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ONTOLOGY REPORT - ANNOTATIONS


Term:response to alkaloid
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Accession:GO:0043279 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkaloid stimulus. Alkaloids are a large group of nitrogenous substances found in naturally in plants, many of which have extracts that are pharmacologically active.



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response to alkaloid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor IMP RGD PMID:16684876 RGD:1625634 NCBI chr20:13,315,848...13,333,386
Ensembl chr20:13,315,853...13,333,386
JBrowse link
G Bche butyrylcholinesterase IDA RGD PMID:17159811 RGD:1599448 NCBI chr 2:158,308,674...158,401,148
Ensembl chr 2:158,307,584...158,401,148
JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A IEP Berberine RGD PMID:30868489 RGD:25823184 NCBI chr 1:200,564,634...200,627,059
Ensembl chr 1:200,565,613...200,627,055
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP cyclopamine RGD PMID:18772241 RGD:2303053 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338
JBrowse link
G Dhx15 DEAH-box helicase 15 IEP RGD PMID:23275536 RGD:10059614 NCBI chr14:58,787,147...58,825,083
Ensembl chr14:58,787,127...58,825,088
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IEP matrine RGD PMID:23545940 RGD:9685361 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP monocrotaline RGD PMID:15067214 RGD:9068460 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Hsd3b1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 IEP cyclopamine RGD PMID:18772241 RGD:2303053 NCBI chr 2:186,169,864...186,175,984
Ensembl chr 2:186,169,863...186,175,999
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO MGI:1931143 (MGI:3692035|PMID:12970677) RGD PMID:12970677 MGI:3692035 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 IEP Berberine RGD PMID:31432116 RGD:25823187 NCBI chr19:35,295,633...35,310,528
Ensembl chr19:35,295,573...35,310,557
JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 IEP conophylline RGD PMID:15448089 RGD:2311187 NCBI chr12:7,757,865...7,763,064
Ensembl chr12:7,757,865...7,763,064
JBrowse link
G Psmb9 proteasome 20S subunit beta 9 IEP theophylline RGD PMID:16988215 RGD:2303051 NCBI chr20:4,667,044...4,672,512
Ensembl chr20:4,666,046...4,672,512
JBrowse link
G Srsf9 serine and arginine rich splicing factor 9 IEP bicuculline RGD PMID:23275536 RGD:10059614 NCBI chr12:41,278,225...41,284,502
Ensembl chr12:41,275,687...41,284,499
JBrowse link
G Tmed10 transmembrane p24 trafficking protein 10 IEP bacterial alkaloid K252a RGD PMID:9288726 RGD:2317254 NCBI chr 6:104,991,843...105,026,705
Ensembl chr 6:104,991,838...105,026,753
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A IEP RGD PMID:20717874 RGD:5130964 NCBI chr 4:158,150,815...158,163,592
Ensembl chr 4:158,150,820...158,163,591
JBrowse link
G Uqcrc1 ubiquinol-cytochrome c reductase core protein 1 IEP RGD PMID:15732135 RGD:2303353 NCBI chr 8:109,589,735...109,601,481
Ensembl chr 8:109,589,706...109,601,480
JBrowse link
behavioral response to cocaine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase involved_in ISS
ISO
GO_REF:0000024
(MGI:3691518|PMID:10850552)
UniProt
RGD
PMID:10850552 GO_REF:0000024 MGI:3691518 NCBI chr10:6,996,688...7,092,835
Ensembl chr10:6,999,819...7,092,835
JBrowse link
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO MGI:2148638 (MGI:2178201|PMID:11923452) RGD PMID:11923452 MGI:2178201 NCBI chr10:28,255,025...28,373,418
Ensembl chr10:28,255,025...28,312,919
JBrowse link
G Bdnf brain-derived neurotrophic factor IMP RGD PMID:23583595 RGD:38501054 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:3531299|MGI:3720892 (MGI:3764563|PMID:18032670) RGD PMID:18032670 MGI:3764563 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Crebbp CREB binding protein IMP RGD PMID:24555056 RGD:126848805 NCBI chr10:11,335,551...11,461,888
Ensembl chr10:11,335,953...11,461,888
JBrowse link
G Crhr1 corticotropin releasing hormone receptor 1 IMP RGD PMID:21813699 RGD:5147489 NCBI chr10:89,040,203...89,083,481
Ensembl chr10:89,040,203...89,083,481
JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within
involved_in
IMP
ISO
IEA
MGI:3527157 (MGI:3711455|PMID:16014726)
GO_REF:0000107
RGD
Ensembl
PMID:16014726 PMID:16377433 GO_REF:0000107 MGI:3711455, RGD:1581397 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO MGI:2387895 (MGI:3708416|PMID:17426149) RGD PMID:17426149 MGI:3708416 NCBI chr 8:49,708,903...49,772,888
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
G Drd3 dopamine receptor D3 involved_in IMP
ISO
(MGI:4418640|PMID:10432116)
(PMID:8815892)
RGD PMID:8815892 PMID:10432116 PMID:16026479 MGI:4418640, RGD:7175068 NCBI chr11:56,879,689...56,931,901
Ensembl chr11:56,879,689...56,940,596
JBrowse link
G Drd4 dopamine receptor D4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2178631 (MGI:1097029|PMID:9323127), (MGI:3610827|PMID:12783155)
Ensembl
RGD
PMID:9323127 PMID:12783155 GO_REF:0000107 MGI:1097029 MGI:3610827 NCBI chr 1:196,396,366...196,400,824
Ensembl chr 1:196,396,366...196,399,553
JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 acts_upstream_of_or_within ISO MGI:4418499 (MGI:5577209|PMID:24584053) RGD PMID:24584053 MGI:5577209 NCBI chr20:3,919,623...3,936,751
Ensembl chr20:3,919,624...3,941,547
JBrowse link
G Fadd Fas associated via death domain IEP RGD PMID:18580876 RGD:11341804 NCBI chr 1:199,743,200...199,745,746
Ensembl chr 1:199,739,994...199,745,653
JBrowse link
G Homer1 homer scaffold protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3526529 (MGI:3530962|PMID:15294147)
Ensembl
RGD
PMID:15294147 GO_REF:0000107 MGI:3530962 NCBI chr 2:24,542,777...24,645,715
Ensembl chr 2:24,543,093...24,644,785
JBrowse link
G Homer2 homer scaffold protein 2 acts_upstream_of_or_within ISO MGI:3526530 (MGI:3530962|PMID:15294147) RGD PMID:15294147 MGI:3530962 NCBI chr 1:135,558,977...135,659,780
Ensembl chr 1:135,567,414...135,659,772
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A IDA RGD PMID:23390419 RGD:7257659 NCBI chr15:49,950,035...50,022,188
Ensembl chr15:49,950,804...50,020,928
JBrowse link
G Kalrn kalirin, RhoGEF kinase acts_upstream_of_or_within ISO MGI:3831292 (MGI:5289726|PMID:21880917) RGD PMID:21880917 MGI:5289726 NCBI chr11:66,198,155...66,803,166
Ensembl chr11:66,198,173...66,797,610
JBrowse link
G Nos1 nitric oxide synthase 1 IMP RGD PMID:23579428 RGD:7257653 NCBI chr12:38,615,111...38,795,492
Ensembl chr12:38,626,714...38,710,945
JBrowse link
G Oprk1 opioid receptor, kappa 1 IMP RGD PMID:24919534 RGD:9831434 NCBI chr 5:13,860,016...13,877,823
Ensembl chr 5:13,860,021...13,877,823
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 acts_upstream_of_or_within ISO (MGI:5551515|PMID:24449909) RGD PMID:24449909 MGI:5551515 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404
JBrowse link
G Ppp1r1b protein phosphatase 1, regulatory (inhibitor) subunit 1B acts_upstream_of_or_within ISO MGI:3799291 (MGI:3797712|PMID:18496528) RGD PMID:18496528 MGI:3797712 NCBI chr10:83,347,731...83,356,775
Ensembl chr10:83,347,731...83,356,775
JBrowse link
G Sdk1 sidekick cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:5551515|PMID:24449909) RGD PMID:24449909 MGI:5551515 NCBI chr12:12,378,074...13,363,934
Ensembl chr12:12,380,524...13,363,976
JBrowse link
G Snca synuclein alpha IMP RGD PMID:18001274 RGD:2291826 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
cellular response to alkaloid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IEP coptisine, berberine, palmatine RGD PMID:20410605 RGD:8657336 NCBI chr 4:25,357,467...25,529,941
Ensembl chr 4:25,158,362...25,442,709
JBrowse link
G Bcl2l1 Bcl2-like 1 acts_upstream_of_or_within ISO (MGI:3057092|PMID:15231831) RGD PMID:15231831 MGI:3057092 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
JBrowse link
G Ddc dopa decarboxylase IEP asimilobine RGD PMID:18696327 RGD:5129084 NCBI chr14:86,378,685...86,469,189
Ensembl chr14:86,378,685...86,469,208
JBrowse link
G Htr1b 5-hydroxytryptamine receptor 1B involved_in ISO
ISS
(PMID:1315531)
GO_REF:0000024
RGD
UniProt
PMID:1315531 GO_REF:0000024 NCBI chr 8:82,513,572...82,534,892
Ensembl chr 8:82,517,360...82,534,549
JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP berberine RGD PMID:20674665 RGD:4145373 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
JBrowse link
G Mdm2 MDM2 proto-oncogene IEP camptothecin RGD PMID:19136059 RGD:2317366 NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915
JBrowse link
G Mmp1 matrix metallopeptidase 1 IEP berberine RGD PMID:21108488 RGD:7207365 NCBI chr 8:4,658,588...4,679,099
Ensembl chr 8:4,658,588...4,679,097
JBrowse link
G Rad51 RAD51 recombinase acts_upstream_of_or_within ISO MGI:5444025|MGI:5444027 (MGI:5442243|PMID:22778135) RGD PMID:22778135 MGI:5442243 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035
JBrowse link
G Star steroidogenic acute regulatory protein IEP evodiamine, rutaecarpine RGD PMID:19639602 RGD:4145624 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
G Th tyrosine hydroxylase IEP asimilobine RGD PMID:18696327 RGD:5129084 NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 involved_in IMP PMID:17582331 UniProt PMID:17582331 RGD:8553505 NCBI chr10:57,851,428...57,876,513
Ensembl chr10:57,851,428...57,876,513
JBrowse link
cellular response to caffeine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1s calcium voltage-gated channel subunit alpha1 S involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr13:47,493,949...47,564,194
Ensembl chr13:47,493,949...47,564,318
JBrowse link
G Casq2 calsequestrin 2 involved_in ISO
IEA
(PMID:16908766)
GO_REF:0000107
RGD
Ensembl
PMID:16908766 GO_REF:0000107 NCBI chr 2:189,526,003...189,582,276
Ensembl chr 2:189,525,960...189,582,267
JBrowse link
G Chek1 checkpoint kinase 1 IEP RGD PMID:11278490 RGD:2316109 NCBI chr 8:36,420,565...36,443,477 JBrowse link
G Gstm2 glutathione S-transferase mu 2 involved_in ISO
IEA
(PMID:22406107)
GO_REF:0000107
RGD
Ensembl
PMID:22406107 GO_REF:0000107 NCBI chr 2:195,624,015...195,628,774 JBrowse link
G Gstm7 glutathione S-transferase, mu 7 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:195,566,701...195,572,149
Ensembl chr 2:195,566,701...195,572,203
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:17516843 RGD:10059651 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Ryr1 ryanodine receptor 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:74313|PMID:7621815)
GO_REF:0000024
(PMID:16163667), (PMID:26115329)
Ensembl
RGD
UniProt
PMID:7621815 PMID:16163667 PMID:26115329 GO_REF:0000024 GO_REF:0000107 MGI:74313 NCBI chr 1:84,292,578...84,423,799
Ensembl chr 1:84,292,578...84,423,812
JBrowse link
G Ryr2 ryanodine receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
(MGI:2182484|PMID:12089338)
(MGI:1267127|PMID:9628868), (MGI:5431202|PMID:22406107)
GO_REF:0000024
(PMID:12919952)
Ensembl
RGD
UniProt
PMID:9628868 PMID:12089338 PMID:12919952 PMID:22406107 GO_REF:0000024 GO_REF:0000107 MGI:1267127 MGI:2182484 MGI:5431202 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142
JBrowse link
G Selenon selenoprotein N acts_upstream_of_or_within ISO (MGI:5494499|PMID:23325319) RGD PMID:23325319 MGI:5494499 NCBI chr 5:146,748,638...146,764,656
Ensembl chr 5:146,748,652...146,763,059
JBrowse link
G Slc8a1 solute carrier family 8 member A1 involved_in ISO (MGI:1927695|PMID:10967099) RGD PMID:10967099 MGI:1927695 NCBI chr 6:13,194,609...13,547,369
Ensembl chr 6:13,194,662...13,535,628
JBrowse link
G Tmem38a transmembrane protein 38a involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1098718 (MGI:3715564|PMID:17611541)
Ensembl
RGD
PMID:17611541 GO_REF:0000107 MGI:3715564 NCBI chr16:17,258,160...17,274,204
Ensembl chr16:17,258,164...17,273,415
JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO MGI:1921416 (MGI:3715564|PMID:17611541) RGD PMID:17611541 MGI:3715564 NCBI chr 5:68,460,304...68,496,026
Ensembl chr 5:68,460,304...68,496,025
JBrowse link
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 IEP RGD PMID:22319196 RGD:10043374 NCBI chr 5:4,379,999...4,433,243
Ensembl chr 5:4,379,999...4,433,570
JBrowse link
cellular response to camptothecin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase involved_in ISO (PMID:23509288) RGD PMID:23509288 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312
JBrowse link
G Fancb FA complementation group B acts_upstream_of_or_within ISO MGI:2156841 (MGI:5648586|PMID:25520194) RGD PMID:25520194 MGI:5648586 NCBI chr  X:29,403,771...29,420,484
Ensembl chr  X:29,403,771...29,420,192
JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:23509288) RGD PMID:23509288 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035
JBrowse link
G Recql5 RecQ like helicase 5 acts_upstream_of_or_within ISO MGI:2448558 (MGI:5648586|PMID:25520194) RGD PMID:25520194 MGI:5648586 NCBI chr10:101,126,544...101,165,739
Ensembl chr10:101,126,547...101,165,652
JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO (PMID:23509288) RGD PMID:23509288 NCBI chr11:84,766,593...85,007,597
Ensembl chr11:84,766,593...85,007,600
JBrowse link
cellular response to cocaine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccna2 cyclin A2 IEP RGD PMID:18593214 RGD:10054470 NCBI chr 2:119,427,239...119,433,645
Ensembl chr 2:119,426,089...119,433,577
JBrowse link
G Crh corticotropin releasing hormone involved_in IDA PMID:14751291 UniProt PMID:14751291 RGD:8553798 NCBI chr 2:102,143,055...102,144,919
Ensembl chr 2:102,143,055...102,144,919
JBrowse link
G Crhbp corticotropin releasing hormone binding protein involved_in IDA PMID:14751291 UniProt PMID:14751291 RGD:8553798 NCBI chr 2:26,692,403...26,704,710
Ensembl chr 2:26,692,403...26,704,710
JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 acts_upstream_of_or_within ISO (MGI:5577209|PMID:24584053) RGD PMID:24584053 MGI:5577209 NCBI chr20:3,919,623...3,936,751
Ensembl chr20:3,919,624...3,941,547
JBrowse link
G Ppp1r1b protein phosphatase 1, regulatory (inhibitor) subunit 1B acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:3799291 (MGI:3797712|PMID:18496528)
GO_REF:0000107
RGD
Ensembl
PMID:18496528 GO_REF:0000107 MGI:3797712 NCBI chr10:83,347,731...83,356,775
Ensembl chr10:83,347,731...83,356,775
JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in ISO (MGI:6492416|PMID:27208619) RGD PMID:27208619 MGI:6492416 NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402
JBrowse link
G Slc1a2 solute carrier family 1 member 2 involved_in ISO (MGI:6492416|PMID:27208619) RGD PMID:27208619 MGI:6492416 NCBI chr 3:89,005,129...89,126,498
Ensembl chr 3:89,005,129...89,126,498
JBrowse link
G Slc1a3 solute carrier family 1 member 3 involved_in IEA
ISO
GO_REF:0000107
(MGI:6492416|PMID:27208619)
Ensembl
RGD
PMID:27208619 GO_REF:0000107 MGI:6492416 NCBI chr 2:57,755,495...57,830,605
Ensembl chr 2:57,755,497...57,830,605
JBrowse link
G Tgm2 transglutaminase 2 involved_in ISO (PMID:32273471) RGD PMID:32273471 NCBI chr 3:146,772,684...146,801,924
Ensembl chr 3:146,772,687...146,801,981
JBrowse link
cellular response to isoquinoline alkaloid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr1 early growth response 1 IEP berberine RGD PMID:16448624 RGD:5131909 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Mecp2 methyl CpG binding protein 2 IDA bicuculline RGD PMID:22262897 RGD:12790719 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
cellular response to morphine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy8 adenylate cyclase 8 involved_in IEA
ISO
ISS
IDA
GO_REF:0000107
(MGI:3808962|PMID:18222416)
GO_REF:0000024
PMID:16186630
Ensembl
RGD
UniProt
PMID:18222416 PMID:16186630 GO_REF:0000024 GO_REF:0000107 MGI:3808962, RGD:13825193 NCBI chr 7:96,417,310...96,665,911
Ensembl chr 7:96,417,324...96,665,911
JBrowse link
G Aif1 allograft inflammatory factor 1 IEP morphine RGD PMID:19176808 RGD:2313012 NCBI chr20:3,646,784...3,652,670
Ensembl chr20:3,646,777...3,652,668
JBrowse link
G Atg7 autophagy related 7 IEP RGD PMID:23800874 RGD:11557986 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 IEP RGD PMID:20578038 RGD:4889899 NCBI chr10:68,322,826...68,327,365
Ensembl chr10:68,322,829...68,327,377
JBrowse link
G Kcnj6 potassium inwardly-rectifying channel, subfamily J, member 6 IEP RGD PMID:18178009 RGD:6483056 NCBI chr11:34,061,705...34,309,128
Ensembl chr11:34,061,708...34,308,758
JBrowse link
G Oprm1 opioid receptor, mu 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:43,160,057...43,413,409
Ensembl chr 1:43,160,057...43,413,409
JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B involved_in ISS
ISO
GO_REF:0000024
(MGI:3834288|PMID:18439408)
UniProt
RGD
PMID:18439408 GO_REF:0000024 MGI:3834288 NCBI chr10:79,938,055...79,954,085
Ensembl chr10:79,938,066...79,954,083
JBrowse link
G RT1-Bb RT1 class II, locus Bb IEP RGD PMID:14742686 RGD:7488923 NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
JBrowse link
cellular response to staurosporine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp3 caspase 3 involved_in ISO (PMID:22253444) RGD PMID:22253444 NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648
JBrowse link
G Casp6 caspase 6 involved_in ISO
IEA
(PMID:22253444)
GO_REF:0000107
RGD
Ensembl
PMID:22253444 GO_REF:0000107 NCBI chr 2:218,466,063...218,478,503
Ensembl chr 2:218,466,076...218,478,502
JBrowse link
G Casp7 caspase 7 involved_in ISO (PMID:22253444) RGD PMID:22253444 NCBI chr 1:255,437,195...255,476,737
Ensembl chr 1:255,437,172...255,476,729
JBrowse link
G Plau plasminogen activator, urokinase IEP RGD PMID:19137075 RGD:7241807 NCBI chr15:3,456,230...3,462,732
Ensembl chr15:3,456,232...3,462,775
JBrowse link
G Slc34a1 solute carrier family 34 member 1 IEP RGD PMID:10332085 RGD:7243183 NCBI chr17:9,218,876...9,233,852
Ensembl chr17:9,218,876...9,233,852
JBrowse link
response to caffeine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor IDA RGD PMID:16481441 RGD:1625231 NCBI chr20:13,315,848...13,333,386
Ensembl chr20:13,315,853...13,333,386
JBrowse link
G Bcl2 BCL2, apoptosis regulator IEP RGD PMID:17236787 RGD:1599474 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase IEP RGD PMID:6149265 RGD:2303533 NCBI chr 6:25,292,133...25,315,176
Ensembl chr 6:25,292,133...25,319,861
JBrowse link
G Dhodh dihydroorotate dehydrogenase (quinone) IEP RGD PMID:6149265 RGD:2303533 NCBI chr19:37,551,858...37,573,327
Ensembl chr19:37,558,177...37,591,654
JBrowse link
G Dnmt1 DNA methyltransferase 1 IEP RGD PMID:24717552 RGD:9590296 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta IEP RGD PMID:24717552 RGD:9590296 NCBI chr 3:142,130,592...142,169,124
Ensembl chr 3:142,130,592...142,169,124
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IEP RGD PMID:12834266 RGD:9685460 NCBI chr 1:239,425,515...239,552,323
Ensembl chr 1:239,425,430...239,552,317
JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A acts_upstream_of_or_within ISO MGI:2182095|MGI:3514012 (MGI:3513875|PMID:15289441) RGD PMID:15289441 MGI:3513875 NCBI chr 3:140,040,359...140,060,107
Ensembl chr 3:140,040,278...140,060,743
JBrowse link
G Gnal G protein subunit alpha L acts_upstream_of_or_within ISO MGI:2151207 (MGI:3719553|PMID:11404425) RGD PMID:11404425 MGI:3719553 NCBI chr18:60,622,311...60,762,599
Ensembl chr18:60,622,311...60,762,599
JBrowse link
G Hdac1 histone deacetylase 1 IEP RGD PMID:24717552 RGD:9590296 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hdac2 histone deacetylase 2 IEP RGD PMID:24717552 RGD:9590296 NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Igf1 insulin-like growth factor 1 IEP RGD PMID:22995397 RGD:8661261 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
G Il6 interleukin 6 IEP Cell shortening response decreased RGD PMID:15845578 RGD:2306941 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
JBrowse link
G Irs1 insulin receptor substrate 1 IDA
IEP
RGD PMID:21940847 PMID:22995397 RGD:6483017, RGD:8661261 NCBI chr 9:83,552,964...83,605,797
Ensembl chr 9:83,548,944...83,606,122
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma IEP RGD PMID:18486259 RGD:2301880 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 IDA RGD PMID:19608206 RGD:2316809 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 IDA RGD PMID:19608206 RGD:2316809 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G Prss1 serine protease 1 IDA RGD PMID:2726780 RGD:1599974 NCBI chr 4:70,364,589...70,367,792
Ensembl chr 4:70,364,586...70,367,792
JBrowse link
G Ryr1 ryanodine receptor 1 involved_in IDA PMID:19116207 BHF-UCL PMID:19116207 RGD:7242196 NCBI chr 1:84,292,578...84,423,799
Ensembl chr 1:84,292,578...84,423,812
JBrowse link
G Ryr2 ryanodine receptor 2 involved_in
acts_upstream_of_or_within
ISO (PMID:17921453)
(MGI:3027171|PMID:14593104)
(MGI:1345009|PMID:10473538)
RGD PMID:10473538 PMID:14593104 PMID:17921453 MGI:1345009 MGI:3027171 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142
JBrowse link
G Sdc2 syndecan 2 IEP RGD PMID:16458123 RGD:2311709 NCBI chr 7:64,127,185...64,239,885
Ensembl chr 7:64,127,110...64,241,081
JBrowse link
G Tp53 tumor protein p53 IEP RGD PMID:16544096 RGD:2290579 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
response to camptothecin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO (MGI:4822286|PMID:20647423) RGD PMID:20647423 MGI:4822286 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
response to cocaine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IMP RGD PMID:12373739 RGD:1598515 NCBI chr10:6,996,688...7,092,835
Ensembl chr10:6,999,819...7,092,835
JBrowse link
G Adgrl3 adhesion G protein-coupled receptor L3 involved_in ISO (MGI:5430447|PMID:22575564) RGD PMID:22575564 MGI:5430447 NCBI chr14:26,336,320...27,104,060
Ensembl chr14:26,368,277...27,105,860
JBrowse link
G Adra1a adrenoceptor alpha 1A ISO RGD RGD:11556240 NCBI chr15:40,830,125...40,935,902
Ensembl chr15:40,832,534...40,927,500
JBrowse link
G Bax BCL2 associated X, apoptosis regulator IEP RGD PMID:17084983 RGD:2293080 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
JBrowse link
G Cacng4 calcium voltage-gated channel auxiliary subunit gamma 4 IDA RGD PMID:21276808 RGD:13524552 NCBI chr10:92,686,100...92,745,601
Ensembl chr10:92,683,761...92,746,126
JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO (MGI:3033267|PMID:14769920) RGD PMID:14769920 MGI:3033267 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:1926253 (MGI:3618656|PMID:11282258) RGD PMID:11282258 MGI:3618656 NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619
JBrowse link
G Cnr1 cannabinoid receptor 1 IMP RGD PMID:19401177 RGD:2314673 NCBI chr 5:48,408,543...48,436,099
Ensembl chr 5:48,408,574...48,435,099
JBrowse link
G Crh corticotropin releasing hormone IEP RGD PMID:21762287 RGD:5490536 NCBI chr 2:102,143,055...102,144,919
Ensembl chr 2:102,143,055...102,144,919
JBrowse link
G Dnm2 dynamin 2 IEP RGD PMID:19562697 RGD:9685177 NCBI chr 8:19,978,313...20,060,162
Ensembl chr 8:19,978,400...20,060,157
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha IEP RGD PMID:23688924 RGD:9589062 NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta IEP RGD PMID:23688924 RGD:9589062 NCBI chr 3:142,130,592...142,169,124
Ensembl chr 3:142,130,592...142,169,124
JBrowse link
G Dpysl2 dihydropyrimidinase-like 2 IEP RGD PMID:19457111 RGD:2316242 NCBI chr15:41,005,551...41,111,724
Ensembl chr15:41,005,551...41,111,829
JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within ISO MGI:1857158|MGI:2159306 (MGI:1098091|PMID:9387887), (MGI:1351083|PMID:10661513), (MGI:2137377|PMID:10222120), (MGI:3663985|PMID:16908842), (MGI:3761901|PMID:12354293), (MGI:3765089|PMID:18045908) RGD PMID:9387887 PMID:10222120 PMID:10661513 PMID:12354293 PMID:16908842 More... MGI:1098091 MGI:1351083 MGI:2137377 MGI:3663985 MGI:3761901 MGI:3765089 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO MGI:2387895 (MGI:3655899|PMID:11943831)
MGI:1857875|MGI:2387895 (MGI:2178200|PMID:11923462), (MGI:3610742|PMID:12185400), (MGI:3811680|PMID:18671743)
RGD PMID:11923462 PMID:11943831 PMID:12185400 PMID:18671743 MGI:2178200 MGI:3610742 MGI:3655899 MGI:3811680 NCBI chr 8:49,708,903...49,772,888
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
G Drd3 dopamine receptor D3 involved_in
acts_upstream_of_or_within
ISO (PMID:10415668)
MGI:1857159 (MGI:3610635|PMID:10943692)
RGD PMID:10415668 PMID:10943692 MGI:3610635 NCBI chr11:56,879,689...56,931,901
Ensembl chr11:56,879,689...56,940,596
JBrowse link
G Drd5 dopamine receptor D5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3528074 (MGI:3610834|PMID:12768268)
Ensembl
RGD
PMID:12768268 GO_REF:0000107 MGI:3610834 NCBI chr14:72,489,347...72,490,774
Ensembl chr14:72,489,347...72,490,774
JBrowse link
G Eftud2 elongation factor Tu GTP binding domain containing 2 IEP RGD PMID:20187946 RGD:10045569 NCBI chr10:87,804,893...87,852,181
Ensembl chr10:87,804,892...87,846,079
JBrowse link
G Egr1 early growth response 1 IEP RGD PMID:21334415 RGD:5131659 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Elavl4 ELAV like RNA binding protein 4 IEP RGD PMID:19014379 RGD:9685328 NCBI chr 5:125,056,848...125,200,543
Ensembl chr 5:125,056,848...125,200,446
JBrowse link
G En1 engrailed homeobox 1 IEP RGD PMID:17070804 RGD:5687200 NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943
JBrowse link
G Fadd Fas associated via death domain IEP RGD PMID:21925237 RGD:11341806 NCBI chr 1:199,743,200...199,745,746
Ensembl chr 1:199,739,994...199,745,653
JBrowse link
G Fmr1 FMRP translational regulator 1 IEP RGD PMID:24810662 RGD:11667955 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 IEP RGD PMID:20600170 RGD:4107066 NCBI chr10:41,210,713...41,527,283
Ensembl chr10:41,210,713...41,527,283
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEP RGD PMID:19322657 RGD:2326006 NCBI chr10:5,630,684...6,043,341
Ensembl chr10:5,631,369...6,044,637
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IEP RGD PMID:19322657 RGD:2326006 NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279
JBrowse link
G Grk5 G protein-coupled receptor kinase 5 IEP RGD PMID:25213649 RGD:13514050 NCBI chr 1:260,028,269...260,223,699
Ensembl chr 1:260,028,242...260,218,701
JBrowse link
G Grm2 glutamate metabotropic receptor 2 IMP RGD PMID:28700935 RGD:38501064 NCBI chr 8:107,280,099...107,293,159
Ensembl chr 8:107,280,099...107,293,146
JBrowse link
G Hdac2 histone deacetylase 2 IEP RGD PMID:16670375 RGD:2306447 NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Hdac5 histone deacetylase 5 acts_upstream_of_or_within IEP
ISO
MGI:3056065 (MGI:3775380|PMID:17988634) RGD PMID:17988634 PMID:21954104 MGI:3775380, RGD:9681462 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
JBrowse link
G Hnmt histamine N-methyltransferase IEP RGD PMID:9231750 RGD:2316833 NCBI chr 3:6,591,804...6,623,821
Ensembl chr 3:6,591,463...6,624,012
JBrowse link
G Homer1 homer scaffold protein 1 IEP RGD PMID:18932227 RGD:2316855 NCBI chr 2:24,542,777...24,645,715
Ensembl chr 2:24,543,093...24,644,785
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 IEP RGD PMID:22860061 RGD:10445834 NCBI chr 6:129,702,376...129,707,907
Ensembl chr 6:129,702,383...129,707,268
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 IEP RGD PMID:22860061 RGD:10445834 NCBI chr 9:15,432,986...15,438,358
Ensembl chr 9:15,433,691...15,438,488
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 IEP RGD PMID:17849098 RGD:2311462 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 IEP RGD PMID:14557723 RGD:1624249 NCBI chr 9:56,579,195...56,590,011
Ensembl chr 9:56,579,201...56,589,662
JBrowse link
G Htr1b 5-hydroxytryptamine receptor 1B IDA RGD PMID:17509084 RGD:1626452 NCBI chr 8:82,513,572...82,534,892
Ensembl chr 8:82,517,360...82,534,549
JBrowse link
G Htr3a 5-hydroxytryptamine receptor 3A IEP RGD PMID:17105936 RGD:2316965 NCBI chr 8:49,242,018...49,254,475
Ensembl chr 8:49,242,020...49,254,389
JBrowse link
G Mbd1 methyl-CpG binding domain protein 1 IEP RGD PMID:16670375 RGD:2306447 NCBI chr18:67,869,870...67,884,501
Ensembl chr18:67,869,992...67,886,554
JBrowse link
G Mdm2 MDM2 proto-oncogene IEP RGD PMID:14625023 RGD:2317407 NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915
JBrowse link
G Mecp2 methyl CpG binding protein 2 IDA
IEP
RGD PMID:23688924 PMID:20711185 RGD:9589062, RGD:12789445 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Mt-nd6 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 IEP RGD PMID:9261805 RGD:8657132 NCBI chr MT:13,543...14,061
Ensembl chr MT:13,543...14,061
JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:20977929 RGD:10040960 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Ncam1 neural cell adhesion molecule 1 IDA RGD PMID:16081054 RGD:2325998 NCBI chr 8:49,865,629...50,165,687
Ensembl chr 8:49,865,633...50,166,014
JBrowse link
G Nefh neurofilament heavy chain IEP RGD PMID:24507117 RGD:9693734 NCBI chr14:79,830,362...79,840,347
Ensembl chr14:79,830,362...79,840,351
JBrowse link
G Nts neurotensin IEP RGD PMID:11182247 RGD:9727458 NCBI chr 7:37,564,944...37,574,350
Ensembl chr 7:37,564,533...37,574,423
JBrowse link
G Oprk1 opioid receptor, kappa 1 IEP RGD PMID:10554970 PMID:9645969 RGD:9831419, RGD:9831421 NCBI chr 5:13,860,016...13,877,823
Ensembl chr 5:13,860,021...13,877,823
JBrowse link
G Oprm1 opioid receptor, mu 1 IEP RGD PMID:17425581 RGD:2316610 NCBI chr 1:43,160,057...43,413,409
Ensembl chr 1:43,160,057...43,413,409
JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide IEP RGD PMID:18609307 RGD:2304103 NCBI chr 3:117,782,650...117,783,490
Ensembl chr 3:117,782,650...117,783,490
JBrowse link
G Oxtr oxytocin receptor IEP RGD PMID:16677710 RGD:2304172 NCBI chr 4:145,598,549...145,614,674
Ensembl chr 4:145,599,561...145,614,674
JBrowse link
G Pgr progesterone receptor IDA RGD PMID:17109827 RGD:7248706 NCBI chr 8:6,073,216...6,131,552
Ensembl chr 8:6,072,673...6,131,344
JBrowse link
G Pitx3 paired-like homeodomain 3 IEP RGD PMID:17070804 RGD:5687200 NCBI chr 1:245,001,106...245,013,881
Ensembl chr 1:245,001,164...245,013,892
JBrowse link
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A IEP RGD PMID:23644055 RGD:9999166 NCBI chr 1:96,000,053...96,003,128
Ensembl chr 1:96,000,058...96,003,171
JBrowse link
G Ppp1r1b protein phosphatase 1, regulatory (inhibitor) subunit 1B IDA RGD PMID:26142455 RGD:13514094 NCBI chr10:83,347,731...83,356,775
Ensembl chr10:83,347,731...83,356,775
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IEP RGD PMID:12117546 RGD:1642634 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
JBrowse link
G Rgs4 regulator of G-protein signaling 4 IEP RGD PMID:17632279 RGD:13524536 NCBI chr13:81,936,775...81,943,103
Ensembl chr13:81,936,775...81,943,068
JBrowse link
G Slc18a2 solute carrier family 18 member A2 IEP RGD PMID:19038779 RGD:5130996 NCBI chr 1:258,413,748...258,449,143
Ensembl chr 1:258,413,959...258,448,325
JBrowse link
G Slc6a1 solute carrier family 6 member 1 IEP RGD PMID:12832547 RGD:1643213 NCBI chr 4:147,448,961...147,482,295
Ensembl chr 4:147,466,965...147,482,293
JBrowse link
G Slc6a3 solute carrier family 6 member 3 acts_upstream_of_or_within ISO (MGI:3811680|PMID:18671743) RGD PMID:18671743 MGI:3811680 NCBI chr 1:29,709,443...29,750,413
Ensembl chr 1:29,709,443...29,750,413
JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 IDA RGD PMID:14736491 RGD:1601348 NCBI chr 1:159,892,946...159,896,789
Ensembl chr 1:159,892,859...159,896,794
JBrowse link
G Snca synuclein alpha IEP RGD PMID:14622225 RGD:6218992 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
G Sncg synuclein, gamma IEP RGD PMID:14622225 RGD:6218992 NCBI chr16:9,700,513...9,705,751
Ensembl chr16:9,700,514...9,705,368
JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 IEP RGD PMID:21536109 RGD:27372882 NCBI chr 1:127,766,669...127,838,017
Ensembl chr 1:127,762,573...127,838,091
JBrowse link
G Tacr3 tachykinin receptor 3 IMP RGD PMID:17445241 RGD:2305931 NCBI chr 2:223,266,536...223,363,791
Ensembl chr 2:223,266,536...223,363,791
JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 IEP RGD PMID:23745104 RGD:10043322 NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
JBrowse link
G Ube3a ubiquitin protein ligase E3A IEP RGD PMID:24810662 RGD:11667955 NCBI chr 1:110,070,260...110,161,675
Ensembl chr 1:110,070,480...110,157,250
JBrowse link
response to codeine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IEP RGD PMID:24914722 RGD:11041146 NCBI chr 4:25,357,467...25,529,941
Ensembl chr 4:25,158,362...25,442,709
JBrowse link
response to isoquinoline alkaloid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IEP oxycodone RGD PMID:23439660 RGD:11041186 NCBI chr 4:25,357,467...25,529,941
Ensembl chr 4:25,158,362...25,442,709
JBrowse link
response to morphine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IEP RGD PMID:26554626 RGD:11041102 NCBI chr 4:25,357,467...25,529,941
Ensembl chr 4:25,158,362...25,442,709
JBrowse link
G Abcg2 ATP binding cassette subfamily G member 2 IEP RGD PMID:22845665 RGD:11099987 NCBI chr 4:87,676,241...87,802,757
Ensembl chr 4:87,745,319...87,802,409
JBrowse link
G Ada adenosine deaminase IMP RGD PMID:19934879 RGD:5128863 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
JBrowse link
G Adcy5 adenylate cyclase 5 IEP RGD PMID:18801381 RGD:13464135 NCBI chr11:65,471,612...65,618,877
Ensembl chr11:65,471,612...65,618,974
JBrowse link
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO MGI:2148638 (MGI:2178201|PMID:11923452) RGD PMID:11923452 MGI:2178201 NCBI chr10:28,255,025...28,373,418
Ensembl chr10:28,255,025...28,312,919
JBrowse link
G Cnr1 cannabinoid receptor 1 IMP RGD PMID:19804815 PMID:19463710 RGD:2314642, RGD:2314667 NCBI chr 5:48,408,543...48,436,099
Ensembl chr 5:48,408,574...48,435,099
JBrowse link
G Csnk1a1 casein kinase 1, alpha 1 IEP RGD PMID:18657552 RGD:10059657 NCBI chr18:55,017,049...55,050,184
Ensembl chr18:55,017,055...55,049,271
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 IEP RGD PMID:28108674 RGD:13463594 NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IEP RGD PMID:20977699 RGD:4890043 NCBI chr 8:54,553,165...54,580,758
Ensembl chr 8:54,553,165...54,580,758
JBrowse link
G Drd1 dopamine receptor D1 IEP RGD PMID:23775491 RGD:7248563 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO MGI:1857875|MGI:2387895|MGI:2388386|MGI:2656648 (MGI:2151226|PMID:11567069), (MGI:2178015|PMID:11264672), (MGI:3576272|PMID:12182883), (MGI:3653553|PMID:9252189)
MGI:2387895 (MGI:3655899|PMID:11943831)
RGD PMID:9252189 PMID:11264672 PMID:11567069 PMID:11943831 PMID:12182883 MGI:2151226 MGI:2178015 MGI:3576272 MGI:3653553 MGI:3655899 NCBI chr 8:49,708,903...49,772,888
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
G Drd3 dopamine receptor D3 acts_upstream_of_or_within ISO MGI:1857159 (MGI:2450222|PMID:12574430) RGD PMID:12574430 MGI:2450222 NCBI chr11:56,879,689...56,931,901
Ensembl chr11:56,879,689...56,940,596
JBrowse link
G Ednra endothelin receptor type A IMP RGD PMID:16293342 PMID:16741068 RGD:1581828, RGD:4892606 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IEP RGD PMID:20553911 RGD:9685461 NCBI chr 1:239,425,515...239,552,323
Ensembl chr 1:239,425,430...239,552,317
JBrowse link
G Fadd Fas associated via death domain IDA RGD PMID:21088039 RGD:11341805 NCBI chr 1:199,743,200...199,745,746
Ensembl chr 1:199,739,994...199,745,653
JBrowse link
G Fga fibrinogen alpha chain IEP in conjunction with memory test RGD PMID:24855564 RGD:9685019 NCBI chr 2:168,365,364...168,381,533
Ensembl chr 2:168,374,120...168,381,528
JBrowse link
G Fosb FosB proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:15772255 RGD:2293776 NCBI chr 1:78,954,312...78,961,492
Ensembl chr 1:78,954,115...78,961,465
JBrowse link
G Ghr growth hormone receptor IEP RGD PMID:11335057 RGD:2307381 NCBI chr 2:52,541,452...52,804,960
Ensembl chr 2:52,542,594...52,804,735
JBrowse link
G Gnao1 G protein subunit alpha o1 IEP RGD PMID:8458398 RGD:2302014 NCBI chr19:11,034,874...11,192,502
Ensembl chr19:11,035,956...11,192,493
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 IEP RGD PMID:24528483 RGD:13506244 NCBI chr19:9,174,304...9,199,995
Ensembl chr19:9,174,311...9,199,994
JBrowse link
G Gpi glucose-6-phosphate isomerase IMP RGD PMID:6447740 RGD:11051960 NCBI chr 1:86,828,211...86,856,077
Ensembl chr 1:86,828,216...86,856,086
JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO MGI:1928270 (MGI:3797147|PMID:18423864) RGD PMID:18423864 MGI:3797147 NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 IEP RGD PMID:29081032 RGD:13506833 NCBI chr 1:201,581,480...201,601,580
Ensembl chr 1:201,581,480...201,601,582
JBrowse link
G Grk3 G protein-coupled receptor kinase 3 IEP RGD PMID:29081032 RGD:13506833 NCBI chr12:43,624,778...43,735,375
Ensembl chr12:43,624,897...43,731,262
JBrowse link
G Grk5 G protein-coupled receptor kinase 5 IEP RGD PMID:12384166 RGD:727454 NCBI chr 1:260,028,269...260,223,699
Ensembl chr 1:260,028,242...260,218,701
JBrowse link
G Il1b interleukin 1 beta IEP RGD PMID:15317861 RGD:1626676 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha IEP RGD PMID:20190558 RGD:11560529 NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
JBrowse link
G Mdm2 MDM2 proto-oncogene IEP RGD PMID:14625023 RGD:2317407 NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915
JBrowse link
G Mir338 microRNA 338 IEP RGD PMID:28108674 RGD:13463594 NCBI chr10:105,297,923...105,297,988 JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:24382350 RGD:10040983 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Npff neuropeptide FF-amide peptide precursor IEP RGD PMID:15207282 RGD:2316569 NCBI chr 7:133,654,530...133,655,319 JBrowse link
G Oprk1 opioid receptor, kappa 1 IEP RGD PMID:16753266 RGD:9831397 NCBI chr 5:13,860,016...13,877,823
Ensembl chr 5:13,860,021...13,877,823
JBrowse link
G Oprm1 opioid receptor, mu 1 IEP RGD PMID:16194531 PMID:16753266 RGD:2316627, RGD:9831397 NCBI chr 1:43,160,057...43,413,409
Ensembl chr 1:43,160,057...43,413,409
JBrowse link
G Pcsk1 proprotein convertase subtilisin/kexin type 1 IEP RGD PMID:18771713 RGD:2308891 NCBI chr 2:4,395,543...4,442,434
Ensembl chr 2:4,395,543...4,442,434
JBrowse link
G Pea15 proliferation and apoptosis adaptor protein 15 IEP RGD PMID:19758790 RGD:2326031 NCBI chr13:84,657,815...84,667,437
Ensembl chr13:84,654,870...84,667,499
JBrowse link
G Penk proenkephalin IEP RGD PMID:23300784 RGD:10003095 NCBI chr 5:17,183,799...17,189,160
Ensembl chr 5:17,183,806...17,189,129
JBrowse link
G Pitx3 paired-like homeodomain 3 IEP RGD PMID:23215787 RGD:11535121 NCBI chr 1:245,001,106...245,013,881
Ensembl chr 1:245,001,164...245,013,892
JBrowse link
G Plcg1 phospholipase C, gamma 1 IEP RGD PMID:17524370 RGD:2299883 NCBI chr 3:149,385,587...149,416,330
Ensembl chr 3:149,385,587...149,416,330
JBrowse link
G Ppp1r1b protein phosphatase 1, regulatory (inhibitor) subunit 1B acts_upstream_of_or_within ISO MGI:3799291 (MGI:3797712|PMID:18496528) RGD PMID:18496528 MGI:3797712 NCBI chr10:83,347,731...83,356,775
Ensembl chr10:83,347,731...83,356,775
JBrowse link
G Ppp2r2a protein phosphatase 2, regulatory subunit B, alpha acts_upstream_of_or_within ISO (MGI:3588907|PMID:16102737) RGD PMID:16102737 MGI:3588907 NCBI chr15:41,204,659...41,263,924
Ensembl chr15:41,204,200...41,263,924
JBrowse link
G Ppp5c protein phosphatase 5, catalytic subunit acts_upstream_of_or_within ISO (MGI:3588907|PMID:16102737) RGD PMID:16102737 MGI:3588907 NCBI chr 1:77,690,203...77,714,507
Ensembl chr 1:77,690,208...77,714,456
JBrowse link
G Prkce protein kinase C, epsilon acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2152043 (MGI:3798724|PMID:16899053)
GO_REF:0000107
RGD
Ensembl
PMID:16899053 GO_REF:0000107 MGI:3798724 NCBI chr 6:7,965,048...8,451,966
Ensembl chr 6:7,965,048...8,451,719
JBrowse link
G Prkcg protein kinase C, gamma involved_in ISS
ISO
GO_REF:0000024
(MGI:3760696|PMID:11246146)
UniProt
RGD
PMID:11246146 GO_REF:0000024 MGI:3760696 NCBI chr 1:65,832,851...65,860,676
Ensembl chr 1:65,832,855...65,859,384
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit IEP RGD PMID:18400403 RGD:2298784 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G Rgs4 regulator of G-protein signaling 4 IEP RGD PMID:22056472 PMID:12653973 RGD:13524518, RGD:13524581 NCBI chr13:81,936,775...81,943,103
Ensembl chr13:81,936,775...81,943,068
JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in ISO MGI:2655190 (MGI:5907783|PMID:28049029) RGD PMID:28049029 MGI:5907783 NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402
JBrowse link
G Srr serine racemase IEP RGD PMID:18603832 RGD:2302212 NCBI chr10:59,769,563...59,786,688
Ensembl chr10:59,769,571...59,787,011
JBrowse link
G Tac1 tachykinin, precursor 1 IEP RGD PMID:17950674 RGD:2304334 NCBI chr 4:35,679,183...35,687,180
Ensembl chr 4:35,679,704...35,687,178
JBrowse link
G Tac3 tachykinin precursor 3 IEP RGD PMID:7536308 RGD:2305965 NCBI chr 7:63,562,552...63,569,170
Ensembl chr 7:63,562,552...63,569,170
JBrowse link
G Tacr1 tachykinin receptor 1 IEP RGD PMID:17950674 RGD:2304334 NCBI chr 4:114,920,844...115,089,733
Ensembl chr 4:114,920,844...115,089,733
JBrowse link
G Tacr3 tachykinin receptor 3 IEP RGD PMID:7536308 RGD:2305965 NCBI chr 2:223,266,536...223,363,791
Ensembl chr 2:223,266,536...223,363,791
JBrowse link
G Tlr4 toll-like receptor 4 IEP RGD PMID:18599265 RGD:7777128 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19541
    response to stimulus 10453
      response to chemical 6220
        response to nitrogen compound 1581
          response to organonitrogen compound 1484
            response to alkaloid 189
              cellular response to alkaloid + 52
              response to caffeine + 33
              response to camptothecin + 6
              response to cocaine + 84
              response to isoquinoline alkaloid + 61
              response to staurosporine + 5
              response to tropane + 0
paths to the root