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ONTOLOGY REPORT - ANNOTATIONS

Term:pigment accumulation
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Accession:GO:0043476 term browser browse the term
Definition:The aggregation of coloring matter in a particular location in an organism, tissue or cell, occurring in response to some external stimulus.
Synonyms:exact_synonym: pigment accumulation in response to external stimulus


show annotations for term's descendants           Sort by:
pigment accumulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ugt1a1 UDP glucuronosyltransferase family 1 member A1 acts_upstream_of_or_within ISO (PMID:33961837) RGD PMID:33961837 NCBI chr 9:96,249,143...96,256,264
Ensembl chr 9:88,713,184...88,808,465 		JBrowse link
endosome to melanosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd27 ankyrin repeat domain 27 involved_in ISO
IEA 		(PMID:21187829)
GO_REF:0000107 		RGD
Ensembl		 PMID:21187829 GO_REF:0000107 NCBI chr 1:88,251,216...88,303,615
Ensembl chr 1:88,251,226...88,303,615 		JBrowse link
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 involved_in ISO
IEA 		(PMID:22511774)
GO_REF:0000107 		RGD
Ensembl		 PMID:22511774 GO_REF:0000107 NCBI chr19:37,744,633...37,831,134
Ensembl chr19:37,744,633...37,829,167 		JBrowse link
G Ap1m1 adaptor related protein complex 1 subunit mu 1 involved_in ISO
IEA 		(PMID:19841138)
GO_REF:0000107 		RGD
Ensembl		 PMID:19841138 GO_REF:0000107 NCBI chr16:17,586,886...17,602,410
Ensembl chr16:17,584,730...17,602,403 		JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in ISO
IEA 		(PMID:22511774)
GO_REF:0000107 		RGD
Ensembl		 PMID:22511774 GO_REF:0000107 NCBI chr 7:9,620,909...9,656,350
Ensembl chr 7:8,970,291...9,005,643 		JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 involved_in ISO
IEA 		(PMID:17182842)
GO_REF:0000107 		RGD
Ensembl		 PMID:17182842 GO_REF:0000107 NCBI chr 1:79,155,873...79,158,247
Ensembl chr 1:79,155,693...79,158,505 		JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 involved_in ISO (PMID:17182842) RGD PMID:17182842 NCBI chr17:26,171,965...26,197,276
Ensembl chr17:26,172,018...26,197,251 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:17182842) 		UniProt
Ensembl
RGD		 PMID:17182842 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:109,816,397...109,826,528
Ensembl chr 3:109,816,366...109,828,308 		JBrowse link
G Cd63 Cd63 molecule involved_in ISO
IEA
ISS 		(PMID:21962903)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:21962903 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:1,325,108...1,340,447
Ensembl chr 7:1,325,103...1,399,178 		JBrowse link
G Rab32 RAB32, member RAS oncogene family involved_in ISO (PMID:22511774) RGD PMID:22511774 NCBI chr 1:4,946,193...4,961,003
Ensembl chr 1:4,945,036...4,960,934 		JBrowse link
G Rab38 RAB38, member RAS oncogene family involved_in ISO
IEA 		(PMID:22511774)
GO_REF:0000107 		RGD
Ensembl		 PMID:22511774 GO_REF:0000107 NCBI chr 1:151,595,153...151,675,492
Ensembl chr 1:142,182,556...142,262,924 		JBrowse link
pigment granule maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd63 Cd63 molecule involved_in ISO
ISS
IEA 		(PMID:21962903)
GO_REF:0000024
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:21962903 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:1,325,108...1,340,447
Ensembl chr 7:1,325,103...1,399,178 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    pigmentation 110
      pigment accumulation 11
        cellular pigment accumulation + 10
        melanization of appressorium wall 0
        pigment accumulation in response to UV light + 0
        pigment accumulation in tissues + 0
        pigment metabolic process involved in pigment accumulation + 0
Path 2
Term Annotations click to browse term
  biological_process 20543
    response to stimulus 11082
      response to external stimulus 2809
        pigment accumulation 11
          cellular pigment accumulation + 10
          melanization of appressorium wall 0
          pigment accumulation in response to UV light + 0
          pigment accumulation in tissues + 0
          pigment metabolic process involved in pigment accumulation + 0
paths to the root