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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of secondary metabolic process
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Accession:GO:0043455 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of secondary metabolism, the chemical reactions and pathways involving compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.
Synonyms:exact_synonym: regulation of secondary metabolism


show annotations for term's descendants           Sort by:
negative regulation of melanin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mfsd12 major facilitator superfamily domain containing 12 involved_in IMP (PMID:29025994) CACAO PMID:29025994 NCBI chr10:81,193,325...81,202,059
Ensembl chr10:81,193,325...81,202,059 		JBrowse link
G Opn3 opsin 3 involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr 1:175,489,993...175,520,198
Ensembl chr 1:175,489,987...175,520,342 		JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor (GEF) 2 involved_in IMP (PMID:16272156) UniProt PMID:16272156 NCBI chr 3:78,969,818...79,194,681
Ensembl chr 3:78,969,823...79,193,824 		JBrowse link
G Slc24a5 solute carrier family 24, member 5 acts_upstream_of_or_within IMP (PMID:18166528) MGI PMID:18166528 NCBI chr 2:124,910,076...124,930,316
Ensembl chr 2:124,910,044...124,930,597 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A involved_in IDA (PMID:23569434) CACAO PMID:23569434 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
positive regulation of melanin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G a nonagouti involved_in IGI (PMID:21949658) CACAO PMID:21949658 NCBI chr 2:154,792,519...154,892,932
Ensembl chr 2:154,633,322...154,892,932 		JBrowse link
G Appl1 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr14:26,640,943...26,692,567
Ensembl chr14:26,640,945...26,693,189 		JBrowse link
G Atp7a ATPase, copper transporting, alpha polypeptide involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr  X:105,070,830...105,171,766
Ensembl chr  X:105,070,882...105,168,532 		JBrowse link
G Cdh3 cadherin 3 involved_in IEA
ISO		 Ensembl
GO_Central		 GO_REF:0000107 GO_REF:0000119 NCBI chr 8:107,237,484...107,283,543
Ensembl chr 8:107,237,523...107,283,929 		JBrowse link
G Gipc1 GIPC PDZ domain containing family, member 1 involved_in ISS
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr 8:84,376,037...84,391,418
Ensembl chr 8:84,379,306...84,391,323 		JBrowse link
G Opn3 opsin 3 involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr 1:175,489,993...175,520,198
Ensembl chr 1:175,489,987...175,520,342 		JBrowse link
G Pmel premelanosome protein involved_in IMP (PMID:21949658) CACAO PMID:21949658 NCBI chr10:128,531,757...128,555,993
Ensembl chr10:128,540,064...128,556,107 		JBrowse link
G Rab38 RAB38, member RAS oncogene family involved_in ISO
IEA		 RGD
GO_Central
Ensembl		 PMID:17043139 GO_REF:0000096 GO_REF:0000107 RGD:152025192 NCBI chr 7:88,079,481...88,140,780
Ensembl chr 7:88,079,481...88,140,780 		JBrowse link
G Rgs19 regulator of G-protein signaling 19 involved_in ISS
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr 2:181,330,212...181,336,330
Ensembl chr 2:181,330,212...181,335,770 		JBrowse link
G Tyrp1 tyrosinase-related protein 1 involved_in ISO
IGI		 (PMID:21949658) GO_Central
CACAO		 PMID:21949658 GO_REF:0000119 NCBI chr 4:80,752,360...80,769,973
Ensembl chr 4:80,752,360...80,769,956 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 involved_in IC (PMID:24769727) BHF-UCL PMID:24769727 NCBI chr 2:44,873,523...45,007,378
Ensembl chr 2:44,873,644...45,007,407 		JBrowse link
regulation of melanin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctns cystinosis, nephropathic involved_in ISS
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr11:73,073,959...73,089,869
Ensembl chr11:73,074,422...73,089,868 		JBrowse link
G Mfsd12 major facilitator superfamily domain containing 12 involved_in IBA
IMP
ISO		 (PMID:33208952) GO_Central
UniProt		 PMID:33208952 GO_REF:0000033 GO_REF:0000119 NCBI chr10:81,193,325...81,202,059
Ensembl chr10:81,193,325...81,202,059 		JBrowse link
G Slc7a11 solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 acts_upstream_of_or_within IMP (PMID:16037214) MGI PMID:16037214 NCBI chr 3:50,319,385...50,403,947
Ensembl chr 3:49,846,975...50,398,063 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28636
    cellular process 18394
      metabolic process 11625
        regulation of metabolic process 6975
          regulation of secondary metabolic process 17
            regulation of fumagillin biosynthetic process + 0
            regulation of gibberellin biosynthetic process + 0
            regulation of juvenile hormone metabolic process + 0
            regulation of melanization defense response + 0
            regulation of penicillin metabolic process + 0
            regulation of phenylpropanoid metabolic process + 0
            regulation of secondary metabolite biosynthetic process + 17
Path 2
Term Annotations click to browse term
  biological_process 28636
    biological regulation 13449
      regulation of biological process 13008
        regulation of cellular process 12633
          regulation of metabolic process 6975
            regulation of secondary metabolic process 17
              regulation of fumagillin biosynthetic process + 0
              regulation of gibberellin biosynthetic process + 0
              regulation of juvenile hormone metabolic process + 0
              regulation of melanization defense response + 0
              regulation of penicillin metabolic process + 0
              regulation of phenylpropanoid metabolic process + 0
              regulation of secondary metabolite biosynthetic process + 17
paths to the root