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ONTOLOGY REPORT - ANNOTATIONS


Term:dendritic shaft
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Accession:GO:0043198 term browser browse the term
Definition:Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines.
Synonyms:related_synonym: trunk
 xref: NIF_Subcellular:sao2034472720


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dendritic shaft term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap5 A kinase (PRKA) anchor protein 5 JBrowse link 12 76,324,617 76,334,517 RGD:2290270
G Arhgef2 rho/rac guanine nucleotide exchange factor (GEF) 2 JBrowse link 3 88,593,105 88,649,532 RGD:2290270
G Arpc2 actin related protein 2/3 complex, subunit 2 JBrowse link 1 74,236,490 74,268,209 RGD:2290270
G Asic1 acid-sensing (proton-gated) ion channel 1 JBrowse link 15 99,670,197 99,701,130 RGD:2290270
G Baiap2 brain-specific angiogenesis inhibitor 1-associated protein 2 JBrowse link 11 119,939,916 120,006,782 RGD:2290270
G Cacna1b calcium channel, voltage-dependent, N type, alpha 1B subunit JBrowse link 2 24,603,860 24,763,200 RGD:2290270
G Cacna1c calcium channel, voltage-dependent, L type, alpha 1C subunit JBrowse link 6 118,587,240 119,197,384 RGD:2290270
G Chrna7 cholinergic receptor, nicotinic, alpha polypeptide 7 JBrowse link 7 63,098,692 63,212,526 RGD:2290270
G Cnih2 cornichon family AMPA receptor auxiliary protein 2 JBrowse link 19 5,092,868 5,098,521 RGD:2290270
G Cnih3 cornichon family AMPA receptor auxiliary protein 3 JBrowse link 1 181,350,459 181,460,641 RGD:2290270
G Cript cysteine-rich PDZ-binding protein JBrowse link 17 87,025,561 87,035,808 RGD:2290270
G Ctnnb1 catenin (cadherin associated protein), beta 1 JBrowse link 9 120,933,400 120,960,507 RGD:2290270
G Dbn1 drebrin 1 JBrowse link 13 55,473,428 55,488,126 RGD:2290270
G Dlg3 discs large MAGUK scaffold protein 3 JBrowse link X 100,767,411 100,818,410 RGD:2290270
G Drd1 dopamine receptor D1 JBrowse link 13 54,051,183 54,055,658 RGD:2290270
G Epha4 Eph receptor A4 JBrowse link 1 77,367,182 77,515,107 RGD:2290270
G Exoc4 exocyst complex component 4 JBrowse link 6 33,249,090 33,973,979 RGD:2290270
G Flna filamin, alpha JBrowse link X 74,223,461 74,249,854 RGD:2290270
G Gabbr1 gamma-aminobutyric acid (GABA) B receptor, 1 JBrowse link 17 37,045,966 37,074,305 RGD:2290270
G Gipc1 GIPC PDZ domain containing family, member 1 JBrowse link 8 83,649,408 83,664,789 RGD:2290270
G Gper1 G protein-coupled estrogen receptor 1 JBrowse link 5 139,423,150 139,427,800 RGD:2290270
G Gria1 glutamate receptor, ionotropic, AMPA1 (alpha 1) JBrowse link 11 57,011,571 57,330,244 RGD:2290270
G Gria2 glutamate receptor, ionotropic, AMPA2 (alpha 2) JBrowse link 3 80,681,450 80,804,227 RGD:2290270
G Gria3 glutamate receptor, ionotropic, AMPA3 (alpha 3) JBrowse link X 41,400,854 41,678,601 RGD:2290270
G Grip2 glutamate receptor interacting protein 2 JBrowse link 6 91,761,452 91,843,954 RGD:2290270
G Grk2 G protein-coupled receptor kinase 2 JBrowse link 19 4,285,999 4,306,222 RGD:2290270
G Grk3 G protein-coupled receptor kinase 3 JBrowse link 5 112,910,478 113,015,660 RGD:2290270
G Grm4 glutamate receptor, metabotropic 4 JBrowse link 17 27,422,387 27,513,826 RGD:2290270
G Grm5 glutamate receptor, metabotropic 5 JBrowse link 7 87,583,981 88,135,063 RGD:2290270
G Grm7 glutamate receptor, metabotropic 7 JBrowse link 6 110,645,349 111,567,230 RGD:2290270
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 16 38,089,001 38,246,084 RGD:2290270
G Hcn1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 JBrowse link 13 117,602,320 117,981,028 RGD:2290270
G Hcn2 hyperpolarization-activated, cyclic nucleotide-gated K+ 2 JBrowse link 10 79,716,634 79,736,108 RGD:2290270
G Homer1 homer scaffolding protein 1 JBrowse link 13 93,303,757 93,405,129 RGD:2290270
G Hspa8 heat shock protein 8 JBrowse link 9 40,801,276 40,805,202 RGD:2290270
G Htr2a 5-hydroxytryptamine (serotonin) receptor 2A JBrowse link 14 74,640,874 74,706,859 RGD:2290270
G Ilk integrin linked kinase JBrowse link 7 105,736,590 105,742,925 RGD:2290270
G Inpp5j inositol polyphosphate 5-phosphatase J JBrowse link 11 3,494,272 3,505,501 RGD:2290270
G Jph4 junctophilin 4 JBrowse link 14 55,106,826 55,116,935 RGD:2290270
G Kcna4 potassium voltage-gated channel, shaker-related subfamily, member 4 JBrowse link 2 107,290,589 107,326,804 RGD:2290270
G Kirrel kirre like nephrin family adhesion molecule 1 JBrowse link 3 87,078,592 87,174,777 RGD:2290270
G Kirrel3 kirre like nephrin family adhesion molecule 3 JBrowse link 9 34,485,853 35,040,807 RGD:2290270
G Lpar1 lysophosphatidic acid receptor 1 JBrowse link 4 58,435,252 58,554,027 RGD:2290270
G Lzts1 leucine zipper, putative tumor suppressor 1 JBrowse link 8 69,132,659 69,184,249 RGD:2290270
G Map1a microtubule-associated protein 1 A JBrowse link 2 121,289,590 121,310,832 RGD:2290270
G Map2 microtubule-associated protein 2 JBrowse link 1 66,175,202 66,442,583 RGD:2290270
G Mpp2 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) JBrowse link 11 102,057,015 102,088,638 RGD:2290270
G Nlgn1 neuroligin 1 JBrowse link 3 25,421,808 26,332,866 RGD:2290270
G Nlgn2 neuroligin 2 JBrowse link 11 69,823,123 69,837,784 RGD:2290270
G Nsf N-ethylmaleimide sensitive fusion protein JBrowse link 11 103,821,782 103,954,056 RGD:2290270
G Ntsr1 neurotensin receptor 1 JBrowse link 2 180,499,976 180,544,979 RGD:2290270
G Ntsr2 neurotensin receptor 2 JBrowse link 12 16,653,443 16,660,236 RGD:2290270
G Prex1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 JBrowse link 2 166,566,345 166,713,832 RGD:2290270
G Prkar2b protein kinase, cAMP dependent regulatory, type II beta JBrowse link 12 31,958,450 32,061,648 RGD:2290270
G Psen1 presenilin 1 JBrowse link 12 83,688,152 83,735,095 RGD:2290270
G Psen2 presenilin 2 JBrowse link 1 180,227,004 180,263,467 RGD:2290270
G Rgs7bp regulator of G-protein signalling 7 binding protein JBrowse link 13 104,945,904 105,054,930 RGD:2290270
G Rtn4r reticulon 4 receptor JBrowse link 16 18,127,642 18,152,408 RGD:2290270
G Sez6 seizure related gene 6 JBrowse link 11 77,930,587 77,979,052 RGD:2290270
G Slc12a5 solute carrier family 12, member 5 JBrowse link 2 164,960,846 164,999,731 RGD:2290270
G Slc1a2 solute carrier family 1 (glial high affinity glutamate transporter), member 2 JBrowse link 2 102,658,239 102,790,784 RGD:2290270
G Slc8a1 solute carrier family 8 (sodium/calcium exchanger), member 1 JBrowse link 17 81,373,105 81,738,387 RGD:2290270
G Stau2 staufen double-stranded RNA binding protein 2 JBrowse link 1 16,228,803 16,520,332 RGD:2290270
G Syndig1 synapse differentiation inducing 1 JBrowse link 2 149,830,783 150,004,392 RGD:2290270
G Syngap1 synaptic Ras GTPase activating protein 1 homolog (rat) JBrowse link 17 26,941,212 26,972,434 RGD:2290270
G Whrn whirlin JBrowse link 4 63,414,908 63,496,083 RGD:2290270
G Zfp804a zinc finger protein 804A JBrowse link 2 82,050,129 82,259,879 RGD:2290270
G Zmynd8 zinc finger, MYND-type containing 8 JBrowse link 2 165,784,152 165,898,981 RGD:2290270

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 23107
    cellular anatomical entity 18607
      dendritic shaft 68
Path 2
Term Annotations click to browse term
  cellular_component 23107
    cellular anatomical entity 18607
      cell projection 2457
        plasma membrane bounded cell projection 2258
          neuron projection 1510
            dendritic tree 705
              dendrite 702
                dendritic shaft 68
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.