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ONTOLOGY REPORT - ANNOTATIONS

Term:extracellular structure organization
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Accession:GO:0043062 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures in the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane, and also covers the host cell environment outside an intracellular parasite.
Synonyms:exact_synonym: extracellular structure organisation;   extracellular structure organization and biogenesis


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basement membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB1 laminin subunit beta 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:107,670,120...107,747,242
Ensembl chr 9:107,671,152...107,772,269 		JBrowse link
G LAMB2 laminin subunit beta 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:31,738,282...31,750,623
Ensembl chr13:31,738,286...31,750,833 		JBrowse link
G LAMB3 laminin subunit beta 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:133,298,009...133,351,162
Ensembl chr 9:133,311,834...133,351,197 		JBrowse link
G LAMB4 laminin subunit beta 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:107,777,842...107,899,725
Ensembl chr 9:107,778,499...107,880,274 		JBrowse link
G NTN4 netrin 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:87,671,153...87,784,704
Ensembl chr 5:87,671,873...87,784,702 		JBrowse link
G PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16467571) Ensembl
MGI		 PMID:16467571 GO_REF:0000107 NCBI chr 3:8,911,787...8,919,525
Ensembl chr 3:8,911,791...8,919,516 		JBrowse link
G PXDN peroxidasin acts_upstream_of
involved_in		 ISO
IEA		 (PMID:32543734) UniProt
Ensembl		 PMID:32543734 GO_REF:0000107 NCBI chr 3:132,306,288...132,362,853
Ensembl chr 3:132,306,447...132,362,841 		JBrowse link
G RAMP2 receptor activity modifying protein 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:20,092,204...20,094,426
Ensembl chr12:20,092,196...20,094,469 		JBrowse link
basement membrane disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSS cathepsin S involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:98,415,273...98,442,952
Ensembl chr 4:98,417,883...98,442,950 		JBrowse link
G HPN hepsin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:44,608,076...44,628,044
Ensembl chr 6:44,608,071...44,628,049 		JBrowse link
basement membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV1 caveolin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11884617) Ensembl
MGI		 PMID:11884617 GO_REF:0000107 NCBI chr18:29,648,120...29,682,451
Ensembl chr18:29,649,992...29,682,465 		JBrowse link
G CAV2 caveolin 2 acts_upstream_of_or_within ISO (PMID:11884617) MGI PMID:11884617 NCBI chr18:29,699,012...29,707,277
Ensembl chr18:29,699,020...29,707,277 		JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in ISO (PMID:22235340) MGI PMID:22235340 NCBI chr15:93,556,914...93,595,678
Ensembl chr15:93,526,603...93,596,363 		JBrowse link
G COL4A1 collagen type IV alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:76,858,332...76,997,409
Ensembl chr11:76,858,356...76,997,322 		JBrowse link
G DAG1 dystroglycan 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23217742) Ensembl
MGI		 PMID:23217742 GO_REF:0000107 NCBI chr13:32,028,019...32,092,450
Ensembl chr13:32,029,522...32,092,450 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26024086) Ensembl
MGI		 PMID:26024086 GO_REF:0000107 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,610...20,935,540 		JBrowse link
G FERMT1 FERM domain containing kindlin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,080,585...15,137,947
Ensembl chr17:15,080,587...15,137,753 		JBrowse link
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28039900) Ensembl
MGI		 PMID:28039900 GO_REF:0000107 NCBI chr 6:52,627,466...52,639,255
Ensembl chr 6:52,627,471...52,639,253 		JBrowse link
G FKTN fukutin acts_upstream_of_or_within ISO (PMID:29360985) MGI PMID:29360985 NCBI chr 1:246,852,387...246,916,650 JBrowse link
G FLRT2 fibronectin leucine rich transmembrane protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:107,812,354...107,913,006
Ensembl chr 7:107,812,613...107,913,618 		JBrowse link
G FSHR follicle stimulating hormone receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9811848) Ensembl
MGI		 PMID:9811848 GO_REF:0000107 NCBI chr 3:91,607,236...91,775,255
Ensembl chr 3:91,607,305...91,774,683 		JBrowse link
G GAS2 growth arrest specific 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27734842) Ensembl
MGI		 PMID:27734842 GO_REF:0000107 NCBI chr 2:36,712,758...36,885,436
Ensembl chr 2:36,711,612...36,885,620 		JBrowse link
G HMCN1 hemicentin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:126,850,208...127,342,696
Ensembl chr 9:126,850,313...127,342,685 		JBrowse link
G ITGB1 integrin subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:56,078,393...56,130,608
Ensembl chr10:56,078,396...56,173,326 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:12140558), (PMID:21970971) MGI PMID:12140558 PMID:21970971
G LOC100623720 collagen alpha-1(VI) chain acts_upstream_of_or_within ISO (PMID:25158062) MGI PMID:25158062 NCBI chr13:208,295,245...208,321,789
Ensembl chr13:208,295,451...208,313,127 		JBrowse link
G MMP11 matrix metallopeptidase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18622425) Ensembl
MGI		 PMID:18622425 GO_REF:0000107 NCBI chr14:49,907,684...49,917,494
Ensembl chr14:49,907,687...49,912,617 		JBrowse link
G PMP22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (PMID:16436605) MGI PMID:16436605 NCBI chr12:58,679,773...58,734,195
Ensembl chr12:58,679,775...58,707,925 		JBrowse link
G POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21970971) Ensembl
MGI		 PMID:21970971 GO_REF:0000107 NCBI chr 6:165,212,828...165,222,412
Ensembl chr 6:165,212,833...165,222,409 		JBrowse link
G POMT2 protein O-mannosyltransferase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21970971) Ensembl
MGI		 PMID:21970971 GO_REF:0000107 NCBI chr 7:100,350,451...100,392,164
Ensembl chr 7:100,350,460...100,392,332 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,707,026...73,826,529
Ensembl chr 5:73,707,050...73,826,430 		JBrowse link
G PXDN peroxidasin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:132,306,288...132,362,853
Ensembl chr 3:132,306,447...132,362,841 		JBrowse link
G RIC8A RIC8 guanine nucleotide exchange factor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21069829) Ensembl
MGI		 PMID:21069829 GO_REF:0000107 NCBI chr 2:32,135...37,682
Ensembl chr 2:32,215...39,360 		JBrowse link
G SPINT2 serine peptidase inhibitor, Kunitz type 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19592578) Ensembl
MGI		 PMID:19592578 GO_REF:0000107 NCBI chr 6:47,181,772...47,210,564
Ensembl chr 6:47,181,768...47,210,559 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:16186342) MGI PMID:16186342 NCBI chr 7:7,221,654...7,244,626
Ensembl chr 7:7,221,656...7,244,612 		JBrowse link
biofilm matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100154047 cathepsin G involved_in ISO (PMID:32995850) UniProt PMID:32995850 NCBI chr 7:74,761,602...74,772,950 JBrowse link
collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:3070812) Ensembl
MGI		 PMID:3070812 GO_REF:0000107 NCBI chr 7:54,449,830...54,520,606
Ensembl chr 7:54,449,816...54,519,194 		JBrowse link
G ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:19,547,003...19,920,780
Ensembl chr16:19,547,011...19,920,513 		JBrowse link
G ADAMTS14 ADAM metallopeptidase with thrombospondin type 1 motif 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11741898) Ensembl
MGI		 PMID:11741898 GO_REF:0000107 NCBI chr14:73,565,158...73,657,257
Ensembl chr14:73,538,090...73,653,560 		JBrowse link
G ADAMTS19 ADAM metallopeptidase with thrombospondin type 1 motif 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:132,145,266...132,413,116
Ensembl chr 2:132,145,310...132,409,915 		JBrowse link
G ADAMTS2 ADAM metallopeptidase with thrombospondin type 1 motif 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16556917) Ensembl
MGI		 PMID:16556917 GO_REF:0000107 NCBI chr 2:79,182,901...79,406,879
Ensembl chr 2:79,182,943...79,406,875 		JBrowse link
G ADAMTS7 ADAM metallopeptidase with thrombospondin type 1 motif 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:47,919,398...47,994,528
Ensembl chr 7:47,929,033...47,994,453 		JBrowse link
G ANTXR2 ANTXR cell adhesion molecule 2 acts_upstream_of_or_within ISO (PMID:28604699) MGI PMID:28604699 NCBI chr 8:137,728,849...137,878,336
Ensembl chr 8:137,618,616...137,878,333 		JBrowse link
G ANXA2 annexin A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14702107) Ensembl
MGI		 PMID:14702107 GO_REF:0000107 NCBI chr 1:111,588,721...111,635,064
Ensembl chr 1:111,588,306...111,635,059 		JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:20889), (PMID:8895222)
(PMID:8096378)
(PMID:4808708)
(PMID:16338116)		 MGI PMID:20889 PMID:4808708 PMID:8096378 PMID:8895222 PMID:16338116 NCBI chr  X:61,972,544...62,110,058
Ensembl chr  X:61,972,991...62,110,048 		JBrowse link
G COL11A1 collagen type XI alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17029294), (PMID:21467034)
(PMID:17029294), (PMID:17683922), (PMID:21467034), (PMID:3070812), (PMID:4100752), (PMID:4110409), (PMID:7859283)		 Ensembl
MGI		 PMID:3070812 PMID:4100752 PMID:4110409 PMID:7859283 PMID:17029294 More... GO_REF:0000107 NCBI chr 4:115,638,381...115,841,679
Ensembl chr 4:115,634,172...115,840,708 		JBrowse link
G COL11A2 collagen type XI alpha 2 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10581026), (PMID:11668593) Ensembl
MGI		 PMID:10581026 PMID:11668593 GO_REF:0000107 NCBI chr 7:25,204,496...25,234,880
Ensembl chr 7:25,204,497...25,234,888 		JBrowse link
G COL14A1 collagen type XIV alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22906538) Ensembl
MGI		 PMID:22906538 GO_REF:0000107 NCBI chr 4:18,690,197...18,925,111
Ensembl chr 4:18,690,198...18,924,971 		JBrowse link
G COL18A1 collagen type XVIII alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:207,907,835...207,984,082
Ensembl chr13:207,940,948...207,982,938 		JBrowse link
G COL1A1 collagen type I alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:26,379,087...26,397,180
Ensembl chr12:26,379,090...26,397,004 		JBrowse link
G COL1A2 collagen type I alpha 2 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:74,174,484...74,210,407
Ensembl chr 9:74,173,931...74,210,397 		JBrowse link
G COL27A1 collagen type XXVII alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:254,768,576...254,924,893
Ensembl chr 1:254,770,093...254,923,823 		JBrowse link
G COL28A1 collagen type XXVIII alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:77,670,890...77,841,939
Ensembl chr 9:77,666,282...77,833,806 		JBrowse link
G COL2A1 collagen type II alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:3070812), (PMID:7276808), (PMID:8989518)
(PMID:11171689), (PMID:7590256), (PMID:9832566), (PMID:9915573)
(PMID:9022054)		 Ensembl
MGI
GO_Central		 PMID:3070812 PMID:7276808 PMID:7590256 PMID:8989518 PMID:9022054 More... GO_REF:0000033 GO_REF:0000107 NCBI chr 5:78,350,131...78,380,893
Ensembl chr 5:78,350,137...78,380,718 		JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9050868) Ensembl
MGI		 PMID:9050868 GO_REF:0000107 NCBI chr15:93,556,914...93,595,678
Ensembl chr15:93,526,603...93,596,363 		JBrowse link
G COL5A1 collagen type V alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15383546), (PMID:16492673), (PMID:17029294)
(PMID:17029294), (PMID:21467034)		 Ensembl
MGI
GO_Central		 PMID:15383546 PMID:16492673 PMID:17029294 PMID:21467034 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:273,934,219...274,083,264
Ensembl chr 1:273,971,971...274,085,111 		JBrowse link
G COL5A2 collagen type V alpha 2 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:93,611,856...93,981,131
Ensembl chr15:93,611,856...93,800,191 		JBrowse link
G COMP cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26746240)
(PMID:19808781)
(PMID:24312420)		 Ensembl
MGI		 PMID:19808781 PMID:24312420 PMID:26746240 GO_REF:0000107 NCBI chr 2:59,061,409...59,068,951
Ensembl chr 2:59,061,426...59,069,564 		JBrowse link
G CRTAP cartilage associated protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:18,994,371...19,040,297
Ensembl chr13:18,995,234...19,035,720 		JBrowse link
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:102,195,743...102,205,687
Ensembl chr 3:102,195,741...102,205,683 		JBrowse link
G DDR2 discoidin domain receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:87,749,738...87,911,818
Ensembl chr 4:87,756,168...87,911,296 		JBrowse link
G DPT dermatopontin involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:12230512), (PMID:16877395) Ensembl
MGI
GO_Central		 PMID:12230512 PMID:16877395 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:82,287,657...82,319,380
Ensembl chr 4:82,287,730...82,319,366 		JBrowse link
G ERO1A endoplasmic reticulum oxidoreductase 1 alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:28106121) MGI
Ensembl		 PMID:28106121 GO_REF:0000107 NCBI chr 1:182,268,651...182,318,147
Ensembl chr 1:182,265,261...182,318,195 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19850926) Ensembl
MGI		 PMID:19850926 GO_REF:0000107 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,610...20,935,540 		JBrowse link
G FKBP10 FKBP prolyl isomerase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24777781)
(PMID:28206698)		 Ensembl
MGI		 PMID:24777781 PMID:28206698 GO_REF:0000107 NCBI chr12:20,872,155...20,881,604
Ensembl chr12:20,872,158...20,882,644 		JBrowse link
G FMOD fibromodulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:64,062,995...64,073,853
Ensembl chr 9:64,063,001...64,073,858 		JBrowse link
G FOXC1 forkhead box C1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10767326) Ensembl
MGI		 PMID:10767326 GO_REF:0000107 NCBI chr 7:837,088...840,593
Ensembl chr 7:837,171...838,805 		JBrowse link
G FOXC2 forkhead box C2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10767326) Ensembl
MGI		 PMID:10767326 GO_REF:0000107 NCBI chr 6:2,552,141...2,555,041
Ensembl chr 6:2,552,862...2,554,367 		JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:136,617,041...136,629,293
Ensembl chr 1:136,617,105...136,629,292 		JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:10660670) MGI PMID:10660670 NCBI chr 1:267,207,273...267,290,862
Ensembl chr 1:267,207,419...267,287,729 		JBrowse link
G LOC100623720 collagen alpha-1(VI) chain acts_upstream_of_or_within ISO (PMID:25158062)
(PMID:28604699)		 MGI PMID:25158062 PMID:28604699 NCBI chr13:208,295,245...208,321,789
Ensembl chr13:208,295,451...208,313,127 		JBrowse link
G LOX lysyl oxidase acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:26700732) RGD
MGI
GO_Central
Ensembl		 PMID:16432278 PMID:16804742 PMID:26700732 GO_REF:0000033 GO_REF:0000107 RGD:1600668 RGD:1600669 NCBI chr 2:125,595,115...125,607,026
Ensembl chr 2:125,591,789...125,607,594 		JBrowse link
G LOXL1 lysyl oxidase like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:59,481,410...59,505,161
Ensembl chr 7:59,481,412...59,505,149 		JBrowse link
G LOXL2 lysyl oxidase like 2 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr14:7,435,861...7,540,699
Ensembl chr14:7,435,867...7,540,704 		JBrowse link
G LOXL3 lysyl oxidase like 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:68,498,114...68,516,829
Ensembl chr 3:68,498,189...68,517,445 		JBrowse link
G LOXL4 lysyl oxidase like 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:109,571,942...109,593,408
Ensembl chr14:109,571,947...109,589,160 		JBrowse link
G MIA3 MIA SH3 domain ER export factor 3 acts_upstream_of_or_within ISO (PMID:21606205) MGI PMID:21606205 NCBI chr10:11,362,489...11,428,844
Ensembl chr10:11,377,846...11,429,015 		JBrowse link
G MKX mohawk homeobox acts_upstream_of_or_within ISO (PMID:20696843) MGI PMID:20696843 NCBI chr10:39,096,778...39,173,384
Ensembl chr10:39,096,782...39,172,198 		JBrowse link
G MMP11 matrix metallopeptidase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18622425) Ensembl
MGI		 PMID:18622425 GO_REF:0000107 NCBI chr14:49,907,684...49,917,494
Ensembl chr14:49,907,687...49,912,617 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:10383727) MGI PMID:10383727 NCBI chr12:43,487,098...43,754,205
Ensembl chr12:43,489,813...43,753,969 		JBrowse link
G OPTC opticin involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:64,211,477...64,220,982
Ensembl chr 9:64,211,477...64,220,981 		JBrowse link
G P3H1 prolyl 3-hydroxylase 1 acts_upstream_of_or_within ISO (PMID:20363744) MGI PMID:20363744 NCBI chr 6:168,668,275...168,687,832
Ensembl chr 6:168,668,311...168,687,829 		JBrowse link
G P3H4 prolyl 3-hydroxylase family member 4 (inactive) involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:20,881,807...20,891,482
Ensembl chr12:20,882,344...20,891,484 		JBrowse link
G P4HA1 prolyl 4-hydroxylase subunit alpha 1 acts_upstream_of_or_within ISO (PMID:17135260) MGI PMID:17135260 NCBI chr14:75,827,207...75,919,121
Ensembl chr14:75,825,148...75,919,016 		JBrowse link
G PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16467571) Ensembl
MGI		 PMID:16467571 GO_REF:0000107 NCBI chr 3:8,911,787...8,919,525
Ensembl chr 3:8,911,791...8,919,516 		JBrowse link
G PXDN peroxidasin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:132,306,288...132,362,853
Ensembl chr 3:132,306,447...132,362,841 		JBrowse link
G SCX scleraxis bHLH transcription factor involved_in ISO (MGI:4413438|PMID:18802027)
(PMID:18802027)		 UniProt PMID:18802027 MGI:4413438 NCBI chr 4:500,884...503,276
Ensembl chr 4:500,526...503,193 		JBrowse link
G SELENON selenoprotein N acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:28106121) MGI
Ensembl		 PMID:28106121 GO_REF:0000107 NCBI chr 6:83,246,934...83,262,748
Ensembl chr 6:83,246,934...83,262,743 		JBrowse link
G SERPINF2 serpin family F member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:47,934,551...47,942,283
Ensembl chr12:47,933,864...47,942,285 		JBrowse link
G SERPINH1 serpin family H member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:22492985)
(PMID:10995453)		 Ensembl
MGI
GO_Central		 PMID:10995453 PMID:22492985 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:9,782,939...9,794,485
Ensembl chr 9:9,783,042...9,794,483 		JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19079247) Ensembl
MGI		 PMID:19079247 GO_REF:0000107 NCBI chr 8:75,337,311...75,345,926
Ensembl chr 8:75,337,144...75,345,921 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:8,306,136...8,435,307
Ensembl chr10:8,305,539...8,390,341 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15993878) Ensembl
MGI		 PMID:15993878 GO_REF:0000107 NCBI chr 1:240,842,735...240,918,267
Ensembl chr 1:240,860,156...240,918,528 		JBrowse link
G TNXB tenascin XB involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11925569)
(PMID:15194424)		 Ensembl
MGI		 PMID:11925569 PMID:15194424 GO_REF:0000107 NCBI chr 7:24,088,873...24,155,815
Ensembl chr 7:24,088,873...24,150,596 		JBrowse link
G VIPAS39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27435297) Ensembl
MGI		 PMID:27435297 GO_REF:0000107 NCBI chr 7:100,482,953...100,510,164
Ensembl chr 7:100,482,956...100,506,161 		JBrowse link
G VPS33B VPS33B late endosome and lysosome associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27435297) Ensembl
MGI		 PMID:27435297 GO_REF:0000107 NCBI chr 7:55,840,612...55,865,045
Ensembl chr 7:55,840,607...55,865,716 		JBrowse link
G ZNF469 zinc finger protein 469 acts_upstream_of_or_within ISO (PMID:34368841) MGI PMID:34368841 NCBI chr 6:1,161,514...1,208,406
Ensembl chr 6:1,162,822...1,174,257 		JBrowse link
elastic fiber assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:20889), (PMID:3385878), (PMID:937819)
(PMID:16338116)		 MGI PMID:20889 PMID:937819 PMID:3385878 PMID:16338116 NCBI chr  X:61,972,544...62,110,058
Ensembl chr  X:61,972,991...62,110,048 		JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in ISO (PMID:24820199) MGI PMID:24820199 NCBI chr15:93,556,914...93,595,678
Ensembl chr15:93,526,603...93,596,363 		JBrowse link
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19855011) Ensembl
MGI		 PMID:19855011 GO_REF:0000107 NCBI chr 2:6,455,155...6,463,493
Ensembl chr 2:6,450,332...6,463,486 		JBrowse link
G EMILIN1 elastin microfibril interfacer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:112,031,910...112,039,928
Ensembl chr 3:112,031,917...112,046,429 		JBrowse link
G FBLN5 fibulin 5 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:113,423,629...113,526,412
Ensembl chr 7:113,423,632...113,512,198 		JBrowse link
G LOX lysyl oxidase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23413430)
(PMID:12417550), (PMID:16192629)		 RGD
MGI
Ensembl		 PMID:12417550 PMID:16192629 PMID:16432278 PMID:23413430 GO_REF:0000107 RGD:1600669 NCBI chr 2:125,595,115...125,607,026
Ensembl chr 2:125,591,789...125,607,594 		JBrowse link
G LTBP4 latent transforming growth factor beta binding protein 4 involved_in ISO (MGI:5638486|PMID:25713297) UniProt PMID:25713297 MGI:5638486 NCBI chr 6:48,831,018...48,861,503
Ensembl chr 6:48,831,014...48,861,507 		JBrowse link
G MFAP4 microfibril associated protein 4 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr12:60,141,488...60,144,214
Ensembl chr12:60,137,566...60,144,207 		JBrowse link
G MYH11 myosin heavy chain 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:7,002,667...7,143,093
Ensembl chr 3:7,002,735...7,143,095 		JBrowse link
G THSD4 thrombospondin type 1 domain containing 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19940141) Ensembl
MGI		 PMID:19940141 GO_REF:0000107 NCBI chr 1:168,751,403...169,328,559
Ensembl chr 1:168,751,582...169,323,977 		JBrowse link
G TNXB tenascin XB involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:24,088,873...24,155,815
Ensembl chr 7:24,088,873...24,150,596 		JBrowse link
extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL1A2 collagen type I alpha 2 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22910579) Ensembl
MGI		 PMID:22910579 GO_REF:0000107 NCBI chr 9:74,174,484...74,210,407
Ensembl chr 9:74,173,931...74,210,397 		JBrowse link
G ELN elastin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:11,214,194...11,245,891
Ensembl chr 3:11,214,205...11,244,897 		JBrowse link
G FKBP10 FKBP prolyl isomerase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28774593) Ensembl
MGI		 PMID:28774593 GO_REF:0000107 NCBI chr12:20,872,155...20,881,604
Ensembl chr12:20,872,158...20,882,644 		JBrowse link
G GAS6 growth arrest specific 6 involved_in ISO PMID:18374201 UniProt PMID:18374201 RGD:8554638 NCBI chr11:78,848,797...78,880,733
Ensembl chr11:78,848,797...78,881,284 		JBrowse link
G GPM6B glycoprotein M6B involved_in ISO (PMID:21638316) UniProt PMID:21638316 NCBI chr  X:10,429,496...10,582,768
Ensembl chr  X:10,430,301...10,582,354 		JBrowse link
G HAPLN2 hyaluronan and proteoglycan link protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20181608) Ensembl
MGI		 PMID:20181608 GO_REF:0000107 NCBI chr 4:93,462,306...93,468,394
Ensembl chr 4:93,462,308...93,467,802 		JBrowse link
G HAS1 hyaluronan synthase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:58,303,274...58,313,486
Ensembl chr 6:58,302,799...58,313,486 		JBrowse link
G HAS3 hyaluronan synthase 3 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:17,844,974...17,870,331
Ensembl chr 6:17,843,882...17,853,210 		JBrowse link
G LOC100623720 collagen alpha-1(VI) chain acts_upstream_of_or_within ISO (PMID:19114551) MGI PMID:19114551 NCBI chr13:208,295,245...208,321,789
Ensembl chr13:208,295,451...208,313,127 		JBrowse link
G LOC100737755 hyaluronan synthase 2-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:17,648,345...17,674,204
Ensembl chr 4:17,655,948...17,675,586 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,707,026...73,826,529
Ensembl chr 5:73,707,050...73,826,430 		JBrowse link
G QSOX1 quiescin sulfhydryl oxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:121,779,072...121,822,829
Ensembl chr 9:121,779,792...121,822,825 		JBrowse link
G SHAS2 hyaluronan synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:17,583,154...17,613,524
Ensembl chr 4:17,596,492...17,615,480 		JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22910579) Ensembl
MGI		 PMID:22910579 GO_REF:0000107 NCBI chr 6:28,938,287...29,025,397
Ensembl chr 6:28,938,290...29,025,357 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:20881014) Ensembl
MGI		 PMID:20881014 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046 		JBrowse link
extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCN2 cellular communication network factor 2 ISO positive regulation RGD PMID:18613219 RGD:2314619 NCBI chr 1:31,674,398...31,677,697
Ensembl chr 1:31,674,394...31,677,691 		JBrowse link
G CREB3L1 cAMP responsive element binding protein 3 like 1 involved_in ISO (MGI:4438316|PMID:19767743)
(PMID:19767743)		 UniProt PMID:19767743 MGI:4438316 NCBI chr 2:16,186,206...16,220,948
Ensembl chr 2:16,186,206...16,220,940 		JBrowse link
G ENG endoglin ISO RGD PMID:15539634 RGD:1601032 NCBI chr 1:268,309,379...268,343,861
Ensembl chr 1:268,309,400...268,343,783 		JBrowse link
G TMEM38B transmembrane protein 38B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27188440) Ensembl
MGI		 PMID:27188440 GO_REF:0000107 NCBI chr 1:246,973,447...247,024,019
Ensembl chr 1:246,973,436...247,027,527 		JBrowse link
G ZNF469 zinc finger protein 469 acts_upstream_of_or_within ISO (PMID:34368841) MGI PMID:34368841 NCBI chr 6:1,161,514...1,208,406
Ensembl chr 6:1,162,822...1,174,257 		JBrowse link
extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS15 ADAM metallopeptidase with thrombospondin type 1 motif 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:57,127,527...57,152,550
Ensembl chr 9:57,127,442...57,152,547 		JBrowse link
G ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:190,353,019...190,413,110
Ensembl chr13:190,361,744...190,413,110 		JBrowse link
G CAPG capping actin protein, gelsolin like NOT|involved_in ISO (PMID:24236012) UniProt PMID:24236012 NCBI chr 3:59,335,483...59,366,855
Ensembl chr 3:59,339,966...59,366,846 		JBrowse link
G ENG endoglin involved_in ISO (PMID:18223685) BHF-UCL PMID:18223685 NCBI chr 1:268,309,379...268,343,861
Ensembl chr 1:268,309,400...268,343,783 		JBrowse link
G EXOC8 exocyst complex component 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:59,192,345...59,197,550
Ensembl chr14:59,192,434...59,197,542 		JBrowse link
G FLOT1 flotillin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:23,253,157...23,265,165
Ensembl chr 7:23,253,162...23,265,106 		JBrowse link
G GSN gelsolin NOT|involved_in ISO (PMID:24236012) UniProt PMID:24236012 NCBI chr 1:261,295,711...261,372,848
Ensembl chr 1:261,307,008...261,372,848 		JBrowse link
G KIF9 kinesin family member 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:30,014,468...30,062,871
Ensembl chr13:30,014,991...30,063,073 		JBrowse link
G KLK4 kallikrein related peptidase 4 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:22243248) Ensembl
GO_Central
MGI		 PMID:22243248 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:55,589,997...55,617,514
Ensembl chr 6:55,589,999...55,594,294 		JBrowse link
G KLK5 kallikrein related peptidase 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:55,618,094...55,627,518
Ensembl chr 6:55,617,823...55,630,036 		JBrowse link
G LAMC1 laminin subunit gamma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:124,283,668...124,405,967
Ensembl chr 9:124,283,224...124,405,964 		JBrowse link
G LCP1 lymphocyte cytosolic protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:21,126,504...21,223,543
Ensembl chr11:21,126,539...21,223,550 		JBrowse link
G MMP13 matrix metallopeptidase 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:33,549,003...33,616,700
Ensembl chr 9:33,549,008...33,561,162 		JBrowse link
G MMP20 matrix metallopeptidase 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22243248) Ensembl
MGI		 PMID:22243248 GO_REF:0000107 NCBI chr 9:33,261,448...33,308,047
Ensembl chr 9:33,261,443...33,308,047 		JBrowse link
G NOXO1 NADPH oxidase organizer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:39,987,340...39,989,640
Ensembl chr 3:39,987,384...39,989,548 		JBrowse link
G PBXIP1 PBX homeobox interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:94,837,365...94,847,652
Ensembl chr 4:94,832,270...94,847,648 		JBrowse link
G PLG plasminogen involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:7,062,399...7,109,521
Ensembl chr 1:7,061,192...7,110,555 		JBrowse link
G SH3PXD2B SH3 and PX domains 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:51,733,170...51,858,774
Ensembl chr16:51,733,135...51,858,772 		JBrowse link
G WASHC1 WASH complex subunit 1 involved_in ISO (PMID:24344185) UniProt PMID:24344185 NCBI chr 5:67,395,737...67,412,408
Ensembl chr 5:67,394,875...67,412,431 		JBrowse link
G WDR72 WD repeat domain 72 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26247047) Ensembl
MGI		 PMID:26247047 GO_REF:0000107 NCBI chr 1:117,946,022...118,161,827
Ensembl chr 1:117,946,048...118,160,286 		JBrowse link
extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI3BP ABI family member 3 binding protein involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:18757743) Ensembl
MGI
GO_Central		 PMID:18757743 GO_REF:0000033 GO_REF:0000107 NCBI chr13:158,013,704...158,291,093
Ensembl chr13:158,013,726...158,291,103 		JBrowse link
G ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr13:190,277,175...190,285,957
Ensembl chr13:190,276,430...190,286,214 		JBrowse link
G ADAMTS10 ADAM metallopeptidase with thrombospondin type 1 motif 10 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 2:70,734,234...70,751,205
Ensembl chr 2:70,730,172...70,751,837 		JBrowse link
G ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif 12 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr16:19,547,003...19,920,780
Ensembl chr16:19,547,011...19,920,513 		JBrowse link
G ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif 13 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:273,022,014...273,066,916
Ensembl chr 1:273,024,009...273,056,039 		JBrowse link
G ADAMTS14 ADAM metallopeptidase with thrombospondin type 1 motif 14 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr14:73,565,158...73,657,257
Ensembl chr14:73,538,090...73,653,560 		JBrowse link
G ADAMTS15 ADAM metallopeptidase with thrombospondin type 1 motif 15 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 9:57,127,527...57,152,550
Ensembl chr 9:57,127,442...57,152,547 		JBrowse link
G ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif 16 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr16:76,326,718...76,491,050
Ensembl chr16:76,326,721...76,491,003 		JBrowse link
G ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif 17 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:138,619,701...139,015,681
Ensembl chr 1:138,619,706...139,015,473 		JBrowse link
G ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif 18 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 6:10,488,504...10,652,508
Ensembl chr 6:10,328,944...10,652,504 		JBrowse link
G ADAMTS19 ADAM metallopeptidase with thrombospondin type 1 motif 19 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 2:132,145,266...132,413,116
Ensembl chr 2:132,145,310...132,409,915 		JBrowse link
G ADAMTS2 ADAM metallopeptidase with thrombospondin type 1 motif 2 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 2:79,182,901...79,406,879
Ensembl chr 2:79,182,943...79,406,875 		JBrowse link
G ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif 20 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:18454205) Ensembl
MGI
GO_Central
InterPro		 PMID:18454205 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:74,502,098...74,672,703
Ensembl chr 5:74,503,116...74,672,733 		JBrowse link
G ADAMTS3 ADAM metallopeptidase with thrombospondin type 1 motif 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:68,675,067...68,948,537
Ensembl chr 8:68,675,070...68,948,414 		JBrowse link
G ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 4:89,260,354...89,269,238
Ensembl chr 4:89,260,461...89,269,244 		JBrowse link
G ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif 5 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr13:190,353,019...190,413,110
Ensembl chr13:190,361,744...190,413,110 		JBrowse link
G ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif 6 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr16:43,702,519...44,010,820
Ensembl chr16:43,702,521...44,019,704 		JBrowse link
G ADAMTS7 ADAM metallopeptidase with thrombospondin type 1 motif 7 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 7:47,919,398...47,994,528
Ensembl chr 7:47,929,033...47,994,453 		JBrowse link
G ADAMTS8 ADAM metallopeptidase with thrombospondin type 1 motif 8 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 9:57,090,313...57,113,077
Ensembl chr 9:57,090,617...57,110,414 		JBrowse link
G ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr13:46,033,753...46,209,238
Ensembl chr13:46,034,833...46,207,006 		JBrowse link
G ADAMTSL1 ADAMTS like 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:203,936,654...204,944,236
Ensembl chr 1:203,936,657...204,942,412 		JBrowse link
G ADAMTSL2 ADAMTS like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25762570) Ensembl
MGI
InterPro		 PMID:25762570 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:273,119,826...273,155,412
Ensembl chr 1:273,119,904...273,155,409 		JBrowse link
G ADAMTSL3 ADAMTS like 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:51,006,356...51,363,855
Ensembl chr 7:51,006,366...51,363,620 		JBrowse link
G ADAMTSL4 ADAMTS like 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 4:98,577,813...98,589,255
Ensembl chr 4:98,577,823...98,589,180 		JBrowse link
G ADAMTSL5 ADAMTS like 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:76,966,155...76,975,555
Ensembl chr 2:76,966,766...76,975,820 		JBrowse link
G AGT angiotensinogen acts_upstream_of_or_within ISO (PMID:9734405) MGI PMID:9734405 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833 		JBrowse link
G APBB1 amyloid beta precursor protein binding family B member 1 acts_upstream_of_or_within ISO (PMID:16407979) MGI PMID:16407979 NCBI chr 9:3,303,032...3,323,828
Ensembl chr 9:3,303,112...3,324,037 		JBrowse link
G APBB2 amyloid beta precursor protein binding family B member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16407979) Ensembl
MGI		 PMID:16407979 GO_REF:0000107 NCBI chr 8:31,921,587...32,302,237
Ensembl chr 8:31,921,593...32,193,940 		JBrowse link
G APLP1 amyloid beta precursor like protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15385965) Ensembl
MGI		 PMID:15385965 GO_REF:0000107 NCBI chr 6:45,285,698...45,295,355
Ensembl chr 6:45,285,718...45,295,350 		JBrowse link
G APLP2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO (PMID:15385965) MGI PMID:15385965 NCBI chr 9:56,798,781...56,871,849
Ensembl chr 9:56,798,810...56,872,642 		JBrowse link
G APP amyloid beta precursor protein involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:15385965) UniProt
MGI
Ensembl		 PMID:15385965 GO_REF:0000024 GO_REF:0000107 NCBI chr13:189,434,854...189,716,120
Ensembl chr13:189,435,094...189,716,056 		JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:1115218) MGI PMID:1115218 NCBI chr  X:61,972,544...62,110,058
Ensembl chr  X:61,972,991...62,110,048 		JBrowse link
G ATXN1L ataxin 1 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22014525) Ensembl
MGI		 PMID:22014525 GO_REF:0000107 NCBI chr 6:14,836,732...14,848,474
Ensembl chr 6:14,836,752...14,848,422 		JBrowse link
G B4GALT1 beta-1,4-galactosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11900463) Ensembl
MGI		 PMID:11900463 GO_REF:0000107 NCBI chr10:33,317,295...33,381,285
Ensembl chr10:33,317,305...33,381,285 		JBrowse link
G BCL3 BCL3 transcription coactivator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10586052) Ensembl
MGI		 PMID:10586052 GO_REF:0000107 NCBI chr 6:51,256,033...51,264,923
Ensembl chr 6:51,256,033...51,265,351 		JBrowse link
G C7H6orf15 chromosome 7 C6orf15 homolog acts_upstream_of_or_within ISO (PMID:18757743) MGI PMID:18757743 NCBI chr 7:23,515,637...23,516,912
Ensembl chr 7:23,515,637...23,516,912 		JBrowse link
G CCDC80 coiled-coil domain containing 80 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:18757743) Ensembl
MGI
GO_Central		 PMID:18757743 GO_REF:0000033 GO_REF:0000107 NCBI chr13:147,203,333...147,244,753
Ensembl chr13:147,207,598...147,245,994 		JBrowse link
G CCN1 cellular communication network factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 4:130,392,404...130,395,179
Ensembl chr 4:130,392,407...130,395,150 		JBrowse link
G COL10A1 collagen type X alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:81,766,829...81,773,818
Ensembl chr 1:81,765,859...81,773,818 		JBrowse link
G COL11A1 collagen type XI alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:115,638,381...115,841,679
Ensembl chr 4:115,634,172...115,840,708 		JBrowse link
G COL13A1 collagen type XIII alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:72,786,780...72,953,093
Ensembl chr14:72,787,303...72,953,095 		JBrowse link
G COL15A1 collagen type XV alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:240,718,128...240,829,188
Ensembl chr 1:240,709,086...240,829,185 		JBrowse link
G COL16A1 collagen type XVI alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:88,177,798...88,243,718
Ensembl chr 6:88,177,816...88,242,747 		JBrowse link
G COL17A1 collagen type XVII alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:114,959,404...115,007,734
Ensembl chr14:114,959,411...115,064,783 		JBrowse link
G COL18A1 collagen type XVIII alpha 1 chain acts_upstream_of_or_within ISO (PMID:15254016) MGI PMID:15254016 NCBI chr13:207,907,835...207,984,082
Ensembl chr13:207,940,948...207,982,938 		JBrowse link
G COL19A1 collagen type XIX alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:15302855) Ensembl
GO_Central
MGI		 PMID:15302855 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:50,044,394...50,402,256
Ensembl chr 1:50,045,065...50,399,969 		JBrowse link
G COL1A1 collagen type I alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:26,379,087...26,397,180
Ensembl chr12:26,379,090...26,397,004 		JBrowse link
G COL1A2 collagen type I alpha 2 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:74,174,484...74,210,407
Ensembl chr 9:74,173,931...74,210,397 		JBrowse link
G COL22A1 collagen type XXII alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:4,069,045...4,313,198
Ensembl chr 4:4,069,076...4,313,195 		JBrowse link
G COL23A1 collagen type XXIII alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:79,766,260...80,141,296
Ensembl chr 2:79,766,150...80,141,293 		JBrowse link
G COL26A1 collagen type XXVI alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:9,003,126...9,164,074
Ensembl chr 3:9,003,743...9,158,130 		JBrowse link
G COL27A1 collagen type XXVII alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22206015) Ensembl
MGI		 PMID:22206015 GO_REF:0000107 NCBI chr 1:254,768,576...254,924,893
Ensembl chr 1:254,770,093...254,923,823 		JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:93,556,914...93,595,678
Ensembl chr15:93,526,603...93,596,363 		JBrowse link
G COL4A2 collagen type IV alpha 2 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:76,996,885...77,161,617
Ensembl chr11:76,997,516...77,161,614 		JBrowse link
G COL4A3 collagen type IV alpha 3 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:128,611,640...128,763,331
Ensembl chr15:128,611,866...128,763,122 		JBrowse link
G COL4A6 collagen type IV alpha 6 chain involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:10965041) Ensembl
GO_Central
MGI		 PMID:10965041 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:88,634,925...88,750,938
Ensembl chr  X:88,634,930...88,957,416 		JBrowse link
G COL5A2 collagen type V alpha 2 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:93,611,856...93,981,131
Ensembl chr15:93,611,856...93,800,191 		JBrowse link
G COL5A3 collagen type V alpha 3 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:68,828,197...68,869,914
Ensembl chr 2:68,827,562...68,869,888 		JBrowse link
G COL7A1 collagen type VII alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:31,262,750...31,295,112 JBrowse link
G COL8A2 collagen type VIII alpha 2 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:92,246,047...92,272,046
Ensembl chr 6:92,247,171...92,271,529 		JBrowse link
G COL9A1 collagen type IX alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:50,403,355...50,498,356
Ensembl chr 1:50,403,361...50,498,332 		JBrowse link
G COL9A2 collagen type IX alpha 2 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:96,065,282...96,081,547 JBrowse link
G COL9A3 collagen type IX alpha 3 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:62,074,108...62,094,228
Ensembl chr17:62,074,855...62,093,703 		JBrowse link
G COLQ collagen like tail subunit of asymmetric acetylcholinesterase involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:2,677,738...2,755,635
Ensembl chr13:2,677,740...2,755,307 		JBrowse link
G CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 6:3,881,715...3,944,592
Ensembl chr 6:3,881,725...3,944,583 		JBrowse link
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 acts_upstream_of_or_within ISO (PMID:21148564) MGI PMID:21148564 NCBI chr17:12,145,141...12,498,777
Ensembl chr17:12,428,893...12,498,585 		JBrowse link
G DMP1 dentin matrix acidic phosphoprotein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:18757743) Ensembl
MGI
GO_Central
InterPro		 PMID:18757743 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:131,285,238...131,319,398
Ensembl chr 8:131,285,330...131,313,130 		JBrowse link
G DNAJB6 DnaJ heat shock protein family (Hsp40) member B6 acts_upstream_of_or_within ISO (PMID:21972064) MGI PMID:21972064 NCBI chr18:1,444,737...1,499,904
Ensembl chr18:1,444,739...1,499,887 		JBrowse link
G ECM2 extracellular matrix protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 3:42,205,246...42,243,746
Ensembl chr 3:42,203,171...42,243,547 		JBrowse link
G EGFL6 EGF like domain multiple 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr  X:10,218,108...10,284,152
Ensembl chr  X:10,217,924...10,283,810 		JBrowse link
G EGFLAM EGF like, fibronectin type III and laminin G domains involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr16:23,402,937...23,606,234
Ensembl chr16:23,509,491...23,606,924 		JBrowse link
G ELF3 E74 like ETS transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11984530) Ensembl
MGI		 PMID:11984530 GO_REF:0000107 NCBI chr10:24,237,852...24,242,266
Ensembl chr10:24,237,875...24,243,058 		JBrowse link
G ELN elastin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 3:11,214,194...11,245,891
Ensembl chr 3:11,214,205...11,244,897 		JBrowse link
G EMILIN1 elastin microfibril interfacer 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 3:112,031,910...112,039,928
Ensembl chr 3:112,031,917...112,046,429 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9651581) Ensembl
MGI		 PMID:9651581 GO_REF:0000107 NCBI chr 6:51,734,318...51,757,508
Ensembl chr 6:51,734,320...51,757,553 		JBrowse link
G ERO1A endoplasmic reticulum oxidoreductase 1 alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22981861) Ensembl
MGI		 PMID:22981861 GO_REF:0000107 NCBI chr 1:182,268,651...182,318,147
Ensembl chr 1:182,265,261...182,318,195 		JBrowse link
G ERO1B endoplasmic reticulum oxidoreductase 1 beta acts_upstream_of_or_within ISO (PMID:22981861) MGI PMID:22981861 NCBI chr14:55,056,756...55,122,182
Ensembl chr14:55,057,059...55,122,171 		JBrowse link
G FBLN1 fibulin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:18757743) Ensembl
MGI
GO_Central
InterPro		 PMID:18757743 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:3,839,498...3,927,178
Ensembl chr 5:3,839,502...3,927,183 		JBrowse link
G FBLN5 fibulin 5 acts_upstream_of_or_within ISO (PMID:18757743) MGI PMID:18757743 NCBI chr 7:113,423,629...113,526,412
Ensembl chr 7:113,423,632...113,512,198 		JBrowse link
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31296900) Ensembl
MGI		 PMID:31296900 GO_REF:0000107 NCBI chr 6:52,627,466...52,639,255
Ensembl chr 6:52,627,471...52,639,253 		JBrowse link
G FN1 fibronectin 1 ISO RGD PMID:12388756 RGD:1358623 NCBI chr15:117,658,158...117,737,145
Ensembl chr15:117,658,099...117,731,014 		JBrowse link
G FOXF1 forkhead box F1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16439479) Ensembl
MGI		 PMID:16439479 GO_REF:0000107 NCBI chr 6:2,579,348...2,598,122
Ensembl chr 6:2,592,993...2,597,659 		JBrowse link
G FOXF2 forkhead box F2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16439479) Ensembl
MGI		 PMID:16439479 GO_REF:0000107 NCBI chr 7:715,001...719,781
Ensembl chr 7:715,001...720,104 		JBrowse link
G GFAP glial fibrillary acidic protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11487638) Ensembl
MGI		 PMID:11487638 GO_REF:0000107 NCBI chr12:18,456,268...18,466,594
Ensembl chr12:18,456,263...18,466,592 		JBrowse link
G GFOD2 Gfo/Idh/MocA-like oxidoreductase domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:18757743) Ensembl
MGI
GO_Central		 PMID:18757743 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:28,293,957...28,348,197
Ensembl chr 6:28,293,967...28,348,161 		JBrowse link
G HPSE2 heparanase 2 (inactive) involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:25510506) Ensembl
MGI
GO_Central		 PMID:25510506 GO_REF:0000033 GO_REF:0000107 NCBI chr14:109,764,511...110,469,064
Ensembl chr14:109,764,170...110,469,141 		JBrowse link
G HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 2:18,461,487...18,611,761
Ensembl chr 2:18,456,019...18,611,782 		JBrowse link
G HSPG2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO (PMID:10579729) MGI PMID:10579729 NCBI chr 6:79,849,691...79,958,283
Ensembl chr 6:79,849,698...79,958,334 		JBrowse link
G IBSP integrin binding sialoprotein involved_in
acts_upstream_of_or_within		 ISS
ISO
IBA
IEA		 (PMID:18757743) UniProt
MGI
GO_Central
Ensembl		 PMID:18757743 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:131,208,281...131,222,048
Ensembl chr 8:131,208,282...131,241,266 		JBrowse link
G IDUA alpha-L-iduronidase acts_upstream_of_or_within ISO (PMID:25410057) MGI PMID:25410057 NCBI chr 8:334,604...351,970
Ensembl chr 8:334,617...351,969 		JBrowse link
G IMPG1 interphotoreceptor matrix proteoglycan 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32265257) Ensembl
MGI		 PMID:32265257 GO_REF:0000107 NCBI chr 1:89,836,013...89,986,530
Ensembl chr 1:89,836,050...89,987,397 		JBrowse link
G IMPG2 interphotoreceptor matrix proteoglycan 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32265257) Ensembl
MGI		 PMID:32265257 GO_REF:0000107 NCBI chr13:157,672,973...157,763,817
Ensembl chr13:157,675,265...157,759,266 		JBrowse link
G ITGA8 integrin subunit alpha 8 acts_upstream_of_or_within ISO (PMID:10742111) MGI PMID:10742111 NCBI chr10:46,132,887...46,303,659
Ensembl chr10:46,132,913...46,303,343 		JBrowse link
G ITIH1 inter-alpha-trypsin inhibitor heavy chain 1 acts_upstream_of_or_within ISO (PMID:17675295) MGI PMID:17675295 NCBI chr13:34,892,335...34,906,378
Ensembl chr13:34,892,369...34,906,664 		JBrowse link
G KAZALD1 Kazal type serine peptidase inhibitor domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr14:112,142,746...112,146,538
Ensembl chr14:112,142,745...112,153,961 		JBrowse link
G LGALS3 galectin 3 acts_upstream_of_or_within ISO (PMID:15800063) MGI PMID:15800063 NCBI chr 1:184,478,639...184,496,155
Ensembl chr 1:184,478,710...184,497,951 		JBrowse link
G MANSC4 MANSC domain containing 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:45,962,175...45,970,957
Ensembl chr 5:45,955,090...45,970,274 		JBrowse link
G MATN3 matrilin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:118,185,928...118,206,465
Ensembl chr 3:118,185,975...118,205,558 		JBrowse link
G MIA MIA SH3 domain containing acts_upstream_of_or_within ISO (PMID:11839810) MGI PMID:11839810 NCBI chr 6:48,986,232...49,010,042
Ensembl chr 6:48,986,733...48,988,432 		JBrowse link
G MMP1 matrix metallopeptidase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:33,411,738...33,420,205
Ensembl chr 9:33,411,065...33,420,076 		JBrowse link
G MMP11 matrix metallopeptidase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:18622425) Ensembl
MGI
GO_Central		 PMID:18622425 GO_REF:0000033 GO_REF:0000107 NCBI chr14:49,907,684...49,917,494
Ensembl chr14:49,907,687...49,912,617 		JBrowse link
G MMP12 matrix metallopeptidase 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:33,473,625...33,483,630
Ensembl chr 9:33,473,093...33,483,679 		JBrowse link
G MMP13 matrix metallopeptidase 13 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:33,549,003...33,616,700
Ensembl chr 9:33,549,008...33,561,162 		JBrowse link
G MMP14 matrix metallopeptidase 14 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:76,174,502...76,185,931
Ensembl chr 7:76,172,971...76,185,928 		JBrowse link
G MMP16 matrix metallopeptidase 16 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:48,556,826...48,867,959
Ensembl chr 4:48,556,967...48,862,985 		JBrowse link
G MMP17 matrix metallopeptidase 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:23,481,220...23,506,936
Ensembl chr14:23,481,227...23,506,919 		JBrowse link
G MMP19 matrix metallopeptidase 19 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:21,279,514...21,285,943
Ensembl chr 5:21,280,130...21,285,774 		JBrowse link
G MMP20 matrix metallopeptidase 20 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:33,261,448...33,308,047
Ensembl chr 9:33,261,443...33,308,047 		JBrowse link
G MMP23 matrix metallopeptidase 23 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:63,801,668...63,804,275
Ensembl chr 6:63,801,965...63,805,046 		JBrowse link
G MMP24 matrix metallopeptidase 24 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:38,587,230...38,636,628
Ensembl chr17:38,588,081...38,636,627 		JBrowse link
G MMP25 matrix metallopeptidase 25 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:39,129,452...39,143,621
Ensembl chr 3:39,130,777...39,142,303 		JBrowse link
G MMP27 matrix metallopeptidase 27 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:33,366,342...33,379,828
Ensembl chr 9:33,366,345...33,379,789 		JBrowse link
G MMP28 matrix metallopeptidase 28 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:39,739,074...39,766,794
Ensembl chr12:39,739,630...39,766,791 		JBrowse link
G MMP7 matrix metallopeptidase 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:33,214,590...33,225,080
Ensembl chr 9:33,214,594...33,225,080 		JBrowse link
G MMP8 matrix metallopeptidase 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:33,384,034...33,397,637
Ensembl chr 9:33,384,033...33,396,947 		JBrowse link
G MMP9 matrix metallopeptidase 9 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15800063) Ensembl
MGI
GO_Central		 PMID:15800063 GO_REF:0000033 GO_REF:0000107 NCBI chr17:48,179,690...48,186,782
Ensembl chr17:48,179,671...48,186,788 		JBrowse link
G MPZL3 myelin protein zero like 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15482472) Ensembl
MGI		 PMID:15482472 GO_REF:0000107 NCBI chr 9:45,536,024...45,564,210
Ensembl chr 9:45,536,028...45,564,194 		JBrowse link
G MYF5 myogenic factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16554364) Ensembl
MGI		 PMID:16554364 GO_REF:0000107 NCBI chr 5:100,753,440...100,755,558
Ensembl chr 5:100,752,890...100,755,494 		JBrowse link
G NDNF neuron derived neurotrophic factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 8:103,047,783...103,094,800
Ensembl chr 8:102,996,281...103,088,230 		JBrowse link
G NEPN nephrocan involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:44,204,855...44,230,097 JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:16835260) MGI PMID:16835260 NCBI chr12:43,487,098...43,754,205
Ensembl chr12:43,489,813...43,753,969 		JBrowse link
G NFKB2 nuclear factor kappa B subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10586052) Ensembl
MGI		 PMID:10586052 GO_REF:0000107 NCBI chr14:113,406,412...113,414,177
Ensembl chr14:113,406,004...113,414,169 		JBrowse link
G NID1 nidogen 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr14:55,239,327...55,346,948
Ensembl chr14:55,239,577...55,390,782 		JBrowse link
G NOX1 NADPH oxidase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16386251) Ensembl
MGI		 PMID:16386251 GO_REF:0000107 NCBI chr  X:82,540,664...82,575,811
Ensembl chr  X:82,540,667...82,586,532 		JBrowse link
G NPHP3 nephrocystin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7539536) Ensembl
MGI		 PMID:7539536 GO_REF:0000107 NCBI chr13:73,843,770...73,901,020
Ensembl chr13:73,858,427...73,900,967 		JBrowse link
G NPNT nephronectin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 8:115,768,963...115,861,170
Ensembl chr 8:115,779,840...115,861,137 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16424942) Ensembl
MGI		 PMID:16424942 GO_REF:0000107 NCBI chr 1:74,266,667...74,292,686
Ensembl chr 1:74,271,042...74,292,681 		JBrowse link
G OLFML2A olfactomedin like 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 1:265,577,250...265,604,365
Ensembl chr 1:265,577,704...265,604,502 		JBrowse link
G OLFML2B olfactomedin like 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 4:88,522,171...88,560,305
Ensembl chr 4:88,522,240...88,560,306 		JBrowse link
G PAPLN papilin, proteoglycan like sulfated glycoprotein involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:96,584,894...96,622,487
Ensembl chr 7:96,598,584...96,625,052 		JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15543606) Ensembl
MGI		 PMID:15543606 GO_REF:0000107 NCBI chr 8:40,966,568...41,021,440
Ensembl chr 8:40,967,493...41,021,441 		JBrowse link
G POMT1 protein O-mannosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15383666) Ensembl
MGI		 PMID:15383666 GO_REF:0000107 NCBI chr 1:271,432,196...271,448,584
Ensembl chr 1:271,432,210...271,452,461 		JBrowse link
G POSTN periostin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16314533) Ensembl
MGI		 PMID:16314533 GO_REF:0000107 NCBI chr11:13,225,183...13,258,973
Ensembl chr11:13,224,959...13,258,978 		JBrowse link
G PRDX4 peroxiredoxin 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22981861) Ensembl
MGI		 PMID:22981861 GO_REF:0000107 NCBI chr  X:19,800,153...19,819,575
Ensembl chr  X:19,797,550...19,819,571 		JBrowse link
G PTK2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:14642275) MGI PMID:14642275 NCBI chr 4:2,656,606...2,896,060
Ensembl chr 4:2,656,614...2,896,054 		JBrowse link
G PTX3 pentraxin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17675295) Ensembl
MGI		 PMID:17675295 GO_REF:0000107 NCBI chr13:97,273,594...97,279,570
Ensembl chr13:97,273,594...97,279,569 		JBrowse link
G PXDN peroxidasin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:132,306,288...132,362,853
Ensembl chr 3:132,306,447...132,362,841 		JBrowse link
G RECK reversion inducing cysteine rich protein with kazal motifs involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:11747814) Ensembl
MGI
GO_Central		 PMID:11747814 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:236,821,243...236,898,280
Ensembl chr 1:236,821,414...236,898,276 		JBrowse link
G RXFP1 relaxin family peptide receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15256493) Ensembl
MGI		 PMID:15256493 GO_REF:0000107 NCBI chr 8:47,473,465...47,603,332
Ensembl chr 8:47,473,788...47,601,357 		JBrowse link
G SCARA3 scavenger receptor class A member 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:11,367,402...11,403,173
Ensembl chr14:11,367,427...11,410,978 		JBrowse link
G SERAC1 serine active site containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 1:8,935,081...9,002,774
Ensembl chr 1:8,935,091...9,002,770 		JBrowse link
G SERPINB5 serpin family B member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18593913) Ensembl
MGI		 PMID:18593913 GO_REF:0000107 NCBI chr 1:158,167,756...158,195,896
Ensembl chr 1:158,167,646...158,195,796 		JBrowse link
G SLC39A8 solute carrier family 39 member 8 acts_upstream_of
involved_in		 ISO
IEA		 (PMID:29337306)
(MGI:6117959|PMID:29337306)		 UniProt
Ensembl		 PMID:29337306 GO_REF:0000107 MGI:6117959 NCBI chr 8:118,604,852...118,678,115
Ensembl chr 8:118,605,402...118,678,107 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (PMID:18267097) MGI PMID:18267097 NCBI chr 2:69,717,175...69,810,301
Ensembl chr 2:69,662,238...69,810,295 		JBrowse link
G SMOC1 SPARC related modular calcium binding 1 acts_upstream_of_or_within ISO (PMID:18757743) MGI PMID:18757743 NCBI chr 7:93,480,064...93,628,332
Ensembl chr 7:93,480,159...93,628,328 		JBrowse link
G SMOC2 SPARC related modular calcium binding 2 acts_upstream_of_or_within ISO (PMID:18757743) MGI PMID:18757743 NCBI chr 1:1,193,163...1,332,739
Ensembl chr 1:1,193,167...1,332,694 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17350610)
(PMID:24191021)		 Ensembl
MGI		 PMID:17350610 PMID:24191021 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G SPINT1 serine peptidase inhibitor, Kunitz type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:17174946) Ensembl
MGI
GO_Central		 PMID:17174946 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:130,458,909...130,473,791
Ensembl chr 1:130,458,909...130,473,783 		JBrowse link
G SPOCK2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr14:74,938,164...74,968,126
Ensembl chr14:74,938,166...74,968,018 		JBrowse link
G TGFB2 transforming growth factor beta 2 acts_upstream_of_or_within ISO (PMID:11784073), (PMID:15528466) MGI PMID:11784073 PMID:15528466 NCBI chr10:8,306,136...8,435,307
Ensembl chr10:8,305,539...8,390,341 		JBrowse link
G TGFBI transforming growth factor beta induced involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:18757743) Ensembl
GO_Central
MGI		 PMID:18757743 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:138,191,793...138,225,373
Ensembl chr 2:138,191,807...138,225,366 		JBrowse link
G THSD4 thrombospondin type 1 domain containing 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:168,751,403...169,328,559
Ensembl chr 1:168,751,582...169,323,977 		JBrowse link
G TNF tumor necrosis factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15381731) Ensembl
MGI		 PMID:15381731 GO_REF:0000107 NCBI chr 7:23,699,635...23,702,393
Ensembl chr 7:23,699,628...23,702,416 		JBrowse link
G TNFRSF11B TNF receptor superfamily member 11b involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 4:19,850,212...19,879,132
Ensembl chr 4:19,850,350...19,879,125 		JBrowse link
G TNR tenascin R involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10341229), (PMID:11077416), (PMID:16870730) Ensembl
MGI		 PMID:10341229 PMID:11077416 PMID:16870730 GO_REF:0000107 NCBI chr 9:117,365,930...117,790,332
Ensembl chr 9:117,373,545...117,771,224 		JBrowse link
G TNXB tenascin XB involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15242785) Ensembl
MGI		 PMID:15242785 GO_REF:0000107 NCBI chr 7:24,088,873...24,155,815
Ensembl chr 7:24,088,873...24,150,596 		JBrowse link
G VHL von Hippel-Lindau tumor suppressor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16537898) Ensembl
MGI		 PMID:16537898 GO_REF:0000107 NCBI chr13:66,334,535...66,342,401
Ensembl chr13:66,334,591...66,342,654 		JBrowse link
G VIT vitrin involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:18757743) Ensembl
MGI
GO_Central		 PMID:18757743 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:103,379,127...103,492,989
Ensembl chr 3:103,377,575...103,492,985 		JBrowse link
G VTN vitronectin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr12:44,650,532...44,653,916
Ensembl chr12:44,650,534...44,655,355 		JBrowse link
G VWA1 von Willebrand factor A domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743)
(PMID:19279005)		 Ensembl
MGI		 PMID:18757743 PMID:19279005 GO_REF:0000107 NCBI chr 6:63,695,195...63,700,296
Ensembl chr 6:63,694,979...63,700,287 		JBrowse link
G WDR72 WD repeat domain 72 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:35181734) MGI
Ensembl		 PMID:35181734 GO_REF:0000107 NCBI chr 1:117,946,022...118,161,827
Ensembl chr 1:117,946,048...118,160,286 		JBrowse link
G WNT3A Wnt family member 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17943183) Ensembl
MGI		 PMID:17943183 GO_REF:0000107 NCBI chr 2:51,153,978...51,203,678
Ensembl chr 2:51,153,970...51,202,176 		JBrowse link
gene expression involved in extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (PMID:23900597) MGI PMID:23900597 NCBI chr 8:131,318,187...131,444,274
Ensembl chr 8:131,319,983...131,472,761 		JBrowse link
G PBXIP1 PBX homeobox interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:94,837,365...94,847,652
Ensembl chr 4:94,832,270...94,847,648 		JBrowse link
G ZNF469 zinc finger protein 469 acts_upstream_of_or_within ISO (PMID:34368841) MGI PMID:34368841 NCBI chr 6:1,161,514...1,208,406
Ensembl chr 6:1,162,822...1,174,257 		JBrowse link
glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL4A3 collagen type IV alpha 3 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:128,611,640...128,763,331
Ensembl chr15:128,611,866...128,763,122 		JBrowse link
G COL4A4 collagen type IV alpha 4 chain involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:10534397) Ensembl
MGI
GO_Central		 PMID:10534397 GO_REF:0000033 GO_REF:0000107 NCBI chr15:128,472,228...128,612,302
Ensembl chr15:128,476,257...128,595,477 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18480751) Ensembl
MGI		 PMID:18480751 GO_REF:0000107 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,610...20,935,540 		JBrowse link
G MPV17 mitochondrial inner membrane protein MPV17 involved_in ISO (MGI:3776221|PMID:16041630) UniProt PMID:16041630 MGI:3776221 NCBI chr 3:111,823,075...111,833,929
Ensembl chr 3:111,821,690...111,833,928 		JBrowse link
G MYO1E myosin IE involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,677,545...112,902,005
Ensembl chr 1:112,677,821...112,901,993 		JBrowse link
G NID1 nidogen 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14566019) Ensembl
MGI		 PMID:14566019 GO_REF:0000107 NCBI chr14:55,239,327...55,346,948
Ensembl chr14:55,239,577...55,390,782 		JBrowse link
G NPHS1 NPHS1 adhesion molecule, nephrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:45,248,325...45,271,892
Ensembl chr 6:45,248,325...45,274,577 		JBrowse link
G SULF1 sulfatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:65,595,947...65,778,889
Ensembl chr 4:65,595,951...65,778,884 		JBrowse link
G SULF2 sulfatase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:49,663,721...49,805,118
Ensembl chr17:49,663,731...49,804,577 		JBrowse link
G WT1 WT1 transcription factor involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:28,411,467...28,456,007
Ensembl chr 2:28,411,803...28,455,997 		JBrowse link
intercellular bridge organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRODH2 proline dehydrogenase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:45,213,712...45,240,437 JBrowse link
G TEX14 testis expressed 14, intercellular bridge forming factor involved_in IEA
IBA		 InterPro
GO_Central
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr12:34,815,472...34,975,901
Ensembl chr12:34,815,476...34,912,766 		JBrowse link
metanephric glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16886065), (PMID:7670489) Ensembl
MGI		 PMID:7670489 PMID:16886065 GO_REF:0000107 NCBI chr13:31,738,282...31,750,623
Ensembl chr13:31,738,286...31,750,833 		JBrowse link
negative regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHADL chondroadherin like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:7,246,892...7,258,962
Ensembl chr 5:7,248,444...7,253,170 		JBrowse link
G EMILIN1 elastin microfibril interfacer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:112,031,910...112,039,928
Ensembl chr 3:112,031,917...112,046,429 		JBrowse link
negative regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANTXR1 ANTXR cell adhesion molecule 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25572963) Ensembl
MGI		 PMID:25572963 GO_REF:0000107 NCBI chr 3:73,157,744...73,398,379
Ensembl chr 3:73,157,747...73,398,379 		JBrowse link
G MIR145 microRNA mir-145 involved_in
acts_upstream_of		 ISO (PMID:25704091)
(PMID:25323858)		 BHF-UCL PMID:25323858 PMID:25704091 NCBI chr 2:150,580,126...150,580,211
Ensembl chr 2:150,580,126...150,580,211 		JBrowse link
G MIR18A microRNA mir-18a involved_in ISO (PMID:28131417) BHF-UCL PMID:28131417 NCBI chr11:60,734,791...60,734,882
Ensembl chr11:60,734,791...60,734,882 		JBrowse link
G MIR19A microRNA mir-19a acts_upstream_of ISO (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr11:60,734,939...60,735,020
Ensembl chr11:60,734,939...60,735,020 		JBrowse link
G MIR19B-1 microRNA mir-19b-1 acts_upstream_of ISO (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr11:60,735,238...60,735,317
Ensembl chr11:60,735,230...60,735,328 		JBrowse link
G MIR19B-2 microRNA mir-19b-2 acts_upstream_of ISO (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr  X:110,113,855...110,113,934
Ensembl chr  X:110,113,855...110,113,934 		JBrowse link
G MIR27B microRNA mir-27b acts_upstream_of ISO (PMID:28095798) BHF-UCL PMID:28095798 NCBI chr10:27,079,963...27,080,042
Ensembl chr10:27,079,954...27,080,056 		JBrowse link
G MIR9-1 microRNA mir-9-1 acts_upstream_of ISO (PMID:26315535) BHF-UCL PMID:26315535 NCBI chr 4:93,660,422...93,660,510 JBrowse link
G MIR9-2 microRNA mir-9-2 acts_upstream_of ISO (PMID:26315535) BHF-UCL PMID:26315535 NCBI chr 2:96,076,352...96,076,438 JBrowse link
G MIR9-3 microRNA mir-9-3 acts_upstream_of ISO (PMID:26315535) BHF-UCL PMID:26315535 NCBI chr 7:54,948,452...54,948,532
Ensembl chr 7:54,948,447...54,948,536 		JBrowse link
G MIR98 microRNA mir-98 acts_upstream_of ISO (PMID:28251559) BHF-UCL PMID:28251559 NCBI chr  X:46,302,381...46,302,460
Ensembl chr  X:46,302,381...46,302,460 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISO (PMID:25704091) BHF-UCL PMID:25704091 NCBI chr13:68,301,566...68,433,951
Ensembl chr13:68,302,322...68,433,944 		JBrowse link
G TGFBR3 transforming growth factor beta receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:125,109,939...125,310,788
Ensembl chr 4:125,110,072...125,316,796 		JBrowse link
negative regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADTRP androgen dependent TFPI regulating protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:8,242,770...8,313,684
Ensembl chr 7:8,243,371...8,313,648 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107
G TNFRSF1A TNF receptor superfamily member 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:64,319,349...64,331,876
Ensembl chr 5:64,319,051...64,331,909 		JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:72,195,420...72,231,146
Ensembl chr 6:72,195,435...72,231,147 		JBrowse link
negative regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CST3 cystatin C involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:30,471,056...30,474,486
Ensembl chr17:30,470,855...30,474,590 		JBrowse link
G DPP4 dipeptidyl peptidase 4 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:68,661,764...68,742,961
Ensembl chr15:68,660,521...68,743,663 		JBrowse link
G FAP fibroblast activation protein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:68,831,281...68,902,416
Ensembl chr15:68,830,730...68,902,379 		JBrowse link
G MIR98 microRNA mir-98 involved_in ISO (PMID:26587789) ARUK-UCL PMID:26587789 NCBI chr  X:46,302,381...46,302,460
Ensembl chr  X:46,302,381...46,302,460 		JBrowse link
negative regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAP fibroblast activation protein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:68,831,281...68,902,416
Ensembl chr15:68,830,730...68,902,379 		JBrowse link
polarized secretion of basement membrane proteins in epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,707,026...73,826,529
Ensembl chr 5:73,707,050...73,826,430 		JBrowse link
positive regulation of basement membrane assembly involved in embryonic body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLASP1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr15:29,782,613...30,042,727
Ensembl chr15:29,782,746...30,042,734 		JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr13:19,305,430...19,510,589
Ensembl chr13:19,305,181...19,510,585 		JBrowse link
G DAG1 dystroglycan 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:32,028,019...32,092,450
Ensembl chr13:32,029,522...32,092,450 		JBrowse link
G PHLDB1 pleckstrin homology like domain family B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:45,902,099...45,949,415
Ensembl chr 9:45,902,155...45,949,415 		JBrowse link
G PHLDB2 pleckstrin homology like domain family B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:147,778,420...148,025,943
Ensembl chr13:147,778,370...147,879,794 		JBrowse link
G PHLDB2 pleckstrin homology like domain family B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:148,033,712...148,087,766
Ensembl chr13:148,033,704...148,087,744 		JBrowse link
positive regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COLGALT1 collagen beta(1-O)galactosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:60,138,303...60,166,751
Ensembl chr 2:60,138,306...60,162,632 		JBrowse link
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO (MGI:5660411|PMID:26178373), (MGI:5695689|PMID:26220971), (MGI:6158865|PMID:26711913)
(PMID:26178373), (PMID:26220971), (PMID:26711913)		 UniProt PMID:26178373 PMID:26220971 PMID:26711913 MGI:5660411 MGI:5695689 MGI:6158865 NCBI chr 2:6,455,155...6,463,493
Ensembl chr 2:6,450,332...6,463,486 		JBrowse link
G RB1 RB transcriptional corepressor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:19,186,754...19,317,642
Ensembl chr11:19,186,761...19,317,690 		JBrowse link
G TNXB tenascin XB involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:24,088,873...24,155,815
Ensembl chr 7:24,088,873...24,150,596 		JBrowse link
positive regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen involved_in
acts_upstream_of		 IEA
ISO		 (PMID:30729664) Ensembl
BHF-UCL		 PMID:30729664 GO_REF:0000107 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833 		JBrowse link
G EMILIN1 elastin microfibril interfacer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:112,031,910...112,039,928
Ensembl chr 3:112,031,917...112,046,429 		JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 ISO RGD PMID:27488450 RGD:152995505 NCBI chr 6:71,773,680...71,779,192
Ensembl chr 6:71,773,682...71,779,183 		JBrowse link
G MIR27B microRNA mir-27b acts_upstream_of ISO (PMID:30729664) BHF-UCL PMID:30729664 NCBI chr10:27,079,963...27,080,042
Ensembl chr10:27,079,954...27,080,056 		JBrowse link
G RGCC regulator of cell cycle involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:25,481,845...25,496,548
Ensembl chr11:25,478,879...25,496,519 		JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:30729664) Ensembl
BHF-UCL		 PMID:30729664 GO_REF:0000107 NCBI chr 1:164,998,457...165,124,455
Ensembl chr 1:164,998,103...165,124,449 		JBrowse link
G SMAD4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:100,521,843...100,633,501
Ensembl chr 1:100,589,850...100,628,029 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20881014) Ensembl
MGI		 PMID:20881014 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of ISO (MGI:5775885|PMID:24279830) BHF-UCL PMID:24279830 MGI:5775885 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 acts_upstream_of
involved_in		 ISO
IEA		 (PMID:28251559) BHF-UCL
Ensembl		 PMID:28251559 GO_REF:0000107 NCBI chr 1:240,842,735...240,918,267
Ensembl chr 1:240,860,156...240,918,528 		JBrowse link
positive regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:21419085 RGD:5129171 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833 		JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,195 		JBrowse link
G CPB2 carboxypeptidase B2 ISO RGD PMID:23369837 RGD:7243115 NCBI chr11:21,234,447...21,298,250
Ensembl chr11:21,234,447...21,298,241 		JBrowse link
G IER3IP1 immediate early response 3 interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:96,740,718...96,763,875
Ensembl chr 1:96,740,584...96,763,838 		JBrowse link
G RGCC regulator of cell cycle involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:25,481,845...25,496,548
Ensembl chr11:25,478,879...25,496,519 		JBrowse link
positive regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARMIL2 capping protein regulator and myosin 1 linker 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:28,265,130...28,277,649
Ensembl chr 6:28,265,135...28,277,641 		JBrowse link
G CLASP1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) UniProt PMID:24859005 NCBI chr15:29,782,613...30,042,727
Ensembl chr15:29,782,746...30,042,734 		JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) UniProt PMID:24859005 NCBI chr13:19,305,430...19,510,589
Ensembl chr13:19,305,181...19,510,585 		JBrowse link
G DDR2 discoidin domain receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:87,749,738...87,911,818
Ensembl chr 4:87,756,168...87,911,296 		JBrowse link
G FSCN1 fascin actin-bundling protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:4,134,173...4,143,275
Ensembl chr 3:4,134,177...4,143,286 		JBrowse link
G IL6 interleukin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:91,506,421...91,510,830
Ensembl chr 9:91,506,421...91,511,263 		JBrowse link
G MELTF melanotransferrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:133,094,869...133,122,092
Ensembl chr13:133,094,863...133,122,065 		JBrowse link
G PDPN podoplanin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:73,019,063...73,050,000
Ensembl chr 6:73,019,057...73,049,996 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in ISO (MGI:5688835|PMID:21984612)
(PMID:21984612)		 UniProt PMID:21984612 MGI:5688835 NCBI chr10:8,306,136...8,435,307
Ensembl chr10:8,305,539...8,390,341 		JBrowse link
positive regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO RGD PMID:19846571 RGD:8693597 NCBI chr 1:270,761,641...270,906,708
Ensembl chr 1:270,761,668...270,906,708 		JBrowse link
G CFLAR CASP8 and FADD like apoptosis regulator ISO RGD PMID:24691542 RGD:11341715 NCBI chr15:104,780,744...104,835,631
Ensembl chr15:104,781,616...104,835,630 		JBrowse link
G LOC110261221 cytochrome P450 2J2-like ISO RGD PMID:29656108 RGD:150520032 NCBI chr 6:152,321,816...152,358,179
Ensembl chr 6:152,321,848...152,648,979 		JBrowse link
G RB1 RB transcriptional corepressor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:19,186,754...19,317,642
Ensembl chr11:19,186,761...19,317,690 		JBrowse link
regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AEBP1 AE binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:51,046,895...51,056,789
Ensembl chr18:51,046,899...51,056,698 		JBrowse link
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO (MGI:5776647|PMID:26690653) UniProt PMID:26690653 MGI:5776647 NCBI chr 2:6,455,155...6,463,493
Ensembl chr 2:6,450,332...6,463,486 		JBrowse link
G LOC100623720 collagen alpha-1(VI) chain acts_upstream_of_or_within ISO (PMID:20951202) MGI PMID:20951202 NCBI chr13:208,295,245...208,321,789
Ensembl chr13:208,295,451...208,313,127 		JBrowse link
regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107
G SHAS2 hyaluronan synthase 2 ISO RGD PMID:27094859 RGD:12910548 NCBI chr 4:17,583,154...17,613,524
Ensembl chr 4:17,596,492...17,615,480 		JBrowse link
G TIE1 tyrosine kinase with immunoglobulin like and EGF like domains 1 acts_upstream_of
involved_in		 ISO
IEA		 (MGI:6370101|PMID:31319059)
(PMID:31319059)		 BHF-UCL
Ensembl		 PMID:31319059 GO_REF:0000107 MGI:6370101 NCBI chr 6:167,919,662...167,947,253
Ensembl chr 6:167,919,668...167,940,870 		JBrowse link
regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RIC1 RIC1 homolog, RAB6A GEF complex partner 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:216,382,179...216,494,815
Ensembl chr 1:216,382,128...216,494,793 		JBrowse link
regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDR1 discoidin domain receptor tyrosine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:23,371,358...23,391,585
Ensembl chr 7:23,373,845...23,391,584 		JBrowse link
G ETS1 ETS proto-oncogene 1, transcription factor ISO RGD PMID:16738537 RGD:2313717 NCBI chr 9:55,377,264...55,512,180
Ensembl chr 9:55,377,266...55,512,115 		JBrowse link
G FGFR4 fibroblast growth factor receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:80,841,536...80,853,791
Ensembl chr 2:80,841,536...80,853,796 		JBrowse link
regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20980600) Ensembl
MGI		 PMID:20980600 GO_REF:0000107 NCBI chr 1:270,761,641...270,906,708
Ensembl chr 1:270,761,668...270,906,708 		JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chr 9:120,888,891...120,984,724
Ensembl chr 9:120,892,952...120,984,695 		JBrowse link
G ANGPTL7 angiopoietin like 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,350,872...71,356,299
Ensembl chr 6:71,350,033...71,356,662 		JBrowse link
G AXIN2 axin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:12,311,293...12,343,207
Ensembl chr12:12,311,298...12,343,200 		JBrowse link
G ITGB3 integrin subunit beta 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22984613) Ensembl
MGI		 PMID:22984613 GO_REF:0000107 NCBI chr12:16,694,466...16,752,228
Ensembl chr12:16,693,514...16,752,292 		JBrowse link
G LEMD3 LEM domain containing 3 acts_upstream_of_or_within ISO (PMID:16943282) MGI PMID:16943282 NCBI chr 5:29,596,334...29,672,704
Ensembl chr 5:29,596,334...29,673,875 		JBrowse link
G MIR21 microRNA mir-21 acts_upstream_of ISO (PMID:18591254) BHF-UCL PMID:18591254 NCBI chr12:36,065,267...36,065,358
Ensembl chr12:36,065,267...36,065,358 		JBrowse link
G PRDM5 PR/SET domain 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:103,188,312...103,383,955
Ensembl chr 8:103,189,561...103,382,094 		JBrowse link
G RECK reversion inducing cysteine rich protein with kazal motifs involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:236,821,243...236,898,280
Ensembl chr 1:236,821,414...236,898,276 		JBrowse link
G SLC2A10 solute carrier family 2 member 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:26376865) ARUK-UCL
Ensembl		 PMID:26376865 GO_REF:0000107 NCBI chr17:48,824,054...48,842,811
Ensembl chr17:48,824,414...48,843,201 		JBrowse link
G TCF15 transcription factor 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24038871) Ensembl
MGI		 PMID:24038871 GO_REF:0000107 NCBI chr17:34,626,682...34,632,881
Ensembl chr17:34,626,670...34,633,263 		JBrowse link
G TGFB2 transforming growth factor beta 2 acts_upstream_of_or_within ISO (PMID:21780244) MGI PMID:21780244 NCBI chr10:8,306,136...8,435,307
Ensembl chr10:8,305,539...8,390,341 		JBrowse link
G ZNF469 zinc finger protein 469 involved_in ISO (PMID:21664999) ARUK-UCL PMID:21664999 NCBI chr 6:1,161,514...1,208,406
Ensembl chr 6:1,162,822...1,174,257 		JBrowse link
vitelline membrane formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17881493) Ensembl
MGI		 PMID:17881493 GO_REF:0000107 NCBI chr15:121,083,750...121,090,548
Ensembl chr15:121,083,753...121,090,121 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17651
    cellular process 17214
      cellular component organization or biogenesis 6599
        cellular component organization 6405
          extracellular structure organization 333
            extracellular matrix organization + 331
            intercellular bridge organization + 2
paths to the root