |
Larp4b |
La ribonucleoprotein 4B |
involved_in |
ISO |
(PMID:26001795) |
RGD |
PMID:26001795 |
|
NCBI chr17:61,138,709...61,217,423
Ensembl chr17:61,138,709...61,187,960
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|
G |
Rbm24 |
RNA binding motif protein 24 |
involved_in |
ISO |
(PMID:24356969) |
RGD |
PMID:24356969 |
|
NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
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|
G |
Tent4a |
terminal nucleotidyltransferase 4A |
involved_in |
ISO |
(PMID:30026317) |
RGD |
PMID:30026317 |
|
NCBI chr 1:33,766,121...33,799,433
Ensembl chr 1:33,765,672...33,799,433
|
|
G |
Tent4b |
terminal nucleotidyltransferase 4B |
involved_in |
ISO |
(PMID:30026317) |
RGD |
PMID:30026317 |
|
NCBI chr19:18,807,616...18,868,969
Ensembl chr19:18,807,525...18,869,537
|
|
|
G |
Ago2 |
argonaute RISC catalytic component 2 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:5486537|PMID:19716330) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:19716330 |
GO_REF:0000024 GO_REF:0000107 MGI:5486537 |
NCBI chr 7:105,018,202...105,105,120
Ensembl chr 7:105,029,120...105,104,974
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|
G |
Cnot1 |
CCR4-NOT transcription complex, subunit 1 |
involved_in |
ISO |
(PMID:21278420) |
RGD |
PMID:21278420 |
|
NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574
|
|
G |
Cnot7 |
CCR4-NOT transcription complex, subunit 7 |
involved_in |
ISO |
(PMID:21278420) (MGI:5486537|PMID:19716330) |
RGD |
PMID:19716330 PMID:21278420 |
MGI:5486537 |
NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576
|
|
G |
Cpeb3 |
cytoplasmic polyadenylation element binding protein 3 |
involved_in |
ISO |
(PMID:21336257) |
RGD |
PMID:21336257 |
|
NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560
|
|
G |
Dhx36 |
DEAH-box helicase 36 |
involved_in |
ISO |
(PMID:14731398) |
RGD |
PMID:14731398 |
|
NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
|
|
G |
Nanos1 |
nanos C2HC-type zinc finger 1 |
involved_in |
ISO |
(PMID:24736845) |
RGD |
PMID:24736845 |
|
NCBI chr 1:259,897,659...259,901,501
Ensembl chr 1:259,897,939...259,898,730
|
|
G |
Nanos2 |
nanos C2HC-type zinc finger 2 |
involved_in |
ISO |
(PMID:24736845) |
RGD |
PMID:24736845 |
|
NCBI chr 1:78,635,668...78,637,128
Ensembl chr 1:78,635,668...78,637,128
|
|
G |
Nanos3 |
nanos C2HC-type zinc finger 3 |
involved_in |
ISO |
(PMID:24736845) |
RGD |
PMID:24736845 |
|
NCBI chr19:23,978,465...23,988,933
Ensembl chr19:23,985,504...23,988,932
|
|
G |
Pabpc1 |
poly(A) binding protein, cytoplasmic 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5486537|PMID:19716330) |
UniProt RGD |
PMID:19716330 |
GO_REF:0000024 MGI:5486537 |
NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744
|
|
G |
Tnrc6b |
trinucleotide repeat containing adaptor 6B |
involved_in |
ISO |
(PMID:19716330) |
RGD |
PMID:19716330 |
|
NCBI chr 7:112,252,351...112,469,829
Ensembl chr 7:112,252,359...112,461,790
|
|
G |
Tnrc6c |
trinucleotide repeat containing adaptor 6C |
involved_in |
ISO |
(PMID:21984185) |
RGD |
PMID:21984185 |
|
NCBI chr10:102,908,958...102,979,543
Ensembl chr10:102,868,828...102,978,194
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G |
Tob1 |
transducer of ErbB-2.1 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:21336257) |
UniProt Ensembl RGD |
PMID:21336257 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr10:79,163,093...79,165,131
Ensembl chr10:79,160,154...79,165,215
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G |
Zfp36 |
zinc finger protein 36 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:5487524|PMID:21278420) GO_REF:0000107 (PMID:12748283) |
UniProt RGD Ensembl |
PMID:12748283 PMID:21278420 |
GO_REF:0000024 GO_REF:0000107 MGI:5487524 |
NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
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G |
Zfp36l1 |
zinc finger protein 36, C3H type-like 1 |
involved_in |
IDA |
PMID:12748283 |
UniProt |
PMID:12748283 |
RGD:11344945 |
NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
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G |
Zfp36l2 |
zinc finger protein 36, C3H type-like 2 |
involved_in |
ISO |
(MGI:5320815|PMID:22367205) |
RGD |
PMID:22367205 |
MGI:5320815 |
NCBI chr 6:10,490,032...10,494,073
Ensembl chr 6:10,490,032...10,494,064
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G |
Ago2 |
argonaute RISC catalytic component 2 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:5486537|PMID:19716330) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:19716330 |
GO_REF:0000024 GO_REF:0000107 MGI:5486537 |
NCBI chr 7:105,018,202...105,105,120
Ensembl chr 7:105,029,120...105,104,974
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G |
Btg2 |
BTG anti-proliferation factor 2 |
acts_upstream_of_or_within |
ISO |
(PMID:18337750) |
RGD |
PMID:18337750 |
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NCBI chr13:45,531,881...45,535,642
Ensembl chr13:45,531,925...45,535,628
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G |
Cnot1 |
CCR4-NOT transcription complex, subunit 1 |
involved_in |
ISO |
(PMID:21278420), (PMID:23644599) |
RGD |
PMID:21278420 PMID:23644599 |
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NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574
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G |
Cnot7 |
CCR4-NOT transcription complex, subunit 7 |
involved_in |
ISO |
(PMID:21278420) (MGI:5486537|PMID:19716330) |
RGD |
PMID:19716330 PMID:21278420 |
MGI:5486537 |
NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576
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G |
Cpeb3 |
cytoplasmic polyadenylation element binding protein 3 |
involved_in |
ISO |
(PMID:21336257) |
RGD |
PMID:21336257 |
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NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560
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G |
Eif4enif1 |
eukaryotic translation initiation factor 4E nuclear import factor 1 |
involved_in |
ISO |
(PMID:32354837) |
RGD |
PMID:32354837 |
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NCBI chr14:78,056,115...78,099,846
Ensembl chr14:78,056,297...78,098,793
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G |
Pabpc1 |
poly(A) binding protein, cytoplasmic 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5486537|PMID:19716330) |
UniProt RGD |
PMID:19716330 |
GO_REF:0000024 MGI:5486537 |
NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744
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G |
Polr2g |
RNA polymerase II subunit G |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:205,689,160...205,692,537
Ensembl chr 1:205,689,160...205,692,686
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G |
Tnrc6a |
trinucleotide repeat containing adaptor 6A |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:177,561,898...177,715,669
Ensembl chr 1:177,646,030...177,715,660
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G |
Tnrc6b |
trinucleotide repeat containing adaptor 6B |
involved_in |
ISO IBA |
(PMID:19716330) PMID:21873635 |
RGD |
PMID:19716330 PMID:21873635 |
RGD:13792537 |
NCBI chr 7:112,252,351...112,469,829
Ensembl chr 7:112,252,359...112,461,790
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G |
Tnrc6c |
trinucleotide repeat containing adaptor 6C |
involved_in |
ISO IBA |
(PMID:21984185) PMID:21873635 |
RGD |
PMID:21984185 PMID:21873635 |
RGD:13792537 |
NCBI chr10:102,908,958...102,979,543
Ensembl chr10:102,868,828...102,978,194
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G |
Tob1 |
transducer of ErbB-2.1 |
involved_in |
ISO IEA ISS |
(PMID:21336257) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:21336257 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr10:79,163,093...79,165,131
Ensembl chr10:79,160,154...79,165,215
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G |
Zfp36 |
zinc finger protein 36 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:5487524|PMID:21278420), (MGI:5795819|PMID:20595389) GO_REF:0000107 (PMID:10330172) |
UniProt RGD Ensembl |
PMID:10330172 PMID:20595389 PMID:21278420 |
GO_REF:0000024 GO_REF:0000107 MGI:5487524 MGI:5795819 |
NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
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G |
Fastk |
Fas-activated serine/threonine kinase |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:10,732,273...10,736,332
Ensembl chr 4:10,732,256...10,737,430
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G |
Fastkd1 |
FAST kinase domains 1 |
involved_in |
ISO IBA |
(PMID:28335001) PMID:21873635 |
RGD |
PMID:28335001 PMID:21873635 |
RGD:13792537 |
NCBI chr 3:54,449,710...54,475,624
Ensembl chr 3:54,449,711...54,475,540
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G |
Fastkd2 |
FAST kinase domains 2 |
involved_in |
IEA IBA |
GO_REF:0000002 PMID:21873635 |
InterPro |
PMID:21873635 |
GO_REF:0000002, RGD:13792537 |
NCBI chr 9:65,166,148...65,188,184
Ensembl chr 9:65,168,228...65,188,174
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G |
Fastkd3 |
FAST kinase domains 3 |
involved_in |
ISS IBA IEA ISO |
GO_REF:0000024 PMID:21873635 GO_REF:0000002 (PMID:27789713) |
UniProt InterPro RGD |
PMID:27789713 PMID:21873635 |
GO_REF:0000002 GO_REF:0000024, RGD:13792537 |
NCBI chr 1:34,858,342...34,866,988
Ensembl chr 1:34,858,219...34,866,973
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G |
Pde12 |
phosphodiesterase 12 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:21666256) |
Ensembl RGD |
PMID:21666256 |
GO_REF:0000107 |
NCBI chr16:1,915,386...1,925,427
Ensembl chr16:1,915,386...1,925,887
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G |
Tbrg4 |
transforming growth factor beta regulator 4 |
involved_in |
ISS IBA ISO |
GO_REF:0000024 PMID:21873635 (PMID:28335001) |
UniProt RGD |
PMID:28335001 PMID:21873635 |
GO_REF:0000024, RGD:13792537 |
NCBI chr14:81,481,977...81,490,781
Ensembl chr14:81,481,981...81,490,756
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G |
Alkbh5 |
alkB homolog 5, RNA demethylase |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6111276|PMID:29279410) |
UniProt RGD |
PMID:29279410 |
GO_REF:0000024 MGI:6111276 |
NCBI chr10:45,344,888...45,366,331
Ensembl chr10:45,343,395...45,366,331
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G |
Apex1 |
apurinic/apyrimidinic endodeoxyribonuclease 1 |
involved_in |
ISO ISS |
(PMID:19401441) GO_REF:0000024 |
RGD UniProt |
PMID:19401441 |
GO_REF:0000024 |
NCBI chr15:24,144,595...24,146,785
Ensembl chr15:24,144,362...24,146,785
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G |
Brf1 |
BRF1, RNA polymerase III transcription initiation factor subunit |
acts_upstream_of_or_within |
ISO |
(MGI:3037407|PMID:14976220) |
RGD |
PMID:14976220 |
MGI:3037407 |
NCBI chr 6:132,034,380...132,081,296
Ensembl chr 6:132,037,272...132,081,278
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G |
Cacng7 |
calcium voltage-gated channel auxiliary subunit gamma 7 |
|
IMP |
|
RGD |
PMID:18923037 |
RGD:13524564 |
NCBI chr 1:65,800,820...65,831,165
Ensembl chr 1:65,800,355...65,831,006
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G |
Calcr |
calcitonin receptor |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:85609|PMID:9002981) |
Ensembl RGD |
PMID:9002981 |
GO_REF:0000107 MGI:85609 |
NCBI chr 4:31,661,270...31,736,392
Ensembl chr 4:31,661,273...31,736,392
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G |
Carhsp1 |
calcium regulated heat stable protein 1 |
involved_in |
ISS ISO IBA |
GO_REF:0000024 (MGI:5320273|PMID:21078874) PMID:21873635 |
UniProt RGD |
PMID:21078874 PMID:21873635 |
GO_REF:0000024 MGI:5320273, RGD:13792537 |
NCBI chr10:6,946,036...6,960,556
Ensembl chr10:6,946,959...7,020,019
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G |
Csdc2 |
cold shock domain containing C2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:113,451,998...113,466,464
Ensembl chr 7:113,451,998...113,466,463
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G |
Dcp2 |
decapping mRNA 2 |
involved_in |
ISO |
(PMID:28002401) |
RGD |
PMID:28002401 |
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NCBI chr18:36,750,732...36,787,067
Ensembl chr18:36,750,732...36,788,557
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G |
Dhx36 |
DEAH-box helicase 36 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:18279852) |
UniProt RGD |
PMID:18279852 |
GO_REF:0000024 |
NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
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G |
Elavl4 |
ELAV like RNA binding protein 4 |
|
IMP |
|
RGD |
PMID:22736542 |
RGD:9586719 |
NCBI chr 5:125,056,848...125,200,543
Ensembl chr 5:125,056,848...125,200,446
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G |
Fmr1 |
fragile X messenger ribonucleoprotein 1 |
involved_in |
IBA ISO ISS |
PMID:21873635 (MGI:3710908|PMID:17417632) GO_REF:0000024 |
RGD UniProt |
PMID:17417632 PMID:21873635 |
GO_REF:0000024 MGI:3710908, RGD:13792537 |
NCBI chr X:147,240,239...147,278,057
Ensembl chr X:147,240,301...147,278,050
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G |
Fxr1 |
FMR1 autosomal homolog 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:116,884,167...116,937,586
Ensembl chr 2:116,884,248...116,937,590
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G |
Hnrnpd |
heterogeneous nuclear ribonucleoprotein D |
acts_upstream_of_or_within |
ISO |
(MGI:3037407|PMID:14976220) |
RGD |
PMID:14976220 |
MGI:3037407 |
NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
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G |
Khsrp |
KH-type splicing regulatory protein |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:16126846) |
UniProt RGD |
PMID:16126846 |
GO_REF:0000024 |
NCBI chr 9:1,862,555...1,872,301
Ensembl chr 9:1,862,899...1,872,451
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G |
Pabpc4 |
poly(A) binding protein, cytoplasmic 4 |
acts_upstream_of_or_within |
ISO |
(MGI:5585232|PMID:24469397) |
RGD |
PMID:24469397 |
MGI:5585232 |
NCBI chr 5:135,563,142...135,578,985
Ensembl chr 5:135,563,562...135,578,979
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G |
Pcbp4 |
poly(rC) binding protein 4 |
acts_upstream_of_or_within |
ISO |
(PMID:20817677) |
RGD |
PMID:20817677 |
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NCBI chr 8:107,092,688...107,103,276
Ensembl chr 8:107,093,013...107,103,276
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G |
Pcid2 |
PCI domain containing 2 |
involved_in |
ISO |
(PMID:20870947) |
RGD |
PMID:20870947 |
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NCBI chr16:76,423,245...76,448,712
Ensembl chr16:76,423,245...76,448,712
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G |
Pum1 |
pumilio RNA-binding family member 1 |
involved_in |
IBA ISO |
PMID:21873635 (PMID:26724866) |
RGD |
PMID:26724866 PMID:21873635 |
RGD:13792537 |
NCBI chr 5:142,836,933...142,954,331
Ensembl chr 5:142,837,127...142,954,039
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G |
Pum2 |
pumilio RNA-binding family member 2 |
involved_in |
IBA ISO |
PMID:21873635 (PMID:26724866) |
RGD |
PMID:26724866 PMID:21873635 |
RGD:13792537 |
NCBI chr 6:31,462,879...31,542,976
Ensembl chr 6:31,462,872...31,542,976
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G |
Rbm24 |
RNA binding motif protein 24 |
involved_in |
ISO |
(MGI:4999688|PMID:20977548) |
RGD |
PMID:20977548 |
MGI:4999688 |
NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
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G |
Rc3h1 |
ring finger and CCCH-type domains 1 |
involved_in |
ISO |
(MGI:5284769|PMID:18172933) |
RGD |
PMID:18172933 |
MGI:5284769 |
NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
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G |
Rnasel |
ribonuclease L |
acts_upstream_of_or_within |
ISO |
(MGI:5543366|PMID:22441668) |
RGD |
PMID:22441668 |
MGI:5543366 |
NCBI chr13:65,894,990...65,910,354
Ensembl chr13:65,901,459...65,908,704
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G |
Samd4a |
sterile alpha motif domain containing 4A |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr15:20,135,994...20,352,131
Ensembl chr15:20,134,377...20,348,380
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G |
Scgb1a1 |
secretoglobin family 1A member 1 |
acts_upstream_of_or_within |
ISO |
(MGI:3615741|PMID:15356574) |
RGD |
PMID:15356574 |
MGI:3615741 |
NCBI chr 1:205,977,060...205,980,610
Ensembl chr 1:205,977,060...205,980,610
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G |
Vim |
vimentin |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:21746880) |
Ensembl RGD |
PMID:21746880 |
GO_REF:0000107 |
NCBI chr17:76,668,701...76,677,186
Ensembl chr17:76,668,647...76,677,187
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G |
Ythdf1 |
YTH N(6)-methyladenosine RNA binding protein 1 |
involved_in |
ISO |
(PMID:32492408) (MGI:6490006|PMID:32943573) |
RGD |
PMID:32492408 PMID:32943573 |
MGI:6490006 |
NCBI chr 3:168,024,660...168,040,172
Ensembl chr 3:168,024,663...168,040,172
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G |
Ythdf2 |
YTH N(6)-methyladenosine RNA binding protein 2 |
involved_in |
ISO |
(PMID:24284625), (PMID:26046440), (PMID:32492408) (MGI:6490006|PMID:32943573) |
RGD |
PMID:24284625 PMID:26046440 PMID:32492408 PMID:32943573 |
MGI:6490006 |
NCBI chr 5:144,381,426...144,407,126
Ensembl chr 5:144,381,431...144,408,144
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G |
Ythdf3 |
YTH N(6)-methyladenosine RNA binding protein 3 |
involved_in |
ISO |
(PMID:32194978), (PMID:32492408) (MGI:6490006|PMID:32943573) |
RGD |
PMID:32194978 PMID:32492408 PMID:32943573 |
MGI:6490006 |
NCBI chr 2:98,350,304...98,384,608
Ensembl chr 2:98,350,588...98,384,606
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G |
Zc3h14 |
zinc finger CCCH type containing 14 |
involved_in |
IEA IBA |
GO_REF:0000002 PMID:21873635 |
InterPro |
PMID:21873635 |
GO_REF:0000002, RGD:13792537 |
NCBI chr 6:118,006,420...118,044,480
Ensembl chr 6:118,006,458...118,044,105
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G |
Zfp36 |
zinc finger protein 36 |
involved_in acts_upstream_of_or_within |
ISO ISS |
(PMID:11719186), (PMID:15187101), (PMID:15634918), (PMID:15687258), (PMID:20702587), (PMID:9703499) (MGI:3511379|PMID:15467755) (MGI:5784976|PMID:22701344), (MGI:5795824|PMID:17288565), (MGI:5795825|PMID:15634918) GO_REF:0000024 |
RGD UniProt |
PMID:9703499 PMID:11719186 PMID:15187101 PMID:15467755 PMID:15634918 PMID:15687258 PMID:17288565 PMID:20702587 PMID:22701344 More...
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GO_REF:0000024 MGI:3511379 MGI:5784976 MGI:5795824 MGI:5795825 |
NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
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G |
Zfp36l1 |
zinc finger protein 36, C3H type-like 1 |
involved_in acts_upstream_of_or_within |
IDA ISO ISS |
PMID:12748283 (PMID:15467755) (PMID:12198173), (PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:20702587), (PMID:24700863), (PMID:25014217), (PMID:25106868), (PMID:26542173) (MGI:4818820|PMID:20622884), (MGI:5784967|PMID:24733888), (MGI:5784968|PMID:24700863), (MGI:5784976|PMID:22701344) GO_REF:0000024 PMID:11279239 |
RGD UniProt |
PMID:12198173 PMID:15467755 PMID:15538381 PMID:15687258 PMID:18326031 PMID:19179481 PMID:20622884 PMID:20702587 PMID:22701344 PMID:24700863 PMID:24733888 PMID:25014217 PMID:25106868 PMID:26542173 PMID:12748283 PMID:11279239 More...
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GO_REF:0000024 MGI:4818820 MGI:5784967 MGI:5784968 MGI:5784976, RGD:11344945, RGD:11344953 |
NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
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G |
Zfp36l2 |
zinc finger protein 36, C3H type-like 2 |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:25106868) (MGI:4818820|PMID:20622884), (MGI:5784976|PMID:22701344) (MGI:3511379|PMID:15467755) |
RGD |
PMID:15467755 PMID:20622884 PMID:22701344 PMID:25106868 |
MGI:3511379 MGI:4818820 MGI:5784976 |
NCBI chr 6:10,490,032...10,494,073
Ensembl chr 6:10,490,032...10,494,064
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|
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G |
Npm1 |
nucleophosmin 1 |
involved_in |
ISO |
(PMID:12080348) |
RGD |
PMID:12080348 |
|
NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
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G |
Hnrnpm |
heterogeneous nuclear ribonucleoprotein M |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:14,438,703...14,476,781
Ensembl chr 7:14,438,688...14,476,762
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G |
Myef2 |
myelin expression factor 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:112,338,241...112,374,122
Ensembl chr 3:112,338,241...112,374,181
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|
|
G |
Igf2bp1 |
insulin-like growth factor 2 mRNA binding protein 1 |
involved_in |
ISO ISS |
(PMID:17101699) GO_REF:0000024 |
RGD UniProt |
PMID:17101699 |
GO_REF:0000024 |
NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129
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|
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G |
Rc3h1 |
ring finger and CCCH-type domains 1 |
involved_in |
ISO |
(PMID:31636267) |
RGD |
PMID:31636267 |
|
NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
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|
|
G |
Ddx49 |
DEAD-box helicase 49 |
involved_in |
ISO |
(PMID:29618122) |
RGD |
PMID:29618122 |
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NCBI chr16:19,125,388...19,133,042
Ensembl chr16:19,125,384...19,133,616
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G |
Dxo |
decapping exoribonuclease |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5488528|PMID:23523372) |
UniProt RGD |
PMID:23523372 |
GO_REF:0000024 MGI:5488528 |
NCBI chr20:3,993,322...3,995,484
Ensembl chr20:3,993,327...3,995,494
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G |
Lin28b |
lin-28 homolog B |
involved_in |
ISO |
(PMID:18951094) |
RGD |
PMID:18951094 |
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NCBI chr20:48,865,329...48,964,769
Ensembl chr20:48,869,485...48,955,077
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G |
Tnfrsf1b |
TNF receptor superfamily member 1B |
acts_upstream_of_or_within |
ISO |
MGI:1857262 (MGI:2152007|PMID:11588035) |
RGD |
PMID:11588035 |
MGI:2152007 |
NCBI chr 5:157,070,642...157,104,216
Ensembl chr 5:157,070,642...157,104,206
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G |
Zc3h18 |
zinc finger CCCH-type containing 18 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:28297668) |
Ensembl RGD |
PMID:28297668 |
GO_REF:0000107 |
NCBI chr19:50,434,864...50,479,855
Ensembl chr19:50,434,903...50,479,854
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G |
Zfp36 |
zinc finger protein 36 |
acts_upstream_of_or_within |
ISO |
MGI:2652418 (MGI:2152007|PMID:11588035) |
RGD |
PMID:11588035 |
MGI:2152007 |
NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
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G |
Naf1 |
nuclear assembly factor 1 ribonucleoprotein |
involved_in |
ISO |
(MGI:5816163|PMID:27510903) |
RGD |
PMID:27510903 |
MGI:5816163 |
NCBI chr16:22,837,586...22,868,293
Ensembl chr16:22,837,588...22,868,293
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G |
Phax |
phosphorylated adaptor for RNA export |
involved_in |
ISO |
(PMID:28297668) |
RGD |
PMID:28297668 |
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NCBI chr18:50,053,133...50,069,823
Ensembl chr18:50,053,023...50,069,823
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G |
Tent2 |
terminal nucleotidyltransferase 2 |
involved_in |
ISO ISS |
(PMID:23200856) GO_REF:0000024 |
RGD UniProt |
PMID:23200856 |
GO_REF:0000024 |
NCBI chr 2:24,380,135...24,432,099
Ensembl chr 2:24,380,225...24,432,099
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G |
Zcchc17 |
zinc finger CCHC-type containing 17 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 5:142,658,626...142,700,484
Ensembl chr 5:142,658,589...142,700,426
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G |
Ago1 |
argonaute RISC component 1 |
NOT|involved_in |
ISO |
(PMID:15260970) |
RGD |
PMID:15260970 |
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NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
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G |
Ago2 |
argonaute RISC catalytic component 2 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:15260970), (PMID:22795694) |
Ensembl RGD |
PMID:15260970 PMID:22795694 |
GO_REF:0000107 |
NCBI chr 7:105,018,202...105,105,120
Ensembl chr 7:105,029,120...105,104,974
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G |
Ago3 |
argonaute RISC catalytic component 3 |
NOT|involved_in |
ISO |
(PMID:15260970) |
RGD |
PMID:15260970 |
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NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230
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G |
Ago4 |
argonaute RISC component 4 |
NOT|involved_in |
ISO |
(PMID:15260970) |
RGD |
PMID:15260970 |
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NCBI chr 5:138,780,450...138,825,889
Ensembl chr 5:138,783,069...138,825,632
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G |
Dhx36 |
DEAH-box helicase 36 |
involved_in |
ISO |
(PMID:22238380) |
RGD |
PMID:22238380 |
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NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
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G |
Dkc1 |
dyskerin pseudouridine synthase 1 |
involved_in |
ISO |
(PMID:25467444), (PMID:26950371) |
RGD |
PMID:25467444 PMID:26950371 |
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G |
Naf1 |
nuclear assembly factor 1 ribonucleoprotein |
involved_in |
ISO |
(PMID:27510903) |
RGD |
PMID:27510903 |
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NCBI chr16:22,837,586...22,868,293
Ensembl chr16:22,837,588...22,868,293
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G |
Parn |
poly(A)-specific ribonuclease |
involved_in |
ISO |
(PMID:26482878), (PMID:26950371) |
RGD |
PMID:26482878 PMID:26950371 |
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NCBI chr10:1,410,636...1,548,573
Ensembl chr10:1,410,642...1,548,560
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G |
Nsun2 |
NOP2/Sun RNA methyltransferase 2 |
involved_in |
ISO |
(MGI:6194005|PMID:22885326) |
RGD |
PMID:22885326 |
MGI:6194005 |
NCBI chr 1:33,662,139...33,685,887
Ensembl chr 1:33,662,139...33,685,862
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G |
Trdmt1 |
tRNA aspartic acid methyltransferase 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6194005|PMID:22885326) |
UniProt RGD |
PMID:22885326 |
GO_REF:0000024 MGI:6194005 |
NCBI chr17:76,601,966...76,646,104
Ensembl chr17:76,610,543...76,645,439
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Term paths to the root
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