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ONTOLOGY REPORT - ANNOTATIONS


Term:dendritic spine
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Accession:GO:0043197 term browser browse the term
Definition:A small, membranous protrusion from a dendrite that forms a postsynaptic compartment - typically receiving input from a single presynapse. They function as partially isolated biochemical and an electrical compartments. Spine morphology is variable including 'thin', 'stubby', 'mushroom', and 'branched', with a continuum of intermediate morphologies. They typically terminate in a bulb shape, linked to the dendritic shaft by a restriction. Spine remodeling is though to be involved in synaptic plasticity.
Synonyms:exact_synonym: dendrite spine
 narrow_synonym: branched dendritic spine;   mushroom dendritic spine;   sessile dendritic spine;   stubby dendritic spine;   thin dendritic spine
 xref: NIF_Subcellular:sao1799103720;   Wikipedia:Dendritic_spine


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dendritic spine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abhd17a abhydrolase domain containing 17A JBrowse link 7 11,992,543 12,000,978 RGD:1600115
G Abhd17b abhydrolase domain containing 17B JBrowse link 1 239,266,140 239,301,133 RGD:1600115
G Abhd17c abhydrolase domain containing 17C JBrowse link 1 146,248,505 146,289,465 RGD:1600115
G Abi2 abl-interactor 2 JBrowse link 9 67,234,612 67,284,504 RGD:1624291
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase JBrowse link 13 74,154,533 74,333,244 RGD:1624291
G Abr ABR activator of RhoGEF and GTPase JBrowse link 10 64,565,121 64,657,079 RGD:1600115
G Actn1 actinin, alpha 1 JBrowse link 6 103,376,557 103,470,497 RGD:8554161
G Adam10 ADAM metallopeptidase domain 10 JBrowse link 8 77,107,355 77,237,483 RGD:12907557
G Add1 adducin 1 JBrowse link 14 81,367,466 81,426,610 RGD:1624954
G Adgrb1 adhesion G protein-coupled receptor B1 JBrowse link 7 115,766,484 115,828,514 RGD:1600115
G Adora1 adenosine A1 receptor JBrowse link 13 51,042,111 51,076,913 RGD:1624291
RGD:1600115
G Adrb2 adrenoceptor beta 2 JBrowse link 18 57,513,792 57,515,834 RGD:1598758
G Akap5 A-kinase anchoring protein 5 JBrowse link 6 99,356,509 99,361,909 RGD:2312610
RGD:13792537
G Als2 alsin Rho guanine nucleotide exchange factor ALS2 JBrowse link 9 65,961,361 66,034,396 RGD:1624291
RGD:1600115
G Anks1b ankyrin repeat and sterile alpha motif domain containing 1B JBrowse link 7 30,507,135 31,684,604 RGD:1600115
G Apba1 amyloid beta precursor protein binding family A member 1 JBrowse link 1 241,594,565 241,796,512 RGD:10047276
RGD:13792537
G Apba2 amyloid beta precursor protein binding family A member 2 JBrowse link 1 125,367,273 125,547,741 RGD:13792537
G Apba3 amyloid beta precursor protein binding family A member 3 JBrowse link 7 11,314,468 11,319,540 RGD:13792537
G Apbb1 amyloid beta precursor protein binding family B member 1 JBrowse link 1 170,387,625 170,411,263 RGD:2301201
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:1624291
RGD:1600115
G Arc activity-regulated cytoskeleton-associated protein JBrowse link 7 115,907,097 115,911,059 RGD:1600115
RGD:1624291
G Arf4 ADP-ribosylation factor 4 JBrowse link 16 2,338,333 2,354,909 RGD:1624291
RGD:1600115
G Arfgef2 ADP ribosylation factor guanine nucleotide exchange factor 2 JBrowse link 3 163,570,435 163,656,612 RGD:1304338
G Arhgap33 Rho GTPase activating protein 33 JBrowse link 1 88,977,460 88,990,780 RGD:13508596
G Arhgap44 Rho GTPase activating protein 44 JBrowse link 10 51,501,547 51,669,546 RGD:1600115
RGD:13792537
RGD:1624291
G Arpc2 actin related protein 2/3 complex, subunit 2 JBrowse link 9 81,518,163 81,548,871 RGD:11530067
G Arrb1 arrestin, beta 1 JBrowse link 1 164,502,099 164,573,947 RGD:631708
G Arrb2 arrestin, beta 2 JBrowse link 10 57,040,252 57,048,045 RGD:631708
G Asap1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 JBrowse link 7 104,670,076 104,951,090 RGD:1624291
RGD:1600115
G Asic2 acid sensing ion channel subunit 2 JBrowse link 10 68,247,800 69,347,223 RGD:1624291
RGD:1600115
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 JBrowse link 13 90,651,682 90,676,629 RGD:727361
G Baiap2 BAR/IMD domain containing adaptor protein 2 JBrowse link 10 109,107,326 109,187,458 RGD:9684984
G Bcr BCR activator of RhoGEF and GTPase JBrowse link 20 14,421,250 14,546,406 RGD:1600115
G Calb1 calbindin 1 JBrowse link 5 29,538,380 29,562,774 RGD:12050144
RGD:13792537
G Cald1 caldesmon 1 JBrowse link 4 62,103,948 62,291,375 RGD:2303067
RGD:2303068
G Camk2a calcium/calmodulin-dependent protein kinase II alpha JBrowse link 18 56,193,978 56,295,869 RGD:1600115
RGD:1624291
G Canx calnexin JBrowse link 10 35,800,942 35,833,939 RGD:2313162
G Capzb capping actin protein of muscle Z-line subunit beta JBrowse link 5 157,642,742 157,742,487 RGD:9685031
G Cd3e CD3e molecule JBrowse link 8 49,297,604 49,309,370 RGD:1624291
RGD:1600115
G Cdc42 cell division cycle 42 JBrowse link 5 155,690,267 155,728,385 RGD:1624291
RGD:13792537
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 JBrowse link 10 67,862,054 67,863,255 RGD:8554161
G Cfl1 cofilin 1 JBrowse link 1 220,869,805 220,873,337 RGD:11570414
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit JBrowse link 1 123,897,341 124,039,263 RGD:1600985
G Cnih2 cornichon family AMPA receptor auxiliary protein 2 JBrowse link 1 220,474,485 220,480,723 RGD:1624291
RGD:1600115
G Cnn3 calponin 3 JBrowse link 2 225,005,069 225,036,179 RGD:2303067
RGD:2303068
G Comt catechol-O-methyltransferase JBrowse link 11 86,715,981 86,735,630 RGD:8662339
G Crhr1 corticotropin releasing hormone receptor 1 JBrowse link 10 92,191,473 92,233,662 RGD:1626245
G Cript CXXC repeat containing interactor of PDZ3 domain JBrowse link 6 10,594,147 10,602,103 RGD:632510
G Cryab crystallin, alpha B JBrowse link 8 55,178,543 55,182,546 RGD:10402750
G Ctnnd1 catenin delta 1 JBrowse link 3 72,001,904 72,053,047 RGD:2316208
G Cttn cortactin JBrowse link 1
1
217,602,698
215,255,385
217,638,196
215,290,882
RGD:1600115
G Cttnbp2 cortactin binding protein 2 JBrowse link 4 42,932,897 43,096,454 RGD:1600115
G Cyfip1 cytoplasmic FMR1 interacting protein 1 JBrowse link 1 114,258,773 114,347,138 RGD:11568064
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 JBrowse link 8 58,744,849 58,772,408 RGD:1600839
G Dbn1 drebrin 1 JBrowse link 17 9,679,511 9,693,878 RGD:10398728
G Ddn dendrin JBrowse link 7 140,479,707 140,486,093 RGD:1300452
RGD:1300453
G Dgki diacylglycerol kinase, iota JBrowse link 4 64,365,115 64,831,473 RGD:1624291
RGD:1600115
G Dlg4 discs large MAGUK scaffold protein 4 JBrowse link 10 56,625,845 56,655,543 RGD:1624291
RGD:14995321
RGD:11085451
RGD:1600115
G Dlgap2 DLG associated protein 2 JBrowse link 16 79,872,238 80,596,977 RGD:13508596
G Dlgap3 DLG associated protein 3 JBrowse link 5 145,234,757 145,304,536 RGD:1302351
G Dnajb1 DnaJ heat shock protein family (Hsp40) member B1 JBrowse link 19 24,747,178 24,750,919 RGD:10059325
G Dnm1 dynamin 1 JBrowse link 3 11,338,081 11,382,043 RGD:13792537
G Dnm2 dynamin 2 JBrowse link 8 22,458,869 22,540,649 RGD:13792537
G Dnm3 dynamin 3 JBrowse link 13 79,906,711 80,379,967 RGD:8553820
RGD:13792537
G Dock10 dedicator of cytokinesis 10 JBrowse link 9
9
86,424,638
86,312,470
86,571,854
86,423,054
RGD:1624291
G Drd1 dopamine receptor D1 JBrowse link 17 11,099,736 11,104,352 RGD:70242
RGD:1624291
RGD:1600115
G Drd2 dopamine receptor D2 JBrowse link 8 53,678,777 53,743,643 RGD:2311574
G Drd4 dopamine receptor D4 JBrowse link 1 214,278,296 214,282,818 RGD:1625058
G Drd5 dopamine receptor D5 JBrowse link 14 77,220,579 77,222,006 RGD:5686425
G Dtnbp1 dystrobrevin binding protein 1 JBrowse link 17 20,090,136 20,182,332 RGD:11251757
RGD:1600115
RGD:1624291
G Dvl1 dishevelled segment polarity protein 1 JBrowse link 5 173,295,948 173,308,014 RGD:10449514
G Eef2k eukaryotic elongation factor-2 kinase JBrowse link 1 190,780,211 190,839,926 RGD:10401640
G Epha1 Eph receptor A1 JBrowse link 4 71,749,100 71,763,681 RGD:13792537
G Epha4 Eph receptor A4 JBrowse link 9 83,111,222 83,253,486 RGD:5688744
RGD:13792537
RGD:12911004
G Espn espin JBrowse link 5 169,293,356 169,331,338 RGD:1600115
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 JBrowse link 15 106,375,298 106,625,837 RGD:1600115
G Fbxo2 F-box protein 2 JBrowse link 5 164,972,483 164,977,912 RGD:1624291
RGD:1600115
G Fcgr2b Fc fragment of IgG receptor IIb JBrowse link 13 89,329,298 89,343,916 RGD:1624291
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:11041080
RGD:13792537
RGD:1624291
RGD:11059594
G Frmpd4 FERM and PDZ domain containing 4 JBrowse link X 27,231,648 28,206,890 RGD:1624291
RGD:13792537
G Fus FUS RNA binding protein JBrowse link 1 199,412,805 199,426,705 RGD:9685711
G Fxr1 FMR1 autosomal homolog 1 JBrowse link 2 120,529,716 120,570,356 RGD:1624291
RGD:1600115
RGD:13792537
G Fxr2 FMR1 autosomal homolog 2 JBrowse link 10 56,237,814 56,257,877 RGD:13792537
G Gabbr1 gamma-aminobutyric acid type B receptor subunit 1 JBrowse link 20 1,955,344 1,984,907 RGD:2315473
G Gipc1 GIPC PDZ domain containing family, member 1 JBrowse link 19 24,786,604 24,798,231 RGD:1624291
RGD:1600115
G Gpm6a glycoprotein m6a JBrowse link 16 39,367,697 39,719,292 RGD:1600115
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 JBrowse link 10 42,441,723 42,760,200 RGD:1600985
RGD:13792537
RGD:1624291
RGD:12907563
RGD:2312658
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 JBrowse link 2 179,584,302 179,704,629 RGD:1600985
RGD:13792537
RGD:8553683
RGD:1642304
G Gria3 glutamate ionotropic receptor AMPA type subunit 3 JBrowse link X 127,561,843 127,829,763 RGD:1600985
RGD:13792537
RGD:8553683
RGD:1642304
G Gria4 glutamate ionotropic receptor AMPA type subunit 4 JBrowse link 8 1,548,145 2,045,874 RGD:12907563
RGD:13792537
G Grid2 glutamate ionotropic receptor delta type subunit 2 JBrowse link 4 94,068,112 95,476,864 RGD:1624291
RGD:1600115
G Grid2ip Grid2 interacting protein JBrowse link 12 13,221,334 13,257,365 RGD:1624291
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 JBrowse link 3 2,507,745 2,534,664 RGD:1642304
RGD:1600115
RGD:1624291
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A JBrowse link 10 5,707,806 6,123,568 RGD:8554784
RGD:11085451
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B JBrowse link 4 169,541,620 170,000,216 RGD:1642304
G Grip2 glutamate receptor interacting protein 2 JBrowse link 4 123,585,184 123,636,040 RGD:1600115
G Grk2 G protein-coupled receptor kinase 2 JBrowse link 1 219,536,220 219,544,329 RGD:632163
G Grk3 G protein-coupled receptor kinase 3 JBrowse link 12 49,626,871 49,750,389 RGD:632163
G Grm1 glutamate metabotropic receptor 1 JBrowse link 1 4,753,141 5,165,859 RGD:2303068
G Grm3 glutamate metabotropic receptor 3 JBrowse link 4 21,316,761 21,567,561 RGD:1600115
RGD:1624291
G Grm5 glutamate metabotropic receptor 5 JBrowse link 1 151,207,846 151,785,038 RGD:2303068
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 11 65,060,884 65,208,842 RGD:1641844
G Hap1 huntingtin-associated protein 1 JBrowse link 10 88,257,975 88,266,210 RGD:1600115
G Hnrnpk heterogeneous nuclear ribonucleoprotein K JBrowse link 17 6,664,730 6,676,753 RGD:10002784
G Homer1 homer scaffold protein 1 JBrowse link 2 22,909,550 23,012,303 RGD:1600115
RGD:14995321
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:10059401
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 JBrowse link 10 83,774,178 83,823,323 RGD:1600115
G Itgb1 integrin subunit beta 1 JBrowse link 19 61,677,512 61,725,537 RGD:1624291
RGD:12050116
RGD:1600115
G Itpka inositol-trisphosphate 3-kinase A JBrowse link 3 111,545,007 111,553,605 RGD:8553536
G Itsn1 intersectin 1 JBrowse link 11 31,943,119 32,069,249 RGD:13461864
G Kcna4 potassium voltage-gated channel subfamily A member 4 JBrowse link 3 98,293,295 98,300,763 RGD:12907553
RGD:13792537
G Kcnd2 potassium voltage-gated channel subfamily D member 2 JBrowse link 4 48,309,283 48,816,804 RGD:1581430
RGD:13792537
RGD:10047325
RGD:1624291
G Kcnj2 potassium inwardly-rectifying channel, subfamily J, member 2 JBrowse link 10 99,429,337 99,442,520 RGD:7247433
G Kcnn1 potassium calcium-activated channel subfamily N member 1 JBrowse link 16 20,325,270 20,349,163 RGD:13792537
G Kcnn2 potassium calcium-activated channel subfamily N member 2 JBrowse link 18 39,331,894 39,479,574 RGD:7205439
RGD:13792537
RGD:1624291
G Lama2 laminin subunit alpha 2 JBrowse link 1 18,491,264 19,143,486 RGD:1600208
G LOC103690160 SH3 and multiple ankyrin repeat domains protein 2-like JBrowse link 1 215,208,591 215,246,638 RGD:13792537
G Lpar1 lysophosphatidic acid receptor 1 JBrowse link 5 75,557,038 75,678,067 RGD:2317707
G Lrrc4 leucine rich repeat containing 4 JBrowse link 4 56,110,658 56,114,254 RGD:1624291
RGD:1600115
G Lrrc7 leucine rich repeat containing 7 JBrowse link 2 264,910,594 265,300,860 RGD:1299511
G Lzts1 leucine zipper tumor suppressor 1 JBrowse link 16 22,250,452 22,306,667 RGD:1299532
RGD:1600102
G Lzts3 leucine zipper tumor suppressor family member 3 JBrowse link 3 123,174,444 123,185,649 RGD:8553782
G Map1b microtubule-associated protein 1B JBrowse link 2 29,675,391 29,768,750 RGD:1600115
G Marcks myristoylated alanine rich protein kinase C substrate JBrowse link 20 42,966,140 42,971,838 RGD:9685308
G Mob4 MOB family member 4, phocein JBrowse link 9 61,720,583 61,744,532 RGD:633583
G Mpp2 membrane palmitoylated protein 2 JBrowse link 10 89,998,284 90,030,766 RGD:1624291
G Mt3 metallothionein 3 JBrowse link 19 11,324,708 11,326,112 RGD:9685810
G Mtmr2 myotubularin related protein 2 JBrowse link 8 12,283,471 12,334,014 RGD:8553482
G Mx1 myxovirus (influenza virus) resistance 1 JBrowse link 11 37,891,150 37,916,775 RGD:13792537
G Mx2 MX dynamin like GTPase 2 JBrowse link 11 38,035,306 38,066,185 RGD:13792537
G Myh10 myosin heavy chain 10 JBrowse link 10 55,274,910 55,406,738 RGD:1624291
RGD:1600115
G Myl7 myosin light chain 7 JBrowse link 14 86,144,770 86,147,075 RGD:1624291
RGD:1600115
G Mylk2 myosin light chain kinase 2 JBrowse link 3 148,386,185 148,397,851 RGD:1600505
G Myo5b myosin Vb JBrowse link 18 70,426,865 70,729,985 RGD:2312658
G Ncoa2 nuclear receptor coactivator 2 JBrowse link 5 5,466,544 5,696,540 RGD:5688258
G Nedd4 NEDD4 E3 ubiquitin protein ligase JBrowse link 8 79,323,408 79,408,842 RGD:1600115
RGD:13792537
RGD:1624291
G Neurl1 neuralized E3 ubiquitin protein ligase 1 JBrowse link 1 266,953,006 267,038,879 RGD:1624291
RGD:1600115
G Ngfr nerve growth factor receptor JBrowse link 10 83,389,828 83,408,061 RGD:1600115
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:10047210
G Nos1 nitric oxide synthase 1 JBrowse link 12 44,214,949 44,405,530 RGD:1600115
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 JBrowse link 10 86,683,875 86,690,815 RGD:1600115
RGD:1624291
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 JBrowse link 18 31,728,373 32,704,022 RGD:4892203
G Nsmf NMDA receptor synaptonuclear signaling and neuronal migration factor JBrowse link 3 2,262,173 2,270,996 RGD:8553324
G Ntrk2 neurotrophic receptor tyrosine kinase 2 JBrowse link 17 5,934,651 6,245,778 RGD:2303068
RGD:13792537
RGD:12050128
G Ntsr1 neurotensin receptor 1 JBrowse link 3 175,982,313 176,046,345 RGD:9831116
G Ophn1 oligophrenin 1 JBrowse link X 68,185,865 68,579,518 RGD:1624291
RGD:13792537
G P2rx2 purinergic receptor P2X 2 JBrowse link 12 52,397,666 52,401,005 RGD:1642669
G P2rx3 purinergic receptor P2X 3 JBrowse link 3 72,403,992 72,447,801 RGD:1642677
G P2rx4 purinergic receptor P2X 4 JBrowse link 12 39,308,022 39,325,673 RGD:1642669
G P2rx6 purinergic receptor P2X 6 JBrowse link 11 87,434,929 87,445,221 RGD:1642669
G Palmd palmdelphin JBrowse link 2 220,481,292 220,536,004 RGD:8554800
G Pde4b phosphodiesterase 4B JBrowse link 5 121,759,236 122,136,814 RGD:1624291
RGD:1600115
G Pdlim4 PDZ and LIM domain 4 JBrowse link 10 39,390,578 39,405,322 RGD:13432260
G Pgr progesterone receptor JBrowse link 8 7,128,656 7,187,796 RGD:7248705
G Ppfia2 PTPRF interacting protein alpha 2 JBrowse link 7 48,548,932 49,045,852 RGD:1624291
RGD:1600115
G Ppp1ca protein phosphatase 1 catalytic subunit alpha JBrowse link 1 219,439,953 219,443,570 RGD:2306152
G Ppp1cc protein phosphatase 1 catalytic subunit gamma JBrowse link 12 39,864,302 39,882,030 RGD:2306152
G Ppp1r2 protein phosphatase 1, regulatory (inhibitor) subunit 2 JBrowse link 11 72,748,789 73,034,683 RGD:1299366
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A JBrowse link 4 29,976,485 30,247,371 RGD:1624291
RGD:10043779
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B JBrowse link 10 82,800,704 82,816,735 RGD:9999365
G Ppp3ca protein phosphatase 3 catalytic subunit alpha JBrowse link 2 241,909,332 242,186,861 RGD:1624291
RGD:1600115
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link 19 25,095,089 25,118,869 RGD:1600115
RGD:1624291
G Prkar2b protein kinase cAMP-dependent type II regulatory subunit beta JBrowse link 6 51,265,509 51,356,383 RGD:1624291
RGD:1600115
G Prrt2 proline-rich transmembrane protein 2 JBrowse link 1 198,451,042 198,454,998 RGD:1600115
G Psd pleckstrin and Sec7 domain containing JBrowse link 1 266,059,331 266,074,774 RGD:1624291
RGD:1600115
G Psmc2 proteasome 26S subunit, ATPase 2 JBrowse link 4 9,867,132 9,881,383 RGD:12050100
RGD:13792537
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:4144068
G Ptk2 protein tyrosine kinase 2 JBrowse link 7 114,436,419 114,611,317 RGD:12050116
RGD:13792537
G Ptk2b protein tyrosine kinase 2 beta JBrowse link 15 42,827,306 42,947,796 RGD:12050116
RGD:13792537
G Ptpro protein tyrosine phosphatase, receptor type, O JBrowse link 4 171,250,766 171,461,571 RGD:1624291
RGD:1600115
G Ptprz1 protein tyrosine phosphatase, receptor type Z1 JBrowse link 4 49,941,046 50,140,764 RGD:9590117
G Rab8a RAB8A, member RAS oncogene family JBrowse link 16 19,355,047 19,376,776 RGD:2306456
RGD:13792537
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:1624291
RGD:13792537
RGD:12050102
G Rapgef4 Rap guanine nucleotide exchange factor 4 JBrowse link 3 58,632,338 58,925,127 RGD:2314692
G Rgs10 regulator of G-protein signaling 10 JBrowse link 1 199,782,076 199,823,440 RGD:2303814
G Rgs14 regulator of G-protein signaling 14 JBrowse link 17 9,777,925 9,792,007 RGD:1624291
RGD:1600115
G Rhoa ras homolog family member A JBrowse link 8 117,082,440 117,116,244 RGD:1624291
RGD:13792537
G Rph3a rabphilin 3A JBrowse link 12 41,073,296 41,149,799 RGD:11085451
G RSA-14-44 RSA-14-44 protein JBrowse link 4 96,831,880 96,833,252 RGD:13792537
G Septin11 septin 11 JBrowse link 14 16,369,544 16,405,645 RGD:1600115
G Sez6 seizure related 6 homolog JBrowse link 10 64,865,802 64,915,461 RGD:1624291
RGD:1600115
G Shank1 SH3 and multiple ankyrin repeat domains 1 JBrowse link 1 100,297,137 100,344,377 RGD:8553458
RGD:13792537
RGD:1624291
G Shank2 SH3 and multiple ankyrin repeat domains 2 JBrowse link 1 217,149,156 217,593,950 RGD:1624291
RGD:13792537
RGD:1600115
G Shank3 SH3 and multiple ankyrin repeat domains 3 JBrowse link 7 130,474,278 130,534,679 RGD:13792537
G Sipa1l1 signal-induced proliferation-associated 1 like 1 JBrowse link 6 106,052,212 106,163,249 RGD:1600102
RGD:8554032
G Slc1a2 solute carrier family 1 member 2 JBrowse link 3 92,518,679 92,665,731 RGD:727361
G Slc1a3 solute carrier family 1 member 3 JBrowse link 2 57,860,881 57,935,363 RGD:727361
G Slc8a1 solute carrier family 8 member A1 JBrowse link 6 4,244,076 4,564,262 RGD:2316976
G Slc8a2 solute carrier family 8 member A2 JBrowse link 1 78,029,555 78,054,042 RGD:2316976
G Slc8a3 solute carrier family 8 member A3 JBrowse link 6 104,889,500 105,099,408 RGD:2316976
G Snx1 sorting nexin 1 JBrowse link 8 71,745,687 71,786,182 RGD:1624291
G Strn striatin JBrowse link 6 1,232,729 1,319,603 RGD:70027
G Strn4 striatin 4 JBrowse link 1 78,739,930 78,765,696 RGD:2311298
G Stx4 syntaxin 4 JBrowse link 1 199,287,384 199,295,606 RGD:1600115
RGD:1624291
G Syndig1 synapse differentiation inducing 1 JBrowse link 3 145,031,427 145,199,273 RGD:8554654
G Syne1 spectrin repeat containing nuclear envelope protein 1 JBrowse link 1
1
41,608,287
41,844,840
41,763,591
42,086,662
RGD:2314546
G Syt11 synaptotagmin 11 JBrowse link 2 188,112,301 188,138,180 RGD:11079184
G Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 JBrowse link 10 93,811,350 94,132,418 RGD:1624291
RGD:1600115
RGD:14995321
G Tenm2 teneurin transmembrane protein 2 JBrowse link 10 20,846,091 21,791,771 RGD:8553824
G Tiam1 TIAM Rac1 associated GEF 1 JBrowse link 11 29,931,083 30,061,173 RGD:10043325
G Usp50 ubiquitin specific peptidase 50 JBrowse link 3 119,225,055 119,247,442 RGD:13792537
G Usp8 ubiquitin specific peptidase 8 JBrowse link 3 119,173,818 119,222,499 RGD:11076799
RGD:13792537
G Zfp804a zinc finger protein 804A JBrowse link 3 69,268,348 69,574,118 RGD:13210564
RGD:1624291
G Zmynd8 zinc finger, MYND-type containing 8 JBrowse link 3 162,480,766 162,594,145 RGD:8554267
dendritic spine cytoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Baiap2 BAR/IMD domain containing adaptor protein 2 JBrowse link 10 109,107,326 109,187,458 RGD:9684988
dendritic spine head term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 JBrowse link 1 81,852,423 81,881,565 RGD:7248609
G Cacna1s calcium voltage-gated channel subunit alpha1 S JBrowse link 13 52,889,570 52,964,558 RGD:11340724
G Dnm1 dynamin 1 JBrowse link 3 11,338,081 11,382,043 RGD:13792537
G Dnm2 dynamin 2 JBrowse link 8 22,458,869 22,540,649 RGD:13792537
G Dnm3 dynamin 3 JBrowse link 13 79,906,711 80,379,967 RGD:8553820
RGD:13792537
G Drd1 dopamine receptor D1 JBrowse link 17 11,099,736 11,104,352 RGD:7248609
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:1300188
G Fus FUS RNA binding protein JBrowse link 1 199,412,805 199,426,705 RGD:9685711
G Gper1 G protein-coupled estrogen receptor 1 JBrowse link 12 17,309,122 17,315,267 RGD:8553395
G Hpca hippocalcin JBrowse link 5 147,295,124 147,305,757 RGD:9686447
G Mx1 myxovirus (influenza virus) resistance 1 JBrowse link 11 37,891,150 37,916,775 RGD:13792537
G Mx2 MX dynamin like GTPase 2 JBrowse link 11 38,035,306 38,066,185 RGD:13792537
G Nrgn neurogranin JBrowse link 8 40,015,049 40,023,193 RGD:9835422
G Ppp1r1b protein phosphatase 1, regulatory (inhibitor) subunit 1B JBrowse link 10 86,303,727 86,312,770 RGD:13515074
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B JBrowse link 10 82,800,704 82,816,735 RGD:625590
G Rgs7bp regulator of G-protein signaling 7 binding protein JBrowse link 2 35,072,081 35,619,085 RGD:13524856
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 JBrowse link 13 48,065,280 48,286,888 RGD:1624291
RGD:1600115
G Syne1 spectrin repeat containing nuclear envelope protein 1 JBrowse link 1
1
41,608,287
41,844,840
41,763,591
42,086,662
RGD:13209020
dendritic spine neck term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 JBrowse link 1 81,852,423 81,881,565 RGD:7248609
G Drd1 dopamine receptor D1 JBrowse link 17 11,099,736 11,104,352 RGD:7248609
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:1300188
RGD:13792537
G Fxr1 FMR1 autosomal homolog 1 JBrowse link 2 120,529,716 120,570,356 RGD:13792537
G Fxr2 FMR1 autosomal homolog 2 JBrowse link 10 56,237,814 56,257,877 RGD:13792537
G Ppp1r1b protein phosphatase 1, regulatory (inhibitor) subunit 1B JBrowse link 10 86,303,727 86,312,770 RGD:13515074
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A JBrowse link 4 29,976,485 30,247,371 RGD:10043779
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B JBrowse link 10 82,800,704 82,816,735 RGD:625590
G Sri sorcin JBrowse link 4 23,004,657 23,029,233 RGD:7327208
integral component of spine apparatus membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit JBrowse link 1 123,897,341 124,039,263 RGD:13702268
G Clstn1 calsyntenin 1 JBrowse link 5 166,533,262 166,601,686 RGD:13702439
spine apparatus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:11041080
G Oprd1 opioid receptor, delta 1 JBrowse link 5 150,288,126 150,323,063 RGD:13702315
G Oprm1 opioid receptor, mu 1 JBrowse link 1 43,454,803 43,704,948 RGD:13702315
G Synpo synaptopodin JBrowse link 18 55,863,081 55,921,412 RGD:1624291
RGD:13792537
RGD:13702235

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19703
    cellular anatomical entity 19322
      postsynapse 782
        dendritic spine 217
          cytoskeleton of dendritic spine + 0
          dendritic spine cytoplasm 1
          dendritic spine head 18
          dendritic spine neck + 9
          spine apparatus + 6
          thorny excrescence 0
Path 2
Term Annotations click to browse term
  cellular_component 19703
    cellular anatomical entity 19322
      cell projection 2442
        plasma membrane bounded cell projection 2384
          neuron projection 1630
            dendritic tree 777
              dendrite 775
                dendritic spine 217
                  cytoskeleton of dendritic spine + 0
                  dendritic spine cytoplasm 1
                  dendritic spine head 18
                  dendritic spine neck + 9
                  spine apparatus + 6
                  thorny excrescence 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.