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ONTOLOGY REPORT - ANNOTATIONS


Term:compact myelin
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Accession:GO:0043218 term browser browse the term
Definition:The portion of the myelin sheath in which layers of cell membrane are tightly juxtaposed, completely excluding cytoplasm. The juxtaposed cytoplasmic surfaces form the major dense line, while the juxtaposed extracellular surfaces form the interperiod line visible in electron micrographs.
Synonyms:narrow_synonym: Schwann cell compact myelin;   oligodendrocyte compact myelin
 xref: NIF_Subcellular:sao1123256993


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compact myelin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd59 CD59 molecule IDA RGD PMID:12153479 RGD:625622 NCBI chr 3:94,010,481...94,028,660
Ensembl chr 3:94,010,475...94,028,621
JBrowse link
G Mag myelin-associated glycoprotein ISO (PMID:6200494) RGD PMID:6200494 NCBI chr 1:89,345,325...89,360,905
Ensembl chr 1:89,345,429...89,360,733
JBrowse link
G Mbp myelin basic protein IDA
IBA
ISO
PMID:21873635
(MGI:3621687|PMID:12718855)
MMO:0000679
RGD PMID:12718855, PMID:2462020, PMID:21873635, PMID:10537049 MGI:3621687, RGD:1358774, RGD:13792537, RGD:633193 NCBI chr18:79,326,738...79,437,310
Ensembl chr18:79,326,738...79,437,310
JBrowse link
G Pllp plasmolipin IDA RGD PMID:12871592 RGD:1358791 NCBI chr19:10,731,855...10,752,641
Ensembl chr19:10,731,855...10,752,641
JBrowse link
G Pmp22 peripheral myelin protein 22 IDA
ISO
(MGI:3698363|PMID:11114256), (MGI:6155489|PMID:29315582) RGD PMID:11114256, PMID:29315582, PMID:1556154 MGI:3698363, MGI:6155489, RGD:1358785 NCBI chr10:49,538,588...49,568,583
Ensembl chr10:49,538,588...49,568,583
JBrowse link
Schmidt-Lanterman incisure term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b1 aldo-keto reductase family 1 member B IDA RGD PMID:1650113 RGD:8548783 NCBI chr 4:61,706,866...61,720,959
Ensembl chr 4:61,706,864...61,720,956
JBrowse link
G Anxa2 annexin A2 ISO (MGI:4441217|PMID:20237282) RGD PMID:20237282 MGI:4441217 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Cdh1 cadherin 1 ISO (MGI:4441217|PMID:20237282) RGD PMID:20237282 MGI:4441217 NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395
JBrowse link
G Cldn5 claudin 5 IDA RGD PMID:12403818 RGD:634852 NCBI chr11:86,356,292...86,357,718
Ensembl chr11:86,356,294...86,357,718
JBrowse link
G Jam3 junctional adhesion molecule 3 ISO (MGI:4946150|PMID:21097846) RGD PMID:21097846 MGI:4946150 NCBI chr 8:28,147,110...28,208,466
Ensembl chr 8:28,147,111...28,208,466
JBrowse link
G Mag myelin-associated glycoprotein IDA
ISO
(MGI:2675529|PMID:12975355) RGD PMID:12975355, PMID:12838505 MGI:2675529, RGD:1600847 NCBI chr 1:89,345,325...89,360,905
Ensembl chr 1:89,345,429...89,360,733
JBrowse link
G Marveld2 MARVEL domain containing 2 ISO (MGI:4946150|PMID:21097846) RGD PMID:21097846 MGI:4946150 NCBI chr 2:30,612,746...30,634,308
Ensembl chr 2:30,612,106...30,634,243
JBrowse link
G Mpdz multiple PDZ domain crumbs cell polarity complex component IEA
ISO
GO_REF:0000107
(MGI:4441217|PMID:20237282)
Ensembl
RGD
PMID:20237282 GO_REF:0000107, MGI:4441217 NCBI chr 5:99,413,184...99,566,356
Ensembl chr 5:99,413,187...99,566,318
JBrowse link
G Mpp5 membrane palmitoylated protein 5 ISO (MGI:4441217|PMID:20237282) RGD PMID:20237282 MGI:4441217 NCBI chr 6:101,923,675...102,029,705
Ensembl chr 6:101,923,785...102,028,592
JBrowse link
G Myoc myocilin IDA RGD PMID:12838505 RGD:1600847 NCBI chr13:80,517,531...80,527,928
Ensembl chr13:80,517,536...80,527,928
JBrowse link
G Ncmap noncompact myelin associated protein IDA
IEA
IBA
PMID:18650334
GO_REF:0000002
PMID:21873635
InterPro PMID:18650334, PMID:21873635 GO_REF:0000002, RGD:8554263, RGD:13792537 NCBI chr 5:153,729,250...153,737,161
Ensembl chr 5:153,729,250...153,737,161
JBrowse link
G Pard3 par-3 family cell polarity regulator ISO (MGI:4441217|PMID:20237282) RGD PMID:20237282 MGI:4441217 NCBI chr19:60,017,746...60,580,628
Ensembl chr19:60,017,746...60,580,651
JBrowse link
G Prkci protein kinase C, iota ISO (MGI:4441217|PMID:20237282) RGD PMID:20237282 MGI:4441217 NCBI chr 2:115,941,998...116,002,550
Ensembl chr 2:115,941,993...116,002,561
JBrowse link
G Pten phosphatase and tensin homolog ISO (MGI:4441217|PMID:20237282) RGD PMID:20237282 MGI:4441217 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Sirt2 sirtuin 2 IDA
ISO
ISS
IEA
PMID:21949390
(MGI:5567913|PMID:16933150)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:16933150, PMID:21949390 GO_REF:0000024, GO_REF:0000107, MGI:5567913, RGD:8655533 NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20615
    cellular anatomical entity 20304
      compact myelin 19
        Schmidt-Lanterman incisure 15
Path 2
Term Annotations click to browse term
  cellular_component 20615
    cellular anatomical entity 20304
      myelin sheath 67
        compact myelin 19
          Schmidt-Lanterman incisure 15
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.