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ONTOLOGY REPORT - ANNOTATIONS

Term:dendritic spine
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Accession:GO:0043197 term browser browse the term
Definition:A small, membranous protrusion from a dendrite that forms a postsynaptic compartment, typically receiving input from a single presynapse. They function as partially isolated biochemical and an electrical compartments. Spine morphology is variable:they can be thin, stubby, mushroom, or branched, with a continuum of intermediate morphologies. They typically terminate in a bulb shape, linked to the dendritic shaft by a restriction. Spine remodeling is though to be involved in synaptic plasticity.
Synonyms:exact_synonym: dendrite spine
 narrow_synonym: branched dendritic spine;   mushroom dendritic spine;   sessile dendritic spine;   stubby dendritic spine;   thin dendritic spine
 xref: NIF_Subcellular:sao1799103720;   Wikipedia:Dendritic_spine

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dendritic spine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd17b abhydrolase domain containing 17B, depalmitoylase located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936503:7,902,116...7,943,300
Ensembl chrNW_004936503:7,901,522...7,943,300 		JBrowse link
G Abi2 abl interactor 2 is_active_in ISO (PMID:15572692) UniProt PMID:15572692 NCBI chrNW_004936631:30,109...101,748
Ensembl chrNW_004936631:30,199...98,511 		JBrowse link
G Abi3bp ABI family member 3 binding protein located_in ISO PMID:22485184
PMID:22496823 		ARUK-UCL PMID:22485184 PMID:22496823 RGD:42721990 RGD:42722000 NCBI chrNW_004936630:2,286,089...2,518,588
Ensembl chrNW_004936630:2,286,153...2,517,511 		JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase located_in ISO (PMID:23365224) MGI PMID:23365224 NCBI chrNW_004936481:9,823,790...9,847,291
Ensembl chrNW_004936481:9,824,392...9,847,104 		JBrowse link
G Abr ABR activator of RhoGEF and GTPase located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936538:6,674,595...6,819,511
Ensembl chrNW_004936538:6,674,907...6,816,674 		JBrowse link
G Actn1 actinin alpha 1 located_in ISO PMID:12223541 UniProt PMID:12223541 RGD:8554161 NCBI chrNW_004936495:12,124,489...12,217,223
Ensembl chrNW_004936495:12,124,443...12,217,242 		JBrowse link
G Adam10 ADAM metallopeptidase domain 10 located_in ISO PMID:17301176 SynGO-UCL PMID:17301176 RGD:12907557 NCBI chrNW_004936471:19,760,709...19,911,759
Ensembl chrNW_004936471:19,758,118...19,911,759 		JBrowse link
G Add1 adducin 1 ISO RGD PMID:8624703 RGD:1624954 NCBI chrNW_004936477:20,695,109...20,766,053
Ensembl chrNW_004936477:20,691,951...20,766,152 		JBrowse link
G Adora1 adenosine A1 receptor located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:1,430,128...1,508,626
Ensembl chrNW_004936567:1,429,817...1,462,532 		JBrowse link
G Adrb2 adrenoceptor beta 2 ISO RGD PMID:11441182 RGD:1598758 NCBI chrNW_004936504:5,985,407...5,987,453
Ensembl chrNW_004936504:5,985,960...5,987,210 		JBrowse link
G Akap5 A-kinase anchoring protein 5 located_in ISO
IEA 		RGD
TreeGrafter		 PMID:15951119 GO_REF:0000118 RGD:2312610 NCBI chrNW_004936495:8,173,521...8,179,249
Ensembl chrNW_004936495:8,176,249...8,177,556 		JBrowse link
G Als2 alsin Rho guanine nucleotide exchange factor ALS2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936726:940,696...1,015,771
Ensembl chrNW_004936726:939,341...1,015,799 		JBrowse link
G Apba1 amyloid beta precursor protein binding family A member 1 part_of
located_in 		ISO
IEA 		PMID:25378388 CACAO
TreeGrafter		 PMID:25378388 GO_REF:0000118 RGD:10047276 NCBI chrNW_004936503:5,699,580...5,770,920
Ensembl chrNW_004936503:5,699,558...5,771,030 		JBrowse link
G Apba2 amyloid beta precursor protein binding family A member 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936483:1,062,971...1,315,059
Ensembl chrNW_004936483:1,250,152...1,315,088 		JBrowse link
G Apba3 amyloid beta precursor protein binding family A member 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936588:2,124,286...2,130,085
Ensembl chrNW_004936588:2,124,396...2,130,085 		JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 ISO RGD PMID:16330549 RGD:2301201 NCBI chrNW_004936842:452,682...476,533
Ensembl chrNW_004936842:452,681...476,513 		JBrowse link
G App amyloid beta precursor protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936640:1,549,977...1,787,436
Ensembl chrNW_004936640:1,550,167...1,787,286 		JBrowse link
G Arc activity regulated cytoskeleton associated protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:9,185,145...9,188,260
Ensembl chrNW_004936470:9,185,145...9,186,320 		JBrowse link
G Arf4 ARF GTPase 4 located_in ISO (PMID:23050017) MGI PMID:23050017 NCBI chrNW_004936473:7,907,277...7,926,816 JBrowse link
G Arfgef2 ARF guanine nucleotide exchange factor 2 located_in ISO PMID:15198677 UniProt PMID:15198677 RGD:1304338 NCBI chrNW_004936514:5,172,752...5,262,823
Ensembl chrNW_004936514:5,172,584...5,262,836 		JBrowse link
G Arhgap33 Rho GTPase activating protein 33 ISO RGD PMID:24003235 RGD:13508596 NCBI chrNW_004936570:539,839...553,018
Ensembl chrNW_004936570:539,830...553,086 		JBrowse link
G Arhgap44 Rho GTPase activating protein 44 located_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936595:5,373,645...5,542,915
Ensembl chrNW_004936595:5,373,476...5,543,073 		JBrowse link
G Arpc2 actin related protein 2/3 complex subunit 2 ISO RGD PMID:18509026 RGD:11530067 NCBI chrNW_004936569:758,358...786,995
Ensembl chrNW_004936569:758,199...786,760 		JBrowse link
G Arrb1 arrestin beta 1 ISO RGD PMID:1517224 RGD:631708 NCBI chrNW_004936498:4,089,621...4,172,749
Ensembl chrNW_004936498:4,094,893...4,172,755 		JBrowse link
G Arrb2 arrestin beta 2 ISO RGD PMID:1517224 RGD:631708 NCBI chrNW_004936677:3,173,054...3,181,475
Ensembl chrNW_004936677:3,172,925...3,181,520 		JBrowse link
G Asap1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 located_in ISO (PMID:23050017) MGI PMID:23050017 NCBI chrNW_004936470:18,340,120...18,640,396
Ensembl chrNW_004936470:18,339,616...18,640,624 		JBrowse link
G Asic2 acid sensing ion channel subunit 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:938,266...2,011,154
Ensembl chrNW_004936538:938,752...2,011,177 		JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 ISO RGD PMID:11950769 RGD:727361 NCBI chrNW_004936740:489,357...514,235
Ensembl chrNW_004936740:488,154...514,308 		JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 ISO RGD PMID:15758177 RGD:9684984 NCBI chrNW_004936594:4,797,068...4,863,409
Ensembl chrNW_004936594:4,797,018...4,865,327 		JBrowse link
G Bcr BCR activator of RhoGEF and GTPase located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936619:288,377...432,297
Ensembl chrNW_004936619:288,340...432,315 		JBrowse link
G Calb1 calbindin 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936544:3,858,344...3,881,985
Ensembl chrNW_004936544:3,858,344...3,882,106 		JBrowse link
G Cald1 caldesmon 1 ISO RGD PMID:11134639 PMID:18582438 RGD:2303067 RGD:2303068 NCBI chrNW_004936579:868,681...1,046,198
Ensembl chrNW_004936579:868,500...1,046,257 		JBrowse link
G Camk2a calcium/calmodulin dependent protein kinase II alpha located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:4,636,863...4,700,887
Ensembl chrNW_004936504:4,638,176...4,700,984 		JBrowse link
G Canx calnexin ISO RGD PMID:1331857 RGD:2313162 NCBI chrNW_004936739:1,051,853...1,085,658
Ensembl chrNW_004936739:1,051,240...1,086,405 		JBrowse link
G Capzb capping actin protein of muscle Z-line subunit beta ISO RGD PMID:20545768 RGD:9685031 NCBI chrNW_004936474:5,594,193...5,656,665
Ensembl chrNW_004936474:5,594,152...5,709,315 		JBrowse link
G Cd3e CD3e molecule located_in ISO (PMID:17502348) ARUK-UCL PMID:17502348 NCBI chrNW_004936542:3,379,361...3,390,677 JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 located_in ISO PMID:12223541 UniProt PMID:12223541 RGD:8554161 NCBI chrNW_004936538:2,411,194...2,415,106
Ensembl chrNW_004936538:2,413,967...2,414,890 		JBrowse link
G Cfl1 cofilin 1 ISO RGD PMID:24760020 RGD:11570414 NCBI chrNW_004936599:3,678,724...3,682,314
Ensembl chrNW_004936599:3,677,804...3,682,307 		JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit ISO RGD PMID:12077196 RGD:1600985 NCBI chrNW_004937351:32,324...46,871
Ensembl chrNW_004937351:34,921...47,246 		JBrowse link
G Cnih2 cornichon family AMPA receptor auxiliary protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,310,873...3,316,575
Ensembl chrNW_004936599:3,310,872...3,316,573 		JBrowse link
G Cnn3 calponin 3 ISO RGD PMID:11134639 PMID:18582438 RGD:2303067 RGD:2303068 NCBI chrNW_004936537:4,308,951...4,337,990
Ensembl chrNW_004936537:4,308,951...4,337,998 		JBrowse link
G Comt catechol-O-methyltransferase ISO RGD PMID:7617303 RGD:8662339 NCBI chrNW_004936619:3,847,059...3,883,866
Ensembl chrNW_004936619:3,876,299...3,882,747 		JBrowse link
G Crhr1 corticotropin releasing hormone receptor 1 NOT ISO Purkinje cells RGD PMID:12911751 RGD:1626245 NCBI chrNW_004936541:2,288,847...2,333,129
Ensembl chrNW_004936541:2,288,841...2,331,689 		JBrowse link
G Cript CXXC repeat containing interactor of PDZ3 domain ISO RGD PMID:9581762 RGD:632510 NCBI chrNW_004936508:5,650,057...5,658,966
Ensembl chrNW_004936508:5,650,057...5,658,950 		JBrowse link
G Cryab crystallin alpha B ISO RGD PMID:22617993 RGD:10402750 NCBI chrNW_004936612:2,532,851...2,536,473
Ensembl chrNW_004936612:2,532,812...2,537,495 		JBrowse link
G Ctnnd1 catenin delta 1 ISO RGD PMID:12727444 RGD:2316208 NCBI chrNW_004936581:4,750,845...4,802,262
Ensembl chrNW_004936581:4,750,947...4,802,289 		JBrowse link
G Cttnbp2 cortactin binding protein 2 located_in IEA UniProt
Ensembl		 GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004936589:1,385,342...1,522,911
Ensembl chrNW_004936589:1,393,141...1,522,048 		JBrowse link
G Cyfip1 cytoplasmic FMR1 interacting protein 1 ISO RGD PMID:24667445 RGD:11568064 NCBI chrNW_004936471:38,264,455...38,331,995
Ensembl chrNW_004936471:38,267,703...38,332,218 		JBrowse link
G Dbn1 drebrin 1 ISO RGD PMID:12878700 RGD:10398728 NCBI chrNW_004936597:1,735,589...1,751,628
Ensembl chrNW_004936597:1,735,380...1,747,569 		JBrowse link
G Dgki diacylglycerol kinase iota located_in ISO (PMID:21119615) MGI PMID:21119615 NCBI chrNW_004936592:1,843,438...2,136,905
Ensembl chrNW_004936592:1,844,315...2,270,814 		JBrowse link
G Dip2a disco interacting protein 2 homolog A located_in ISO (PMID:31600191) UniProt PMID:31600191 NCBI chrNW_004936778:49,130...123,345
Ensembl chrNW_004936778:49,122...123,458 		JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:487,918...513,843
Ensembl chrNW_004936595:485,554...513,815 		JBrowse link
G Dlgap2 DLG associated protein 2 ISO RGD PMID:24003235 RGD:13508596 NCBI chrNW_004936615:837,217...932,487
Ensembl chrNW_004936615:316,449...956,192 		JBrowse link
G Dlgap3 DLG associated protein 3 ISO RGD PMID:15207911 RGD:1302351 NCBI chrNW_004936474:17,496,203...17,535,885
Ensembl chrNW_004936474:17,493,125...17,535,885 		JBrowse link
G Dnajb1 DnaJ heat shock protein family (Hsp40) member B1 ISO RGD PMID:9878698 RGD:10059325 NCBI chrNW_004936659:3,039,304...3,051,373
Ensembl chrNW_004936659:3,039,277...3,042,972 		JBrowse link
G Dnm3 dynamin 3 located_in ISO PMID:17880892 UniProt PMID:17880892 RGD:8553820 NCBI chrNW_004936481:14,971,977...15,411,253
Ensembl chrNW_004936481:14,971,947...15,411,288 		JBrowse link
G Dock10 dedicator of cytokinesis 10 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:6,274,747...6,462,265
Ensembl chrNW_004936569:6,274,714...6,462,357 		JBrowse link
G Drd1 dopamine receptor D1 located_in ISO
IEA 		RGD
Ensembl
UniProt		 PMID:11818555 GO_REF:0000044 GO_REF:0000107 RGD:70242 NCBI chrNW_004936609:790,647...795,187
Ensembl chrNW_004936609:792,276...793,613 		JBrowse link
G Drd2 dopamine receptor D2 ISO RGD PMID:7623147 RGD:2311574 NCBI chrNW_004936612:1,094,686...1,154,149
Ensembl chrNW_004936612:1,094,680...1,154,798 		JBrowse link
G Drd4 dopamine receptor D4 ISO MMO:0000663 RGD PMID:10819901 PMID:11902112 RGD:1625058 RGD:728755 NCBI chrNW_004936888:468,334...471,254
Ensembl chrNW_004936888:468,403...471,205 		JBrowse link
G Drd5 dopamine receptor D5 ISO RGD PMID:21749912 RGD:5686425 NCBI chrNW_004936477:16,860,222...16,863,505
Ensembl chrNW_004936477:16,861,773...16,863,215 		JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 located_in ISO (PMID:16980328) UniProt
RGD		 PMID:16980328 PMID:20531346 RGD:11251757 NCBI chrNW_004936552:1,787,687...1,926,516 JBrowse link
G Dvl1 dishevelled segment polarity protein 1 located_in ISO PMID:21670302 ParkinsonsUK-UCL PMID:21670302 RGD:10449514 NCBI chrNW_004936737:1,797,348...1,811,043
Ensembl chrNW_004936737:1,797,326...1,810,286 		JBrowse link
G Eef2k eukaryotic elongation factor 2 kinase located_in ISO PMID:12711090 SynGO-UCL PMID:12711090 RGD:10401640 NCBI chrNW_004936501:7,160,134...7,205,231
Ensembl chrNW_004936501:7,160,134...7,207,377 		JBrowse link
G Epha4 EPH receptor A4 located_in ISO PMID:24658113 ARUK-UCL
RGD		 PMID:19086003 PMID:24658113 RGD:12911004 RGD:5688744 NCBI chrNW_004936569:3,539,269...3,670,322
Ensembl chrNW_004936569:3,540,053...3,670,348 		JBrowse link
G Ephb2 EPH receptor B2 located_in ISO MMO:0000686 RGD PMID:16394100 RGD:2302413 NCBI chrNW_004936474:8,109,800...8,203,106
Ensembl chrNW_004936474:8,109,031...8,203,106 		JBrowse link
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936472:11,891,234...12,100,202
Ensembl chrNW_004936472:11,887,767...12,100,242 		JBrowse link
G Fbxo2 F-box protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:521,235...526,151
Ensembl chrNW_004936474:521,123...526,959 		JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb located_in ISO (PMID:17502348) ARUK-UCL PMID:17502348 NCBI chrNW_004937131:80,014...96,114 JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936513:1,290,038...1,327,850
Ensembl chrNW_004936513:1,289,558...1,327,856 		JBrowse link
G Frmpd4 FERM and PDZ domain containing 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:1,923,328...2,469,067
Ensembl chrNW_004936470:1,923,835...2,470,564 		JBrowse link
G Fus FUS RNA binding protein ISO RGD PMID:15843054 RGD:9685711 NCBI chrNW_004936501:13,529,732...13,541,102
Ensembl chrNW_004936501:13,529,803...13,540,764 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 located_in IEA UniProt
Ensembl		 GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004936566:2,354,301...2,425,140
Ensembl chrNW_004936566:2,354,441...2,425,176 		JBrowse link
G Gabbr1 gamma-aminobutyric acid type B receptor subunit 1 ISO RGD PMID:16983643 RGD:2315473 NCBI chrNW_004936723:1,108,105...1,137,602
Ensembl chrNW_004936723:1,107,995...1,137,178 		JBrowse link
G Gabra1 gamma-aminobutyric acid type A receptor subunit alpha1 is_active_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:1,806,721...1,859,227
Ensembl chrNW_004936515:1,805,239...1,859,600 		JBrowse link
G Gabrb2 gamma-aminobutyric acid type A receptor subunit beta2 is_active_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:2,127,107...2,359,697
Ensembl chrNW_004936515:2,127,693...2,355,090 		JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta3 is_active_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:39,791,633...40,193,049
Ensembl chrNW_004936471:39,791,613...40,187,923 		JBrowse link
G Gabrg2 gamma-aminobutyric acid type A receptor subunit gamma2 is_active_in ISO (PMID:25025157) UniProt PMID:25025157 NCBI chrNW_004936515:1,609,370...1,670,412
Ensembl chrNW_004936515:1,607,722...1,671,336 		JBrowse link
G Gipc1 GIPC PDZ domain containing family member 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:3,019,829...3,030,280
Ensembl chrNW_004936659:3,012,012...3,026,883 		JBrowse link
G Gphn gephyrin is_active_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:9,970,683...10,565,467
Ensembl chrNW_004936495:9,972,007...10,564,591 		JBrowse link
G Gpm6a glycoprotein M6A located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936516:6,339,058...6,647,412
Ensembl chrNW_004936516:6,338,819...6,481,425 		JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 located_in ISO
IEA 		MMO:0000538 ex vivo light microscopy with immunohistochemistry RGD
Ensembl		 PMID:12077196 PMID:16338934 PMID:23844251 GO_REF:0000107 RGD:1600985 RGD:2312658 RGD:405100729 NCBI chrNW_004936515:8,937,391...9,236,438
Ensembl chrNW_004936515:8,940,009...9,083,151 		JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 located_in ISO PMID:11348590
MMO:0000686 		RGD
UniProt		 PMID:11348590 PMID:12077196 PMID:16157387 PMID:17207780 RGD:152995269 RGD:1600985 RGD:1642304 RGD:8553683 NCBI chrNW_004936576:3,800,369...3,940,324
Ensembl chrNW_004936576:3,800,075...3,941,003 		JBrowse link
G Gria3 glutamate ionotropic receptor AMPA type subunit 3 located_in ISO PMID:11348590 RGD
UniProt		 PMID:11348590 PMID:12077196 PMID:17207780 RGD:1600985 RGD:1642304 RGD:8553683 NCBI chrNW_004936479:7,050,018...7,323,047
Ensembl chrNW_004936479:7,050,016...7,323,196 		JBrowse link
G Gria4 glutamate ionotropic receptor AMPA type subunit 4 located_in ISO PMID:20032460 ARUK-UCL PMID:20032460 RGD:12907563 NCBI chrNW_004936551:2,426,840...2,760,042
Ensembl chrNW_004936551:2,425,080...2,760,189 		JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936687:20,126...1,421,075
Ensembl chrNW_004936687:549,947...1,421,133 		JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 located_in ISO (PMID:15663482) RGD
MGI		 PMID:15663482 PMID:17207780 RGD:1642304 NCBI chrNW_004936669:814,330...838,881
Ensembl chrNW_004936669:814,330...839,208 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A located_in ISO PMID:16221859
PMID:26679993 		MGI
UniProt		 PMID:16221859 PMID:26679993 RGD:11085451 RGD:8554784 NCBI chrNW_004936530:8,286,101...8,612,183
Ensembl chrNW_004936530:8,287,574...8,608,343 		JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:17207780 RGD:1642304 NCBI chrNW_004936587:3,406,055...3,806,956
Ensembl chrNW_004936587:3,405,698...3,804,664 		JBrowse link
G Grip1 glutamate receptor interacting protein 1 ISO MMO:0000686 RGD PMID:17626212 RGD:152995392 NCBI chrNW_004936545:4,353,056...4,606,196
Ensembl chrNW_004936545:4,353,040...5,002,725 		JBrowse link
G Grk2 G protein-coupled receptor kinase 2 ISO MMO:0000538 ex vivo light microscopy with immunohistochemistry RGD PMID:1403099 RGD:632163 NCBI chrNW_004936599:2,437,061...2,456,141
Ensembl chrNW_004936599:2,437,032...2,456,147 		JBrowse link
G Grk3 G protein-coupled receptor kinase 3 ISO MMO:0000538 ex vivo light microscopy with immunohistochemistry RGD PMID:1403099 RGD:632163 NCBI chrNW_004936657:425,902...522,331
Ensembl chrNW_004936657:426,787...521,198 		JBrowse link
G Grm1 glutamate metabotropic receptor 1 ISO RGD PMID:18582438 RGD:2303068 NCBI chrNW_004936625:91,229...468,242
Ensembl chrNW_004936625:90,299...466,395 		JBrowse link
G Grm3 glutamate metabotropic receptor 3 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936653:345,770...553,460
Ensembl chrNW_004936653:392,855...553,498 		JBrowse link
G Grm5 glutamate metabotropic receptor 5 ISO RGD PMID:18582438 RGD:2303068 NCBI chrNW_004936736:623,118...1,060,273
Ensembl chrNW_004936736:623,013...1,064,054 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO RGD PMID:17329210 RGD:1641844 NCBI chrNW_004936536:6,730,070...6,893,818
Ensembl chrNW_004936536:6,730,062...6,894,303 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:24990929 RGD:10002784 NCBI chrNW_004936828:827,660...839,088
Ensembl chrNW_004936828:828,837...838,720 		JBrowse link
G Homer1 homer scaffold protein 1 located_in ISO PMID:30021165 UniProt PMID:30021165 RGD:14995321 NCBI chrNW_004936549:7,189,588...7,320,117
Ensembl chrNW_004936549:7,188,850...7,320,312 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:11230095 RGD:10059401 NCBI chrNW_004936542:7,577,192...7,581,598
Ensembl chrNW_004936542:7,577,149...7,581,923 		JBrowse link
G Igf2bp1 insulin like growth factor 2 mRNA binding protein 1 ISO RGD PMID:12716932 RGD:40902866 NCBI chrNW_004936490:12,430,343...12,468,794
Ensembl chrNW_004936490:12,430,008...12,469,083 		JBrowse link
G Itgb1 integrin subunit beta 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936574:1,465,981...1,495,717
Ensembl chrNW_004936574:1,465,897...1,495,762 		JBrowse link
G Itpka inositol-trisphosphate 3-kinase A located_in ISO PMID:19890013 MGI PMID:19890013 RGD:8553536 NCBI chrNW_004936471:4,840,113...4,848,881
Ensembl chrNW_004936471:4,840,152...4,848,881 		JBrowse link
G Itsn1 intersectin 1 ISO RGD PMID:19258322 RGD:13461864 NCBI chrNW_004936500:8,490,514...8,678,127
Ensembl chrNW_004936500:8,468,940...8,612,942 		JBrowse link
G Kcna4 potassium voltage-gated channel subfamily A member 4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936533:7,588,965...7,596,467
Ensembl chrNW_004936533:7,588,950...7,596,696 		JBrowse link
G Kcnd1 potassium voltage-gated channel subfamily D member 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936721:881,162...890,939
Ensembl chrNW_004936721:880,774...889,874 		JBrowse link
G Kcnd2 potassium voltage-gated channel subfamily D member 2 located_in IEA
ISO 		TreeGrafter
Ensembl
UniProt
RGD		 PMID:16141270 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 RGD:1581430 NCBI chrNW_004936605:4,370,222...4,828,972
Ensembl chrNW_004936605:4,372,671...4,825,423 		JBrowse link
G Kcnd3 potassium voltage-gated channel subfamily D member 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936690:417,907...627,025
Ensembl chrNW_004936690:422,883...621,308 		JBrowse link
G Kcnj2 potassium inwardly rectifying channel subfamily J member 2 ISO RGD PMID:18076085 RGD:7247433 NCBI chrNW_004936655:3,447,026...3,459,569
Ensembl chrNW_004936655:3,447,321...3,458,312 		JBrowse link
G Kcnn2 potassium calcium-activated channel subfamily N member 2 located_in ISO (PMID:17347645) RGD
MGI		 PMID:17347645 PMID:21521760 RGD:7205439 NCBI chrNW_004937043:133,981...269,593 JBrowse link
G Lama2 laminin subunit alpha 2 ISO RGD PMID:9295190 RGD:1600208 NCBI chrNW_004936639:259,662...825,170
Ensembl chrNW_004936639:259,889...825,065 		JBrowse link
G LOC101954950 aromatase ISO RGD PMID:14694190 RGD:1600839 NCBI chrNW_004936471:13,107,603...13,136,910
Ensembl chrNW_004936471:13,107,603...13,136,910 		JBrowse link
G LOC101971822 opioid-binding protein/cell adhesion molecule ISO MMO:0000663 RGD PMID:12617969 RGD:405650376 NCBI chrNW_004936572:77,755...100,166 JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 ISO RGD PMID:16638019 RGD:2317707 NCBI chrNW_004936559:2,187,791...2,331,587
Ensembl chrNW_004936559:2,259,420...2,332,806 		JBrowse link
G Lrrc4 leucine rich repeat containing 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:15,197,973...15,202,256
Ensembl chrNW_004936479:15,198,229...15,202,166 		JBrowse link
G Lrrc7 leucine rich repeat containing 7 ISO RGD PMID:8824323 RGD:1299511 NCBI chrNW_004936591:1,905,434...2,417,053
Ensembl chrNW_004936591:1,900,334...2,416,912 		JBrowse link
G Lzts1 leucine zipper tumor suppressor 1 located_in ISO
IEA 		RGD
TreeGrafter		 PMID:12415013 PMID:15703396 GO_REF:0000118 RGD:1299532 RGD:1600102 NCBI chrNW_004936555:4,330,878...4,384,883
Ensembl chrNW_004936555:4,330,787...4,384,932 		JBrowse link
G Lzts3 leucine zipper tumor suppressor family member 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936485:15,538,302...15,547,778
Ensembl chrNW_004936485:15,538,337...15,548,148 		JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate ISO RGD PMID:2332803 RGD:9685308 NCBI chrNW_004936679:2,373,104...2,379,230 JBrowse link
G Mpp2 MAGUK p55 scaffold protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:420,546...446,671
Ensembl chrNW_004936541:418,499...446,676 		JBrowse link
G Mt3 metallothionein 3 ISO RGD PMID:8911664 RGD:9685810 NCBI chrNW_004936475:8,864,512...8,866,516
Ensembl chrNW_004936475:8,864,675...8,866,506 		JBrowse link
G Mtmr2 myotubularin related protein 2 located_in ISO PMID:20410104 BHF-UCL PMID:20410104 RGD:8553482 NCBI chrNW_004936700:1,790,592...1,873,019
Ensembl chrNW_004936700:1,790,064...1,873,034 		JBrowse link
G Myh10 myosin heavy chain 10 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,697,283...1,832,571
Ensembl chrNW_004936595:1,694,102...1,832,364 		JBrowse link
G Myl7 myosin light chain 7 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:19,099,991...19,101,985
Ensembl chrNW_004936478:19,100,029...19,102,199 		JBrowse link
G Mylk2 myosin light chain kinase 2 ISO RGD PMID:16515842 RGD:1600505 NCBI chrNW_004936485:18,782,890...18,795,942
Ensembl chrNW_004936485:18,782,887...18,795,948 		JBrowse link
G Myo5b myosin VB ISO RGD PMID:16338934 RGD:2312658 NCBI chrNW_004936497:12,932,367...13,236,916
Ensembl chrNW_004936497:12,932,789...13,234,244 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 ISO RGD PMID:11007883 RGD:5688258 NCBI chrNW_004936496:14,844,923...15,102,922
Ensembl chrNW_004936496:14,844,855...15,016,454 		JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:17,254,777...17,374,725
Ensembl chrNW_004936471:17,252,234...17,374,804 		JBrowse link
G Negr1 neuronal growth regulator 1 ISO MMO:0000663 RGD PMID:12617969 RGD:405650376 NCBI chrNW_004936591:112,864...903,598
Ensembl chrNW_004936591:113,013...899,271 		JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936600:2,518,193...2,590,336
Ensembl chrNW_004936600:2,518,265...2,590,344 		JBrowse link
G Nlgn1 neuroligin 1 located_in ISO PMID:15519238 BHF-UCL PMID:15519238 RGD:10047210 NCBI chrNW_004936703:951,935...1,415,991
Ensembl chrNW_004936703:758,647...1,414,185 		JBrowse link
G Nos1 nitric oxide synthase 1 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936558:5,162,471...5,302,488
Ensembl chrNW_004936558:5,233,459...5,301,414 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 located_in IEA Ensembl
UniProt		 GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004936490:15,206,194...15,213,858
Ensembl chrNW_004936490:15,206,191...15,213,867 		JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:21179518 RGD:4892203 NCBI chrNW_004936504:10,960,069...11,056,834
Ensembl chrNW_004936504:10,959,192...11,056,856 		JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 located_in ISO
IEA 		RGD
TreeGrafter		 PMID:18582438 GO_REF:0000118 RGD:2303068 NCBI chrNW_004936680:267,850...621,467
Ensembl chrNW_004936680:267,596...615,928 		JBrowse link
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:9763490 RGD:9831116 NCBI chrNW_004936514:10,240,990...10,272,859
Ensembl chrNW_004936514:10,241,020...10,272,816 		JBrowse link
G Numb NUMB endocytic adaptor protein located_in ISO MMO:0000686 RGD PMID:16394100 RGD:2302413 NCBI chrNW_004936488:2,579,017...2,742,961 JBrowse link
G Ophn1 oligophrenin 1 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936635:6,966...243,209
Ensembl chrNW_004936635:6,923...244,408 		JBrowse link
G P2rx2 purinergic receptor P2X 2 ISO RGD PMID:11160443 RGD:1642669 NCBI chrNW_004936660:2,570,627...2,574,081
Ensembl chrNW_004936660:2,570,625...2,573,296 		JBrowse link
G P2rx3 purinergic receptor P2X 3 ISO RGD PMID:9721930 RGD:1642677 NCBI chrNW_004936581:5,116,276...5,146,378
Ensembl chrNW_004936581:5,115,492...5,146,634 		JBrowse link
G P2rx4 purinergic receptor P2X 4 ISO RGD PMID:11160443 RGD:1642669 NCBI chrNW_004936558:3,062,279...3,077,493
Ensembl chrNW_004936558:3,059,886...3,077,451 		JBrowse link
G P2rx6 purinergic receptor P2X 6 ISO RGD PMID:11160443 RGD:1642669 NCBI chrNW_004936619:2,560,685...2,567,612
Ensembl chrNW_004936619:2,560,759...2,566,355 		JBrowse link
G Palm paralemmin located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936588:270,431...283,925
Ensembl chrNW_004936588:270,425...283,974 		JBrowse link
G Palmd palmdelphin located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936537:131,997...177,921
Ensembl chrNW_004936537:130,496...177,921 		JBrowse link
G Pde4b phosphodiesterase 4B located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936591:5,152,491...5,666,728
Ensembl chrNW_004936591:5,152,441...5,573,129 		JBrowse link
G Pdlim4 PDZ and LIM domain 4 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936647:2,891,025...2,905,197
Ensembl chrNW_004936647:2,890,510...2,905,203 		JBrowse link
G Pdyn prodynorphin ISO RGD PMID:16966485 RGD:401854252 NCBI chrNW_004936485:16,559,371...16,571,461
Ensembl chrNW_004936485:16,559,217...16,571,678 		JBrowse link
G Pgr progesterone receptor ISO RGD PMID:18720413 RGD:7248705 NCBI chrNW_004936551:6,498,553...6,573,212
Ensembl chrNW_004936551:6,498,553...6,573,222 		JBrowse link
G Pick1 protein interacting with PRKCA 1 ISO MMO:0000538 RGD PMID:11007883 RGD:5688258 NCBI chrNW_004936492:3,098,196...3,115,921
Ensembl chrNW_004936492:3,097,629...3,116,526 		JBrowse link
G Ppfia2 PTPRF interacting protein alpha 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936698:2,090,768...2,531,366
Ensembl chrNW_004936698:2,094,374...2,531,465 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7724573 RGD:2306152 NCBI chrNW_004936599:2,345,982...2,348,494
Ensembl chrNW_004936599:2,344,552...2,348,494 		JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma ISO RGD PMID:7724573 RGD:2306152 NCBI chrNW_004936558:3,631,794...3,651,754
Ensembl chrNW_004936558:3,630,561...3,651,786 		JBrowse link
G Ppp1r2 protein phosphatase 1 regulatory inhibitor subunit 2 ISO RGD PMID:12270929 RGD:1299366 NCBI chrNW_004936833:225,330...238,222 JBrowse link
G Ppp1r9a protein phosphatase 1 regulatory subunit 9A located_in ISO (PMID:15996550) RGD
MGI		 PMID:15473970 PMID:15996550 RGD:10043779 NCBI chrNW_004936585:4,981,555...5,277,185 JBrowse link
G Ppp1r9b protein phosphatase 1 regulatory subunit 9B ISO RGD PMID:15135218 RGD:9999365 NCBI chrNW_004936490:11,497,389...11,514,191 JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:1,987,989...2,146,473
Ensembl chrNW_004936520:1,987,045...2,146,540 		JBrowse link
G Prkar2b protein kinase cAMP-dependent type II regulatory subunit beta located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:16,894,068...16,988,879
Ensembl chrNW_004936479:16,894,068...16,988,885 		JBrowse link
G Psd pleckstrin and Sec7 domain containing located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936600:3,449,240...3,464,938
Ensembl chrNW_004936600:3,449,786...3,467,451 		JBrowse link
G Ptchd1 patched domain containing 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936624:1,072,857...1,125,962
Ensembl chrNW_004936624:1,072,857...1,125,994 		JBrowse link
G Pten phosphatase and tensin homolog located_in ISO
IEA 		RGD
UniProt		 PMID:20628354 GO_REF:0000044 RGD:4144068 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323 		JBrowse link
G Ptpro protein tyrosine phosphatase receptor type O located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936587:1,967,079...2,188,651
Ensembl chrNW_004936587:1,964,665...2,188,672 		JBrowse link
G Ptprz1 protein tyrosine phosphatase receptor type Z1 ISO RGD PMID:15982644 RGD:9590117 NCBI chrNW_004936605:3,195,893...3,368,102
Ensembl chrNW_004936605:3,196,548...3,368,175 		JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor 4 ISO RGD PMID:19734897 RGD:2314692 NCBI chrNW_004936509:2,722,279...3,006,436
Ensembl chrNW_004936509:2,722,428...3,005,288 		JBrowse link
G Rgs10 regulator of G protein signaling 10 ISO RGD PMID:15593368 RGD:2303814 NCBI chrNW_004936486:8,867,327...8,904,161
Ensembl chrNW_004936486:8,866,474...8,904,744 		JBrowse link
G Rgs14 regulator of G protein signaling 14 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:1,650,480...1,658,823
Ensembl chrNW_004936597:1,643,616...1,658,638 		JBrowse link
G Rgs19 regulator of G protein signaling 19 located_in ISO (PMID:16819522) MGI PMID:16819522 NCBI chrNW_004936514:11,251,293...11,256,461
Ensembl chrNW_004936514:11,251,202...11,255,994 		JBrowse link
G Rhoa ras homolog family member A ISO MMO:0000686 RGD PMID:26738857 RGD:243048441 NCBI chrNW_004936529:1,000,050...1,045,655
Ensembl chrNW_004936529:999,935...1,045,681 		JBrowse link
G Rph3a rabphilin 3A located_in ISO PMID:26679993 UniProt PMID:26679993 RGD:11085451 NCBI chrNW_004936668:2,827,574...2,911,955
Ensembl chrNW_004936668:2,857,732...2,911,517 		JBrowse link
G Sez6 seizure related 6 homolog located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:5,145,504...5,191,008
Ensembl chrNW_004936538:5,144,134...5,191,046 		JBrowse link
G Shank1 SH3 and multiple ankyrin repeat domains 1 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936889:428,404...470,161
Ensembl chrNW_004936889:428,417...470,060 		JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936599:196,512...463,749
Ensembl chrNW_004936599:217,138...463,771 		JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936629:114,175...168,697
Ensembl chrNW_004936629:114,850...167,505 		JBrowse link
G Sipa1l1 signal induced proliferation associated 1 like 1 located_in ISO PMID:11502259 RGD
UniProt		 PMID:11502259 PMID:15703396 RGD:1600102 RGD:8554032 NCBI chrNW_004936488:819,503...1,175,043
Ensembl chrNW_004936488:860,129...1,175,051 		JBrowse link
G Slc1a1 solute carrier family 1 member 1 located_in ISO PMID:10701825
PMID:9542890 		ARUK-UCL PMID:9542890 PMID:10701825 RGD:21201260 RGD:21201279 NCBI chrNW_004936503:613,250...690,555
Ensembl chrNW_004936503:613,223...690,721 		JBrowse link
G Slc1a2 solute carrier family 1 member 2 ISO RGD PMID:11950769 RGD:727361 NCBI chrNW_004936533:2,779,650...2,918,640
Ensembl chrNW_004936533:2,779,518...2,918,298 		JBrowse link
G Slc1a3 solute carrier family 1 member 3 ISO RGD PMID:11950769 RGD:727361 NCBI chrNW_004936518:5,216,343...5,291,107
Ensembl chrNW_004936518:5,215,290...5,291,058 		JBrowse link
G Slc8a1 solute carrier family 8 member A1 ISO RGD PMID:16914199 RGD:2316976 NCBI chrNW_004936508:10,894,918...11,256,084
Ensembl chrNW_004936508:10,968,656...11,253,070 		JBrowse link
G Slc8a2 solute carrier family 8 member A2 ISO RGD PMID:16914199 RGD:2316976 NCBI chrNW_004936664:1,116,543...1,139,586
Ensembl chrNW_004936664:1,116,491...1,139,586 		JBrowse link
G Slc8a3 solute carrier family 8 member A3 ISO RGD PMID:16914199 RGD:2316976 NCBI chrNW_004936495:13,236,480...13,370,973
Ensembl chrNW_004936495:13,236,470...13,371,011 		JBrowse link
G Snx1 sorting nexin 1 located_in ISO (PMID:24261326) SynGO-UCL PMID:24261326 NCBI chrNW_004936471:24,569,677...24,617,016
Ensembl chrNW_004936471:24,569,609...24,619,826 		JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 is_active_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:6,096,258...6,338,024
Ensembl chrNW_004936557:6,096,246...6,338,108 		JBrowse link
G Strn striatin ISO RGD PMID:8769426 RGD:70027 NCBI chrNW_004936663:1,271,549...1,377,609
Ensembl chrNW_004936663:1,271,548...1,377,655 		JBrowse link
G Strn4 striatin 4 ISO RGD PMID:18466332 RGD:2311298 NCBI chrNW_004936664:553,682...574,240
Ensembl chrNW_004936664:553,878...570,732 		JBrowse link
G Stx4 syntaxin 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:13,401,095...13,408,316
Ensembl chrNW_004936501:13,401,989...13,408,325 		JBrowse link
G Syndig1 synapse differentiation inducing 1 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936620:1,165,312...1,359,127
Ensembl chrNW_004936620:1,165,709...1,359,179 		JBrowse link
G Syne1 spectrin repeat containing nuclear envelope protein 1 ISO RGD PMID:15541315 RGD:2314546 NCBI chrNW_004936489:4,903,176...5,177,987 JBrowse link
G Syt11 synaptotagmin 11 located_in ISO PMID:22960622 ParkinsonsUK-UCL PMID:22960622 RGD:11079184 NCBI chrNW_004936580:5,123,196...5,142,976
Ensembl chrNW_004936580:5,129,865...5,142,885 		JBrowse link
G Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936541:3,702,743...4,115,009
Ensembl chrNW_004936541:3,744,687...4,115,007 		JBrowse link
G Tenm2 teneurin transmembrane protein 2 located_in ISO PMID:21724987 UniProt PMID:21724987 RGD:8553824 NCBI chrNW_004936622:1,101,587...1,983,816
Ensembl chrNW_004936622:1,102,963...1,983,751 		JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 ISO RGD PMID:16474385 RGD:10043325 NCBI chrNW_004936500:10,451,599...10,812,239
Ensembl chrNW_004936500:10,688,236...10,812,192 		JBrowse link
G Zdhhc12 zDHHC palmitoyltransferase 12 is_active_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:16,201,288...16,203,818
Ensembl chrNW_004936487:16,199,742...16,203,858 		JBrowse link
G Zmynd8 zinc finger MYND-type containing 8 ISO RGD PMID:24117785 RGD:8554267 NCBI chrNW_004936514:6,116,789...6,214,383
Ensembl chrNW_004936514:6,116,676...6,212,996 		JBrowse link
G Znf804a zinc finger protein 804A located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936506:12,164,004...12,450,483
Ensembl chrNW_004936506:12,164,469...12,167,690 		JBrowse link
cytoplasmic side of dendritic spine plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp1r9b protein phosphatase 1 regulatory subunit 9B ISO RGD PMID:9275233 RGD:625590 NCBI chrNW_004936490:11,497,389...11,514,191 JBrowse link
dendritic spine cytoplasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baiap2 BAR/IMD domain containing adaptor protein 2 ISO RGD PMID:15673667 RGD:9684988 NCBI chrNW_004936594:4,797,068...4,863,409
Ensembl chrNW_004936594:4,797,018...4,865,327 		JBrowse link
dendritic spine head term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 ISO RGD PMID:21809413 RGD:7248609 NCBI chrNW_004936706:476,473...494,659
Ensembl chrNW_004936706:477,107...495,525 		JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S ISO MMO:0000686 RGD PMID:24519419 RGD:11340724 NCBI chrNW_004936567:3,269,283...3,331,858
Ensembl chrNW_004936567:3,269,355...3,331,460 		JBrowse link
G Dnm3 dynamin 3 ISO RGD PMID:17880892 RGD:8553820 NCBI chrNW_004936481:14,971,977...15,411,253
Ensembl chrNW_004936481:14,971,947...15,411,288 		JBrowse link
G Drd1 dopamine receptor D1 ISO RGD PMID:21809413 RGD:7248609 NCBI chrNW_004936609:790,647...795,187
Ensembl chrNW_004936609:792,276...793,613 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 ISO RGD PMID:15028757 RGD:1300188 NCBI chrNW_004936513:1,290,038...1,327,850
Ensembl chrNW_004936513:1,289,558...1,327,856 		JBrowse link
G Fus FUS RNA binding protein ISO RGD PMID:15843054 RGD:9685711 NCBI chrNW_004936501:13,529,732...13,541,102
Ensembl chrNW_004936501:13,529,803...13,540,764 		JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 located_in ISO PMID:22919059 UniProt PMID:22919059 RGD:8553395 NCBI chrNW_004936754:1,288,891...1,293,555
Ensembl chrNW_004936754:1,288,912...1,293,427 		JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 ISO MMO:0000538 RGD PMID:11007883 PMID:11978826 RGD:5688258 RGD:625696 NCBI chrNW_004936576:3,800,369...3,940,324
Ensembl chrNW_004936576:3,800,075...3,941,003 		JBrowse link
G Grip1 glutamate receptor interacting protein 1 ISO MMO:0000538 RGD PMID:11007883 RGD:5688258 NCBI chrNW_004936545:4,353,056...4,606,196
Ensembl chrNW_004936545:4,353,040...5,002,725 		JBrowse link
G Hpca hippocalcin ISO RGD PMID:20704590 RGD:9686447 NCBI chrNW_004936474:15,786,171...15,794,830
Ensembl chrNW_004936474:15,785,879...15,798,740 		JBrowse link
G Nrgn neurogranin ISO RGD PMID:8891262 RGD:9835422 NCBI chrNW_004936743:1,191,716...1,199,108
Ensembl chrNW_004936743:1,196,433...1,197,610 		JBrowse link
G Ppp1r1b protein phosphatase 1 regulatory inhibitor subunit 1B ISO RGD PMID:24058659 RGD:13515074 NCBI chrNW_004936490:14,822,246...14,831,337
Ensembl chrNW_004936490:14,822,213...14,831,349 		JBrowse link
G Ppp1r9b protein phosphatase 1 regulatory subunit 9B ISO RGD PMID:9275233 RGD:625590 NCBI chrNW_004936490:11,497,389...11,514,191 JBrowse link
G Rgs7bp regulator of G protein signaling 7 binding protein ISO RGD PMID:18248908 RGD:13524856 NCBI chrNW_004936480:4,466,355...4,565,322
Ensembl chrNW_004936480:4,470,819...4,565,069 		JBrowse link
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:6,096,258...6,338,024
Ensembl chrNW_004936557:6,096,246...6,338,108 		JBrowse link
G Syne1 spectrin repeat containing nuclear envelope protein 1 ISO RGD PMID:24191017 RGD:13209020 NCBI chrNW_004936489:4,903,176...5,177,987 JBrowse link
dendritic spine membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap5 A-kinase anchoring protein 5 ISO RGD PMID:12177200 RGD:2313249 NCBI chrNW_004936495:8,173,521...8,179,249
Ensembl chrNW_004936495:8,176,249...8,177,556 		JBrowse link
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 ISO RGD PMID:20575074 RGD:7205679 NCBI chrNW_004936507:6,525,302...6,631,003
Ensembl chrNW_004936507:6,523,199...6,630,606 		JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 located_in ISO PMID:17183553 UniProt PMID:17183553 RGD:13702242 NCBI chrNW_004936602:2,744,757...3,011,051
Ensembl chrNW_004936602:2,744,759...3,007,940 		JBrowse link
G Atp6ap2 ATPase H+ transporting accessory protein 2 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936502:7,206,226...7,232,798
Ensembl chrNW_004936502:7,206,172...7,233,912 		JBrowse link
G Clcn2 chloride voltage-gated channel 2 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936578:5,525,461...5,539,351
Ensembl chrNW_004936578:5,525,601...5,539,472 		JBrowse link
G Dagla diacylglycerol lipase alpha located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:1,371,292...1,430,699
Ensembl chrNW_004936581:1,371,262...1,430,801 		JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936754:1,288,891...1,293,555
Ensembl chrNW_004936754:1,288,912...1,293,427 		JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 located_in
is_active_in 		IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:8,937,391...9,236,438
Ensembl chrNW_004936515:8,940,009...9,083,151 		JBrowse link
G Itga8 integrin subunit alpha 8 ISO RGD PMID:8797161 RGD:2302242 NCBI chrNW_004936574:5,985,181...6,155,067
Ensembl chrNW_004936574:5,984,939...6,155,164 		JBrowse link
G Palm paralemmin located_in ISO PMID:16847661 UniProt PMID:16847661 RGD:8554086 NCBI chrNW_004936588:270,431...283,925
Ensembl chrNW_004936588:270,425...283,974 		JBrowse link
G Ppp1r9b protein phosphatase 1 regulatory subunit 9B ISO RGD PMID:9275233 RGD:625590 NCBI chrNW_004936490:11,497,389...11,514,191 JBrowse link
G Shisa6 shisa family member 6 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936595:3,973,099...4,152,706
Ensembl chrNW_004936595:4,026,604...4,304,857 		JBrowse link
G Shisa7 shisa family member 7 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936886:664,075...675,008
Ensembl chrNW_004936886:664,052...682,618 		JBrowse link
G Shisa8 shisa family member 8 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936492:108,751...113,765
Ensembl chrNW_004936492:108,750...113,781 		JBrowse link
G Shisa9 shisa family member 9 located_in IEA Ensembl
UniProt
TreeGrafter		 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:1,491,869...1,738,118
Ensembl chrNW_004936501:1,494,885...1,737,439 		JBrowse link
G Trpv1 transient receptor potential cation channel subfamily V member 1 located_in IEA UniProt GO_REF:0000044 NCBI chrNW_004936677:277,304...326,907
Ensembl chrNW_004936677:276,994...327,025 		JBrowse link
dendritic spine neck term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 ISO RGD PMID:21809413 RGD:7248609 NCBI chrNW_004936706:476,473...494,659
Ensembl chrNW_004936706:477,107...495,525 		JBrowse link
G Drd1 dopamine receptor D1 ISO RGD PMID:21809413 RGD:7248609 NCBI chrNW_004936609:790,647...795,187
Ensembl chrNW_004936609:792,276...793,613 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 ISO RGD PMID:15028757 RGD:1300188 NCBI chrNW_004936513:1,290,038...1,327,850
Ensembl chrNW_004936513:1,289,558...1,327,856 		JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 ISO MMO:0000538 RGD PMID:11007883 RGD:5688258 NCBI chrNW_004936576:3,800,369...3,940,324
Ensembl chrNW_004936576:3,800,075...3,941,003 		JBrowse link
G Grip1 glutamate receptor interacting protein 1 ISO MMO:0000538 RGD PMID:11007883 RGD:5688258 NCBI chrNW_004936545:4,353,056...4,606,196
Ensembl chrNW_004936545:4,353,040...5,002,725 		JBrowse link
G Ppp1r1b protein phosphatase 1 regulatory inhibitor subunit 1B ISO RGD PMID:24058659 RGD:13515074 NCBI chrNW_004936490:14,822,246...14,831,337
Ensembl chrNW_004936490:14,822,213...14,831,349 		JBrowse link
G Ppp1r9a protein phosphatase 1 regulatory subunit 9A ISO RGD PMID:15473970 RGD:10043779 NCBI chrNW_004936585:4,981,555...5,277,185 JBrowse link
G Ppp1r9b protein phosphatase 1 regulatory subunit 9B ISO RGD PMID:9275233 RGD:625590 NCBI chrNW_004936490:11,497,389...11,514,191 JBrowse link
G Sri sorcin ISO RGD PMID:10188938 RGD:7327208 NCBI chrNW_004936763:715,884...728,548
Ensembl chrNW_004936763:710,777...730,276 		JBrowse link
spine apparatus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplp2 amyloid beta precursor like protein 2 is_active_in ISO (PMID:28450540) SynGO PMID:28450540 NCBI chrNW_004936572:2,205,527...2,277,786
Ensembl chrNW_004936572:2,205,478...2,277,842 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 ISO RGD PMID:9030614 RGD:11041080 NCBI chrNW_004936513:1,290,038...1,327,850
Ensembl chrNW_004936513:1,289,558...1,327,856 		JBrowse link
G Oprd1 opioid receptor delta 1 is_active_in ISO PMID:11312309 SynGO PMID:11312309 RGD:13702315 NCBI chrNW_004936474:12,860,293...12,902,389
Ensembl chrNW_004936474:12,860,293...12,903,466 		JBrowse link
G Oprm1 opioid receptor mu 1 is_active_in ISO PMID:11312309 SynGO PMID:11312309 RGD:13702315 NCBI chrNW_004936489:6,506,207...6,567,136
Ensembl chrNW_004936489:6,506,207...6,548,946 		JBrowse link
G Ppfia1 PTPRF interacting protein alpha 1 is_active_in ISO PMID:17419996 SynGO PMID:17419996 RGD:14696670 NCBI chrNW_004936599:523,534...609,782
Ensembl chrNW_004936599:523,507...610,065 		JBrowse link
G Ppp1r9b protein phosphatase 1 regulatory subunit 9B is_active_in ISO PMID:9275233 SynGO PMID:9275233 RGD:625590 NCBI chrNW_004936490:11,497,389...11,514,191 JBrowse link
G Synpo synaptopodin is_active_in
located_in 		ISO
IEA 		PMID:10701442 SynGO
TreeGrafter		 PMID:10701442 GO_REF:0000118 RGD:13702235 NCBI chrNW_004936504:4,321,985...4,358,757
Ensembl chrNW_004936504:4,321,962...4,358,294 		JBrowse link
spine apparatus membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit is_active_in ISO PMID:11588172 SynGO PMID:11588172 RGD:13702268 NCBI chrNW_004937351:32,324...46,871
Ensembl chrNW_004937351:34,921...47,246 		JBrowse link
G LOC101965661 beta-catenin-interacting protein 1 is_active_in ISO PMID:11161476 SynGO PMID:11161476 RGD:13702439 NCBI chrNW_004936623:3,696,686...3,729,017
Ensembl chrNW_004936623:3,782,005...3,806,619
Ensembl chrNW_004936623:3,782,005...3,806,619 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18226
    cellular anatomical structure 18004
      postsynapse 1015
        dendritic spine 217
          cytoskeleton of dendritic spine + 0
          dendritic spine cytoplasm 1
          dendritic spine head 16
          dendritic spine membrane + 16
          dendritic spine neck + 9
          spine apparatus + 9
          thorny excrescence 0
Path 2
Term Annotations click to browse term
  cellular_component 18226
    cellular anatomical structure 18004
      cell projection 2557
        plasma membrane bounded cell projection 2500
          neuron projection 1473
            dendritic tree 768
              dendrite 766
                dendritic spine 217
                  cytoskeleton of dendritic spine + 0
                  dendritic spine cytoplasm 1
                  dendritic spine head 16
                  dendritic spine membrane + 16
                  dendritic spine neck + 9
                  spine apparatus + 9
                  thorny excrescence 0
paths to the root