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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of RNA splicing
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Accession:GO:0043484 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of RNA splicing, the process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.


show annotations for term's descendants           Sort by:
regulation of RNA splicing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFF2 ALF transcription elongation factor 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:116,849,294...117,167,875
Ensembl chr  X:116,696,401...117,164,655 		JBrowse link
G AHNAK AHNAK nucleoprotein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr18:54,085,186...54,116,011
Ensembl chr18:54,100,942...54,113,424 		JBrowse link
G AKAP17A A-kinase anchoring protein 17A involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:1,031,392...1,042,457 JBrowse link
G BRDT bromodomain testis associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:56,918,939...56,977,355
Ensembl chr 6:56,919,195...56,965,638 		JBrowse link
G CCNL1 cyclin L1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:50,639,851...50,643,777 JBrowse link
G CCNL2 cyclin L2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:56,542,358...56,550,701
Ensembl chr 5:56,542,566...56,550,691 		JBrowse link
G CDK12 cyclin dependent kinase 12 ISO RGD PMID:16537916 RGD:8553775 NCBI chr 9:22,900,170...22,979,353
Ensembl chr 9:22,917,979...22,979,019 		JBrowse link
G CELF1 CUGBP Elav-like family member 1 involved_in ISO (PMID:16946708) UniProt PMID:16946708 NCBI chr18:42,105,316...42,199,017
Ensembl chr18:42,105,324...42,179,161 		JBrowse link
G CLK1 CDC like kinase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr37:10,054,230...10,065,416
Ensembl chr37:10,054,237...10,082,759 		JBrowse link
G CLK2 CDC like kinase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:42,284,869...42,294,434
Ensembl chr 7:42,284,699...42,294,394 		JBrowse link
G CLK3 CDC like kinase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr30:37,706,895...37,719,693
Ensembl chr30:37,706,645...37,719,684 		JBrowse link
G CLK4 CDC like kinase 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:2,960,161...2,986,699
Ensembl chr11:2,965,256...2,986,658 		JBrowse link
G ESRP1 epithelial splicing regulatory protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:39,322,516...39,388,363
Ensembl chr29:39,333,117...39,387,337 		JBrowse link
G ESRP2 epithelial splicing regulatory protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:81,287,330...81,297,533
Ensembl chr 5:81,287,425...81,295,353 		JBrowse link
G FAM50A family with sequence similarity 50 member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:122,148,234...122,158,172
Ensembl chr  X:122,148,282...122,154,807 		JBrowse link
G FASTK Fas activated serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:15,126,540...15,130,959
Ensembl chr16:15,124,704...15,130,917 		JBrowse link
G FUS FUS RNA binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:17,059,904...17,071,227
Ensembl chr 6:17,060,061...17,071,178 		JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 involved_in ISO (PMID:28985503) UniProt PMID:28985503 NCBI chr27:1,013,459...1,020,083
Ensembl chr27:1,015,868...1,019,891 		JBrowse link
G HNRNPF heterogeneous nuclear ribonucleoprotein F involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:3,651,685...3,672,320
Ensembl chr28:3,670,455...3,671,699 		JBrowse link
G HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:2,050,753...2,059,999
Ensembl chr11:2,050,871...2,059,999 		JBrowse link
G HNRNPL heterogeneous nuclear ribonucleoprotein L involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:114,267,195...114,279,107
Ensembl chr 1:114,267,210...114,278,837 		JBrowse link
G HNRNPLL heterogeneous nuclear ribonucleoprotein L like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:30,644,695...30,684,485
Ensembl chr17:30,645,676...30,684,377 		JBrowse link
G ILDR1 immunoglobulin like domain containing receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:25,207,537...25,238,071
Ensembl chr33:25,207,572...25,237,949 		JBrowse link
G ILDR2 immunoglobulin like domain containing receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:31,409,015...31,469,741
Ensembl chr 7:31,408,814...31,464,943 		JBrowse link
G LOC119877722 polypyrimidine tract-binding protein 1-like involved_in IEA TreeGrafter GO_REF:0000118
G MBNL1 muscleblind like splicing regulator 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr23:46,697,755...46,941,300
Ensembl chr23:46,737,790...46,938,233 		JBrowse link
G MBNL2 muscleblind like splicing regulator 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:47,568,335...47,729,901
Ensembl chr22:47,619,002...47,727,550 		JBrowse link
G MBNL3 muscleblind like splicing regulator 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:103,257,410...103,370,903
Ensembl chr  X:103,264,542...103,327,481 		JBrowse link
G METTL4 methyltransferase 4, N6-adenosine involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:69,229,717...69,268,223
Ensembl chr 7:69,191,223...69,267,683 		JBrowse link
G MYOD1 myogenic differentiation 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:40,257,792...40,260,461
Ensembl chr21:40,258,027...40,259,712 		JBrowse link
G PQBP1 polyglutamine binding protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23512658) MGI
Ensembl		 PMID:23512658 GO_REF:0000107 NCBI chr  X:42,056,660...42,060,508
Ensembl chr  X:42,056,708...42,121,818 		JBrowse link
G PRX periaxin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:113,279,940...113,294,042 JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:57,806,450...57,818,435
Ensembl chr20:57,807,826...57,818,359 		JBrowse link
G PTBP2 polypyrimidine tract binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:52,870,944...52,948,673
Ensembl chr 6:52,872,310...52,949,025 		JBrowse link
G PTBP3 polypyrimidine tract binding protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:66,727,670...66,847,755
Ensembl chr11:66,732,583...66,847,303 		JBrowse link
G RBFOX1 RNA binding fox-1 homolog 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:34,218,276...36,255,529
Ensembl chr 6:34,220,648...36,255,384 		JBrowse link
G RBFOX2 RNA binding fox-1 homolog 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:28,284,836...28,494,618
Ensembl chr10:28,192,683...28,489,114 		JBrowse link
G RBFOX3 RNA binding fox-1 homolog 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:2,362,354...2,374,492
Ensembl chr 9:2,362,231...2,372,739 		JBrowse link
G RBM20 RNA binding motif protein 20 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr28:21,971,424...22,162,798
Ensembl chr28:21,971,504...22,161,476 		JBrowse link
G RBM38 RNA binding motif protein 38 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr24:42,396,356...42,410,543
Ensembl chr24:42,396,352...42,409,240 		JBrowse link
G RRP1B ribosomal RNA processing 1B involved_in ISO (MGI:5919306|PMID:23604122) UniProt PMID:23604122 MGI:5919306 NCBI chr31:37,652,584...37,670,396
Ensembl chr31:37,652,863...37,667,895 		JBrowse link
G SNRNP70 small nuclear ribonucleoprotein U1 subunit 70 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:107,340,484...107,356,280
Ensembl chr 1:107,113,974...107,356,241 		JBrowse link
G SON SON DNA and RNA binding protein involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr31:28,165,758...28,198,692 JBrowse link
G SRRM4 serine/arginine repetitive matrix 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr26:15,049,612...15,324,454
Ensembl chr26:15,057,392...15,318,325 		JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 involved_in ISO (MGI:6810798|PMID:28785060) UniProt PMID:28785060 MGI:6810798 NCBI chr 9:32,692,517...32,696,325
Ensembl chr 9:32,694,073...32,696,285 		JBrowse link
G TRA2B transformer 2 beta homolog involved_in ISO (PMID:10749975)
(MGI:6810798|PMID:28785060)		 UniProt PMID:10749975 PMID:28785060 MGI:6810798 NCBI chr34:18,637,725...18,656,869
Ensembl chr34:18,638,325...18,657,862 		JBrowse link
G ZC3H10 zinc finger CCCH-type containing 10 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:439,163...445,587 JBrowse link
G ZNF326 zinc finger protein 326 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:58,597,606...58,632,781
Ensembl chr 6:58,598,416...58,632,776 		JBrowse link
negative regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACIN1 apoptotic chromatin condensation inducer 1 involved_in ISO (PMID:12665594) UniProt PMID:12665594 NCBI chr 8:3,370,469...3,405,710
Ensembl chr 8:3,371,004...3,405,682 		JBrowse link
G C1QBP complement C1q binding protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:31,354,665...31,359,672
Ensembl chr 5:31,354,723...31,359,469 		JBrowse link
G CELF4 CUGBP Elav-like family member 4 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chr 7:52,940,941...53,012,206
Ensembl chr 7:52,838,558...53,010,041 		JBrowse link
G DYRK1A dual specificity tyrosine phosphorylation regulated kinase 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21470964) Ensembl
MGI		 PMID:21470964 GO_REF:0000107 NCBI chr31:32,564,970...32,655,232
Ensembl chr31:32,511,502...32,652,572 		JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18480465) Ensembl
MGI		 PMID:18480465 GO_REF:0000107 NCBI chr14:39,498,805...39,509,034
Ensembl chr14:39,500,897...39,508,952 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr 1:75,499,334...75,511,525
Ensembl chr 1:75,499,393...75,511,425 		JBrowse link
G HNRNPL heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:22570490 RGD:9999428 NCBI chr 1:114,267,195...114,279,107
Ensembl chr 1:114,267,210...114,278,837 		JBrowse link
G NPM1 nucleophosmin 1 acts_upstream_of_or_within ISO (PMID:16376875) MGI PMID:16376875 NCBI chr 4:40,756,464...40,770,174
Ensembl chr 4:40,756,465...40,770,175 		JBrowse link
G PCBP4 poly(rC) binding protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) TreeGrafter
MGI		 PMID:23636947 GO_REF:0000118 NCBI chr20:37,748,854...37,759,072
Ensembl chr20:37,748,938...37,759,073 		JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr20:57,806,450...57,818,435
Ensembl chr20:57,807,826...57,818,359 		JBrowse link
G PTBP3 polypyrimidine tract binding protein 3 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chr11:66,727,670...66,847,755
Ensembl chr11:66,732,583...66,847,303 		JBrowse link
G RBM10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr  X:40,746,959...40,776,764
Ensembl chr  X:40,747,178...40,776,742 		JBrowse link
G RBM20 RNA binding motif protein 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:21,971,424...22,162,798
Ensembl chr28:21,971,504...22,161,476 		JBrowse link
G RBM42 RNA binding motif protein 42 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr 1:116,978,132...116,985,845
Ensembl chr 1:116,971,365...116,985,796 		JBrowse link
G RNPS1 RNA binding protein with serine rich domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:38,719,713...38,729,437
Ensembl chr 6:38,719,792...38,728,773 		JBrowse link
G SAP18 Sin3A associated protein 18 involved_in ISO (PMID:12665594) UniProt PMID:12665594 NCBI chr25:17,006,025...17,014,948
Ensembl chr25:17,008,110...17,014,544 		JBrowse link
G SFSWAP splicing factor SWAP involved_in ISO PMID:15009664 UniProt PMID:15009664 RGD:8554197 NCBI chr26:1,035,059...1,104,730
Ensembl chr26:1,035,074...1,104,694 		JBrowse link
G SRSF10 serine and arginine rich splicing factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:75,587,561...75,601,099
Ensembl chr 2:75,587,584...75,598,925 		JBrowse link
G SRSF4 serine and arginine rich splicing factor 4 involved_in ISO (PMID:15009664) UniProt PMID:15009664 NCBI chr 2:71,418,626...71,434,140
Ensembl chr 2:71,394,037...71,471,997 		JBrowse link
G SRSF4 serine and arginine rich splicing factor 4 involved_in IEA Ensembl GO_REF:0000107
G SRSF6 serine and arginine rich splicing factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:31,217,190...31,222,852
Ensembl chr24:31,217,184...31,218,618 		JBrowse link
G SRSF7 serine and arginine rich splicing factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:30,809,743...30,816,269
Ensembl chr17:30,809,951...30,816,218 		JBrowse link
G SRSF9 serine and arginine rich splicing factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:16,363,275...16,369,699
Ensembl chr26:16,363,475...16,369,666 		JBrowse link
G U2AF2 U2 small nuclear RNA auxiliary factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,074,759...102,091,326
Ensembl chr 1:102,074,790...102,091,385 		JBrowse link
negative regulation of RNA splicing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT2 AKT serine/threonine kinase 2 ISO RGD PMID:19116344 RGD:2313309 NCBI chr 1:113,359,038...113,407,119
Ensembl chr 1:113,359,575...113,407,131 		JBrowse link
G LOC102153358 bax inhibitor 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr27:14,754,090...14,755,422 JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:57,806,450...57,818,435
Ensembl chr20:57,807,826...57,818,359 		JBrowse link
G PTBP2 polypyrimidine tract binding protein 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:18534753 GO_REF:0000107 RGD:10045970 NCBI chr 6:52,870,944...52,948,673
Ensembl chr 6:52,872,310...52,949,025 		JBrowse link
G PTBP3 polypyrimidine tract binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:66,727,670...66,847,755
Ensembl chr11:66,732,583...66,847,303 		JBrowse link
G RPS13 ribosomal protein S13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:39,685,453...39,688,915
Ensembl chr21:39,685,458...39,804,903 		JBrowse link
G RPS26 ribosomal protein S26 involved_in ISO (PMID:15716004) UniProt PMID:15716004 NCBI chr10:362,699...364,406
Ensembl chr10:362,694...364,420 		JBrowse link
G TMBIM6 transmembrane BAX inhibitor motif containing 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr27:4,921,606...4,944,830
Ensembl chr27:4,921,606...4,944,783 		JBrowse link
positive regulation of mRNA cis splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF1 eukaryotic translation initiation factor 1 acts_upstream_of_or_within ISO (PMID:16789828) MGI PMID:16789828 NCBI chr 9:21,098,869...21,101,612
Ensembl chr 9:21,098,869...21,102,603 		JBrowse link
G EXOSC10 exosome component 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16789828) Ensembl
MGI		 PMID:16789828 GO_REF:0000107 NCBI chr 2:84,942,801...84,964,129
Ensembl chr 2:84,942,777...84,964,130 		JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16789828) Ensembl
MGI		 PMID:16789828 GO_REF:0000107 NCBI chr20:44,234,411...44,271,129
Ensembl chr20:44,236,264...44,270,916 		JBrowse link
G UPF3A UPF3A regulator of nonsense mediated mRNA decay acts_upstream_of_or_within ISO (PMID:16789828) MGI PMID:16789828 NCBI chr22:61,320,575...61,373,082
Ensembl chr22:61,320,451...61,345,839 		JBrowse link
G UPF3B UPF3B regulator of nonsense mediated mRNA decay acts_upstream_of_or_within ISO (PMID:16789828) MGI PMID:16789828 NCBI chr  X:91,835,845...91,851,755
Ensembl chr  X:91,836,727...91,851,640 		JBrowse link
positive regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELF3 CUGBP Elav-like family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:60,733,148...60,747,553
Ensembl chr17:60,735,628...60,746,615 		JBrowse link
G CELF4 CUGBP Elav-like family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:52,940,941...53,012,206
Ensembl chr 7:52,838,558...53,010,041 		JBrowse link
G CIRBP cold inducible RNA binding protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:57,521,609...57,526,526
Ensembl chr20:57,519,119...57,526,435 		JBrowse link
G DAZAP1 DAZ associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr20:57,411,249...57,435,852
Ensembl chr20:57,411,825...57,435,799 		JBrowse link
G EIF4A3 eukaryotic translation initiation factor 4A3 acts_upstream_of_or_within ISO (PMID:18480465) MGI PMID:18480465 NCBI chr 9:1,582,950...1,593,893
Ensembl chr 9:1,582,993...1,593,892 		JBrowse link
G HMX2 H6 family homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr28:32,679,585...32,687,972
Ensembl chr28:32,679,579...32,687,982 		JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr 5:11,292,219...11,296,851
Ensembl chr 5:11,292,262...11,296,797 		JBrowse link
G LMNTD2 lamin tail domain containing 2 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chr18:25,663,814...25,669,420
Ensembl chr18:25,663,814...25,668,768 		JBrowse link
G LOC100687756 transformer-2 protein homolog beta-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:42,198,746...42,200,101 JBrowse link
G LOC119866711 RNA-binding motif protein, X chromosome involved_in IEA TreeGrafter GO_REF:0000118
G LOC119868769 RNA-binding motif protein, X chromosome-like involved_in IEA TreeGrafter GO_REF:0000118
G LOC119873859 heat shock cognate 71 kDa protein-like involved_in IEA Ensembl GO_REF:0000107
G LOC607182 heat shock cognate 71 kDa protein-like involved_in IEA Ensembl GO_REF:0000107
G NCBP1 nuclear cap binding protein subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:54,938,250...54,974,536
Ensembl chr11:54,938,372...54,974,547 		JBrowse link
G NCL nucleolin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:43,330,524...43,384,909
Ensembl chr25:43,330,799...43,384,258 		JBrowse link
G NUP98 nucleoporin 98 and 96 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:26,231,585...26,348,019
Ensembl chr21:26,220,963...26,336,020 		JBrowse link
G OBI1 ORC ubiquitin ligase 1 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chr22:32,006,441...32,047,609
Ensembl chr22:32,007,210...32,047,527 		JBrowse link
G PRDX6 peroxiredoxin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:25,663,238...25,675,855
Ensembl chr 7:25,663,579...25,675,754 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18480465) Ensembl
MGI		 PMID:18480465 GO_REF:0000107 NCBI chr18:55,389,902...55,400,241
Ensembl chr18:55,389,897...55,400,240 		JBrowse link
G RBM3 RNA binding motif protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:41,806,072...41,809,803
Ensembl chr  X:41,806,176...41,809,481 		JBrowse link
G RBMX RNA binding motif protein X-linked involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:107,173,599...107,182,404
Ensembl chr  X:107,175,634...107,182,347 		JBrowse link
G RBMXL2 RBMX like 2 involved_in IEA TreeGrafter GO_REF:0000118
G SF3B4 splicing factor 3b subunit 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI
TreeGrafter		 PMID:23636947 GO_REF:0000107 GO_REF:0000118 NCBI chr17:59,208,989...59,214,643
Ensembl chr17:59,208,990...59,213,991 		JBrowse link
G SLC39A5 solute carrier family 39 member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr10:552,755...557,319 JBrowse link
G SNRNP70 small nuclear ribonucleoprotein U1 subunit 70 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr 1:107,340,484...107,356,280
Ensembl chr 1:107,113,974...107,356,241 		JBrowse link
G SNW1 SNW domain containing 1 involved_in ISO (PMID:12840015) UniProt PMID:12840015 NCBI chr 8:50,478,924...50,512,360
Ensembl chr 8:50,479,338...50,512,243 		JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:5,955,469...6,022,442
Ensembl chr15:5,956,316...6,021,875 		JBrowse link
G TRA2A transformer 2 alpha homolog involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22194695) TreeGrafter
MGI		 PMID:22194695 GO_REF:0000118 NCBI chr14:37,159,890...37,183,457
Ensembl chr14:37,160,872...37,183,274 		JBrowse link
G TRA2B transformer 2 beta homolog involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22194695) TreeGrafter
MGI		 PMID:22194695 GO_REF:0000118 NCBI chr34:18,637,725...18,656,869
Ensembl chr34:18,638,325...18,657,862 		JBrowse link
G ZFP64 ZFP64 zinc finger protein acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chr24:38,201,824...38,289,395
Ensembl chr24:38,203,028...38,289,580 		JBrowse link
positive regulation of RNA splicing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DYRK1A dual specificity tyrosine phosphorylation regulated kinase 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:32,564,970...32,655,232
Ensembl chr31:32,511,502...32,652,572 		JBrowse link
G ERN1 endoplasmic reticulum to nucleus signaling 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:11,930,614...12,006,724
Ensembl chr 9:11,934,965...12,006,814 		JBrowse link
G HABP4 hyaluronan binding protein 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:70,339,386...70,381,694
Ensembl chr 1:70,340,627...70,377,204 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:22684629 RGD:10002775 NCBI chr 1:75,499,334...75,511,525
Ensembl chr 1:75,499,393...75,511,425 		JBrowse link
G HNRNPLL heterogeneous nuclear ribonucleoprotein L like involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:30,644,695...30,684,485
Ensembl chr17:30,645,676...30,684,377 		JBrowse link
G HSP70 heat shock protein 70 involved_in ISO (PMID:20625543) ParkinsonsUK-UCL PMID:20625543 NCBI chr12:1,285,282...1,287,670 JBrowse link
G KHDRBS3 KH RNA binding domain containing, signal transduction associated 3 ISO RGD PMID:11118435 RGD:632715 NCBI chr13:31,397,501...31,583,198
Ensembl chr13:31,392,842...31,605,257 		JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:53,447,802...53,527,563
Ensembl chr 2:53,448,286...53,524,970 		JBrowse link
G POLR2A RNA polymerase II subunit A involved_in ISO (PMID:21536736) UniProt PMID:21536736 NCBI chr 5:32,403,814...32,429,717
Ensembl chr 5:32,403,829...32,429,681 		JBrowse link
G RBM20 RNA binding motif protein 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:21,971,424...22,162,798
Ensembl chr28:21,971,504...22,161,476 		JBrowse link
G RBM22 RNA binding motif protein 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:58,460,805...58,470,411
Ensembl chr 4:58,460,847...58,469,762 		JBrowse link
G SETX senataxin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:51,900,004...51,980,694
Ensembl chr 9:51,901,233...51,978,833 		JBrowse link
G SLC38A2 solute carrier family 38 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:8,056,289...8,068,988
Ensembl chr27:8,018,880...8,066,331 		JBrowse link
G SMN survival motor neuron involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22037760) Ensembl
MGI		 PMID:22037760 GO_REF:0000107 NCBI chr 2:54,596,000...54,636,837
Ensembl chr 2:54,596,008...54,636,804 		JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 ISO RGD PMID:16308321 RGD:11038784 NCBI chr 9:32,692,517...32,696,325
Ensembl chr 9:32,694,073...32,696,285 		JBrowse link
G SRSF5 serine and arginine rich splicing factor 5 ISO RGD PMID:9199345 RGD:11039429 NCBI chr 8:43,514,048...43,519,019
Ensembl chr 8:43,514,076...43,518,481 		JBrowse link
G U2AF2 U2 small nuclear RNA auxiliary factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,074,759...102,091,326
Ensembl chr 1:102,074,790...102,091,385 		JBrowse link
G ZPR1 ZPR1 zinc finger involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:16,778,803...16,787,493
Ensembl chr 5:16,778,832...16,787,105 		JBrowse link
regulation of alternative mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARB2A ARB2 cotranscriptional regulator A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:15,281,442...15,695,303
Ensembl chr 3:15,281,448...15,694,715 		JBrowse link
G CELF1 CUGBP Elav-like family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32109384) Ensembl
MGI
TreeGrafter		 PMID:32109384 GO_REF:0000107 GO_REF:0000118 NCBI chr18:42,105,316...42,199,017
Ensembl chr18:42,105,324...42,179,161 		JBrowse link
G CELF2 CUGBP Elav-like family member 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:25,003,810...25,818,264
Ensembl chr 2:25,004,580...25,520,136 		JBrowse link
G CELF3 CUGBP Elav-like family member 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:60,733,148...60,747,553
Ensembl chr17:60,735,628...60,746,615 		JBrowse link
G CELF4 CUGBP Elav-like family member 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19720736) MGI
TreeGrafter
Ensembl		 PMID:19720736 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:52,940,941...53,012,206
Ensembl chr 7:52,838,558...53,010,041 		JBrowse link
G CELF5 CUGBP Elav-like family member 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:56,027,245...56,075,579
Ensembl chr20:56,029,575...56,075,948 		JBrowse link
G CELF6 CUGBP Elav-like family member 6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr30:35,783,357...35,813,362 JBrowse link
G DDX17 DEAD-box helicase 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:26,282,592...26,303,128
Ensembl chr10:26,282,598...26,301,633 		JBrowse link
G DDX5 DEAD-box helicase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:12,300,706...12,307,931
Ensembl chr 9:12,300,708...12,307,663 		JBrowse link
G DYRK1A dual specificity tyrosine phosphorylation regulated kinase 1A involved_in ISO PMID:22767602 UniProt PMID:22767602 RGD:8554210 NCBI chr31:32,564,970...32,655,232
Ensembl chr31:32,511,502...32,652,572 		JBrowse link
G FMR1 Fragile X messenger ribonucleoprotein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:116,249,079...116,287,008
Ensembl chr  X:116,249,142...116,321,439 		JBrowse link
G FUBP3 far upstream element binding protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:53,317,955...53,370,040
Ensembl chr 9:53,317,438...53,370,112 		JBrowse link
G FXR1 FMR1 autosomal homolog 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr34:14,129,978...14,192,016
Ensembl chr34:14,130,017...14,191,370 		JBrowse link
G FXR2 FMR1 autosomal homolog 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:32,510,830...32,525,680
Ensembl chr 5:32,511,338...32,525,683 		JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 involved_in ISO (PMID:25689357) CAFA PMID:25689357 NCBI chr27:1,013,459...1,020,083
Ensembl chr27:1,015,868...1,019,891 		JBrowse link
G HNRNPL heterogeneous nuclear ribonucleoprotein L involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:114,267,195...114,279,107
Ensembl chr 1:114,267,210...114,278,837 		JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:35,832,956...35,842,898
Ensembl chr 7:35,833,988...35,843,754 		JBrowse link
G KHDRBS1 KH RNA binding domain containing, signal transduction associated 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:69,108,822...69,148,067
Ensembl chr 2:69,123,663...69,148,073 		JBrowse link
G KHDRBS2 KH RNA binding domain containing, signal transduction associated 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:25,544,069...26,142,284
Ensembl chr12:25,585,694...26,142,337 		JBrowse link
G KHDRBS3 KH RNA binding domain containing, signal transduction associated 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:31,397,501...31,583,198
Ensembl chr13:31,392,842...31,605,257 		JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:53,746,656...53,755,388
Ensembl chr20:53,745,742...53,756,870 		JBrowse link
G LOC100855475 RNA-binding protein 7-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:33,879,501...33,880,308 JBrowse link
G LOC607091 pre-mRNA-splicing regulator WTAP-like involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr25:5,602,446...5,604,899 JBrowse link
G LOC607384 pre-mRNA-splicing regulator WTAP-like involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 3:37,300,991...37,303,109 JBrowse link
G MAGOH mago homolog, exon junction complex subunit involved_in ISO (PMID:22203037) UniProt PMID:22203037 NCBI chr 5:55,688,443...55,699,741 JBrowse link
G MBNL1 muscleblind like splicing regulator 1 involved_in ISO PMID:31283468 UniProt PMID:31283468 RGD:243049249 NCBI chr23:46,697,755...46,941,300
Ensembl chr23:46,737,790...46,938,233 		JBrowse link
G MBNL2 muscleblind like splicing regulator 2 involved_in
acts_upstream_of_or_within		 ISO PMID:31283468
(PMID:19720736)		 UniProt
MGI		 PMID:19720736 PMID:31283468 RGD:243049249 NCBI chr22:47,568,335...47,729,901
Ensembl chr22:47,619,002...47,727,550 		JBrowse link
G MYOD1 myogenic differentiation 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9525963) Ensembl
MGI		 PMID:9525963 GO_REF:0000107 NCBI chr21:40,257,792...40,260,461
Ensembl chr21:40,258,027...40,259,712 		JBrowse link
G NOVA1 NOVA alternative splicing regulator 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:6,133,608...6,281,508
Ensembl chr 8:6,135,679...6,281,384 		JBrowse link
G NOVA2 NOVA alternative splicing regulator 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:109,657,693...109,683,277
Ensembl chr 1:109,659,184...109,682,902 		JBrowse link
G NSRP1 nuclear speckle splicing regulatory protein 1 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 9:44,155,516...44,209,902
Ensembl chr 9:44,155,619...44,209,375 		JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:57,806,450...57,818,435
Ensembl chr20:57,807,826...57,818,359 		JBrowse link
G PUF60 poly(U) binding splicing factor 60 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr13:37,375,781...37,387,969
Ensembl chr13:37,375,651...37,387,875 		JBrowse link
G RBFOX1 RNA binding fox-1 homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23300487) InterPro
MGI
TreeGrafter		 PMID:23300487 GO_REF:0000002 GO_REF:0000118 NCBI chr 6:34,218,276...36,255,529
Ensembl chr 6:34,220,648...36,255,384 		JBrowse link
G RBFOX2 RNA binding fox-1 homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22357600)
Cacna1c
Atp2b1, Mef2a
Mcl1
Fxr1, Mef2a, Mtmr3		 Ensembl
MGI
TreeGrafter
RGD
InterPro		 PMID:22357600 PMID:27239029 PMID:28993448 PMID:31778749 PMID:35641779 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:329845872 RGD:329845873 RGD:329845874 RGD:329848961 NCBI chr10:28,284,836...28,494,618
Ensembl chr10:28,192,683...28,489,114 		JBrowse link
G RBFOX3 RNA binding fox-1 homolog 3 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 9:2,362,354...2,374,492
Ensembl chr 9:2,362,231...2,372,739 		JBrowse link
G RBM11 RNA binding motif protein 11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21984414) MGI
TreeGrafter		 PMID:21984414 GO_REF:0000118 NCBI chr31:11,204,273...11,217,526
Ensembl chr31:11,203,207...11,217,509 		JBrowse link
G RBM15 RNA binding motif protein 15 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:41,645,765...41,653,621
Ensembl chr 6:41,645,769...41,653,799 		JBrowse link
G RBM15B RNA binding motif protein 15B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:38,191,079...38,194,150
Ensembl chr20:38,191,439...38,192,730 		JBrowse link
G RBM20 RNA binding motif protein 20 involved_in ISO PMID:27289039
PMID:33805770		 UniProt PMID:27289039 PMID:33805770 RGD:152995553 RGD:152995577 NCBI chr28:21,971,424...22,162,798
Ensembl chr28:21,971,504...22,161,476 		JBrowse link
G RBM24 RNA binding motif protein 24 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr35:16,255,076...16,294,967 JBrowse link
G RBM25 RNA binding motif protein 25 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:46,442,233...46,486,801
Ensembl chr 8:46,433,603...46,484,564 		JBrowse link
G RBM47 RNA binding motif protein 47 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:71,985,725...72,135,271
Ensembl chr 3:71,985,831...72,132,918 		JBrowse link
G RBM5 RNA binding motif protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:39,198,706...39,227,856
Ensembl chr20:39,199,154...39,227,769 		JBrowse link
G RBM7 RNA binding motif protein 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:18,950,393...18,959,844 JBrowse link
G RBM8A RNA binding motif protein 8A involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:58,722,449...58,726,017
Ensembl chr17:58,724,227...58,725,969 		JBrowse link
G RBMX RNA binding motif protein X-linked involved_in ISO (PMID:12165565), (PMID:12761049) UniProt PMID:12165565 PMID:12761049 NCBI chr  X:107,173,599...107,182,404
Ensembl chr  X:107,175,634...107,182,347 		JBrowse link
G RBPMS RNA binding protein, mRNA processing factor involved_in ISO PMID:37548402 UniProt PMID:37548402 RGD:401901235 NCBI chr16:33,788,675...33,961,595
Ensembl chr16:33,788,781...33,960,286 		JBrowse link
G RBPMS2 RNA binding protein, mRNA processing factor 2 involved_in ISO PMID:31283468 UniProt PMID:31283468 RGD:243049249 NCBI chr30:29,160,879...29,187,231
Ensembl chr30:29,157,119...29,232,043 		JBrowse link
G REST RE1 silencing transcription factor involved_in ISO (MGI:6201823|PMID:21884984) UniProt PMID:21884984 MGI:6201823 NCBI chr13:49,041,082...49,062,596
Ensembl chr13:49,041,047...49,059,388 		JBrowse link
G RNPS1 RNA binding protein with serine rich domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:38,719,713...38,729,437
Ensembl chr 6:38,719,792...38,728,773 		JBrowse link
G SAP18 Sin3A associated protein 18 involved_in ISO (PMID:22203037)
(PMID:20966198)		 UniProt PMID:20966198 PMID:22203037 NCBI chr25:17,006,025...17,014,948
Ensembl chr25:17,008,110...17,014,544 		JBrowse link
G SF3A1 splicing factor 3a subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:23,485,551...23,504,242
Ensembl chr26:23,485,797...23,504,346 		JBrowse link
G SMNDC1 survival motor neuron domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr28:21,660,501...21,672,279
Ensembl chr28:21,661,881...21,671,781 		JBrowse link
G SRRM4 serine/arginine repetitive matrix 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23055939) Ensembl
MGI		 PMID:23055939 GO_REF:0000107 NCBI chr26:15,049,612...15,324,454
Ensembl chr26:15,057,392...15,318,325 		JBrowse link
G SRSF12 serine and arginine rich splicing factor 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,355,844...48,398,753
Ensembl chr12:48,358,285...48,374,072 		JBrowse link
G SRSF2 serine and arginine rich splicing factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21470964) Ensembl
MGI		 PMID:21470964 GO_REF:0000107 NCBI chr 9:4,028,414...4,032,371
Ensembl chr 9:4,028,482...4,030,793 		JBrowse link
G SRSF6 serine and arginine rich splicing factor 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23132731) MGI
Ensembl		 PMID:23132731 GO_REF:0000107 NCBI chr24:31,217,190...31,222,852
Ensembl chr24:31,217,184...31,218,618 		JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:5,955,469...6,022,442
Ensembl chr15:5,956,316...6,021,875 		JBrowse link
G TIA1 TIA1 cytotoxic granule associated RNA binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:68,768,080...68,798,869
Ensembl chr10:68,770,647...68,798,799 		JBrowse link
G TRA2B transformer 2 beta homolog involved_in ISO (PMID:12165565), (PMID:12761049)
(PMID:25689357)		 UniProt
CAFA		 PMID:12165565 PMID:12761049 PMID:25689357 NCBI chr34:18,637,725...18,656,869
Ensembl chr34:18,638,325...18,657,862 		JBrowse link
G WTAP WT1 associated protein involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:48,976,523...49,004,536
Ensembl chr 1:48,976,499...49,003,961 		JBrowse link
G YTHDC1 YTH N6-methyladenosine RNA binding protein C1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29799838) Ensembl
MGI
TreeGrafter		 PMID:29799838 GO_REF:0000107 GO_REF:0000118 NCBI chr13:58,818,424...58,858,241
Ensembl chr13:58,818,796...58,857,571 		JBrowse link
G ZBTB7A zinc finger and BTB domain containing 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:55,517,531...55,527,071
Ensembl chr20:55,505,916...55,523,736 		JBrowse link
regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPK heterogeneous nuclear ribonucleoprotein K involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:75,499,334...75,511,525
Ensembl chr 1:75,499,393...75,511,425 		JBrowse link
G JMJD6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,037,307...4,076,119
Ensembl chr 9:4,037,439...4,076,123 		JBrowse link
G KHDRBS1 KH RNA binding domain containing, signal transduction associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:69,108,822...69,148,067
Ensembl chr 2:69,123,663...69,148,073 		JBrowse link
G KHDRBS2 KH RNA binding domain containing, signal transduction associated 2 involved_in ISO (MGI:5302133|PMID:22196734) UniProt PMID:22196734 MGI:5302133 NCBI chr12:25,544,069...26,142,284
Ensembl chr12:25,585,694...26,142,337 		JBrowse link
G KHDRBS3 KH RNA binding domain containing, signal transduction associated 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:31,397,501...31,583,198
Ensembl chr13:31,392,842...31,605,257 		JBrowse link
G LARP7 La ribonucleoprotein 7, transcriptional regulator involved_in ISO (MGI:6400674|PMID:32017896)
(PMID:32017898)		 UniProt PMID:32017896 PMID:32017898 MGI:6400674 NCBI chr32:32,421,648...32,439,431
Ensembl chr32:32,421,675...32,439,131 		JBrowse link
G METTL16 methyltransferase 16, RNA N6-adenosine NOT|involved_in ISO
IEA		 (MGI:6114846|PMID:29262316) UniProt
Ensembl		 PMID:29262316 GO_REF:0000107 MGI:6114846 NCBI chr 9:46,491,503...46,566,752
Ensembl chr 9:46,496,963...46,558,313 		JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in IEA
ISS
IBA		 Ensembl
UniProt
TreeGrafter
GO_Central		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:51,800,294...51,956,891
Ensembl chr 1:51,800,309...51,952,714 		JBrowse link
G RBM20 RNA binding motif protein 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:21,971,424...22,162,798
Ensembl chr28:21,971,504...22,161,476 		JBrowse link
G RBM23 RNA binding motif protein 23 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:3,233,715...3,247,014
Ensembl chr 8:3,234,859...3,246,981 		JBrowse link
G RBM39 RNA binding motif protein 39 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:24,618,966...24,648,384
Ensembl chr24:24,619,691...24,648,474 		JBrowse link
G SF1 splicing factor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr18:52,380,058...52,393,833
Ensembl chr18:52,380,211...52,393,048 		JBrowse link
G SON SON DNA and RNA binding protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr31:28,165,758...28,198,692 JBrowse link
G SRRM1 serine and arginine repetitive matrix 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:75,018,637...75,053,908
Ensembl chr 2:75,019,339...75,049,398 		JBrowse link
G SRSF10 serine and arginine rich splicing factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:75,587,561...75,601,099
Ensembl chr 2:75,587,584...75,598,925 		JBrowse link
G SRSF3 serine and arginine rich splicing factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:5,677,879...5,686,220
Ensembl chr12:5,677,907...5,684,446 		JBrowse link
G TIA1 TIA1 cytotoxic granule associated RNA binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:68,768,080...68,798,869
Ensembl chr10:68,770,647...68,798,799 		JBrowse link
G YTHDC1 YTH N6-methyladenosine RNA binding protein C1 involved_in ISO (PMID:26876937), (PMID:28984244) UniProt PMID:26876937 PMID:28984244 NCBI chr13:58,818,424...58,858,241
Ensembl chr13:58,818,796...58,857,571 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17878
    metabolic process 10933
      regulation of metabolic process 6335
        regulation of macromolecule metabolic process 5787
          regulation of RNA metabolic process 3363
            regulation of RNA splicing 168
              negative regulation of RNA splicing + 30
              positive regulation of RNA splicing + 53
              regulation of mRNA splicing, via spliceosome + 120
Path 2
Term Annotations click to browse term
  biological_process 17878
    cellular process 16920
      cellular metabolic process 9610
        cellular nitrogen compound metabolic process 5605
          nucleobase-containing compound metabolic process 5349
            nucleic acid metabolic process 4781
              RNA metabolic process 4208
                RNA processing 948
                  RNA splicing 419
                    regulation of RNA splicing 168
                      negative regulation of RNA splicing + 30
                      positive regulation of RNA splicing + 53
                      regulation of mRNA splicing, via spliceosome + 120
paths to the root