Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:nucleotide salvage
go back to main search page
Accession:GO:0043173 term browser browse the term
Definition:Any process which produces a nucleotide, a compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety, from derivatives of it without de novo synthesis.
Synonyms:xref: Reactome:R-HSA-8956321 "Nucleotide salvage";   Wikipedia:Nucleotide_salvage

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
AMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in ISO (PMID:8064675) MGI PMID:8064675 NCBI chr 2:19,167,209...19,200,233 JBrowse link
G ADK adenosine kinase involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 NCBI chr 9:56,659,284...57,222,279
Ensembl chr 9:56,660,129...57,222,147 		JBrowse link
G ADSL adenylosuccinate lyase involved_in ISO (PMID:25681585) MGI PMID:25681585 NCBI chr19:22,920,971...22,940,468 JBrowse link
G ADSS1 adenylosuccinate synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:82,662,232...82,684,690
Ensembl chr24:82,662,319...82,684,874 		JBrowse link
G APRT adenine phosphoribosyltransferase involved_in
acts_upstream_of_or_within 		IEA
ISO 		(PMID:8864750) UniProt
Ensembl
TreeGrafter
MGI		 PMID:8864750 GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:74,196,858...74,199,789
Ensembl chr 5:74,194,013...74,199,891 		JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 involved_in ISO (PMID:10037486), (PMID:25681585), (PMID:8064675) MGI PMID:8064675 PMID:10037486 PMID:25681585 NCBI chr  X:109,629,674...109,671,409 JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:109,630,112...109,664,985 JBrowse link
CTP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UCK1 uridine-cytidine kinase 1 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chr12:6,612,306...6,634,326
Ensembl chr12:6,612,378...6,618,968 		JBrowse link
G UCK2 uridine-cytidine kinase 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chr25:62,974,515...63,059,436
Ensembl chr25:62,974,257...63,059,414 		JBrowse link
G UCKL1 uridine-cytidine kinase 1 like 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 2:282,267...299,148
Ensembl chr 2:282,365...299,099 		JBrowse link
dAMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADK adenosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:56,659,284...57,222,279
Ensembl chr 9:56,660,129...57,222,147 		JBrowse link
G DCK deoxycytidine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:19,503,855...19,535,355
Ensembl chr 7:19,504,038...19,535,674 		JBrowse link
G DGUOK deoxyguanosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:33,320,957...33,356,088
Ensembl chr14:33,320,969...33,356,093 		JBrowse link
GMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in ISO (PMID:718989) MGI PMID:718989 NCBI chr 2:19,167,209...19,200,233 JBrowse link
G ADK adenosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:56,659,284...57,222,279
Ensembl chr 9:56,660,129...57,222,147 		JBrowse link
G AMPD1 adenosine monophosphate deaminase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:18,973,547...18,996,082
Ensembl chr20:18,974,204...18,996,293 		JBrowse link
G APRT adenine phosphoribosyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:74,196,858...74,199,789
Ensembl chr 5:74,194,013...74,199,891 		JBrowse link
G GMPS guanine monophosphate synthase involved_in ISO PMID:6180773 MGI PMID:6180773 RGD:150521637 NCBI chr15:34,817,603...34,885,363
Ensembl chr15:34,815,066...34,885,228 		JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 involved_in
acts_upstream_of_or_within 		ISO (PMID:4208686)
(PMID:718989)
(PMID:10037486) 		MGI PMID:718989 PMID:4208686 PMID:10037486 NCBI chr  X:109,629,674...109,671,409 JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 involved_in
acts_upstream_of_or_within 		IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 Ensembl chr  X:109,630,112...109,664,985 JBrowse link
IMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMPD1 adenosine monophosphate deaminase 1 involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 NCBI chr20:18,973,547...18,996,082
Ensembl chr20:18,974,204...18,996,293 		JBrowse link
G AMPD2 adenosine monophosphate deaminase 2 involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 NCBI chr20:23,914,652...23,926,848
Ensembl chr20:23,913,254...23,926,904 		JBrowse link
G AMPD3 adenosine monophosphate deaminase 3 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 NCBI chr 1:54,318,746...54,374,361
Ensembl chr 1:54,316,334...54,373,619 		JBrowse link
G APRT adenine phosphoribosyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:74,196,858...74,199,789
Ensembl chr 5:74,194,013...74,199,891 		JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 involved_in ISO (PMID:8878108)
(PMID:10037486) 		MGI PMID:8878108 PMID:10037486 NCBI chr  X:109,629,674...109,671,409 JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 Ensembl chr  X:109,630,112...109,664,985 JBrowse link
G PRTFDC1 phosphoribosyl transferase domain containing 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 9:24,568,867...24,678,020
Ensembl chr 9:24,568,692...24,677,550 		JBrowse link
NAD+ biosynthetic process via the salvage pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NADSYN1 NAD synthetase 1 involved_in ISO (PMID:38357931) MGI PMID:38357931 NCBI chr 1:3,189,054...3,243,087
Ensembl chr 1:3,188,348...3,238,435 		JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase involved_in ISO (PMID:31553812)
(PMID:15381699) 		MGI PMID:15381699 PMID:31553812 NCBI chr21:75,160,748...75,195,781
Ensembl chr21:75,158,596...75,196,025 		JBrowse link
G NAPRT nicotinate phosphoribosyltransferase involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:137,794,933...137,799,145
Ensembl chr 8:137,792,993...137,798,658 		JBrowse link
G NMNAT1 nicotinamide nucleotide adenylyltransferase 1 involved_in ISO (PMID:15381699) MGI PMID:15381699 NCBI chr20:121,790,836...121,797,043 JBrowse link
G NMNAT2 nicotinamide nucleotide adenylyltransferase 2 involved_in ISO (PMID:30909324)
(PMID:34403688)
(PMID:38282024) 		MGI PMID:30909324 PMID:34403688 PMID:38282024 NCBI chr25:45,954,934...46,130,106
Ensembl chr25:45,954,862...46,125,378 		JBrowse link
G NMNAT3 nicotinamide nucleotide adenylyltransferase 3 involved_in ISO (PMID:31553812) MGI PMID:31553812 NCBI chr15:50,880,146...50,990,958
Ensembl chr15:50,880,235...50,991,281 		JBrowse link
G NMRK1 nicotinamide riboside kinase 1 involved_in ISO (PMID:34403688) MGI PMID:34403688 NCBI chr12:86,112,583...86,140,457
Ensembl chr12:86,112,271...86,140,449 		JBrowse link
G NMRK2 nicotinamide riboside kinase 2 involved_in ISO (PMID:34403688) MGI PMID:34403688 NCBI chr 6:3,685,337...3,697,868
Ensembl chr 6:3,688,166...3,697,960 		JBrowse link
G SLC25A51 solute carrier family 25 member 51 involved_in ISO (PMID:32906142) MGI PMID:32906142 NCBI chr12:42,689,643...42,702,696
Ensembl chr12:42,699,621...42,700,514 		JBrowse link
purine nucleotide salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in ISO (PMID:9361033) UniProt PMID:9361033 NCBI chr 2:19,167,209...19,200,233 JBrowse link
UMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDA cytidine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:111,931,365...111,960,172
Ensembl chr20:111,931,364...111,960,036 		JBrowse link
G UCK1 uridine-cytidine kinase 1 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chr12:6,612,306...6,634,326
Ensembl chr12:6,612,378...6,618,968 		JBrowse link
G UCK2 uridine-cytidine kinase 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chr25:62,974,515...63,059,436
Ensembl chr25:62,974,257...63,059,414 		JBrowse link
G UCKL1 uridine-cytidine kinase 1 like 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 2:282,267...299,148
Ensembl chr 2:282,365...299,099 		JBrowse link
G UPP1 uridine phosphorylase 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000041 GO_REF:0000107 NCBI chr21:10,686,600...10,707,181
Ensembl chr21:10,686,093...10,706,347 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19706
    cellular process 19211
      metabolic process 12971
        biosynthetic process 9783
          metabolic compound salvage 48
            nucleotide salvage 28
              purine nucleotide salvage + 23
              pyridine nucleotide salvage + 9
              pyrimidine nucleotide salvage + 5
Path 2
Term Annotations click to browse term
  biological_process 19706
    cellular process 19211
      metabolic process 12971
        primary metabolic process 11397
          nucleobase-containing compound metabolic process 7275
            nucleobase-containing small molecule metabolic process 637
              nucleoside phosphate metabolic process 610
                nucleoside phosphate biosynthetic process 277
                  nucleotide biosynthetic process 196
                    nucleotide salvage 28
                      purine nucleotide salvage + 23
                      pyridine nucleotide salvage + 9
                      pyrimidine nucleotide salvage + 5
paths to the root