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ONTOLOGY REPORT - ANNOTATIONS


Term:alcohol binding
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Accession:GO:0043178 term browser browse the term
Definition:Interacting selectively and non-covalently with an alcohol, any of a class of alkyl compounds containing a hydroxyl group.


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alcohol binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdipt CDP-diacylglycerol--inositol 3-phosphatidyltransferase JBrowse link 1 198,409,186 198,413,497 RGD:1626301
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic JBrowse link 3 164,966,637 164,986,180 RGD:1601442
all-trans-retinol binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rbp1 retinol binding protein 1 JBrowse link 8 106,449,321 106,470,842 RGD:1624291
RGD:1600115
cholesterol binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anxa6 annexin A6 JBrowse link 10 40,320,581 40,375,605 RGD:1600115
RGD:13792537
RGD:1624291
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:1624291
RGD:13792537
G Apoa2 apolipoprotein A2 JBrowse link 13 89,596,872 89,598,805 RGD:1624291
RGD:13792537
G Apoa4 apolipoprotein A4 JBrowse link 8 50,536,983 50,539,371 RGD:13792537
G Apoa5 apolipoprotein A5 JBrowse link 8 50,559,079 50,561,720 RGD:13792537
G Apod apolipoprotein D JBrowse link 11 72,705,204 72,726,263 RGD:1600115
RGD:13792537
RGD:1624291
G Cd81 Cd81 molecule JBrowse link 1 216,237,663 216,253,460 RGD:1600115
RGD:1624291
G Crp C-reactive protein JBrowse link 13 91,080,448 91,081,358 RGD:1580272
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 JBrowse link 8 62,798,317 62,809,848 RGD:1599700
G Erlin1 ER lipid raft associated 1 JBrowse link 1 263,810,439 263,845,762 RGD:1624291
RGD:13792537
G Erlin2 ER lipid raft associated 2 JBrowse link 16 69,179,005 69,195,452 RGD:13792537
G Gramd1a GRAM domain containing 1A JBrowse link 1 89,563,982 89,590,406 RGD:1600115
RGD:1624291
G Gramd1b GRAM domain containing 1B JBrowse link 8 44,160,634 44,399,110 RGD:1624291
G Gramd1c GRAM domain containing 1C JBrowse link 11
11
61,609,370
62,580,983
61,659,355
62,634,961
RGD:1624291
G Nfe2l1 nuclear factor, erythroid 2-like 1 JBrowse link 10 84,686,762 84,699,313 RGD:1624291
G Npc1 NPC intracellular cholesterol transporter 1 JBrowse link 18 3,616,878 3,662,656 RGD:1624291
G Npc2 NPC intracellular cholesterol transporter 2 JBrowse link 6 108,467,410 108,488,330 RGD:1624291
RGD:13792537
G Osbp2 oxysterol binding protein 2 JBrowse link 14 83,943,976 84,107,031 RGD:1624291
RGD:13792537
G Osbpl10 oxysterol binding protein-like 10 JBrowse link 8 123,029,722 123,303,553 RGD:1624291
RGD:13792537
G Osbpl1a oxysterol binding protein-like 1A JBrowse link 18 4,097,011 4,294,136 RGD:1624291
RGD:13792537
G Osbpl2 oxysterol binding protein-like 2 JBrowse link 3 175,493,650 175,538,965 RGD:1624291
RGD:13792537
G Osbpl3 oxysterol binding protein-like 3 JBrowse link 4 80,025,453 80,202,532 RGD:1624291
RGD:13792537
G Osbpl5 oxysterol binding protein-like 5 JBrowse link 1 216,866,263 216,920,625 RGD:1624291
RGD:13792537
G Osbpl6 oxysterol binding protein-like 6 JBrowse link 3 63,257,646 63,455,105 RGD:13792537
G Osbpl7 oxysterol binding protein-like 7 JBrowse link 10 84,986,330 85,003,947 RGD:1624291
RGD:13792537
G Osbpl8 oxysterol binding protein-like 8 JBrowse link 7 53,878,906 54,030,110 RGD:1624291
RGD:13792537
G Pmp2 peripheral myelin protein 2 JBrowse link 2 93,827,504 93,831,419 RGD:1624291
G Prom1 prominin 1 JBrowse link 14 71,532,321 71,637,400 RGD:13792537
G Prom2 prominin 2 JBrowse link 3 120,087,633 120,107,495 RGD:8554554
RGD:13792537
G Ptch1 patched 1 JBrowse link 17 1,032,242 1,085,885 RGD:1624291
G Scarb2 scavenger receptor class B, member 2 JBrowse link 14 17,064,173 17,115,620 RGD:1624291
G Scp2 sterol carrier protein 2 JBrowse link 5 127,647,934 127,735,703 RGD:1624291
G Soat1 sterol O-acyltransferase 1 JBrowse link 13 74,035,258 74,077,759 RGD:1624291
RGD:13792537
RGD:1600115
G Soat2 sterol O-acyltransferase 2 JBrowse link 7 143,754,892 143,767,989 RGD:1624291
RGD:13792537
RGD:1600115
G Star steroidogenic acute regulatory protein JBrowse link 16 71,036,204 71,040,847 RGD:1624291
RGD:13792537
G Stard3 StAR-related lipid transfer domain containing 3 JBrowse link 10 86,313,430 86,335,868 RGD:1624291
G Stard3nl STARD3 N-terminal like JBrowse link 17 47,662,553 47,696,453 RGD:1624291
G Stard4 StAR-related lipid transfer domain containing 4 JBrowse link 18 25,982,210 25,997,555 RGD:1624291
G Stard5 StAR-related lipid transfer domain containing 5 JBrowse link 1 145,770,135 145,780,001 RGD:1624291
G Sult2b1 sulfotransferase family 2B member 1 JBrowse link 1 101,712,254 101,774,683 RGD:1624291
G Syp synaptophysin JBrowse link X 15,694,699 15,709,244 RGD:1600115
RGD:1624291
G Tspo translocator protein JBrowse link 7 124,460,358 124,470,610 RGD:13792537
G Tspo2 translocator protein 2 JBrowse link 9 14,510,378 14,514,609 RGD:1624291
RGD:13792537
ethanol binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adh1 alcohol dehydrogenase 1 (class I) JBrowse link 2 243,550,655 243,562,243 RGD:1642948
RGD:1642949
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide JBrowse link 2 243,702,035 243,720,063 RGD:1358222
RGD:1600115
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide JBrowse link 2 243,500,540 243,516,865 RGD:631904
RGD:1624291
RGD:1600115
G Prkce protein kinase C, epsilon JBrowse link 6 9,483,400 9,973,396 RGD:1624291
inositol 1,3,4,5 tetrakisphosphate binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adap2 ArfGAP with dual PH domains 2 JBrowse link 10 67,494,851 67,527,582 RGD:1624291
RGD:1600115
G Astn2 astrotactin 2 JBrowse link 5 81,179,614 82,168,528 RGD:1624291
G Itpr3 inositol 1,4,5-trisphosphate receptor, type 3 JBrowse link 20 5,645,894 5,711,702 RGD:729040
G Syt2 synaptotagmin 2 JBrowse link 13 51,569,248 51,577,824 RGD:1624291
RGD:1600115
inositol 1,4,5 trisphosphate binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07062512.1 RGD:13792537
G Cyth2 cytohesin 2 JBrowse link 1 101,796,349 101,803,407 RGD:1624291
RGD:1600115
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 JBrowse link 4 140,247,297 140,580,749 RGD:1600115
RGD:13792537
G Itpr2 inositol 1,4,5-trisphosphate receptor, type 2 JBrowse link 4 180,423,452 180,800,088 RGD:7175267
RGD:1600115
RGD:13792537
RGD:7175277
G Itpr3 inositol 1,4,5-trisphosphate receptor, type 3 JBrowse link 20 5,645,894 5,711,702 RGD:1624291
RGD:13792537
RGD:1600115
RGD:7175268
RGD:7175265
G LOC102549471 short transient receptor potential channel 2-like JBrowse link 1 167,158,720 167,180,052 RGD:13792537
G Plcd1 phospholipase C, delta 1 JBrowse link 8 127,753,514 127,782,070 RGD:12792989
G Plcl1 phospholipase C-like 1 JBrowse link 9 62,016,112 62,349,244 RGD:1600115
G Plcl2 phospholipase C-like 2 JBrowse link 9 1,782,536 1,984,654 RGD:1600115
G Rph3a rabphilin 3A JBrowse link 12 41,073,296 41,149,799 RGD:2314874
G Trpc1 transient receptor potential cation channel, subfamily C, member 1 JBrowse link 8 103,503,982 103,554,905 RGD:1624291
RGD:13792537
RGD:1600115
G Trpc2 transient receptor potential cation channel subfamily C member 2 JBrowse link 1 167,180,103 167,192,456 RGD:13792537
RGD:1624291
G Trpc3 transient receptor potential cation channel, subfamily C, member 3 JBrowse link 2 123,329,954 123,467,574 RGD:1624291
RGD:13792537
RGD:1600115
G Trpc4 transient receptor potential cation channel, subfamily C, member 4 JBrowse link 2 143,433,102 143,605,757 RGD:1624291
RGD:13792537
RGD:1600115
G Trpc5 transient receptor potential cation channel, subfamily C, member 5 JBrowse link X 115,624,670 115,908,248 RGD:1624291
RGD:13792537
G Trpc6 transient receptor potential cation channel, subfamily C, member 6 JBrowse link 8 6,811,543 6,917,534 RGD:1624291
RGD:13792537
G Trpc7 transient receptor potential cation channel, subfamily C, member 7 JBrowse link 17 8,134,267 8,280,360 RGD:13792537
inositol hexakisphosphate binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07065139.2 RGD:13792537
G Gle1 GLE1 RNA export mediator JBrowse link 3 8,498,098 8,530,218 RGD:13792537
G Itpr3 inositol 1,4,5-trisphosphate receptor, type 3 JBrowse link 20 5,645,894 5,711,702 RGD:729040
G Snap91 synaptosome associated protein 91 JBrowse link 8 94,447,558 94,564,772 RGD:13506240
G Xpr1 xenotropic and polytropic retrovirus receptor 1 JBrowse link 13 72,918,552 73,056,785 RGD:1624291
RGD:13792537
retinol binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide JBrowse link 2 243,702,035 243,720,063 RGD:1624291
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide JBrowse link 2 243,500,540 243,516,865 RGD:631904
RGD:1624291
RGD:1600115
G Crabp1 cellular retinoic acid binding protein 1 JBrowse link 8 59,344,097 59,352,135 RGD:1600115
G Crabp2 cellular retinoic acid binding protein 2 JBrowse link 2 187,322,416 187,326,794 RGD:1600115
G Lrat lecithin retinol acyltransferase JBrowse link 2 181,896,304 181,905,366 RGD:1599831
RGD:1599832
RGD:1599829
G Rbp1 retinol binding protein 1 JBrowse link 8 106,449,321 106,470,842 RGD:6484697
RGD:6893656
RGD:6484735
G Rbp2 retinol binding protein 2 JBrowse link 8 106,479,253 106,527,726 RGD:729693
RGD:6893656
RGD:6484697
G Rbp3 retinol binding protein 3 JBrowse link 16 10,277,775 10,286,243 RGD:6893658
RGD:13792537
G Rbp4 retinol binding protein 4 JBrowse link 1 256,806,476 256,813,678 RGD:6484695
RGD:1624291
RGD:11567252
G Stra6 signaling receptor and transporter of retinol STRA6 JBrowse link 8 62,925,364 62,944,438 RGD:1600115

Term paths to the root
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Term Annotations click to browse term
  molecular_function 19527
    binding 15910
      small molecule binding 2591
        alcohol binding 81
          11-deoxycorticosterone binding 0
          11-deoxycortisol binding 0
          17alpha-hydroxyprogesterone binding 0
          abscisic acid binding 0
          cholesterol binding 43
          corticosterone binding 0
          cortisol binding 0
          ecdysone binding 0
          ethanol binding 4
          hydroxyectoine binding 0
          inositol 1,3,4,5 tetrakisphosphate binding 4
          inositol 1,4,5 trisphosphate binding 17
          inositol hexakisphosphate binding 5
          retinol binding + 10
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.