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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of secondary metabolic process
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Accession:GO:0043455 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of secondary metabolism, the chemical reactions and pathways involving compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.
Synonyms:exact_synonym: regulation of secondary metabolism


show annotations for term's descendants           Sort by:
negative regulation of melanin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MFSD12 major facilitator superfamily domain containing 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:2,570,068...2,583,505
Ensembl chr19:3,520,399...3,532,767 		JBrowse link
G OPN3 opsin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:217,155,765...217,202,577
Ensembl chr 1:222,136,422...222,184,598 		JBrowse link
G RAPGEF2 Rap guanine nucleotide exchange factor 2 involved_in ISO (MGI:5499726|PMID:16272156) UniProt PMID:16272156 MGI:5499726 NCBI chr 4:151,419,402...151,680,769
Ensembl chr 4:163,316,396...163,487,495 		JBrowse link
G SLC24A5 solute carrier family 24 member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18166528) Ensembl
MGI		 PMID:18166528 GO_REF:0000107 NCBI chr15:27,069,937...27,091,619
Ensembl chr15:45,394,090...45,415,823 		JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051 		JBrowse link
positive regulation of melanin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:57,161,299...57,206,672
Ensembl chr 3:58,370,430...58,415,258 		JBrowse link
G ASIP agouti signaling protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:30,583,038...30,592,726
Ensembl chr20:31,718,169...31,727,217 		JBrowse link
G ATP7A ATPase copper transporting alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:67,093,675...67,231,318
Ensembl chr  X:77,255,312...77,342,756 		JBrowse link
G CDH3 cadherin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:49,015,115...49,071,903
Ensembl chr16:68,407,625...68,465,287 		JBrowse link
G GIPC1 GIPC PDZ domain containing family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:14,041,192...14,059,402
Ensembl chr19:14,885,185...14,889,701 		JBrowse link
G OPN3 opsin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:217,155,765...217,202,577
Ensembl chr 1:222,136,422...222,184,598 		JBrowse link
G PMEL premelanosome protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,946,951...32,958,205
Ensembl chr12:33,196,040...33,207,610 		JBrowse link
G RAB38 RAB38, member RAS oncogene family ISO RGD PMID:17043139 RGD:152025192 NCBI chr11:83,121,858...83,183,698
Ensembl chr11:86,710,358...86,773,142 		JBrowse link
G TYRP1 tyrosinase related protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:12,502,610...12,550,203
Ensembl chr 9:12,950,831...12,996,799 		JBrowse link
regulation of melanin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNS cystinosin, lysosomal cystine transporter involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:3,686,903...3,711,857
Ensembl chr17:3,683,575...3,708,253 		JBrowse link
G MFSD12 major facilitator superfamily domain containing 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:2,570,068...2,583,505
Ensembl chr19:3,520,399...3,532,767 		JBrowse link
G SLC7A11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO (PMID:16037214) MGI PMID:16037214 NCBI chr 4:130,529,677...130,601,396
Ensembl chr 4:141,849,343...141,959,849 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16440
    metabolic process 10303
      regulation of metabolic process 6171
        regulation of secondary metabolic process 15
          regulation of abscisic acid biosynthetic process + 0
          regulation of fumagillin biosynthetic process + 0
          regulation of gibberellin biosynthetic process + 0
          regulation of juvenile hormone metabolic process + 0
          regulation of melanization defense response + 0
          regulation of penicillin metabolic process + 0
          regulation of phenylpropanoid metabolic process + 0
          regulation of phytoalexin metabolic process + 0
          regulation of secondary metabolite biosynthetic process + 15
Path 2
Term Annotations click to browse term
  biological_process 16440
    biological regulation 11453
      regulation of biological process 11104
        regulation of metabolic process 6171
          regulation of secondary metabolic process 15
            regulation of abscisic acid biosynthetic process + 0
            regulation of fumagillin biosynthetic process + 0
            regulation of gibberellin biosynthetic process + 0
            regulation of juvenile hormone metabolic process + 0
            regulation of melanization defense response + 0
            regulation of penicillin metabolic process + 0
            regulation of phenylpropanoid metabolic process + 0
            regulation of phytoalexin metabolic process + 0
            regulation of secondary metabolite biosynthetic process + 15
paths to the root