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ONTOLOGY REPORT - ANNOTATIONS


Term:dendritic shaft
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Accession:GO:0043198 term browser browse the term
Definition:Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines.
Synonyms:related_synonym: trunk
 xref: NIF_Subcellular:sao2034472720


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dendritic shaft term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap5 A-kinase anchoring protein 5 JBrowse link 6 99,356,509 99,361,909 RGD:2313219
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:1624291
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 JBrowse link 2 187,964,100 188,022,847 RGD:1624291
G Arpc2 actin related protein 2/3 complex, subunit 2 JBrowse link 9 81,518,163 81,548,871 RGD:11530067
G Baiap2 BAR/IMD domain containing adaptor protein 2 JBrowse link 10 109,107,326 109,187,458 RGD:11576288
G Cacna1b calcium voltage-gated channel subunit alpha1 B JBrowse link 3 1,740,026 1,924,959 RGD:1580151
G Cacna1c calcium voltage-gated channel subunit alpha1 C JBrowse link 4 150,635,808 151,270,790 RGD:1624291
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit JBrowse link 1 123,897,341 124,039,263 RGD:1600985
G Cnih2 cornichon family AMPA receptor auxiliary protein 2 JBrowse link 1 220,474,485 220,480,723 RGD:8554136
G Cnih3 cornichon family AMPA receptor auxiliary protein 3 JBrowse link 13 99,663,150 99,770,625 RGD:8554136
G Cript CXXC repeat containing interactor of PDZ3 domain JBrowse link 6 10,594,147 10,602,103 RGD:632510
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1299225
G Dbn1 drebrin 1 JBrowse link 17 9,679,511 9,693,878 RGD:10398728
G Dlg3 discs large MAGUK scaffold protein 3 JBrowse link X 70,596,246 70,648,529 RGD:8554028
G Drd1 dopamine receptor D1 JBrowse link 17 11,099,736 11,104,352 RGD:7248764
G Epha4 Eph receptor A4 JBrowse link 9 83,111,222 83,253,486 RGD:12911004
G Exoc4 exocyst complex component 4 JBrowse link 4 60,549,128 61,358,305 RGD:8554028
G Flna filamin A JBrowse link X 156,460,785 156,487,245 RGD:7207403
G Gabbr1 gamma-aminobutyric acid type B receptor subunit 1 JBrowse link 20 1,955,344 1,984,907 RGD:2315460
G Gipc1 GIPC PDZ domain containing family, member 1 JBrowse link 19 24,786,604 24,798,231 RGD:1624291
G Gper1 G protein-coupled estrogen receptor 1 JBrowse link 12 17,309,122 17,315,267 RGD:8553395
RGD:8554508
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 JBrowse link 10 42,441,723 42,760,200 RGD:1600985
RGD:8554168
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 JBrowse link 2 179,584,302 179,704,629 RGD:1600985
RGD:8554168
RGD:632958
G Gria3 glutamate ionotropic receptor AMPA type subunit 3 JBrowse link X 127,561,843 127,829,763 RGD:1600985
G Grip2 glutamate receptor interacting protein 2 JBrowse link 4 123,585,184 123,636,040 RGD:632958
G Grk2 G protein-coupled receptor kinase 2 JBrowse link 1 219,536,220 219,544,329 RGD:632163
G Grk3 G protein-coupled receptor kinase 3 JBrowse link 12 49,626,871 49,750,389 RGD:632163
G Grm4 glutamate metabotropic receptor 4 JBrowse link 20 6,745,682 6,791,521 RGD:8554275
G Grm5 glutamate metabotropic receptor 5 JBrowse link 1 151,207,846 151,785,038 RGD:2303068
G Grm7 glutamate metabotropic receptor 7 JBrowse link 4 142,452,616 143,368,460 RGD:2289008
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 11 65,060,884 65,208,842 RGD:1624291
G Hcn1 hyperpolarization-activated cyclic nucleotide-gated potassium channel 1 JBrowse link 2 50,099,576 50,499,799 RGD:2316636
G Hcn2 hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 JBrowse link 7 12,851,730 12,870,087 RGD:2316636
G Homer1 homer scaffold protein 1 JBrowse link 2 22,909,550 23,012,303 RGD:633021
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:10059401
G Htr2a 5-hydroxytryptamine receptor 2A JBrowse link 15 56,666,152 56,732,469 RGD:2303638
G Ilk integrin-linked kinase JBrowse link 1 170,578,941 170,585,192 RGD:2301744
G Inpp5j inositol polyphosphate-5-phosphatase J JBrowse link 14 83,730,861 83,742,016 RGD:1624291
G Jph4 junctophilin 4 JBrowse link 15 33,767,116 33,777,289 RGD:1624291
RGD:1600115
G Kcna4 potassium voltage-gated channel subfamily A member 4 JBrowse link 3 98,293,295 98,300,763 RGD:12907553
G Kirrel1 kirre like nephrin family adhesion molecule 1 JBrowse link 2 186,420,743 186,515,209 RGD:1624291
G Kirrel3 kirre like nephrin family adhesion molecule 3 JBrowse link 8 35,692,525 36,254,755 RGD:1624291
G Lpar1 lysophosphatidic acid receptor 1 JBrowse link 5 75,557,038 75,678,067 RGD:2317707
G Lzts1 leucine zipper tumor suppressor 1 JBrowse link 16 22,250,452 22,306,667 RGD:1299532
G Map1a microtubule-associated protein 1A JBrowse link 3 113,251,918 113,272,193 RGD:13514077
G Map2 microtubule-associated protein 2 JBrowse link 9 73,204,753 73,462,965 RGD:1624291
RGD:13514083
RGD:1600115
G Mpp2 membrane palmitoylated protein 2 JBrowse link 10 89,998,284 90,030,766 RGD:1624291
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:9831126
G Nlgn2 neuroligin 2 JBrowse link 10 56,431,586 56,444,847 RGD:9831126
G Nsf N-ethylmaleimide sensitive factor, vesicle fusing ATPase JBrowse link 10 91,879,608 91,986,242 RGD:8553508
G Ntsr1 neurotensin receptor 1 JBrowse link 3 175,982,313 176,046,345 RGD:9831116
G Ntsr2 neurotensin receptor 2 JBrowse link 6 41,917,065 41,923,780 RGD:9743898
G Prex1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 JBrowse link 3 163,329,580 163,477,822 RGD:2314615
G Prkar2b protein kinase cAMP-dependent type II regulatory subunit beta JBrowse link 6 51,265,509 51,356,383 RGD:1624291
RGD:1600115
G Psen1 presenilin 1 JBrowse link 6 107,169,514 107,221,000 RGD:1624291
RGD:13792537
G Psen2 presenilin 2 JBrowse link 13 98,513,600 98,539,347 RGD:13792537
G Rgs7bp regulator of G-protein signaling 7 binding protein JBrowse link 2 35,072,081 35,619,085 RGD:13524856
G Rtn4r reticulon 4 receptor JBrowse link 11 86,992,665 87,017,091 RGD:1624291
RGD:1600115
G Sez6 seizure related 6 homolog JBrowse link 10 64,865,802 64,915,461 RGD:1624291
G Slc12a5 solute carrier family 12 member 5 JBrowse link 3 161,433,303 161,465,078 RGD:1624291
G Slc1a2 solute carrier family 1 member 2 JBrowse link 3 92,518,679 92,665,731 RGD:619547
G Slc8a1 solute carrier family 8 member A1 JBrowse link 6 4,244,076 4,564,262 RGD:7175092
G Stau2 staufen double-stranded RNA binding protein 2 JBrowse link 5 2,257,910 2,497,429 RGD:10043163
G Syndig1 synapse differentiation inducing 1 JBrowse link 3 145,031,427 145,199,273 RGD:8554654
G Syngap1 synaptic Ras GTPase activating protein 1 JBrowse link 20 5,535,434 5,564,657 RGD:1624291
RGD:1600115
G Whrn whirlin JBrowse link 5 79,235,541 79,317,206 RGD:632479
G Zfp804a zinc finger protein 804A JBrowse link 3 69,268,348 69,574,118 RGD:13210564
RGD:1624291
G Zmynd8 zinc finger, MYND-type containing 8 JBrowse link 3 162,480,766 162,594,145 RGD:8554267

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19737
    cellular anatomical entity 19353
      dendritic shaft 68
Path 2
Term Annotations click to browse term
  cellular_component 19737
    cellular anatomical entity 19353
      cell projection 2448
        plasma membrane bounded cell projection 2389
          neuron projection 1628
            dendritic tree 778
              dendrite 776
                dendritic shaft 68
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.