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ONTOLOGY REPORT - ANNOTATIONS


Term:axon initial segment
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Accession:GO:0043194 term browser browse the term
Definition:Portion of the axon proximal to the neuronal cell body, at the level of the axon hillock. The action potentials that propagate along the axon are generated at the level of this initial segment.
Synonyms:exact_synonym: initial segment
 xref: NIF_Subcellular:sao256000789


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axon initial segment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank3 ankyrin 3 IDA
IEA
ISO
IMP
GO_REF:0000107
(MGI:MGI:4837024|PMID:20877009), (MGI:MGI:5426783|PMID:11724816), (MGI:MGI:5708763|PMID:26671463), (MGI:MGI:5883190|PMID:27356871), (MGI:MGI:6212949|PMID:25950943)
PMID:28426968
(PMID:27356871)
Ensembl
RGD
PMID:11724816, PMID:20877009, PMID:25950943, PMID:26671463, PMID:27356871, PMID:21551097, PMID:25950943, PMID:28426968, PMID:11724816 GO_REF:0000107, MGI:MGI:4837024, MGI:MGI:5426783, MGI:MGI:5708763, MGI:MGI:5883190, MGI:MGI:6212949, RGD:6767287, RGD:13800538, RGD:13514087, RGD:8553674 NCBI chr20:19,948,767...20,480,628
Ensembl chr20:20,105,047...20,480,623
JBrowse link
G Bcan brevican IDA MMO:0000538 RGD PMID:17709431 RGD:14392774 NCBI chr 2:187,359,674...187,373,133
Ensembl chr 2:187,359,677...187,372,657
JBrowse link
G Bin1 bridging integrator 1 IDA PMID:9182667 Alzheimers_University_of_Toronto PMID:9182667 RGD:8553847 NCBI chr18:25,163,575...25,222,139
Ensembl chr18:25,163,561...25,222,135
JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta ISO (MGI:MGI:4837024|PMID:20877009) RGD PMID:20877009 MGI:MGI:4837024 NCBI chr 2:230,900,907...231,132,207
Ensembl chr 2:230,901,126...231,132,039
JBrowse link
G Cck cholecystokinin IDA nonpyramidal neurons in the basolateral amygdalar complex after colchicine treatment RGD PMID:12763251 RGD:1626094 NCBI chr 8:130,120,525...130,127,515
Ensembl chr 8:130,120,523...130,127,392
JBrowse link
G Cnga3 cyclic nucleotide gated channel subunit alpha 3 IDA RGD PMID:18434027 RGD:6902905 NCBI chr 9:43,807,412...43,858,225
Ensembl chr 9:43,807,677...43,854,396
JBrowse link
G Kcnq2 potassium voltage-gated channel subfamily Q member 2 ISO
IBA
(MGI:MGI:3617955|PMID:16525039)
PMID:21873635
RGD PMID:16525039, PMID:21873635 MGI:MGI:3617955, RGD:13792537 NCBI chr 3:176,585,897...176,645,029
Ensembl chr 3:176,589,906...176,644,951
JBrowse link
G Kcnq3 potassium voltage-gated channel subfamily Q member 3 ISO
IBA
IEA
IDA
(MGI:MGI:3617955|PMID:16525039)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:16525039, PMID:21873635, PMID:24333508 GO_REF:0000107, MGI:MGI:3617955, RGD:13792537, RGD:9686369 NCBI chr 7:106,714,479...107,009,639
Ensembl chr 7:106,717,229...107,009,330
JBrowse link
G Lrrc7 leucine rich repeat containing 7 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:8824323, PMID:21873635 RGD:1299511, RGD:13792537 NCBI chr 2:264,910,594...265,300,860
Ensembl chr 2:264,910,594...265,300,868
JBrowse link
G Map1a microtubule-associated protein 1A ISO (MGI:MGI:5632407|PMID:25788676) RGD PMID:25788676 MGI:MGI:5632407 NCBI chr 3:113,251,918...113,272,193
Ensembl chr 3:113,251,778...113,272,186
JBrowse link
G Map2 microtubule-associated protein 2 IEA
ISO
IDA
GO_REF:0000107
(MGI:MGI:6148385|PMID:28426968)
Ensembl
RGD
PMID:28426968, PMID:28426968 GO_REF:0000107, MGI:MGI:6148385, RGD:13514087 NCBI chr 9:73,204,753...73,462,965
Ensembl chr 9:73,319,710...73,462,972
JBrowse link
G Nav1 neuron navigator 1 ISO
IBA
(MGI:MGI:5708763|PMID:26671463)
PMID:21873635
RGD PMID:26671463, PMID:21873635 MGI:MGI:5708763, RGD:13792537 NCBI chr13:52,260,474...52,515,016
Ensembl chr13:52,267,254...52,514,875
JBrowse link
G Nfasc neurofascin IDA
ISO
PMID:11724816
PMID:28426968
PMID:27356871
(MGI:MGI:5708763|PMID:26671463)
RGD PMID:26671463, PMID:11724816, PMID:28426968, PMID:22649224, PMID:27356871 MGI:MGI:5708763, RGD:8553674, RGD:13514087, RGD:12904752, RGD:12793037 NCBI chr13:49,335,407...49,522,474
Ensembl chr13:49,335,408...49,522,415
JBrowse link
G Nrcam neuronal cell adhesion molecule IDA PMID:11724816
MMO:0000538
BHF-UCL
RGD
PMID:11724816, PMID:17709431 RGD:8553674, RGD:14392774 NCBI chr 6:64,297,843...64,867,408
Ensembl chr 6:64,297,888...64,864,996
JBrowse link
G Scn1a sodium voltage-gated channel alpha subunit 1 ISO
IEA
(MGI:MGI:3712711|PMID:17537961)
GO_REF:0000107
RGD
Ensembl
PMID:17537961 GO_REF:0000107, MGI:MGI:3712711 NCBI chr 3:52,388,811...52,533,365
Ensembl chr 3:52,381,975...52,510,507
JBrowse link
G Scn2a sodium voltage-gated channel alpha subunit 2 IDA RGD PMID:12036953 RGD:625497 NCBI chr 3:51,687,910...51,822,008
Ensembl chr 3:51,687,809...51,822,250
JBrowse link
G Scn8a sodium voltage-gated channel alpha subunit 8 IDA PMID:11724816 BHF-UCL PMID:11724816 RGD:8553674 NCBI chr 7:142,575,629...142,683,659
Ensembl chr 7:142,575,672...142,684,114
JBrowse link
G Sptbn4 spectrin, beta, non-erythrocytic 4 IDA
ISO
PMID:11086001
MMO:0000538
PMID:28426968
(MGI:MGI:2181223|PMID:11807096), (MGI:MGI:4837024|PMID:20877009), (MGI:MGI:5708763|PMID:26671463), (MGI:MGI:5883190|PMID:27356871)
RGD PMID:11807096, PMID:20877009, PMID:26671463, PMID:27356871, PMID:11086001, PMID:17709431, PMID:28426968 MGI:MGI:2181223, MGI:MGI:4837024, MGI:MGI:5708763, MGI:MGI:5883190, RGD:8553353, RGD:14392774, RGD:13514087 NCBI chr 1:84,168,494...84,254,679
Ensembl chr 1:84,168,495...84,254,645
JBrowse link
G Trim46 tripartite motif-containing 46 ISO (MGI:MGI:5708763|PMID:26671463) RGD PMID:26671463 MGI:MGI:5708763 NCBI chr 2:188,548,608...188,561,617
Ensembl chr 2:188,548,644...188,561,360
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      axon initial segment 19
Path 2
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      cell projection 2549
        plasma membrane bounded cell projection 2478
          neuron projection 1659
            axon 842
              main axon 85
                axon initial segment 19
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.