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ONTOLOGY REPORT - ANNOTATIONS


Term:Fanconi anaemia nuclear complex
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Accession:GO:0043240 term browser browse the term
Definition:A protein complex composed of the Fanconi anaemia (FA) proteins including A, C, E, G and F (FANCA-F). Functions in the activation of the downstream protein FANCD2 by monoubiquitylation, and is essential for protection against chromosome breakage.
Synonyms:exact_synonym: FA complex;   FA core complex;   FA nuclear complex;   Fanconi anaemia complex


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Fanconi anaemia nuclear complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07030926.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:109,891,383...109,891,879 JBrowse link
G Cenps centromere protein S ISO (PMID:20347428), (PMID:20347429) RGD PMID:20347428, PMID:20347429 NCBI chr 5:165,946,106...165,955,723 JBrowse link
G Cenpx centromere protein X ISO (PMID:20347428), (PMID:20347429) RGD PMID:20347428, PMID:20347429 NCBI chr10:109,890,904...109,893,804 JBrowse link
G Cort cortistatin NOT IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:165,942,780...165,944,221 JBrowse link
G Faap100 FA core complex associated protein 100 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:109,539,381...109,552,434
Ensembl chr10:109,539,548...109,551,362
JBrowse link
G Faap20 FA core complex associated protein 20 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:22266823), (PMID:22343915), (PMID:22396592), (PMID:22705371)
UniProt
RGD
PMID:22266823, PMID:22343915, PMID:22396592, PMID:22705371, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:172,648,171...172,655,576
Ensembl chr 5:172,648,950...172,655,576
JBrowse link
G Faap24 FA core complex associated protein 24 ISO
IBA
(PMID:20347428), (PMID:20347429)
PMID:21873635
RGD PMID:20347428, PMID:20347429, PMID:21873635 RGD:13792537 NCBI chr 1:91,657,263...91,663,485
Ensembl chr 1:91,657,263...91,663,467
JBrowse link
G Fanca FA complementation group A ISO
IBA
(PMID:20347428), (PMID:22266823), (PMID:22343915), (PMID:22705371)
PMID:21873635
RGD PMID:20347428, PMID:22266823, PMID:22343915, PMID:22705371, PMID:21873635 RGD:13792537 NCBI chr19:56,067,548...56,126,075
Ensembl chr19:56,067,548...56,126,063
JBrowse link
G Fancb FA complementation group B ISO
IBA
(PMID:20347428)
PMID:21873635
RGD PMID:20347428, PMID:21873635 RGD:13792537 NCBI chr  X:31,124,018...31,140,790
Ensembl chr  X:31,124,018...31,140,711
JBrowse link
G Fancc FA complementation group C ISS
IBA
ISO
IEA
GO_REF:0000024
PMID:21873635
(PMID:20347428), (PMID:22266823)
GO_REF:0000104
UniProt
RGD
PMID:20347428, PMID:22266823, PMID:21873635 GO_REF:0000024, GO_REF:0000104, RGD:13792537 NCBI chr17:826,512...955,703
Ensembl chr17:833,509...955,615
JBrowse link
G Fance FA complementation group E ISO
IBA
(PMID:20347428), (PMID:22266823)
PMID:21873635
RGD PMID:20347428, PMID:22266823, PMID:21873635 RGD:13792537 NCBI chr20:7,888,927...7,906,142
Ensembl chr20:7,895,083...7,906,142
JBrowse link
G Fancf FA complementation group F ISO
IBA
(MGI:MGI:5305003|PMID:21915857)
PMID:21873635
(PMID:20347428)
RGD PMID:20347428, PMID:21915857, PMID:21873635 MGI:MGI:5305003, RGD:13792537 NCBI chr 1:107,229,516...107,232,321
Ensembl chr 1:107,231,292...107,232,305
JBrowse link
G Fancg FA complementation group G ISO
IBA
(PMID:20347428), (PMID:22266823), (PMID:22343915), (PMID:22705371)
PMID:21873635
RGD PMID:20347428, PMID:22266823, PMID:22343915, PMID:22705371, PMID:21873635 RGD:13792537 NCBI chr 5:58,448,060...58,456,416
Ensembl chr 5:58,448,822...58,455,819
JBrowse link
G Fancl FA complementation group L ISO (PMID:20347428), (PMID:22343915) RGD PMID:20347428, PMID:22343915 NCBI chr14:110,675,306...110,740,880
Ensembl chr14:110,676,090...110,740,317
JBrowse link
G Fancm FA complementation group M ISO (PMID:20347428), (PMID:20347429) RGD PMID:20347428, PMID:20347429 NCBI chr 6:86,823,195...86,877,067
Ensembl chr 6:86,823,684...86,876,633
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20609
    protein-containing complex 6092
      Fanconi anaemia nuclear complex 15
Path 2
Term Annotations click to browse term
  cellular_component 20609
    cellular anatomical entity 20358
      organelle 13257
        membrane-bounded organelle 11448
          intracellular membrane-bounded organelle 10704
            nucleus 7183
              nuclear lumen 4262
                nucleoplasm 3399
                  Fanconi anaemia nuclear complex 15
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.