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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of carbohydrate biosynthetic process
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Accession:GO:0043255 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of carbohydrates.
Synonyms:exact_synonym: regulation of carbohydrate anabolism;   regulation of carbohydrate biosynthesis;   regulation of carbohydrate formation;   regulation of carbohydrate synthesis


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negative regulation of gluconeogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing ISS
ISO
GO_REF:0000024
(MGI:3055866|PMID:11479628)
UniProt
RGD
PMID:11479628 GO_REF:0000024, MGI:3055866 NCBI chr11:81,330,845...81,344,488
Ensembl chr11:81,330,293...81,344,488
JBrowse link
G C1qtnf12 C1q and TNF related 12 IBA
ISO
PMID:21873635
(MGI:5317500|PMID:22275362)
RGD PMID:22275362, PMID:21873635 MGI:5317500, RGD:13792537 NCBI chr 5:173,390,901...173,395,276
Ensembl chr 5:173,390,901...173,395,276
JBrowse link
G C1qtnf3 C1q and TNF related 3 ISO (PMID:20952387)
(MGI:4868567|PMID:20952387)
RGD PMID:20952387 MGI:4868567 NCBI chr 2:60,920,160...60,942,586
Ensembl chr 2:60,920,257...60,942,500
JBrowse link
G Clk2 CDC-like kinase 2 ISO (MGI:4429735|PMID:20074525) RGD PMID:20074525 MGI:4429735 NCBI chr 2:188,476,789...188,488,809
Ensembl chr 2:188,476,820...188,496,191
JBrowse link
G Cry1 cryptochrome circadian regulator 1 ISS
ISO
GO_REF:0000024
(MGI:5914352|PMID:28790135), (MGI:6208175|PMID:29937374)
UniProt
RGD
PMID:28790135, PMID:29937374 GO_REF:0000024, MGI:5914352, MGI:6208175 NCBI chr 7:24,534,593...24,634,098
Ensembl chr 7:24,534,615...24,634,097
JBrowse link
G Ep300 E1A binding protein p300 ISO (PMID:30193097) RGD PMID:30193097 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Erfe erythroferrone IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:98,505,136...98,513,005
Ensembl chr 9:98,505,259...98,511,160
JBrowse link
G Fam3a FAM3 metabolism regulating signaling molecule A IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:156,319,687...156,328,974
Ensembl chr  X:156,319,687...156,328,309
JBrowse link
G Fam3c FAM3 metabolism regulating signaling molecule C IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:49,388,962...49,439,892
Ensembl chr 4:49,387,989...49,439,867
JBrowse link
G Gck glucokinase IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:8878425)
Ensembl
UniProt
RGD
PMID:8878425 GO_REF:0000024, GO_REF:0000107 NCBI chr14:86,149,146...86,191,589
Ensembl chr14:86,148,928...86,190,659
JBrowse link
G Il6 interleukin 6 IDA In liver RGD PMID:16308834 RGD:2306940 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Ins2 insulin 2 ISO (PMID:8069456) RGD PMID:8069456 NCBI chr 1:215,856,967...215,858,034
Ensembl chr 1:215,856,971...215,858,034
JBrowse link
G Lepr leptin receptor ISO MGI:1856009 (MGI:5529403|PMID:24051374) RGD PMID:24051374 MGI:5529403 NCBI chr 5:120,503,475...120,682,281
Ensembl chr 5:120,564,645...120,682,221
JBrowse link
G LOC259246 alpha-2u globulin PGCL1 ISS GO_REF:0000024 UniProt GO_REF:0000024 Ensembl chr 5:77,338,853...77,342,299
Ensembl chr 5:77,338,853...77,342,299
JBrowse link
G Maea macrophage erythroblast attacher, E3 ubiquitin ligase IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:82,664,248...82,697,673
Ensembl chr14:82,664,249...82,697,673
JBrowse link
G Mst1 macrophage stimulating 1 ISO (PMID:19720831) RGD PMID:19720831 NCBI chr 8:116,857,716...116,862,286
Ensembl chr 8:116,857,684...116,862,423
JBrowse link
G Pgp phosphoglycolate phosphatase IMP
ISO
PMID:26755581
(PMID:26755581)
RGD PMID:26755581, PMID:26755581 RGD:10679995 NCBI chr10:13,836,105...13,838,731
Ensembl chr10:13,836,128...13,838,765
JBrowse link
G Serpina12 serpin family A member 12 IEA
ISO
GO_REF:0000107
(MGI:5563627|PMID:22837305)
Ensembl
RGD
PMID:22837305 GO_REF:0000107, MGI:5563627 NCBI chr 6:127,696,501...127,711,238
Ensembl chr 6:127,696,252...127,711,212
JBrowse link
G Sik1 salt-inducible kinase 1 ISS
ISO
GO_REF:0000024
(MGI:3606826|PMID:16148943)
UniProt
RGD
PMID:16148943 GO_REF:0000024, MGI:3606826 NCBI chr20:10,670,747...10,680,279
Ensembl chr20:10,668,411...10,680,283
JBrowse link
G Soga1 suppressor of glucose, autophagy associated 1 ISO (MGI:4837302|PMID:20813965) RGD PMID:20813965 MGI:4837302 NCBI chr 3:153,130,268...153,188,909
Ensembl chr 3:153,125,620...153,188,915
JBrowse link
negative regulation of glycogen biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO
IEA
(PMID:11289049)
GO_REF:0000107
RGD
Ensembl
PMID:11289049 GO_REF:0000107 NCBI chr 1:21,748,201...21,813,205
Ensembl chr 1:21,748,261...21,813,371
JBrowse link
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 IMP RGD PMID:8349040 RGD:1625425 NCBI chr 4:118,852,046...118,901,583
Ensembl chr 4:118,852,062...118,901,591
JBrowse link
G Grb10 growth factor receptor bound protein 10 IDA PMID:11223174 BHF-UCL PMID:11223174 RGD:8553640 NCBI chr14:92,021,851...92,122,249
Ensembl chr14:92,021,851...92,117,923
JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K ISO
IBA
(PMID:12556481)
(MGI:5294535|PMID:19250614)
PMID:21873635
RGD PMID:12556481, PMID:19250614, PMID:21873635 MGI:5294535, RGD:13792537 NCBI chr10:63,775,639...63,796,879
Ensembl chr10:63,776,378...63,795,899
JBrowse link
G Insr insulin receptor IEP RGD PMID:26300412 RGD:11529553 NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414
JBrowse link
G Pask PAS domain containing serine/threonine kinase ISO
IBA
(PMID:16275910)
PMID:21873635
RGD PMID:16275910, PMID:21873635 RGD:13792537 NCBI chr 9:100,450,595...100,479,719
Ensembl chr 9:100,450,586...100,479,868
JBrowse link
negative regulation of hyaluronan biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 ISO (PMID:23509262), (PMID:24251095) RGD PMID:23509262, PMID:24251095 NCBI chr 1:100,896,582...100,926,443
Ensembl chr 1:100,896,947...100,926,335
JBrowse link
G Cltc clathrin heavy chain ISS
ISO
GO_REF:0000024
(PMID:23509262), (PMID:24251095)
UniProt
RGD
PMID:23509262, PMID:24251095 GO_REF:0000024 NCBI chr10:74,014,560...74,070,578
Ensembl chr10:74,014,562...74,070,266
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 IEA
ISO
GO_REF:0000107
MGI:1856877 (MGI:5320806|PMID:22383528)
Ensembl
RGD
PMID:22383528 GO_REF:0000107, MGI:5320806 NCBI chr19:38,237,963...38,321,572
Ensembl chr19:38,237,965...38,321,528
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO
ISS
(PMID:17324121)
GO_REF:0000024
RGD
UniProt
PMID:17324121 GO_REF:0000024 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
negative regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plek pleckstrin ISO (PMID:7559487), (PMID:7782310) RGD PMID:7559487, PMID:7782310 NCBI chr14:100,151,518...100,184,192
Ensembl chr14:100,151,210...100,217,913
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 IMP RGD PMID:7535379 RGD:7777104 NCBI chr 1:248,982,039...250,300,952 JBrowse link
positive regulation of gluconeogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arpp19 cAMP-regulated phosphoprotein 19 ISO (PMID:9653196) RGD PMID:9653196 NCBI chr 8:81,949,577...81,972,054
Ensembl chr 8:81,949,877...81,968,589
JBrowse link
G Ddb1 damage-specific DNA binding protein 1 ISS
ISO
IEA
GO_REF:0000024
(MGI:5914352|PMID:28790135)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:28790135 GO_REF:0000024, GO_REF:0000107, MGI:5914352 NCBI chr 1:226,657,561...226,683,356
Ensembl chr 1:226,657,561...226,683,347
JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 IMP RGD PMID:17526931 RGD:10400884 NCBI chr 1:164,113,459...164,143,818
Ensembl chr 1:164,113,459...164,143,818
JBrowse link
G Foxo1 forkhead box O1 ISO (MGI:4454855|PMID:12783775) RGD PMID:12783775 MGI:4454855 NCBI chr 2:141,451,234...141,527,016
Ensembl chr 2:141,451,234...141,527,016
JBrowse link
G Gcg glucagon IEA
ISO
GO_REF:0000107
(MGI:5529403|PMID:24051374)
Ensembl
RGD
PMID:24051374 GO_REF:0000107, MGI:5529403 NCBI chr 3:48,442,635...48,451,650
Ensembl chr 3:48,442,635...48,451,650
JBrowse link
G Gpt glutamic--pyruvic transaminase IDA RGD PMID:25865565 RGD:11342811 NCBI chr 7:117,759,083...117,761,932
Ensembl chr 7:117,759,083...117,761,931
JBrowse link
G Gpt2 glutamic--pyruvic transaminase 2 IDA RGD PMID:25865565 RGD:11342811 NCBI chr19:22,599,003...22,633,529
Ensembl chr19:22,590,881...22,632,071
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IMP RGD PMID:24177414 RGD:10445837 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IMP RGD PMID:16893891, PMID:24177414 RGD:1624992, RGD:10445837 NCBI chr 3:159,902,441...159,965,003
Ensembl chr 3:159,902,441...159,965,003
JBrowse link
G Kat2a lysine acetyltransferase 2A ISO MGI:95674 (MGI:5529403|PMID:24051374) RGD PMID:24051374 MGI:5529403 NCBI chr10:88,611,586...88,619,558
Ensembl chr10:88,611,586...88,619,537
JBrowse link
G Kat2b lysine acetyltransferase 2B ISO MGI:2155884|MGI:95674 (MGI:5529403|PMID:24051374) RGD PMID:24051374 MGI:5529403 NCBI chr 9:4,440,982...4,492,949 JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO MGI:1857774 (MGI:3046612|PMID:15232616) RGD PMID:15232616 MGI:3046612 NCBI chr 7:126,618,872...126,687,282
Ensembl chr 7:126,619,196...126,681,752
JBrowse link
G Ppp4r3a protein phosphatase 4, regulatory subunit 3A ISO (MGI:4837269|PMID:20876121) RGD PMID:20876121 MGI:4837269 NCBI chr 6:125,040,803...125,083,496
Ensembl chr 6:125,040,803...125,060,482
JBrowse link
G Ppp4r3b protein phosphatase 4, regulatory subunit 3B ISO (MGI:4837269|PMID:20876121) RGD PMID:20876121 MGI:4837269 NCBI chr14:113,570,150...113,618,138
Ensembl chr14:113,570,150...113,618,138
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 NAS PMID:11903059 UniProt PMID:11903059 RGD:8554594 NCBI chr 2:54,857,688...54,893,404
Ensembl chr 2:54,857,688...54,893,404
JBrowse link
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 ISS
ISO
GO_REF:0000024
(MGI:4941441|PMID:20484139)
UniProt
RGD
PMID:20484139 GO_REF:0000024, MGI:4941441 NCBI chr18:63,415,298...63,489,240
Ensembl chr18:63,415,306...63,488,027
JBrowse link
G Sirt1 sirtuin 1 IMP
IEA
ISO
GO_REF:0000107
(PMID:30193097)
Ensembl
RGD
PMID:30193097, PMID:21212096 GO_REF:0000107, RGD:9585757 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
G Stk11 serine/threonine kinase 11 IMP RGD PMID:17083919 RGD:2291956 NCBI chr 7:12,440,751...12,457,513
Ensembl chr 7:12,440,751...12,457,513
JBrowse link
G Supt20h SPT20 homolog, SAGA complex component ISO MGI:95674 (MGI:5529403|PMID:24051374) RGD PMID:24051374 MGI:5529403 NCBI chr 2:143,892,609...143,925,733
Ensembl chr 2:143,892,567...143,925,633
JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO MGI:5430317 (MGI:5468191|PMID:23260145) RGD PMID:23260145 MGI:5468191 NCBI chr 1:276,686,911...276,730,517
Ensembl chr 1:276,659,542...276,730,514
Ensembl chr 1:276,659,542...276,730,514
JBrowse link
G Wdr5 WD repeat domain 5 ISO MGI:1343094|MGI:95674 (MGI:5529403|PMID:24051374) RGD PMID:24051374 MGI:5529403 NCBI chr 3:6,061,892...6,080,724
Ensembl chr 3:6,061,940...6,080,680
JBrowse link
positive regulation of glycogen biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO (PMID:16814735) RGD PMID:16814735 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Akt2 AKT serine/threonine kinase 2 ISO
IEA
(PMID:16814735)
GO_REF:0000107
RGD
Ensembl
PMID:16814735 GO_REF:0000107 NCBI chr 1:84,400,939...84,451,223
Ensembl chr 1:84,411,726...84,450,162
JBrowse link
G C1qtnf2 C1q and TNF related 2 ISO (MGI:3055459|PMID:15231994) RGD PMID:15231994 MGI:3055459 NCBI chr10:29,067,102...29,084,035
Ensembl chr10:29,067,102...29,084,035
JBrowse link
G Cd36 CD36 molecule IDA RGD PMID:14640889 RGD:1600636 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Dyrk2 dual specificity tyrosine phosphorylation regulated kinase 2 ISO (PMID:11311121) RGD PMID:11311121 NCBI chr 7:61,785,423...61,816,775
Ensembl chr 7:61,786,309...61,798,729
JBrowse link
G Epm2aip1 EPM2A interacting protein 1 IBA
ISO
PMID:21873635
MGI:3857785 (MGI:5543825|PMID:24142699)
RGD PMID:24142699, PMID:21873635 MGI:5543825, RGD:13792537 NCBI chr 8:119,524,039...119,531,387
Ensembl chr 8:119,524,039...119,531,387
JBrowse link
G Esrrb estrogen-related receptor beta IDA
ISO
PMID:24481529
(MGI:5905261|PMID:24481529)
RGD PMID:24481529, PMID:24481529 MGI:5905261, RGD:12910990 NCBI chr 6:110,360,940...110,458,406
Ensembl chr 6:110,410,141...110,455,906
JBrowse link
G Gck glucokinase IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:8878425)
Ensembl
UniProt
RGD
PMID:8878425 GO_REF:0000024, GO_REF:0000107 NCBI chr14:86,149,146...86,191,589
Ensembl chr14:86,148,928...86,190,659
JBrowse link
G Igf1 insulin-like growth factor 1 ISO
IEA
ISS
(PMID:21076856)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21076856 GO_REF:0000024, GO_REF:0000107 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Igf2 insulin-like growth factor 2 IEA
ISO
GO_REF:0000107
(MGI:4438697|PMID:20032056)
Ensembl
RGD
PMID:20032056 GO_REF:0000107, MGI:4438697 NCBI chr 1:215,828,102...215,839,081
Ensembl chr 1:215,828,102...215,846,911
JBrowse link
G Ins2 insulin 2 ISO (PMID:17925406) RGD PMID:17925406 NCBI chr 1:215,856,967...215,858,034
Ensembl chr 1:215,856,971...215,858,034
JBrowse link
G Insr insulin receptor ISO
IEA
(PMID:17925406)
(MGI:4438697|PMID:20032056)
GO_REF:0000107
RGD
Ensembl
PMID:17925406, PMID:20032056 GO_REF:0000107, MGI:4438697 NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414
JBrowse link
G Irs1 insulin receptor substrate 1 ISO
IEA
(PMID:16814735)
GO_REF:0000107
RGD
Ensembl
PMID:16814735 GO_REF:0000107 NCBI chr 9:88,033,668...88,086,488
Ensembl chr 9:88,033,668...88,086,488
JBrowse link
G Irs2 insulin receptor substrate 2 ISO (PMID:16814735) RGD PMID:16814735 NCBI chr16:83,824,515...83,848,569
Ensembl chr16:83,824,430...83,848,684
JBrowse link
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E IMP PMID:15752363 UniProt PMID:15752363 RGD:2306166 NCBI chr15:33,535,986...33,537,146
Ensembl chr15:33,535,986...33,537,146
JBrowse link
G Ppp1r3g protein phosphatase 1, regulatory subunit 3G ISO (MGI:5000151|PMID:21471512) RGD PMID:21471512 MGI:5000151 NCBI chr17:29,566,032...29,570,294
Ensembl chr17:29,567,404...29,568,447
JBrowse link
G Pth parathyroid hormone ISO
ISS
(PMID:21076856)
GO_REF:0000024
RGD
UniProt
PMID:21076856 GO_REF:0000024 NCBI chr 1:178,215,829...178,218,761
Ensembl chr 1:178,215,829...178,218,761
JBrowse link
G Sorbs1 sorbin and SH3 domain containing 1 ISO (MGI:3690172|PMID:11001060) RGD PMID:11001060 MGI:3690172 NCBI chr 1:259,373,921...259,502,108
Ensembl chr 1:259,376,933...259,484,569
JBrowse link
positive regulation of hyaluronan biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egf epidermal growth factor ISO (PMID:17324121) RGD PMID:17324121 NCBI chr 2:68,820,616...68,895,537 JBrowse link
G Has2 hyaluronan synthase 2 IDA
IMP
RGD PMID:12186949, PMID:17080198 RGD:9588629, RGD:9588632 NCBI chr 7:96,438,046...96,464,049
Ensembl chr 7:96,438,046...96,464,049
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 IEA
ISO
GO_REF:0000107
(PMID:17324121)
Ensembl
RGD
PMID:17324121 GO_REF:0000107 NCBI chr 2:240,773,520...240,890,053
Ensembl chr 2:240,773,456...240,866,689
JBrowse link
G Pdgfb platelet derived growth factor subunit B IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:17324121)
Ensembl
UniProt
RGD
PMID:17324121 GO_REF:0000024, GO_REF:0000107 NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:17080198 RGD:9588632 NCBI chr 2:54,951,625...54,966,470
Ensembl chr 2:54,952,821...54,963,448
JBrowse link
positive regulation of inositol phosphate biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1r1 ADCYAP receptor type I IDA RGD PMID:8943280 RGD:2315982 NCBI chr 4:85,662,809...85,711,696
Ensembl chr 4:85,662,892...85,711,696
JBrowse link
G Avpr1b arginine vasopressin receptor 1B ISO (PMID:9322919) RGD PMID:9322919 NCBI chr13:48,367,307...48,378,831
Ensembl chr13:48,367,307...48,378,831
JBrowse link
G Cd244 CD244 molecule ISO (PMID:8376943) RGD PMID:8376943 NCBI chr13:89,959,091...89,995,993
Ensembl chr13:89,975,267...89,995,974
JBrowse link
G Mas1 MAS1 proto-oncogene, G protein-coupled receptor IDA RGD PMID:1332507 RGD:2316794 NCBI chr 1:48,076,761...48,108,218
Ensembl chr 1:48,077,033...48,108,216
JBrowse link
G Ntsr1 neurotensin receptor 1 IMP RGD PMID:11861328 RGD:9743897 NCBI chr 3:175,982,313...176,046,345
Ensembl chr 3:175,885,894...176,046,345
JBrowse link
G Ptafr platelet-activating factor receptor IDA RGD PMID:8798508 RGD:9999203 NCBI chr 5:150,746,284...150,775,675
Ensembl chr 5:150,754,021...150,775,672
JBrowse link
G Pth parathyroid hormone ISO (PMID:11604398) RGD PMID:11604398 NCBI chr 1:178,215,829...178,218,761
Ensembl chr 1:178,215,829...178,218,761
JBrowse link
G Pth1r parathyroid hormone 1 receptor IDA PMID:19608645 BHF-UCL PMID:19608645 RGD:8553376 NCBI chr 8:118,984,531...119,012,803
Ensembl chr 8:118,988,053...119,012,671
JBrowse link
G Snca synuclein alpha ISO (PMID:15641770) RGD PMID:15641770 NCBI chr 4:90,782,412...90,883,236
Ensembl chr 4:90,782,374...90,882,285
JBrowse link
positive regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:15705806)
Ensembl
UniProt
RGD
PMID:15705806 GO_REF:0000024, GO_REF:0000107 NCBI chr12:17,309,122...17,315,267
Ensembl chr12:17,309,834...17,311,112
JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor IEA
ISO
GO_REF:0000107
(MGI:5318037|PMID:10493819)
Ensembl
RGD
PMID:10493819 GO_REF:0000107, MGI:5318037 NCBI chr 6:12,493,182...12,554,482
Ensembl chr 6:12,493,943...12,554,439
JBrowse link
G Myh9 myosin, heavy chain 9 IMP RGD PMID:20068007 RGD:6902910 NCBI chr 7:118,740,005...118,792,507
Ensembl chr 7:118,741,110...118,792,625
JBrowse link
G P2ry1 purinergic receptor P2Y1 IDA PMID:11390975 BHF-UCL PMID:11390975 RGD:8553380 NCBI chr 2:151,314,818...151,320,312
Ensembl chr 2:151,314,818...151,320,319
JBrowse link
G P2ry6 pyrimidinergic receptor P2Y6 ISO (PMID:8670200) RGD PMID:8670200 NCBI chr 1:165,972,439...166,008,348
Ensembl chr 1:165,972,440...165,997,751
JBrowse link
G Plcd1 phospholipase C, delta 1 IMP RGD PMID:16709602 RGD:2300424 NCBI chr 8:127,753,514...127,782,070
Ensembl chr 8:127,753,539...127,782,070
JBrowse link
G Pou1f1 POU class 1 homeobox 1 ISO MGI:1856024|MGI:1856025 (MGI:2135699|PMID:11371619) RGD PMID:11371619 MGI:2135699 NCBI chr11:2,645,659...2,662,581
Ensembl chr11:2,645,865...2,662,579
JBrowse link
regulation of gluconeogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadm acyl-CoA dehydrogenase medium chain IEA
ISO
GO_REF:0000107
(MGI:4412440|PMID:18459129)
Ensembl
RGD
PMID:18459129 GO_REF:0000107, MGI:4412440 NCBI chr 2:260,124,418...260,148,589
Ensembl chr 2:260,124,418...260,148,589
JBrowse link
G Dgkq diacylglycerol kinase, theta ISO (PMID:23767959) RGD PMID:23767959 NCBI chr14:2,069,409...2,083,370
Ensembl chr14:2,069,409...2,083,370
JBrowse link
G Fbp1 fructose-bisphosphatase 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:7558035)
Ensembl
UniProt
RGD
PMID:7558035 GO_REF:0000024, GO_REF:0000107 NCBI chr17:396,175...417,480
Ensembl chr17:396,180...417,480
JBrowse link
G Foxo1 forkhead box O1 ISO (MGI:3801555|PMID:18497885) RGD PMID:18497885 MGI:3801555 NCBI chr 2:141,451,234...141,527,016
Ensembl chr 2:141,451,234...141,527,016
JBrowse link
G Gnmt glycine N-methyltransferase IBA
ISO
PMID:21873635
MGI:3842652 (MGI:3842675|PMID:17937387)
RGD PMID:17937387, PMID:21873635 MGI:3842675, RGD:13792537 NCBI chr 9:16,565,274...16,568,626
Ensembl chr 9:16,565,225...16,568,627
JBrowse link
G Insr insulin receptor IEP RGD PMID:29896241 RGD:14700925 NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414
JBrowse link
G Lep leptin ISO MGI:1856424 (MGI:3769319|PMID:16513828) RGD PMID:16513828 MGI:3769319 NCBI chr 4:56,337,695...56,351,818
Ensembl chr 4:56,337,695...56,351,818
JBrowse link
G LOC100911564 glycine N-methyltransferase-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:16,314,136...16,317,575
Ensembl chr 9:16,314,173...16,317,413
JBrowse link
G Nln neurolysin IEA
ISO
GO_REF:0000107
MGI:4125183 (MGI:5588077|PMID:24719317)
Ensembl
RGD
PMID:24719317 GO_REF:0000107, MGI:5588077 NCBI chr 2:34,086,970...34,185,835
Ensembl chr 2:34,087,880...34,185,812
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 ISO MGI:1857745 (MGI:74913|PMID:7628695) RGD PMID:7628695 MGI:74913 NCBI chr18:31,728,373...32,704,022
Ensembl chr18:31,728,373...31,749,647
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ISS
ISO
IEA
GO_REF:0000024
(MGI:5495336|PMID:23395176)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23395176 GO_REF:0000024, GO_REF:0000107, MGI:5495336 NCBI chr  X:71,540,870...71,585,906
Ensembl chr  X:71,528,988...71,585,908
JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 IEA
ISO
ISS
GO_REF:0000107
(MGI:5428826|PMID:22360721)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22360721 GO_REF:0000024, GO_REF:0000107, MGI:5428826 NCBI chr10:82,838,270...82,852,758
Ensembl chr10:82,839,153...82,852,660
JBrowse link
G Ranbp2 RAN binding protein 2 ISO MGI:3693886 (MGI:3693040|PMID:17069463) RGD PMID:17069463 MGI:3693040 NCBI chr20:28,027,054...28,076,664
NCBI chr20:28,365,538...28,375,676
Ensembl chr20:28,027,054...28,076,664
Ensembl chr20:28,027,054...28,076,664
JBrowse link
G Sesn2 sestrin 2 ISO MGI:3587950 (MGI:5444071|PMID:22958918) RGD PMID:22958918 MGI:5444071 NCBI chr 5:150,684,891...150,703,846
Ensembl chr 5:150,684,133...150,704,117
JBrowse link
G Sirt7 sirtuin 7 ISS
ISO
GO_REF:0000024
(PMID:28655758)
UniProt
RGD
PMID:28655758 GO_REF:0000024 NCBI chr10:109,796,046...109,802,821
Ensembl chr10:109,796,020...109,802,739
JBrowse link
G Slc35b4 solute carrier family 35 member B4 ISO (MGI:5142157|PMID:21507882) RGD PMID:21507882 MGI:5142157 NCBI chr 4:61,550,995...61,573,003
Ensembl chr 4:61,550,995...61,573,003
JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO MGI:4431951 (MGI:5448876|PMID:23028378) RGD PMID:23028378 MGI:5448876 NCBI chr 1:276,686,911...276,730,517
Ensembl chr 1:276,659,542...276,730,514
Ensembl chr 1:276,659,542...276,730,514
JBrowse link
G Usp7 ubiquitin specific peptidase 7 ISS
ISO
IEA
GO_REF:0000024
(PMID:28655758)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:28655758 GO_REF:0000024, GO_REF:0000107 NCBI chr10:6,930,462...7,019,910
Ensembl chr10:6,975,244...7,018,930
JBrowse link
regulation of glycogen biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO (PMID:8940145) RGD PMID:8940145 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K ISO (MGI:5294535|PMID:19250614) RGD PMID:19250614 MGI:5294535 NCBI chr10:63,775,639...63,796,879
Ensembl chr10:63,776,378...63,795,899
JBrowse link
G Mtor mechanistic target of rapamycin kinase IDA
IMP
RGD PMID:17142137, PMID:17142137 RGD:1625611, RGD:1625611 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha IDA RGD PMID:7720853 RGD:2304267 NCBI chr 1:219,439,953...219,443,570
Ensembl chr 1:219,439,953...219,443,570
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta IDA RGD PMID:7720853 RGD:2304267 NCBI chr 6:23,548,507...23,581,136
Ensembl chr 6:23,549,317...23,581,052
JBrowse link
G Ppp1r3a protein phosphatase 1, regulatory subunit 3A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:41,171,486...41,212,116
Ensembl chr 4:41,171,486...41,212,072
JBrowse link
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:7720853, PMID:21873635, PMID:11716774 RGD:2304267, RGD:13792537, RGD:2306167 NCBI chr16:60,415,192...60,427,498
Ensembl chr16:60,415,229...60,427,474
JBrowse link
G Ppp1r3c protein phosphatase 1, regulatory subunit 3C IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11716774, PMID:21873635 RGD:2306167, RGD:13792537 NCBI chr 1:255,371,830...255,376,833
Ensembl chr 1:255,371,810...255,376,833
JBrowse link
G Ppp1r3d protein phosphatase 1, regulatory subunit 3D IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11716774, PMID:21873635 RGD:2306167, RGD:13792537 NCBI chr 3:173,950,613...173,953,684
Ensembl chr 3:173,950,613...173,953,684
JBrowse link
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:15752363, PMID:21873635 RGD:2306166, RGD:13792537 NCBI chr15:33,535,986...33,537,146
Ensembl chr15:33,535,986...33,537,146
JBrowse link
G Ppp1r3f protein phosphatase 1, regulatory subunit 3F ISO (PMID:21668450) RGD PMID:21668450 NCBI chr  X:15,774,091...15,784,711 JBrowse link
G Ppp1r3g protein phosphatase 1, regulatory subunit 3G IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:29,566,032...29,570,294
Ensembl chr17:29,567,404...29,568,447
JBrowse link
regulation of hyaluronan biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smpd3 sphingomyelin phosphodiesterase 3 ISO MGI:1856877 (MGI:5320806|PMID:22383528) RGD PMID:22383528 MGI:5320806 NCBI chr19:38,237,963...38,321,572
Ensembl chr19:38,237,965...38,321,528
JBrowse link
regulation of inositol trisphosphate biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptk2b protein tyrosine kinase 2 beta ISS
ISO
GO_REF:0000024
(MGI:3583523|PMID:12960403)
UniProt
RGD
PMID:12960403 GO_REF:0000024, MGI:3583523 NCBI chr15:42,827,306...42,947,796
Ensembl chr15:42,827,310...42,947,656
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    metabolic process 12263
      biosynthetic process 6222
        regulation of biosynthetic process 4109
          regulation of carbohydrate biosynthetic process 112
            regulation of L-ascorbic acid biosynthetic process + 0
            regulation of gluconeogenesis + 57
            regulation of glucosinolate biosynthetic process 0
            regulation of inositol biosynthetic process + 0
            regulation of inositol phosphate biosynthetic process + 19
            regulation of lactose biosynthetic process + 0
            regulation of photosynthesis, dark reaction + 0
            regulation of polysaccharide biosynthetic process + 40
            regulation of raffinose biosynthetic process + 0
Path 2
Term Annotations click to browse term
  biological_process 20020
    biological regulation 13769
      regulation of biological process 13071
        regulation of metabolic process 6993
          regulation of primary metabolic process 6016
            regulation of carbohydrate metabolic process 203
              regulation of carbohydrate biosynthetic process 112
                regulation of L-ascorbic acid biosynthetic process + 0
                regulation of gluconeogenesis + 57
                regulation of glucosinolate biosynthetic process 0
                regulation of inositol biosynthetic process + 0
                regulation of inositol phosphate biosynthetic process + 19
                regulation of lactose biosynthetic process + 0
                regulation of photosynthesis, dark reaction + 0
                regulation of polysaccharide biosynthetic process + 40
                regulation of raffinose biosynthetic process + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.