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ONTOLOGY REPORT - ANNOTATIONS


Term:glycosphingolipid binding
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Accession:GO:0043208 term browser browse the term
Definition:Binding to glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide.



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glycosphingolipid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cel carboxyl ester lipase IDA RGD PMID:15296737 RGD:2313559 NCBI chr 3:11,883,532...11,891,035
Ensembl chr 3:11,883,532...11,891,035
JBrowse link
G Il2 interleukin 2 IDA binds gangliosides GM1, GD1a, GD1b and GT1b with increased binding as the carbohydrate side chains increase in complexity RGD PMID:6609839 RGD:1600093 NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566
JBrowse link
G Lama1 laminin subunit alpha 1 enables ISO (MGI:3836888|PMID:19118221) RGD PMID:19118221 MGI:3836888 NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478
JBrowse link
G Lamb1 laminin subunit beta 1 enables ISO (MGI:3836888|PMID:19118221) RGD PMID:19118221 MGI:3836888 NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585
JBrowse link
G Lamc1 laminin subunit gamma 1 enables ISO (MGI:3836888|PMID:19118221) RGD PMID:19118221 MGI:3836888 NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492
JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase IPI RGD PMID:8106508 RGD:2303724 NCBI chr 5:16,639,512...16,755,501
Ensembl chr 5:16,639,466...16,756,868
JBrowse link
ganglioside binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clip3 CAP-GLY domain containing linker protein 3 enables ISO
ISS
(PMID:20052288)
GO_REF:0000024
RGD
UniProt
PMID:20052288 GO_REF:0000024 NCBI chr 1:85,547,170...85,563,187
Ensembl chr 1:85,547,206...85,563,184
JBrowse link
ganglioside GM1 binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epdr1 ependymin related 1 enables ISO (PMID:30729188) RGD PMID:30729188 NCBI chr17:45,333,677...45,358,597
Ensembl chr17:45,333,956...45,358,594
JBrowse link
G Psap prosaposin enables ISO (PMID:1454804) RGD PMID:1454804 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
G Rtn4r reticulon 4 receptor enables ISO
ISS
(PMID:18411262)
GO_REF:0000024
RGD
UniProt
PMID:18411262 GO_REF:0000024 NCBI chr11:82,844,585...82,869,012
Ensembl chr11:82,844,309...82,869,466
JBrowse link
ganglioside GM2 binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psap prosaposin enables ISO (PMID:1454804) RGD PMID:1454804 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
ganglioside GM3 binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psap prosaposin enables ISO (PMID:1454804) RGD PMID:1454804 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
ganglioside GP1c binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psap prosaposin enables ISO (PMID:1454804) RGD PMID:1454804 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
ganglioside GT1b binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mag myelin-associated glycoprotein enables ISS
IDA
ISO
GO_REF:0000024
PMID:8995428
(MGI:5822923|PMID:27922006)
UniProt
RGD
PMID:27922006 PMID:8995428 GO_REF:0000024 MGI:5822923, RGD:12050139 NCBI chr 1:86,148,227...86,163,726
Ensembl chr 1:86,148,228...86,163,656
JBrowse link
G Psap prosaposin enables ISO (PMID:1454804) RGD PMID:1454804 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
G Rtn4r reticulon 4 receptor enables ISS
ISO
GO_REF:0000024
(PMID:18411262)
UniProt
RGD
PMID:18411262 GO_REF:0000024 NCBI chr11:82,844,585...82,869,012
Ensembl chr11:82,844,309...82,869,466
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20780
    binding 17500
      lipid binding 865
        sphingolipid binding 29
          glycosphingolipid binding 11
            ganglioside binding + 5
paths to the root