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ONTOLOGY REPORT - ANNOTATIONS

Term:extracellular structure organization
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Accession:GO:0043062 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures in the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane, and also covers the host cell environment outside an intracellular parasite.
Synonyms:exact_synonym: extracellular structure organisation;   extracellular structure organization and biogenesis


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extracellular structure organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TGFBR1 transforming growth factor beta receptor 1 involved_in TAS (PMID:9759503) UniProt PMID:9759503 NCBI chr 9:99,103,647...99,154,192
Ensembl chr 9:99,104,038...99,154,192 		JBrowse link
basement membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NTN4 netrin 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:95,657,807...95,791,155
Ensembl chr12:95,657,807...95,791,189 		JBrowse link
G PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16467571) Ensembl
MGI		 PMID:16467571 GO_REF:0000107 NCBI chr 7:101,205,984...101,217,581
Ensembl chr 7:101,205,977...101,218,420 		JBrowse link
G PXDN peroxidasin involved_in
acts_upstream_of		 ISS
IEA
IMP		 (PMID:22842973)
(PMID:32543734)
(PMID:25708780), (PMID:27697841), (PMID:32571911)		 FlyBase
Ensembl
UniProt		 PMID:22842973 PMID:25708780 PMID:27697841 PMID:32543734 PMID:32571911 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:1,631,887...1,744,901
Ensembl chr 2:1,631,887...1,744,852 		JBrowse link
G RAMP2 receptor activity modifying protein 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:42,761,227...42,763,041
Ensembl chr17:42,758,447...42,763,041 		JBrowse link
basement membrane disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMA1 chymase 1 involved_in IDA (PMID:27068509) BHF-UCL PMID:27068509 NCBI chr14:24,505,353...24,508,265
Ensembl chr14:24,505,353...24,508,265 		JBrowse link
G CTSS cathepsin S involved_in IDA (PMID:22952693) BHF-UCL PMID:22952693 NCBI chr 1:150,730,188...150,765,778
Ensembl chr 1:150,730,079...150,765,957 		JBrowse link
G HPN hepsin involved_in IDA (PMID:16908524) UniProt PMID:16908524 NCBI chr19:35,040,506...35,066,573
Ensembl chr19:35,040,506...35,066,573 		JBrowse link
basement membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV1 caveolin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11884617) Ensembl
MGI		 PMID:11884617 GO_REF:0000107 NCBI chr 7:116,525,009...116,561,185
Ensembl chr 7:116,524,994...116,561,179 		JBrowse link
G CAV2 caveolin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11884617) Ensembl
MGI		 PMID:11884617 GO_REF:0000107 NCBI chr 7:116,499,738...116,508,541
Ensembl chr 7:116,287,380...116,508,541 		JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:188,974,373...189,012,746
Ensembl chr 2:188,974,373...189,012,746 		JBrowse link
G COL4A1 collagen type IV alpha 1 chain involved_in IMP (PMID:18160688), (PMID:19949034), (PMID:23065703) BHF-UCL PMID:18160688 PMID:19949034 PMID:23065703 NCBI chr13:110,148,963...110,307,157
Ensembl chr13:110,148,963...110,307,202 		JBrowse link
G COL6A1 collagen type VI alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25158062) Ensembl
MGI		 PMID:25158062 GO_REF:0000107 NCBI chr21:45,981,770...46,005,048
Ensembl chr21:45,981,770...46,005,050 		JBrowse link
G DAG1 dystroglycan 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23217742) Ensembl
MGI		 PMID:23217742 GO_REF:0000107 NCBI chr 3:49,468,948...49,535,615
Ensembl chr 3:49,468,713...49,535,618 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26024086) Ensembl
MGI		 PMID:26024086 GO_REF:0000107 NCBI chr 8:117,794,490...118,111,826
Ensembl chr 8:117,794,490...118,111,826 		JBrowse link
G FERMT1 FERM domain containing kindlin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:6,074,845...6,123,030
Ensembl chr20:6,074,845...6,123,214 		JBrowse link
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28039900) Ensembl
MGI		 PMID:28039900 GO_REF:0000107 NCBI chr19:46,744,760...46,758,575
Ensembl chr19:46,746,046...46,776,988 		JBrowse link
G FKTN fukutin acts_upstream_of_or_within ISO (PMID:29360985) MGI PMID:29360985 NCBI chr 9:105,558,130...105,641,118
Ensembl chr 9:105,558,122...105,653,820 		JBrowse link
G FLRT2 fibronectin leucine rich transmembrane protein 2 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:85,530,144...85,654,428
Ensembl chr14:85,530,144...85,654,428 		JBrowse link
G FSHR follicle stimulating hormone receptor acts_upstream_of_or_within ISO (PMID:9811848) MGI PMID:9811848 NCBI chr 2:48,962,157...49,154,515
Ensembl chr 2:48,962,157...49,154,527 		JBrowse link
G GAS2 growth arrest specific 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27734842) Ensembl
MGI		 PMID:27734842 GO_REF:0000107 NCBI chr11:22,626,002...22,813,055
Ensembl chr11:22,625,509...22,813,001 		JBrowse link
G HMCN1 hemicentin 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:185,734,391...186,190,949
Ensembl chr 1:185,734,391...186,190,949 		JBrowse link
G ITGB1 integrin subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:32,900,318...32,958,230
Ensembl chr10:32,887,273...33,005,792 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12140558), (PMID:21970971) Ensembl
MGI		 PMID:12140558 PMID:21970971 GO_REF:0000107 NCBI chr22:33,066,663...33,922,824
Ensembl chr22:33,162,226...33,922,841 		JBrowse link
G MMP11 matrix metallopeptidase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18622425) Ensembl
MGI		 PMID:18622425 GO_REF:0000107 NCBI chr22:23,772,849...23,784,316
Ensembl chr22:23,768,226...23,784,316 		JBrowse link
G NID1 nidogen 1 involved_in TAS (PMID:22952693) BHF-UCL PMID:22952693 NCBI chr 1:235,975,830...236,065,090
Ensembl chr 1:235,975,830...236,065,109 		JBrowse link
G NID2 nidogen 2 involved_in TAS (PMID:22952693) BHF-UCL PMID:22952693 NCBI chr14:52,004,809...52,069,059
Ensembl chr14:52,004,809...52,069,059 		JBrowse link
G PMP22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (PMID:16436605) MGI PMID:16436605 NCBI chr17:15,229,779...15,265,326
Ensembl chr17:15,229,773...15,272,292 		JBrowse link
G POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21970971) Ensembl
MGI		 PMID:21970971 GO_REF:0000107 NCBI chr 1:46,188,683...46,220,305
Ensembl chr 1:46,188,683...46,220,305 		JBrowse link
G POMT2 protein O-mannosyltransferase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21970971) Ensembl
MGI		 PMID:21970971 GO_REF:0000107 NCBI chr14:77,274,956...77,320,883
Ensembl chr14:77,274,956...77,320,883 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:42,456,757...42,589,746
Ensembl chr12:42,456,757...42,590,355 		JBrowse link
G PXDN peroxidasin involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:1,631,887...1,744,901
Ensembl chr 2:1,631,887...1,744,852 		JBrowse link
G RIC8A RIC8 guanine nucleotide exchange factor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21069829) Ensembl
MGI		 PMID:21069829 GO_REF:0000107 NCBI chr11:207,708...215,113
Ensembl chr11:207,708...215,113 		JBrowse link
G SPINT2 serine peptidase inhibitor, Kunitz type 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19592578) Ensembl
MGI		 PMID:19592578 GO_REF:0000107 NCBI chr19:38,264,573...38,292,615
Ensembl chr19:38,244,035...38,292,615 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:16186342) MGI PMID:16186342 NCBI chr 6:10,396,677...10,419,659
Ensembl chr 6:10,393,186...10,419,659 		JBrowse link
biofilm matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSG cathepsin G involved_in IDA (PMID:32995850) UniProt PMID:32995850 NCBI chr14:24,573,518...24,576,250
Ensembl chr14:24,573,518...24,576,250 		JBrowse link
collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:3070812) Ensembl
MGI		 PMID:3070812 GO_REF:0000107 NCBI chr15:88,803,436...88,875,353
Ensembl chr15:88,803,436...88,875,353 		JBrowse link
G ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:33,523,535...33,891,990
Ensembl chr 5:33,523,535...33,892,019 		JBrowse link
G ADAMTS14 ADAM metallopeptidase with thrombospondin type 1 motif 14 involved_in
acts_upstream_of_or_within		 IEA
ISO
TAS		 (PMID:11741898) Ensembl
MGI
Reactome		 PMID:11741898 GO_REF:0000107 Reactome:R-HSA-1650814 NCBI chr10:70,672,506...70,762,441
Ensembl chr10:70,672,506...70,762,441 		JBrowse link
G ADAMTS19 ADAM metallopeptidase with thrombospondin type 1 motif 19 involved_in ISS
IEA		 (PMID:31844321) BHF-UCL
Ensembl		 PMID:31844321 GO_REF:0000107 NCBI chr 5:129,460,298...129,738,683
Ensembl chr 5:129,460,281...129,738,683 		JBrowse link
G ADAMTS2 ADAM metallopeptidase with thrombospondin type 1 motif 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
TAS		 (PMID:16556917) Ensembl
MGI
Reactome		 PMID:16556917 GO_REF:0000107 Reactome:R-HSA-1650814 NCBI chr 5:179,110,853...179,345,461
Ensembl chr 5:179,110,853...179,345,461 		JBrowse link
G ADAMTS3 ADAM metallopeptidase with thrombospondin type 1 motif 3 involved_in TAS
NAS
IC		 (PMID:11812023)
(PMID:11408482)		 Reactome
UniProt
BHF-UCL		 PMID:11408482 PMID:11812023 Reactome:R-HSA-1650814 NCBI chr 4:72,280,969...72,569,221
Ensembl chr 4:72,280,969...72,569,221 		JBrowse link
G ADAMTS7 ADAM metallopeptidase with thrombospondin type 1 motif 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:78,759,206...78,811,464
Ensembl chr15:78,759,206...78,811,464 		JBrowse link
G ANTXR2 ANTXR cell adhesion molecule 2 acts_upstream_of_or_within ISO (PMID:28604699) MGI PMID:28604699 NCBI chr 4:79,901,146...80,073,472
Ensembl chr 4:79,901,146...80,125,454 		JBrowse link
G ANXA2 annexin A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14702107) Ensembl
MGI		 PMID:14702107 GO_REF:0000107 NCBI chr15:60,347,151...60,397,986
Ensembl chr15:60,347,134...60,402,883 		JBrowse link
G ATP7A ATPase copper transporting alpha involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:8096378)
(PMID:4808708)
(PMID:20889), (PMID:8895222)
(PMID:16338116)		 UniProt
MGI		 PMID:20889 PMID:4808708 PMID:8096378 PMID:8895222 PMID:16338116 GO_REF:0000024 NCBI chr  X:77,910,693...78,050,395
Ensembl chr  X:77,910,690...78,050,395 		JBrowse link
G BMP1 bone morphogenetic protein 1 involved_in TAS Reactome Reactome:R-HSA-1650814 Reactome:R-HSA-2214320 Reactome:R-HSA-2243919 NCBI chr 8:22,165,372...22,212,326
Ensembl chr 8:22,165,140...22,212,326 		JBrowse link
G COL11A1 collagen type XI alpha 1 chain involved_in
acts_upstream_of_or_within		 NAS
ISO
IEA		 (PMID:3182841)
(PMID:17029294), (PMID:21467034)
(PMID:17029294), (PMID:17683922), (PMID:21467034), (PMID:3070812), (PMID:4100752), (PMID:4110409), (PMID:7859283)		 UniProt
MGI
Ensembl		 PMID:3070812 PMID:3182841 PMID:4100752 PMID:4110409 PMID:7859283 More... GO_REF:0000107 NCBI chr 1:102,876,473...103,108,522
Ensembl chr 1:102,876,467...103,108,872 		JBrowse link
G COL11A2 collagen type XI alpha 2 chain involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
IDA		 (PMID:10581026), (PMID:11668593)
(PMID:9188673)		 Ensembl
MGI
GO_Central
UniProt		 PMID:9188673 PMID:10581026 PMID:11668593 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:33,162,694...33,193,519
Ensembl chr 6:33,162,681...33,192,499 		JBrowse link
G COL12A1 collagen type XII alpha 1 chain involved_in NAS (PMID:1427837) UniProt PMID:1427837 NCBI chr 6:75,084,326...75,206,053
Ensembl chr 6:75,084,326...75,206,267 		JBrowse link
G COL14A1 collagen type XIV alpha 1 chain involved_in
acts_upstream_of_or_within		 NAS
ISO
IEA		 (PMID:2187872)
(PMID:22906538)		 UniProt
MGI
Ensembl		 PMID:2187872 PMID:22906538 GO_REF:0000107 NCBI chr 8:120,124,454...120,373,573
Ensembl chr 8:120,059,780...120,373,573 		JBrowse link
G COL18A1 collagen type XVIII alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr21:45,405,165...45,513,720
Ensembl chr21:45,405,165...45,513,720 		JBrowse link
G COL1A1 collagen type I alpha 1 chain involved_in IMP
NAS		 (PMID:14976317), (PMID:15095409), (PMID:17211858), (PMID:18375391)
(PMID:1916105), (PMID:28281531)		 UniProt
ComplexPortal		 PMID:1916105 PMID:14976317 PMID:15095409 PMID:17211858 PMID:18375391 More... NCBI chr17:50,184,101...50,201,631
Ensembl chr17:50,184,101...50,201,632 		JBrowse link
G COL1A2 collagen type I alpha 2 chain involved_in IMP
NAS		 (PMID:17211858), (PMID:18375391)
(PMID:1916105)		 UniProt
ComplexPortal		 PMID:1916105 PMID:17211858 PMID:18375391 NCBI chr 7:94,394,895...94,431,227
Ensembl chr 7:94,394,895...94,431,227 		JBrowse link
G COL27A1 collagen type XXVII alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:114,154,098...114,312,511
Ensembl chr 9:114,155,537...114,312,511 		JBrowse link
G COL28A1 collagen type XXVIII alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:7,338,194...7,543,870
Ensembl chr 7:7,356,203...7,535,873 		JBrowse link
G COL2A1 collagen type II alpha 1 chain involved_in
acts_upstream_of_or_within		 IMP
ISO
IBA
IEA		 (PMID:1429602)
(PMID:9022054)
(PMID:11171689), (PMID:7590256), (PMID:9832566), (PMID:9915573)
(PMID:3070812), (PMID:7276808), (PMID:8989518)		 BHF-UCL
MGI
GO_Central
Ensembl		 PMID:1429602 PMID:3070812 PMID:7276808 PMID:7590256 PMID:8989518 More... GO_REF:0000033 GO_REF:0000107 NCBI chr12:47,972,967...48,006,212
Ensembl chr12:47,972,967...48,004,554 		JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO
NAS
IMP		 (PMID:9050868)
(PMID:1672129), (PMID:18805790)
(PMID:7546986), (PMID:9036918)		 Ensembl
MGI
UniProt		 PMID:1672129 PMID:7546986 PMID:9036918 PMID:9050868 PMID:18805790 GO_REF:0000107 NCBI chr 2:188,974,373...189,012,746
Ensembl chr 2:188,974,373...189,012,746 		JBrowse link
G COL5A1 collagen type V alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
NAS
IMP		 (PMID:17029294), (PMID:21467034)
(PMID:15383546), (PMID:16492673), (PMID:17029294)
(PMID:16430677), (PMID:37158802)
(PMID:11278977), (PMID:15095409), (PMID:9683580)		 Ensembl
MGI
GO_Central
UniProt		 PMID:9683580 PMID:11278977 PMID:15095409 PMID:15383546 PMID:16430677 More... GO_REF:0000033 GO_REF:0000107 NCBI chr 9:134,641,803...134,844,843
Ensembl chr 9:134,641,803...134,844,843 		JBrowse link
G COL5A2 collagen type V alpha 2 chain involved_in ISS
NAS
IEA
IMP		 (PMID:37158802)
(PMID:9425231)		 UniProt
ComplexPortal
Ensembl		 PMID:9425231 PMID:37158802 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:189,031,898...189,441,111
Ensembl chr 2:189,031,898...189,225,312 		JBrowse link
G COL5A3 collagen type V alpha 3 chain involved_in NAS (PMID:10722718), (PMID:37158802) ComplexPortal PMID:10722718 PMID:37158802 NCBI chr19:9,959,561...10,010,504
Ensembl chr19:9,959,561...10,010,504 		JBrowse link
G COL6A1 collagen type VI alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25158062)
(PMID:28604699)		 Ensembl
MGI		 PMID:25158062 PMID:28604699 GO_REF:0000107 NCBI chr21:45,981,770...46,005,048
Ensembl chr21:45,981,770...46,005,050 		JBrowse link
G COLGALT1 collagen beta(1-O)galactosyltransferase 1 involved_in TAS Reactome Reactome:R-HSA-1650814 NCBI chr19:17,555,649...17,583,157
Ensembl chr19:17,555,649...17,583,162 		JBrowse link
G COLGALT2 collagen beta(1-O)galactosyltransferase 2 involved_in TAS Reactome Reactome:R-HSA-1650814 NCBI chr 1:183,929,662...184,037,728
Ensembl chr 1:183,929,854...184,037,729 		JBrowse link
G COMP cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26746240)
(PMID:19808781)
(PMID:24312420)		 Ensembl
MGI		 PMID:19808781 PMID:24312420 PMID:26746240 GO_REF:0000107 NCBI chr19:18,782,773...18,791,305
Ensembl chr19:18,782,773...18,791,305 		JBrowse link
G CRTAP cartilage associated protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:33,114,014...33,147,773
Ensembl chr 3:33,114,014...33,147,773 		JBrowse link
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:38,067,509...38,076,151
Ensembl chr 2:38,066,973...38,109,902 		JBrowse link
G DDR2 discoidin domain receptor tyrosine kinase 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:162,630,863...162,787,405
Ensembl chr 1:162,631,373...162,787,405 		JBrowse link
G DPT dermatopontin involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:12230512), (PMID:16877395) Ensembl
MGI
GO_Central		 PMID:12230512 PMID:16877395 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:168,695,468...168,729,206
Ensembl chr 1:168,695,468...168,729,206 		JBrowse link
G ERO1A endoplasmic reticulum oxidoreductase 1 alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:28106121) MGI
Ensembl		 PMID:28106121 GO_REF:0000107 NCBI chr14:52,639,915...52,695,558
Ensembl chr14:52,639,915...52,695,900 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19850926) Ensembl
MGI		 PMID:19850926 GO_REF:0000107 NCBI chr 8:117,794,490...118,111,826
Ensembl chr 8:117,794,490...118,111,826 		JBrowse link
G FKBP10 FKBP prolyl isomerase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24777781)
(PMID:28206698)		 Ensembl
MGI		 PMID:24777781 PMID:28206698 GO_REF:0000107 NCBI chr17:41,813,004...41,823,213
Ensembl chr17:41,812,680...41,823,213 		JBrowse link
G FMOD fibromodulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:203,340,628...203,351,122
Ensembl chr 1:203,340,628...203,351,758 		JBrowse link
G FOXC1 forkhead box C1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10767326) Ensembl
MGI		 PMID:10767326 GO_REF:0000107 NCBI chr 6:1,609,915...1,613,897
Ensembl chr 6:1,609,915...1,613,897 		JBrowse link
G FOXC2 forkhead box C2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10767326) Ensembl
MGI		 PMID:10767326 GO_REF:0000107 NCBI chr16:86,566,829...86,569,728
Ensembl chr16:86,566,829...86,569,728 		JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in IMP (PMID:15539560) BHF-UCL PMID:15539560 NCBI chr15:32,718,004...32,745,106
Ensembl chr15:32,718,004...32,745,106 		JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:10660670) MGI PMID:10660670 NCBI chr 9:126,613,928...126,701,032
Ensembl chr 9:126,613,928...126,701,032 		JBrowse link
G LOX lysyl oxidase acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:26700732) RGD
MGI
GO_Central
Ensembl		 PMID:16432278 PMID:16804742 PMID:26700732 GO_REF:0000033 GO_REF:0000107 RGD:1600668 RGD:1600669 NCBI chr 5:122,063,195...122,078,259
Ensembl chr 5:122,063,195...122,078,413 		JBrowse link
G LOXL1 lysyl oxidase like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:73,926,462...73,952,136
Ensembl chr15:73,925,989...73,952,137 		JBrowse link
G LOXL2 lysyl oxidase like 2 involved_in IMP
IBA		 (PMID:21835952) UniProt
GO_Central		 PMID:21835952 GO_REF:0000033 NCBI chr 8:23,296,897...23,404,120
Ensembl chr 8:23,296,897...23,425,328 		JBrowse link
G LOXL3 lysyl oxidase like 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:74,532,258...74,555,702
Ensembl chr 2:74,532,258...74,555,690 		JBrowse link
G LOXL4 lysyl oxidase like 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:98,247,690...98,268,194
Ensembl chr10:98,247,690...98,268,194 		JBrowse link
G LUM lumican involved_in NAS (PMID:10892350) UniProt PMID:10892350 NCBI chr12:91,102,629...91,111,494
Ensembl chr12:91,102,629...91,111,494 		JBrowse link
G MIA3 MIA SH3 domain ER export factor 3 acts_upstream_of_or_within ISO (PMID:21606205) MGI PMID:21606205 NCBI chr 1:222,618,097...222,668,007
Ensembl chr 1:222,618,097...222,668,007 		JBrowse link
G MKX mohawk homeobox acts_upstream_of_or_within ISO (PMID:20696843) MGI PMID:20696843 NCBI chr10:27,672,874...27,745,819
Ensembl chr10:27,672,874...27,746,060 		JBrowse link
G MMP11 matrix metallopeptidase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18622425) Ensembl
MGI		 PMID:18622425 GO_REF:0000107 NCBI chr22:23,772,849...23,784,316
Ensembl chr22:23,768,226...23,784,316 		JBrowse link
G NF1 neurofibromin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:10383727) Ensembl
MGI
HGNC-UCL		 PMID:10383727 GO_REF:0000024 GO_REF:0000107 NCBI chr17:31,094,927...31,377,677
Ensembl chr17:31,094,927...31,382,116 		JBrowse link
G OPTC opticin involved_in ISS
IEA
IBA		 UniProt
Ensembl
GO_Central		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:203,494,153...203,508,949
Ensembl chr 1:203,494,121...203,508,949 		JBrowse link
G P3H1 prolyl 3-hydroxylase 1 acts_upstream_of_or_within ISO (PMID:20363744) MGI PMID:20363744 NCBI chr 1:42,746,374...42,767,028
Ensembl chr 1:42,746,335...42,767,084 		JBrowse link
G P3H4 prolyl 3-hydroxylase family member 4 (inactive) involved_in IEA
IBA
ISS		 Ensembl
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:41,801,953...41,811,949
Ensembl chr17:41,801,947...41,812,604 		JBrowse link
G P4HA1 prolyl 4-hydroxylase subunit alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17135260) Ensembl
MGI		 PMID:17135260 GO_REF:0000107 NCBI chr10:73,007,217...73,096,866
Ensembl chr10:73,007,217...73,096,974 		JBrowse link
G PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO
TAS		 (PMID:16467571) Ensembl
MGI
Reactome		 PMID:16467571 GO_REF:0000107 Reactome:R-HSA-1650814 NCBI chr 7:101,205,984...101,217,581
Ensembl chr 7:101,205,977...101,218,420 		JBrowse link
G PXDN peroxidasin involved_in IMP (PMID:22842973) FlyBase PMID:22842973 NCBI chr 2:1,631,887...1,744,901
Ensembl chr 2:1,631,887...1,744,852 		JBrowse link
G SCX scleraxis bHLH transcription factor involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:144,266,453...144,268,481
Ensembl chr 8:144,266,453...144,268,481 		JBrowse link
G SELENON selenoprotein N acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:28106121) MGI
Ensembl		 PMID:28106121 GO_REF:0000107 NCBI chr 1:25,800,193...25,818,221
Ensembl chr 1:25,800,193...25,818,221 		JBrowse link
G SERPINF2 serpin family F member 2 involved_in IEA
ISS		 (PMID:17958745) Ensembl
BHF-UCL		 PMID:17958745 GO_REF:0000107 NCBI chr17:1,742,871...1,755,265
Ensembl chr17:1,742,836...1,755,265 		JBrowse link
G SERPINH1 serpin family H member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:10995453)
(PMID:22492985)		 Ensembl
MGI
GO_Central		 PMID:10995453 PMID:22492985 GO_REF:0000033 GO_REF:0000107 NCBI chr11:75,562,253...75,572,783
Ensembl chr11:75,562,056...75,572,783 		JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19079247) Ensembl
MGI		 PMID:19079247 GO_REF:0000107 NCBI chr 4:153,780,591...153,789,083
Ensembl chr 4:153,780,591...153,789,083 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in IDA (PMID:16891397) BHF-UCL PMID:16891397 NCBI chr 1:218,345,336...218,444,619
Ensembl chr 1:218,345,336...218,444,619 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:15993878) BHF-UCL
MGI
Ensembl		 PMID:15993878 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:99,103,647...99,154,192
Ensembl chr 9:99,104,038...99,154,192 		JBrowse link
G TLL1 tolloid like 1 involved_in TAS Reactome Reactome:R-HSA-1650814 Reactome:R-HSA-2214320 Reactome:R-HSA-2243919 NCBI chr 4:165,873,237...166,104,457
Ensembl chr 4:165,873,237...166,104,457 		JBrowse link
G TLL2 tolloid like 2 involved_in TAS Reactome Reactome:R-HSA-2214320 NCBI chr10:96,364,608...96,513,926
Ensembl chr10:96,364,608...96,513,926 		JBrowse link
G TNXB tenascin XB involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15194424)
(PMID:11925569)		 Ensembl
MGI		 PMID:11925569 PMID:15194424 GO_REF:0000107 NCBI chr 6:32,041,153...32,109,338
Ensembl chr 6:32,041,153...32,115,334 		JBrowse link
G VIPAS39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27435297) Ensembl
MGI		 PMID:27435297 GO_REF:0000107 NCBI chr14:77,426,675...77,457,601
Ensembl chr14:77,426,675...77,457,952 		JBrowse link
G VPS33B VPS33B late endosome and lysosome associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27435297) Ensembl
MGI		 PMID:27435297 GO_REF:0000107 NCBI chr15:90,998,416...91,022,621
Ensembl chr15:90,998,673...91,022,603 		JBrowse link
G ZNF469 zinc finger protein 469 acts_upstream_of_or_within ISO (PMID:34368841) MGI PMID:34368841 NCBI chr16:88,100,931...88,440,753
Ensembl chr16:88,382,959...88,440,757 		JBrowse link
elastic fiber assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP7A ATPase copper transporting alpha involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:16338116)
(PMID:20889), (PMID:3385878), (PMID:937819)		 UniProt
MGI		 PMID:20889 PMID:937819 PMID:3385878 PMID:16338116 GO_REF:0000024 NCBI chr  X:77,910,693...78,050,395
Ensembl chr  X:77,910,690...78,050,395 		JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:188,974,373...189,012,746
Ensembl chr 2:188,974,373...189,012,746 		JBrowse link
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 involved_in
acts_upstream_of_or_within		 IMP
ISO
ISS		 (PMID:18973305), (PMID:27339457)
(PMID:19855011)		 UniProt
MGI		 PMID:18973305 PMID:19855011 PMID:27339457 GO_REF:0000024 NCBI chr11:65,866,441...65,872,800
Ensembl chr11:65,866,441...65,873,592 		JBrowse link
G EMILIN1 elastin microfibril interfacer 1 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:27,078,615...27,086,403
Ensembl chr 2:27,078,615...27,086,403 		JBrowse link
G FBLN5 fibulin 5 involved_in IMP
IBA
ISS		 (PMID:17035250) UniProt
GO_Central
BHF-UCL		 PMID:17035250 GO_REF:0000024 GO_REF:0000033 NCBI chr14:91,869,411...91,947,694
Ensembl chr14:91,869,411...91,947,987 		JBrowse link
G LOX lysyl oxidase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12417550), (PMID:16192629)
(PMID:23413430)		 RGD
MGI
Ensembl		 PMID:12417550 PMID:16192629 PMID:16432278 PMID:23413430 GO_REF:0000107 RGD:1600669 NCBI chr 5:122,063,195...122,078,259
Ensembl chr 5:122,063,195...122,078,413 		JBrowse link
G LTBP4 latent transforming growth factor beta binding protein 4 involved_in ISS UniProt GO_REF:0000024 NCBI chr19:40,593,166...40,629,820
Ensembl chr19:40,592,883...40,629,818 		JBrowse link
G MFAP4 microfibril associated protein 4 involved_in IDA
IBA		 (PMID:22355679) BHF-UCL
GO_Central		 PMID:22355679 GO_REF:0000033 NCBI chr17:19,383,445...19,387,190
Ensembl chr17:19,383,442...19,387,190 		JBrowse link
G MYH11 myosin heavy chain 11 involved_in IMP (PMID:16444274) UniProt PMID:16444274 NCBI chr16:15,703,135...15,857,028
Ensembl chr16:15,703,135...15,858,438 		JBrowse link
G THSD4 thrombospondin type 1 domain containing 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19940141) Ensembl
MGI		 PMID:19940141 GO_REF:0000107 NCBI chr15:71,096,894...71,783,383
Ensembl chr15:71,096,952...71,783,383 		JBrowse link
G TNXB tenascin XB involved_in IMP (PMID:15102077) UniProt PMID:15102077 NCBI chr 6:32,041,153...32,109,338
Ensembl chr 6:32,041,153...32,115,334 		JBrowse link
extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL1A2 collagen type I alpha 2 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22910579) Ensembl
MGI		 PMID:22910579 GO_REF:0000107 NCBI chr 7:94,394,895...94,431,227
Ensembl chr 7:94,394,895...94,431,227 		JBrowse link
G COL6A1 collagen type VI alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19114551) Ensembl
MGI		 PMID:19114551 GO_REF:0000107 NCBI chr21:45,981,770...46,005,048
Ensembl chr21:45,981,770...46,005,050 		JBrowse link
G ELN elastin involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:74,028,173...74,069,907
Ensembl chr 7:74,027,789...74,069,907 		JBrowse link
G FKBP10 FKBP prolyl isomerase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28774593) Ensembl
MGI		 PMID:28774593 GO_REF:0000107 NCBI chr17:41,813,004...41,823,213
Ensembl chr17:41,812,680...41,823,213 		JBrowse link
G GAS6 growth arrest specific 6 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:113,820,549...113,864,076
Ensembl chr13:113,820,549...113,864,076 		JBrowse link
G GPM6B glycoprotein M6B involved_in IMP (PMID:21638316) UniProt PMID:21638316 NCBI chr  X:13,770,939...13,938,638
Ensembl chr  X:13,770,939...13,938,638 		JBrowse link
G HAPLN2 hyaluronan and proteoglycan link protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20181608) Ensembl
MGI		 PMID:20181608 GO_REF:0000107 NCBI chr 1:156,601,504...156,625,725
Ensembl chr 1:156,619,331...156,625,725 		JBrowse link
G HAS1 hyaluronan synthase 1 involved_in IEA
IBA
ISS		 Ensembl
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr19:51,713,112...51,723,991
Ensembl chr19:51,713,112...51,723,991 		JBrowse link
G HAS2 hyaluronan synthase 2 involved_in IEA
IBA
ISS		 Ensembl
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:121,612,116...121,641,440
Ensembl chr 8:121,612,116...121,641,440 		JBrowse link
G HAS3 hyaluronan synthase 3 involved_in ISS
IBA
IEA		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr16:69,083,484...69,118,719
Ensembl chr16:69,105,653...69,118,719 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:42,456,757...42,589,746
Ensembl chr12:42,456,757...42,590,355 		JBrowse link
G QSOX1 quiescin sulfhydryl oxidase 1 involved_in IMP (PMID:23867277) UniProt PMID:23867277 NCBI chr 1:180,154,869...180,204,030
Ensembl chr 1:180,154,869...180,204,030 		JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22910579) Ensembl
MGI		 PMID:22910579 GO_REF:0000107 NCBI chr16:68,358,327...68,448,508
Ensembl chr16:68,358,327...68,448,508 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:20881014) Ensembl
MGI		 PMID:20881014 GO_REF:0000107 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA
IDA		 (PMID:19734317) Ensembl
BHF-UCL		 PMID:19734317 GO_REF:0000107 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922 		JBrowse link
extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCN2 cellular communication network factor 2 ISO positive regulation RGD PMID:18613219 RGD:2314619 NCBI chr 6:131,948,176...131,951,372
Ensembl chr 6:131,948,176...131,951,372 		JBrowse link
G CREB3L1 cAMP responsive element binding protein 3 like 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr11:46,277,662...46,321,409
Ensembl chr11:46,277,662...46,321,409 		JBrowse link
G ENG endoglin involved_in ISO
IEA		 RGD
Ensembl		 PMID:15539634 GO_REF:0000107 RGD:1601032 NCBI chr 9:127,815,016...127,854,658
Ensembl chr 9:127,811,130...127,854,773 		JBrowse link
G TMEM38B transmembrane protein 38B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27188440) Ensembl
MGI		 PMID:27188440 GO_REF:0000107 NCBI chr 9:105,694,541...105,776,629
Ensembl chr 9:105,694,541...105,776,629 		JBrowse link
G ZNF469 zinc finger protein 469 acts_upstream_of_or_within ISO (PMID:34368841) MGI PMID:34368841 NCBI chr16:88,100,931...88,440,753
Ensembl chr16:88,382,959...88,440,757 		JBrowse link
extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAM10 ADAM metallopeptidase domain 10 involved_in TAS Reactome Reactome:R-HSA-1474228 NCBI chr15:58,588,809...58,749,707
Ensembl chr15:58,588,809...58,749,791 		JBrowse link
G ADAM15 ADAM metallopeptidase domain 15 involved_in TAS Reactome Reactome:R-HSA-1474228 NCBI chr 1:155,051,316...155,062,775
Ensembl chr 1:155,050,566...155,062,775 		JBrowse link
G ADAM8 ADAM metallopeptidase domain 8 involved_in TAS Reactome Reactome:R-HSA-1474228 NCBI chr10:133,262,423...133,276,868
Ensembl chr10:133,262,420...133,276,868 		JBrowse link
G ADAMTS15 ADAM metallopeptidase with thrombospondin type 1 motif 15 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr11:130,448,645...130,476,645
Ensembl chr11:130,448,645...130,476,645 		JBrowse link
G ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 involved_in TAS Reactome Reactome:R-HSA-1474228 NCBI chr 1:161,184,302...161,199,054
Ensembl chr 1:161,184,302...161,199,054 		JBrowse link
G ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif 5 involved_in IEA
ISS
TAS		 Ensembl
UniProt
Reactome		 GO_REF:0000024 GO_REF:0000107 Reactome:R-HSA-1474228 NCBI chr21:26,917,922...26,967,088
Ensembl chr21:26,917,922...26,967,088 		JBrowse link
G CAPG capping actin protein, gelsolin like NOT|involved_in IMP (PMID:24236012) UniProt PMID:24236012 NCBI chr 2:85,391,602...85,419,540
Ensembl chr 2:85,394,753...85,418,432 		JBrowse link
G CMA1 chymase 1 involved_in IDA (PMID:27068509) BHF-UCL PMID:27068509 NCBI chr14:24,505,353...24,508,265
Ensembl chr14:24,505,353...24,508,265 		JBrowse link
G CTSG cathepsin G involved_in TAS Reactome Reactome:R-HSA-1474228 NCBI chr14:24,573,518...24,576,250
Ensembl chr14:24,573,518...24,576,250 		JBrowse link
G CTSK cathepsin K involved_in TAS Reactome Reactome:R-HSA-1474228 Reactome:R-HSA-1592389 NCBI chr 1:150,796,208...150,808,260
Ensembl chr 1:150,794,880...150,809,577 		JBrowse link
G CTSS cathepsin S involved_in TAS Reactome Reactome:R-HSA-1474228 NCBI chr 1:150,730,188...150,765,778
Ensembl chr 1:150,730,079...150,765,957 		JBrowse link
G CTSV cathepsin V involved_in TAS Reactome Reactome:R-HSA-1474228 Reactome:R-HSA-1592389 NCBI chr 9:97,029,677...97,039,643
Ensembl chr 9:97,029,677...97,156,556 		JBrowse link
G ELANE elastase, neutrophil expressed involved_in TAS Reactome Reactome:R-HSA-1474228 NCBI chr19:852,303...856,243
Ensembl chr19:851,014...856,247 		JBrowse link
G ENG endoglin involved_in IMP (PMID:18223685) BHF-UCL PMID:18223685 NCBI chr 9:127,815,016...127,854,658
Ensembl chr 9:127,811,130...127,854,773 		JBrowse link
G EXOC8 exocyst complex component 8 involved_in IMP (PMID:24344185) UniProt PMID:24344185 NCBI chr 1:231,332,753...231,337,852
Ensembl chr 1:231,332,753...231,337,852 		JBrowse link
G FLOT1 flotillin 1 involved_in IMP (PMID:21119006) UniProt PMID:21119006 NCBI chr 6:30,727,709...30,742,687
Ensembl chr 6:30,727,709...30,742,732 		JBrowse link
G FURIN furin, paired basic amino acid cleaving enzyme involved_in TAS Reactome Reactome:R-HSA-1592389 NCBI chr15:90,868,588...90,883,457
Ensembl chr15:90,868,588...90,883,564 		JBrowse link
G GSN gelsolin NOT|involved_in IMP (PMID:24236012) UniProt PMID:24236012 NCBI chr 9:121,201,483...121,332,842
Ensembl chr 9:121,207,794...121,332,843 		JBrowse link
G KIF9 kinesin family member 9 involved_in IMP (PMID:21119006) UniProt PMID:21119006 NCBI chr 3:47,227,998...47,282,799
Ensembl chr 3:47,227,998...47,283,451 		JBrowse link
G KLK4 kallikrein related peptidase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:22243248) Ensembl
MGI
GO_Central		 PMID:22243248 GO_REF:0000033 GO_REF:0000107 NCBI chr19:50,906,351...50,911,395
Ensembl chr19:50,906,351...50,911,395 		JBrowse link
G KLK5 kallikrein related peptidase 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:50,943,303...50,953,038
Ensembl chr19:50,943,303...50,953,093 		JBrowse link
G KLK7 kallikrein related peptidase 7 involved_in TAS Reactome Reactome:R-HSA-1474228 NCBI chr19:50,976,468...50,984,064
Ensembl chr19:50,976,468...50,984,099 		JBrowse link
G LAMC1 laminin subunit gamma 1 involved_in IMP (PMID:15159456) HGNC-UCL PMID:15159456 NCBI chr 1:183,023,420...183,145,592
Ensembl chr 1:183,023,420...183,145,592 		JBrowse link
G LCP1 lymphocyte cytosolic protein 1 involved_in IMP (PMID:24236012) UniProt PMID:24236012 NCBI chr13:46,125,923...46,182,177
Ensembl chr13:46,125,920...46,211,871 		JBrowse link
G MMP1 matrix metallopeptidase 1 involved_in TAS Reactome Reactome:R-HSA-1474228 Reactome:R-HSA-1592389 NCBI chr11:102,789,919...102,798,160
Ensembl chr11:102,789,401...102,798,160 		JBrowse link
G MMP10 matrix metallopeptidase 10 involved_in TAS Reactome Reactome:R-HSA-1474228 Reactome:R-HSA-1592389 NCBI chr11:102,770,502...102,780,628
Ensembl chr11:102,770,502...102,780,628 		JBrowse link
G MMP11 matrix metallopeptidase 11 involved_in TAS Reactome Reactome:R-HSA-1592389 NCBI chr22:23,772,849...23,784,316
Ensembl chr22:23,768,226...23,784,316 		JBrowse link
G MMP12 matrix metallopeptidase 12 involved_in TAS Reactome Reactome:R-HSA-1474228 NCBI chr11:102,862,736...102,874,982
Ensembl chr11:102,862,736...102,874,982 		JBrowse link
G MMP13 matrix metallopeptidase 13 involved_in IMP
IEA
TAS		 (PMID:8576151), (PMID:9065415) UniProt
Ensembl
Reactome		 PMID:8576151 PMID:9065415 GO_REF:0000107 Reactome:R-HSA-1474228 Reactome:R-HSA-1592389 NCBI chr11:102,942,995...102,955,732
Ensembl chr11:102,942,995...102,955,732 		JBrowse link
G MMP14 matrix metallopeptidase 14 involved_in TAS Reactome Reactome:R-HSA-1474228 Reactome:R-HSA-1592389 NCBI chr14:22,836,585...22,847,758
Ensembl chr14:22,836,560...22,849,041 		JBrowse link
G MMP15 matrix metallopeptidase 15 involved_in TAS Reactome Reactome:R-HSA-1474228 NCBI chr16:58,025,754...58,046,901
Ensembl chr16:58,025,754...58,046,901 		JBrowse link
G MMP19 matrix metallopeptidase 19 involved_in TAS Reactome Reactome:R-HSA-1474228 NCBI chr12:55,835,433...55,842,936
Ensembl chr12:55,835,433...55,842,966 		JBrowse link
G MMP2 matrix metallopeptidase 2 involved_in TAS (PMID:24970228) Reactome PMID:24970228 Reactome:R-HSA-1474228 Reactome:R-HSA-1592389 NCBI chr16:55,478,830...55,506,691
Ensembl chr16:55,389,700...55,506,691 		JBrowse link
G MMP20 matrix metallopeptidase 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22243248) Ensembl
MGI		 PMID:22243248 GO_REF:0000107 NCBI chr11:102,576,832...102,625,332
Ensembl chr11:102,576,832...102,625,332 		JBrowse link
G MMP3 matrix metallopeptidase 3 involved_in TAS Reactome Reactome:R-HSA-1474228 Reactome:R-HSA-1592389 NCBI chr11:102,835,801...102,843,609
Ensembl chr11:102,835,801...102,843,609 		JBrowse link
G MMP7 matrix metallopeptidase 7 involved_in TAS Reactome Reactome:R-HSA-1474228 Reactome:R-HSA-1592389 NCBI chr11:102,520,508...102,530,747
Ensembl chr11:102,520,508...102,530,750 		JBrowse link
G MMP8 matrix metallopeptidase 8 involved_in TAS Reactome Reactome:R-HSA-1474228 NCBI chr11:102,711,796...102,724,954
Ensembl chr11:102,711,796...102,727,050 		JBrowse link
G MMP9 matrix metallopeptidase 9 involved_in TAS Reactome Reactome:R-HSA-1474228 NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561 		JBrowse link
G NOXO1 NADPH oxidase organizer 1 involved_in IMP (PMID:19755710) UniProt PMID:19755710 NCBI chr16:1,978,917...1,981,469
Ensembl chr16:1,978,917...1,984,192 		JBrowse link
G PBXIP1 PBX homeobox interacting protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30659184) Ensembl
MGI		 PMID:30659184 GO_REF:0000107 NCBI chr 1:154,944,080...154,956,099
Ensembl chr 1:154,944,076...154,956,123 		JBrowse link
G PLG plasminogen involved_in IDA (PMID:14699093) BHF-UCL PMID:14699093 NCBI chr 6:160,702,193...160,754,097
Ensembl chr 6:160,702,194...160,754,097 		JBrowse link
G PRSS1 serine protease 1 involved_in TAS Reactome Reactome:R-HSA-1592389 NCBI chr 7:142,749,472...142,753,072
Ensembl chr 7:142,749,468...142,753,072 		JBrowse link
G PRSS2 serine protease 2 involved_in TAS Reactome Reactome:R-HSA-1592389 NCBI chr 7:142,770,970...142,774,560
Ensembl chr 7:142,760,398...142,774,564 		JBrowse link
G SH3PXD2B SH3 and PX domains 2B involved_in IMP (PMID:19755710) UniProt PMID:19755710 NCBI chr 5:172,325,181...172,454,525
Ensembl chr 5:172,325,000...172,454,525 		JBrowse link
G TMPRSS6 transmembrane serine protease 6 involved_in TAS Reactome Reactome:R-HSA-1474228 NCBI chr22:37,065,436...37,110,536
Ensembl chr22:37,065,436...37,109,713 		JBrowse link
G TPSAB1 tryptase alpha/beta 1 involved_in IDA (PMID:27068509) BHF-UCL PMID:27068509 NCBI chr16:1,240,705...1,242,554
Ensembl chr16:1,239,266...1,242,554 		JBrowse link
G WASHC1 WASH complex subunit 1 involved_in IMP (PMID:24344185) UniProt PMID:24344185 NCBI chr 9:14,513...30,487
Ensembl chr 9:14,475...73,865 		JBrowse link
G WDR72 WD repeat domain 72 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26247047) Ensembl
MGI		 PMID:26247047 GO_REF:0000107 NCBI chr15:53,513,741...53,762,878
Ensembl chr15:53,513,741...53,762,878 		JBrowse link
extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI3BP ABI family member 3 binding protein involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:18757743) Ensembl
MGI
GO_Central		 PMID:18757743 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:100,749,156...100,993,421
Ensembl chr 3:100,749,156...100,993,515 		JBrowse link
G ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr21:26,835,755...26,845,409
Ensembl chr21:26,835,755...26,845,409 		JBrowse link
G ADAMTS10 ADAM metallopeptidase with thrombospondin type 1 motif 10 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr19:8,580,240...8,610,715
Ensembl chr19:8,580,240...8,610,735 		JBrowse link
G ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif 12 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:33,523,535...33,891,990
Ensembl chr 5:33,523,535...33,892,019 		JBrowse link
G ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif 13 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 9:133,414,337...133,459,386
Ensembl chr 9:133,414,358...133,459,402 		JBrowse link
G ADAMTS14 ADAM metallopeptidase with thrombospondin type 1 motif 14 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr10:70,672,506...70,762,441
Ensembl chr10:70,672,506...70,762,441 		JBrowse link
G ADAMTS15 ADAM metallopeptidase with thrombospondin type 1 motif 15 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr11:130,448,645...130,476,645
Ensembl chr11:130,448,645...130,476,645 		JBrowse link
G ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif 16 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:5,140,330...5,320,304
Ensembl chr 5:5,140,330...5,320,304 		JBrowse link
G ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif 17 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr15:99,971,437...100,341,975
Ensembl chr15:99,971,437...100,342,005 		JBrowse link
G ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif 18 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr16:77,282,128...77,435,034
Ensembl chr16:77,247,813...77,435,034 		JBrowse link
G ADAMTS19 ADAM metallopeptidase with thrombospondin type 1 motif 19 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:129,460,298...129,738,683
Ensembl chr 5:129,460,281...129,738,683 		JBrowse link
G ADAMTS2 ADAM metallopeptidase with thrombospondin type 1 motif 2 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:179,110,853...179,345,461
Ensembl chr 5:179,110,853...179,345,461 		JBrowse link
G ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif 20 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:18454205) Ensembl
MGI
GO_Central
InterPro		 PMID:18454205 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr12:43,352,763...43,552,203
Ensembl chr12:43,353,866...43,552,203 		JBrowse link
G ADAMTS3 ADAM metallopeptidase with thrombospondin type 1 motif 3 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 4:72,280,969...72,569,221
Ensembl chr 4:72,280,969...72,569,221 		JBrowse link
G ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 1:161,184,302...161,199,054
Ensembl chr 1:161,184,302...161,199,054 		JBrowse link
G ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif 5 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr21:26,917,922...26,967,088
Ensembl chr21:26,917,922...26,967,088 		JBrowse link
G ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif 6 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 5:65,148,738...65,481,920
Ensembl chr 5:65,148,738...65,481,920 		JBrowse link
G ADAMTS7 ADAM metallopeptidase with thrombospondin type 1 motif 7 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr15:78,759,206...78,811,464
Ensembl chr15:78,759,206...78,811,464 		JBrowse link
G ADAMTS8 ADAM metallopeptidase with thrombospondin type 1 motif 8 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr11:130,404,923...130,428,609
Ensembl chr11:130,404,923...130,428,609 		JBrowse link
G ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 involved_in ISS
IBA
IEA		 BHF-UCL
GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:64,515,654...64,688,000
Ensembl chr 3:64,515,654...64,688,000 		JBrowse link
G ADAMTSL1 ADAMTS like 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:17,906,633...18,910,950
Ensembl chr 9:17,906,563...18,910,950 		JBrowse link
G ADAMTSL2 ADAMTS like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25762570) Ensembl
MGI
InterPro		 PMID:25762570 GO_REF:0000002 GO_REF:0000107 NCBI chr 9:133,532,164...133,575,519
Ensembl chr 9:133,532,164...133,575,519 		JBrowse link
G ADAMTSL3 ADAMTS like 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:83,654,123...84,039,842
Ensembl chr15:83,654,088...84,039,842 		JBrowse link
G ADAMTSL4 ADAMTS like 4 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:18757743) Ensembl
MGI
GO_Central		 PMID:18757743 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:150,549,408...150,560,937
Ensembl chr 1:150,549,369...150,560,937 		JBrowse link
G ADAMTSL5 ADAMTS like 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr19:1,505,022...1,513,019
Ensembl chr19:1,505,022...1,513,604 		JBrowse link
G AGT angiotensinogen acts_upstream_of_or_within ISO (PMID:9734405) MGI PMID:9734405 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576 		JBrowse link
G APBB1 amyloid beta precursor protein binding family B member 1 acts_upstream_of_or_within ISO (PMID:16407979) MGI PMID:16407979 NCBI chr11:6,395,124...6,419,453
Ensembl chr11:6,395,125...6,419,414 		JBrowse link
G APBB2 amyloid beta precursor protein binding family B member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16407979) Ensembl
MGI		 PMID:16407979 GO_REF:0000107 NCBI chr 4:40,810,027...41,214,542
Ensembl chr 4:40,810,027...41,216,714 		JBrowse link
G APLP1 amyloid beta precursor like protein 1 acts_upstream_of_or_within
involved_in		 ISS
IEA		 ARUK-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr19:35,868,574...35,879,792
Ensembl chr19:35,867,899...35,879,792 		JBrowse link
G APLP2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO (PMID:15385965) MGI PMID:15385965 NCBI chr11:130,069,894...130,144,805
Ensembl chr11:130,068,147...130,144,811 		JBrowse link
G APP amyloid beta precursor protein involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:15385965) Ensembl
MGI
UniProt		 PMID:15385965 GO_REF:0000024 GO_REF:0000107 NCBI chr21:25,880,550...26,171,128
Ensembl chr21:25,880,535...26,171,128 		JBrowse link
G ATP7A ATPase copper transporting alpha involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:1115218) UniProt
MGI		 PMID:1115218 GO_REF:0000024 NCBI chr  X:77,910,693...78,050,395
Ensembl chr  X:77,910,690...78,050,395 		JBrowse link
G ATXN1L ataxin 1 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22014525) Ensembl
MGI		 PMID:22014525 GO_REF:0000107 NCBI chr16:71,845,976...71,857,328
Ensembl chr16:71,808,439...71,885,268 		JBrowse link
G B4GALT1 beta-1,4-galactosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11900463) Ensembl
MGI		 PMID:11900463 GO_REF:0000107 NCBI chr 9:33,104,077...33,185,089
Ensembl chr 9:33,104,082...33,167,356 		JBrowse link
G BCL3 BCL3 transcription coactivator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10586052) Ensembl
MGI		 PMID:10586052 GO_REF:0000107 NCBI chr19:44,747,705...44,760,044
Ensembl chr19:44,747,705...44,760,044 		JBrowse link
G C6orf15 chromosome 6 open reading frame 15 involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:18757743) GO_Central
MGI		 PMID:18757743 GO_REF:0000033 NCBI chr 6:31,111,223...31,112,575
Ensembl chr 6:31,111,223...31,112,575 		JBrowse link
G CCDC80 coiled-coil domain containing 80 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:18757743) Ensembl
MGI
GO_Central		 PMID:18757743 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:112,596,797...112,641,143
Ensembl chr 3:112,596,797...112,649,530 		JBrowse link
G CCN1 cellular communication network factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 1:85,580,761...85,583,950
Ensembl chr 1:85,580,761...85,584,589 		JBrowse link
G COL10A1 collagen type X alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:116,118,909...116,217,144
Ensembl chr 6:116,118,909...116,158,747 		JBrowse link
G COL11A1 collagen type XI alpha 1 chain involved_in NAS
IBA		 (PMID:10486316) UniProt
GO_Central		 PMID:10486316 GO_REF:0000033 NCBI chr 1:102,876,473...103,108,522
Ensembl chr 1:102,876,467...103,108,872 		JBrowse link
G COL13A1 collagen type XIII alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:69,801,906...69,959,144
Ensembl chr10:69,801,880...69,964,275 		JBrowse link
G COL14A1 collagen type XIV alpha 1 chain involved_in NAS (PMID:9427527) UniProt PMID:9427527 NCBI chr 8:120,124,454...120,373,573
Ensembl chr 8:120,059,780...120,373,573 		JBrowse link
G COL15A1 collagen type XV alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:98,943,907...99,070,787
Ensembl chr 9:98,943,179...99,070,787 		JBrowse link
G COL16A1 collagen type XVI alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:31,652,263...31,704,017
Ensembl chr 1:31,652,263...31,704,319 		JBrowse link
G COL17A1 collagen type XVII alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:104,031,286...104,085,880
Ensembl chr10:104,031,286...104,085,880 		JBrowse link
G COL18A1 collagen type XVIII alpha 1 chain acts_upstream_of_or_within ISO (PMID:15254016) MGI PMID:15254016 NCBI chr21:45,405,165...45,513,720
Ensembl chr21:45,405,165...45,513,720 		JBrowse link
G COL19A1 collagen type XIX alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO
NAS		 (PMID:15302855)
(PMID:1639419)		 Ensembl
GO_Central
MGI
UniProt		 PMID:1639419 PMID:15302855 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:69,866,556...70,212,468
Ensembl chr 6:69,866,556...70,212,468 		JBrowse link
G COL1A1 collagen type I alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:50,184,101...50,201,631
Ensembl chr17:50,184,101...50,201,632 		JBrowse link
G COL1A2 collagen type I alpha 2 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:94,394,895...94,431,227
Ensembl chr 7:94,394,895...94,431,227 		JBrowse link
G COL22A1 collagen type XXII alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:138,588,235...138,914,041
Ensembl chr 8:138,588,235...138,914,041 		JBrowse link
G COL23A1 collagen type XXIII alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:178,237,618...178,590,393
Ensembl chr 5:178,237,476...178,590,393 		JBrowse link
G COL24A1 collagen type XXIV alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:85,729,233...86,156,984
Ensembl chr 1:85,729,233...86,156,943 		JBrowse link
G COL27A1 collagen type XXVII alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22206015) Ensembl
MGI		 PMID:22206015 GO_REF:0000107 NCBI chr 9:114,154,098...114,312,511
Ensembl chr 9:114,155,537...114,312,511 		JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:188,974,373...189,012,746
Ensembl chr 2:188,974,373...189,012,746 		JBrowse link
G COL4A1 collagen type IV alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:110,148,963...110,307,157
Ensembl chr13:110,148,963...110,307,202 		JBrowse link
G COL4A2 collagen type IV alpha 2 chain involved_in NAS
IBA		 (PMID:8317999) UniProt
GO_Central		 PMID:8317999 GO_REF:0000033 NCBI chr13:110,307,284...110,513,209
Ensembl chr13:110,305,812...110,513,209 		JBrowse link
G COL4A3 collagen type IV alpha 3 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:227,164,624...227,314,792
Ensembl chr 2:227,164,624...227,314,792 		JBrowse link
G COL4A5 collagen type IV alpha 5 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:108,439,838...108,697,545
Ensembl chr  X:108,439,838...108,697,545 		JBrowse link
G COL4A6 collagen type IV alpha 6 chain involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:10965041) Ensembl
GO_Central
MGI		 PMID:10965041 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:108,155,614...108,439,458
Ensembl chr  X:108,155,607...108,439,497 		JBrowse link
G COL5A2 collagen type V alpha 2 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:189,031,898...189,441,111
Ensembl chr 2:189,031,898...189,225,312 		JBrowse link
G COL5A3 collagen type V alpha 3 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:9,959,561...10,010,504
Ensembl chr19:9,959,561...10,010,504 		JBrowse link
G COL6A4P1 collagen type VI alpha 4 pseudogene 1 involved_in ISO (PMID:26571399) MGI PMID:26571399 NCBI chr 3:15,165,362...15,205,959
Ensembl chr 3:15,151,833...15,180,961
Ensembl chr 3:15,151,833...15,180,961 		JBrowse link
G COL7A1 collagen type VII alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:48,564,073...48,595,329
Ensembl chr 3:48,564,073...48,595,329 		JBrowse link
G COL8A1 collagen type VIII alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:99,638,594...99,799,217
Ensembl chr 3:99,638,475...99,799,226 		JBrowse link
G COL8A2 collagen type VIII alpha 2 chain involved_in NAS
IBA		 (PMID:2019595) UniProt
GO_Central		 PMID:2019595 GO_REF:0000033 NCBI chr 1:36,095,239...36,125,222
Ensembl chr 1:36,095,239...36,125,222 		JBrowse link
G COL9A1 collagen type IX alpha 1 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:70,215,061...70,303,084
Ensembl chr 6:70,216,040...70,303,084 		JBrowse link
G COL9A2 collagen type IX alpha 2 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:40,300,489...40,317,286
Ensembl chr 1:40,300,489...40,317,813 		JBrowse link
G COL9A3 collagen type IX alpha 3 chain involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:62,816,213...62,841,159
Ensembl chr20:62,816,244...62,841,159 		JBrowse link
G COLQ collagen like tail subunit of asymmetric acetylcholinesterase involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:15,450,133...15,521,706
Ensembl chr 3:15,450,133...15,521,751 		JBrowse link
G CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr16:84,819,985...84,909,508
Ensembl chr16:84,819,985...84,920,768 		JBrowse link
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21148564) Ensembl
MGI		 PMID:21148564 GO_REF:0000107 NCBI chr 8:19,404,161...19,757,908
Ensembl chr 8:19,404,161...19,758,029 		JBrowse link
G DMP1 dentin matrix acidic phosphoprotein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:18757743) InterPro
MGI
GO_Central
Ensembl		 PMID:18757743 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:87,650,280...87,664,357
Ensembl chr 4:87,650,280...87,664,361 		JBrowse link
G DNAJB6 DnaJ heat shock protein family (Hsp40) member B6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21972064) Ensembl
MGI		 PMID:21972064 GO_REF:0000107 NCBI chr 7:157,337,004...157,417,439
Ensembl chr 7:157,335,381...157,417,439 		JBrowse link
G ECM2 extracellular matrix protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:18757743) Ensembl
MGI
GO_Central		 PMID:18757743 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:92,493,547...92,559,106
Ensembl chr 9:92,493,554...92,536,655 		JBrowse link
G EGFL6 EGF like domain multiple 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr  X:13,569,601...13,633,575
Ensembl chr  X:13,569,601...13,633,575 		JBrowse link
G EGFLAM EGF like, fibronectin type III and laminin G domains involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 5:38,258,559...38,465,480
Ensembl chr 5:38,258,409...38,465,480 		JBrowse link
G ELF3 E74 like ETS transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11984530) Ensembl
MGI		 PMID:11984530 GO_REF:0000107 NCBI chr 1:202,010,587...202,017,183
Ensembl chr 1:202,007,945...202,017,183 		JBrowse link
G ELN elastin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 7:74,028,173...74,069,907
Ensembl chr 7:74,027,789...74,069,907 		JBrowse link
G EMILIN1 elastin microfibril interfacer 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 2:27,078,615...27,086,403
Ensembl chr 2:27,078,615...27,086,403 		JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9651581) Ensembl
MGI		 PMID:9651581 GO_REF:0000107 NCBI chr19:45,349,837...45,370,573
Ensembl chr19:45,349,837...45,370,918 		JBrowse link
G ERO1A endoplasmic reticulum oxidoreductase 1 alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22981861) Ensembl
MGI		 PMID:22981861 GO_REF:0000107 NCBI chr14:52,639,915...52,695,558
Ensembl chr14:52,639,915...52,695,900 		JBrowse link
G ERO1B endoplasmic reticulum oxidoreductase 1 beta acts_upstream_of_or_within ISO (PMID:22981861) MGI PMID:22981861 NCBI chr 1:236,215,101...236,281,958
Ensembl chr 1:236,214,681...236,282,019 		JBrowse link
G FBLN1 fibulin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI
InterPro		 PMID:18757743 GO_REF:0000002 GO_REF:0000107 NCBI chr22:45,502,883...45,601,135
Ensembl chr22:45,502,238...45,601,135 		JBrowse link
G FBLN2 fibulin 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:13,549,125...13,638,404
Ensembl chr 3:13,549,125...13,638,422 		JBrowse link
G FBLN5 fibulin 5 acts_upstream_of_or_within ISO (PMID:18757743) MGI PMID:18757743 NCBI chr14:91,869,411...91,947,694
Ensembl chr14:91,869,411...91,947,987 		JBrowse link
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31296900) Ensembl
MGI		 PMID:31296900 GO_REF:0000107 NCBI chr19:46,744,760...46,758,575
Ensembl chr19:46,746,046...46,776,988 		JBrowse link
G FN1 fibronectin 1 ISO RGD PMID:12388756 RGD:1358623 NCBI chr 2:215,360,865...215,436,068
Ensembl chr 2:215,360,440...215,436,073 		JBrowse link
G FOXF1 forkhead box F1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16439479) Ensembl
MGI		 PMID:16439479 GO_REF:0000107 NCBI chr16:86,510,527...86,515,422
Ensembl chr16:86,510,527...86,515,422 		JBrowse link
G FOXF2 forkhead box F2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16439479) Ensembl
MGI		 PMID:16439479 GO_REF:0000107 NCBI chr 6:1,389,576...1,395,603
Ensembl chr 6:1,389,576...1,395,603 		JBrowse link
G FURIN furin, paired basic amino acid cleaving enzyme involved_in TAS Reactome Reactome:R-HSA-1566948 NCBI chr15:90,868,588...90,883,457
Ensembl chr15:90,868,588...90,883,564 		JBrowse link
G GFAP glial fibrillary acidic protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11487638) Ensembl
MGI		 PMID:11487638 GO_REF:0000107 NCBI chr17:44,903,159...44,915,500
Ensembl chr17:44,903,159...44,916,937 		JBrowse link
G GFOD2 Gfo/Idh/MocA-like oxidoreductase domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:18757743) Ensembl
MGI
GO_Central		 PMID:18757743 GO_REF:0000033 GO_REF:0000107 NCBI chr16:67,674,536...67,719,316
Ensembl chr16:67,674,531...67,719,339 		JBrowse link
G HPSE2 heparanase 2 (inactive) involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:25510506) Ensembl
MGI
GO_Central		 PMID:25510506 GO_REF:0000033 GO_REF:0000107 NCBI chr10:98,457,077...99,315,951
Ensembl chr10:98,457,077...99,235,862 		JBrowse link
G HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr11:43,556,721...43,856,615
Ensembl chr11:43,680,680...43,856,617 		JBrowse link
G HSPG2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO (PMID:10579729) MGI PMID:10579729 NCBI chr 1:21,822,244...21,937,310
Ensembl chr 1:21,822,244...21,937,310 		JBrowse link
G IBSP integrin binding sialoprotein involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
ISS		 (PMID:18757743) Ensembl
MGI
GO_Central
UniProt		 PMID:18757743 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:87,799,554...87,812,435
Ensembl chr 4:87,799,554...87,812,435 		JBrowse link
G IDUA alpha-L-iduronidase acts_upstream_of_or_within ISO (PMID:25410057) MGI PMID:25410057 NCBI chr 4:986,997...1,008,351
Ensembl chr 4:986,997...1,004,564 		JBrowse link
G IMPG1 interphotoreceptor matrix proteoglycan 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32265257) Ensembl
MGI		 PMID:32265257 GO_REF:0000107 NCBI chr 6:75,921,114...76,072,662
Ensembl chr 6:75,921,114...76,072,678 		JBrowse link
G IMPG2 interphotoreceptor matrix proteoglycan 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32265257) Ensembl
MGI		 PMID:32265257 GO_REF:0000107 NCBI chr 3:101,222,546...101,320,575
Ensembl chr 3:101,222,546...101,320,575 		JBrowse link
G ITGA2 integrin subunit alpha 2 involved_in NAS (PMID:19693543) ComplexPortal PMID:19693543 NCBI chr 5:52,989,352...53,094,779
Ensembl chr 5:52,989,340...53,094,779 		JBrowse link
G ITGA8 integrin subunit alpha 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10742111) Ensembl
MGI		 PMID:10742111 GO_REF:0000107 NCBI chr10:15,513,954...15,719,922
Ensembl chr10:15,513,954...15,719,922 		JBrowse link
G ITGB1 integrin subunit beta 1 involved_in NAS (PMID:19693543) ComplexPortal PMID:19693543 NCBI chr10:32,900,318...32,958,230
Ensembl chr10:32,887,273...33,005,792 		JBrowse link
G ITIH1 inter-alpha-trypsin inhibitor heavy chain 1 acts_upstream_of_or_within ISO (PMID:17675295) MGI PMID:17675295 NCBI chr 3:52,777,599...52,792,068
Ensembl chr 3:52,777,595...52,792,068 		JBrowse link
G KAZALD1 Kazal type serine peptidase inhibitor domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr10:101,061,989...101,068,131
Ensembl chr10:101,061,989...101,068,131 		JBrowse link
G LGALS3 galectin 3 acts_upstream_of_or_within ISO (PMID:15800063) MGI PMID:15800063 NCBI chr14:55,129,252...55,145,430
Ensembl chr14:55,124,110...55,145,423 		JBrowse link
G MANSC4 MANSC domain containing 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:27,762,427...27,780,236
Ensembl chr12:27,762,427...27,780,236 		JBrowse link
G MARCOL MARCO like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:148,238,525...148,243,580
Ensembl chr 5:148,221,650...148,243,580 		JBrowse link
G MATN1 matrilin 1 involved_in NAS (PMID:10397755), (PMID:10660556) ComplexPortal PMID:10397755 PMID:10660556 NCBI chr 1:30,711,277...30,723,585
Ensembl chr 1:30,711,277...30,723,585 		JBrowse link
G MATN2 matrilin 2 involved_in NAS (PMID:10224097) ComplexPortal PMID:10224097 NCBI chr 8:97,869,064...98,036,724
Ensembl chr 8:97,868,840...98,036,724 		JBrowse link
G MATN3 matrilin 3 involved_in IEA
ISO
NAS		 (PMID:10660556) Ensembl
ComplexPortal		 PMID:10660556 GO_REF:0000107 GO_REF:0000114 NCBI chr 2:19,992,052...20,012,668
Ensembl chr 2:19,992,052...20,012,668 		JBrowse link
G MATN4 matrilin 4 involved_in NAS (PMID:11279097) ComplexPortal PMID:11279097 NCBI chr20:45,293,450...45,308,684
Ensembl chr20:45,293,445...45,308,529 		JBrowse link
G MIA MIA SH3 domain containing involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:11839810) GO_Central
MGI		 PMID:11839810 GO_REF:0000033 NCBI chr19:40,775,160...40,777,490
Ensembl chr19:40,771,648...40,777,490 		JBrowse link
G MMP1 matrix metallopeptidase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:102,789,919...102,798,160
Ensembl chr11:102,789,401...102,798,160 		JBrowse link
G MMP10 matrix metallopeptidase 10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:102,770,502...102,780,628
Ensembl chr11:102,770,502...102,780,628 		JBrowse link
G MMP11 matrix metallopeptidase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:18622425) Ensembl
MGI
GO_Central		 PMID:18622425 GO_REF:0000033 GO_REF:0000107 NCBI chr22:23,772,849...23,784,316
Ensembl chr22:23,768,226...23,784,316 		JBrowse link
G MMP12 matrix metallopeptidase 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:102,862,736...102,874,982
Ensembl chr11:102,862,736...102,874,982 		JBrowse link
G MMP13 matrix metallopeptidase 13 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:102,942,995...102,955,732
Ensembl chr11:102,942,995...102,955,732 		JBrowse link
G MMP14 matrix metallopeptidase 14 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:22,836,585...22,847,758
Ensembl chr14:22,836,560...22,849,041 		JBrowse link
G MMP15 matrix metallopeptidase 15 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:58,025,754...58,046,901
Ensembl chr16:58,025,754...58,046,901 		JBrowse link
G MMP16 matrix metallopeptidase 16 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:88,032,011...88,327,483
Ensembl chr 8:88,032,011...88,328,025 		JBrowse link
G MMP17 matrix metallopeptidase 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:131,828,393...131,851,771
Ensembl chr12:131,828,393...131,851,783 		JBrowse link
G MMP19 matrix metallopeptidase 19 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:55,835,433...55,842,936
Ensembl chr12:55,835,433...55,842,966 		JBrowse link
G MMP2 matrix metallopeptidase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:55,478,830...55,506,691
Ensembl chr16:55,389,700...55,506,691 		JBrowse link
G MMP20 matrix metallopeptidase 20 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:102,576,832...102,625,332
Ensembl chr11:102,576,832...102,625,332 		JBrowse link
G MMP21 matrix metallopeptidase 21 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:125,766,453...125,775,821
Ensembl chr10:125,753,580...125,775,821 		JBrowse link
G MMP23B matrix metallopeptidase 23B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:1,632,173...1,634,654
Ensembl chr 1:1,632,163...1,635,263 		JBrowse link
G MMP24 matrix metallopeptidase 24 involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:35,226,690...35,276,998
Ensembl chr20:35,226,690...35,276,998 		JBrowse link
G MMP25 matrix metallopeptidase 25 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:3,046,561...3,060,726
Ensembl chr16:3,046,062...3,060,726 		JBrowse link
G MMP26 matrix metallopeptidase 26 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:4,704,784...4,992,429
Ensembl chr11:4,704,784...4,992,431 		JBrowse link
G MMP27 matrix metallopeptidase 27 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:102,691,487...102,705,769
Ensembl chr11:102,691,487...102,705,769 		JBrowse link
G MMP28 matrix metallopeptidase 28 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:35,756,249...35,795,641
Ensembl chr17:35,756,249...35,795,707 		JBrowse link
G MMP3 matrix metallopeptidase 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:102,835,801...102,843,609
Ensembl chr11:102,835,801...102,843,609 		JBrowse link
G MMP7 matrix metallopeptidase 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:102,520,508...102,530,747
Ensembl chr11:102,520,508...102,530,750 		JBrowse link
G MMP8 matrix metallopeptidase 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:102,711,796...102,724,954
Ensembl chr11:102,711,796...102,727,050 		JBrowse link
G MMP9 matrix metallopeptidase 9 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15800063) Ensembl
MGI
GO_Central		 PMID:15800063 GO_REF:0000033 GO_REF:0000107 NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561 		JBrowse link
G MPZL3 myelin protein zero like 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15482472) Ensembl
MGI		 PMID:15482472 GO_REF:0000107 NCBI chr11:118,226,690...118,252,365
Ensembl chr11:118,226,690...118,252,365 		JBrowse link
G MYF5 myogenic factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16554364) Ensembl
MGI		 PMID:16554364 GO_REF:0000107 NCBI chr12:80,716,912...80,719,671
Ensembl chr12:80,716,912...80,719,671 		JBrowse link
G NDNF neuron derived neurotrophic factor involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
ISS		 (PMID:18757743) Ensembl
MGI
GO_Central
UniProt		 PMID:18757743 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:121,035,613...121,072,535
Ensembl chr 4:121,035,613...121,073,021 		JBrowse link
G NEPNP nephrocan, pseudogene acts_upstream_of_or_within ISO (PMID:18757743) MGI PMID:18757743 NCBI chr 6:117,602,928...117,645,087
Ensembl chr 6:117,633,706...117,645,087 		JBrowse link
G NF1 neurofibromin 1 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:16835260) HGNC-UCL
MGI
Ensembl		 PMID:16835260 GO_REF:0000024 GO_REF:0000107 NCBI chr17:31,094,927...31,377,677
Ensembl chr17:31,094,927...31,382,116 		JBrowse link
G NFKB2 nuclear factor kappa B subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10586052) Ensembl
MGI		 PMID:10586052 GO_REF:0000107 NCBI chr10:102,394,110...102,402,529
Ensembl chr10:102,394,110...102,402,524 		JBrowse link
G NID1 nidogen 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 1:235,975,830...236,065,090
Ensembl chr 1:235,975,830...236,065,109 		JBrowse link
G NOX1 NADPH oxidase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16386251) Ensembl
MGI		 PMID:16386251 GO_REF:0000107 NCBI chr  X:100,843,324...100,874,359
Ensembl chr  X:100,843,324...100,874,359 		JBrowse link
G NPHP3 nephrocystin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7539536) Ensembl
MGI		 PMID:7539536 GO_REF:0000107 NCBI chr 3:132,680,609...132,722,409
Ensembl chr 3:132,680,609...132,722,432 		JBrowse link
G NPNT nephronectin involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:15754038)
(PMID:18757743)		 BHF-UCL
MGI
Ensembl		 PMID:15754038 PMID:18757743 GO_REF:0000107 NCBI chr 4:105,895,471...105,971,671
Ensembl chr 4:105,894,775...106,004,027 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16424942) Ensembl
MGI		 PMID:16424942 GO_REF:0000107 NCBI chr 6:108,166,022...108,188,809
Ensembl chr 6:108,166,022...108,188,805 		JBrowse link
G OLFML2A olfactomedin like 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 9:124,777,133...124,814,882
Ensembl chr 9:124,777,133...124,814,885 		JBrowse link
G OLFML2B olfactomedin like 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 1:161,983,192...162,023,869
Ensembl chr 1:161,983,192...162,023,869 		JBrowse link
G OTOL1 otolin 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:161,496,808...161,503,942
Ensembl chr 3:161,496,808...161,503,942 		JBrowse link
G PAPLN papilin, proteoglycan like sulfated glycoprotein involved_in IEA InterPro GO_REF:0000002 NCBI chr14:73,235,805...73,274,623
Ensembl chr14:73,237,497...73,274,640 		JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15543606) Ensembl
MGI		 PMID:15543606 GO_REF:0000107 NCBI chr 4:54,229,293...54,298,245
Ensembl chr 4:54,229,280...54,298,245 		JBrowse link
G POMT1 protein O-mannosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15383666) Ensembl
MGI		 PMID:15383666 GO_REF:0000107 NCBI chr 9:131,502,918...131,523,799
Ensembl chr 9:131,502,789...131,523,806 		JBrowse link
G POSTN periostin involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:16314533) Ensembl
MGI
GO_Central		 PMID:16314533 GO_REF:0000033 GO_REF:0000107 NCBI chr13:37,562,585...37,598,768
Ensembl chr13:37,562,583...37,598,844 		JBrowse link
G PRDX4 peroxiredoxin 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22981861) Ensembl
MGI		 PMID:22981861 GO_REF:0000107 NCBI chr  X:23,667,493...23,686,397
Ensembl chr  X:23,664,262...23,686,397 		JBrowse link
G PTK2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:14642275) MGI PMID:14642275 NCBI chr 8:140,657,900...141,002,079
Ensembl chr 8:140,657,900...141,002,216 		JBrowse link
G PTX3 pentraxin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17675295) Ensembl
MGI		 PMID:17675295 GO_REF:0000107 NCBI chr 3:157,436,850...157,443,633
Ensembl chr 3:157,436,850...157,443,633 		JBrowse link
G PXDN peroxidasin involved_in IDA
IEA		 (PMID:19590037) UniProt
Ensembl		 PMID:19590037 GO_REF:0000107 NCBI chr 2:1,631,887...1,744,901
Ensembl chr 2:1,631,887...1,744,852 		JBrowse link
G RECK reversion inducing cysteine rich protein with kazal motifs involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:11747814) Ensembl
MGI
GO_Central		 PMID:11747814 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:36,036,913...36,124,455
Ensembl chr 9:36,036,913...36,124,455 		JBrowse link
G RXFP1 relaxin family peptide receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15256493) Ensembl
MGI		 PMID:15256493 GO_REF:0000107 NCBI chr 4:158,521,714...158,653,372
Ensembl chr 4:158,315,311...158,653,372 		JBrowse link
G SERAC1 serine active site containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 6:158,109,519...158,168,262
Ensembl chr 6:158,109,519...158,168,280 		JBrowse link
G SERPINB5 serpin family B member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18593913) Ensembl
MGI		 PMID:18593913 GO_REF:0000107 NCBI chr18:63,476,958...63,505,085
Ensembl chr18:63,476,958...63,505,085 		JBrowse link
G SLC39A8 solute carrier family 39 member 8 involved_in
acts_upstream_of		 IEA
IMP		 (PMID:29337306) Ensembl
UniProt		 PMID:29337306 GO_REF:0000107 NCBI chr 4:102,251,041...102,345,482
Ensembl chr 4:102,251,080...102,431,258 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (PMID:18267097) MGI PMID:18267097 NCBI chr19:10,961,030...11,062,273
Ensembl chr19:10,960,932...11,079,426 		JBrowse link
G SMOC1 SPARC related modular calcium binding 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:18757743) GO_Central
MGI		 PMID:18757743 GO_REF:0000033 NCBI chr14:69,879,416...70,032,366
Ensembl chr14:69,854,131...70,032,366 		JBrowse link
G SMOC2 SPARC related modular calcium binding 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:18757743) GO_Central
MGI		 PMID:18757743 GO_REF:0000033 NCBI chr 6:168,441,184...168,667,992
Ensembl chr 6:168,441,151...168,673,445 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24191021)
(PMID:17350610)		 Ensembl
MGI		 PMID:17350610 PMID:24191021 GO_REF:0000107 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416 		JBrowse link
G SPINK5 serine peptidase inhibitor Kazal type 5 involved_in TAS (PMID:15680911) UniProt PMID:15680911 NCBI chr 5:148,063,980...148,137,382
Ensembl chr 5:148,025,683...148,137,382 		JBrowse link
G SPINT1 serine peptidase inhibitor, Kunitz type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:17174946) Ensembl
MGI
GO_Central		 PMID:17174946 GO_REF:0000033 GO_REF:0000107 NCBI chr15:40,844,048...40,858,207
Ensembl chr15:40,844,018...40,858,207 		JBrowse link
G SPOCK2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
NAS		 (PMID:18757743)
(PMID:10386950)		 Ensembl
MGI
UniProt		 PMID:10386950 PMID:18757743 GO_REF:0000107 NCBI chr10:72,059,034...72,089,032
Ensembl chr10:72,059,034...72,089,032 		JBrowse link
G ST7 suppression of tumorigenicity 7 involved_in NAS (PMID:16474848) BHF-UCL PMID:16474848 NCBI chr 7:116,953,501...117,230,176
Ensembl chr 7:116,953,238...117,230,176 		JBrowse link
G TGFB2 transforming growth factor beta 2 acts_upstream_of_or_within ISO (PMID:11784073), (PMID:15528466) MGI PMID:11784073 PMID:15528466 NCBI chr 1:218,345,336...218,444,619
Ensembl chr 1:218,345,336...218,444,619 		JBrowse link
G TGFBI transforming growth factor beta induced involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:18757743) Ensembl
MGI
GO_Central		 PMID:18757743 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:136,028,988...136,063,818
Ensembl chr 5:136,028,988...136,063,818 		JBrowse link
G THSD4 thrombospondin type 1 domain containing 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:71,096,894...71,783,383
Ensembl chr15:71,096,952...71,783,383 		JBrowse link
G TNF tumor necrosis factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15381731) Ensembl
MGI		 PMID:15381731 GO_REF:0000107 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336 		JBrowse link
G TNFRSF11B TNF receptor superfamily member 11b involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 8:118,923,557...118,951,885
Ensembl chr 8:118,923,557...118,951,885 		JBrowse link
G TNR tenascin R involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10341229), (PMID:11077416), (PMID:16870730) Ensembl
MGI		 PMID:10341229 PMID:11077416 PMID:16870730 GO_REF:0000107 NCBI chr 1:175,315,194...175,743,595
Ensembl chr 1:175,315,194...175,743,595 		JBrowse link
G TNXB tenascin XB involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15242785) Ensembl
MGI		 PMID:15242785 GO_REF:0000107 NCBI chr 6:32,041,153...32,109,338
Ensembl chr 6:32,041,153...32,115,334 		JBrowse link
G VHL von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO (PMID:16537898) MGI PMID:16537898 NCBI chr 3:10,141,778...10,153,667
Ensembl chr 3:10,141,778...10,153,667 		JBrowse link
G VIT vitrin involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:18757743) Ensembl
MGI
GO_Central		 PMID:18757743 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:36,696,707...36,814,794
Ensembl chr 2:36,696,690...36,814,794 		JBrowse link
G VTN vitronectin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr17:28,367,284...28,370,307
Ensembl chr17:28,367,284...28,373,091 		JBrowse link
G VWA1 von Willebrand factor A domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19279005)
(PMID:18757743)		 Ensembl
MGI		 PMID:18757743 PMID:19279005 GO_REF:0000107 NCBI chr 1:1,435,690...1,442,882
Ensembl chr 1:1,434,861...1,442,882 		JBrowse link
G WDR72 WD repeat domain 72 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:35181734) MGI
Ensembl		 PMID:35181734 GO_REF:0000107 NCBI chr15:53,513,741...53,762,878
Ensembl chr15:53,513,741...53,762,878 		JBrowse link
G WNT3A Wnt family member 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17943183) Ensembl
MGI		 PMID:17943183 GO_REF:0000107 NCBI chr 1:228,006,998...228,061,271
Ensembl chr 1:228,006,998...228,061,271 		JBrowse link
gene expression involved in extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (PMID:23900597) MGI PMID:23900597 NCBI chr 4:87,608,529...87,616,873
Ensembl chr 4:87,608,529...87,616,873 		JBrowse link
G PBXIP1 PBX homeobox interacting protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30659184) Ensembl
MGI		 PMID:30659184 GO_REF:0000107 NCBI chr 1:154,944,080...154,956,099
Ensembl chr 1:154,944,076...154,956,123 		JBrowse link
G ZNF469 zinc finger protein 469 acts_upstream_of_or_within ISO (PMID:34368841) MGI PMID:34368841 NCBI chr16:88,100,931...88,440,753
Ensembl chr16:88,382,959...88,440,757 		JBrowse link
glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL4A3 collagen type IV alpha 3 chain involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:227,164,624...227,314,792
Ensembl chr 2:227,164,624...227,314,792 		JBrowse link
G COL4A4 collagen type IV alpha 4 chain involved_in
acts_upstream_of_or_within		 IMP
ISO
IBA
IEA		 (PMID:17942953), (PMID:19675380)
(PMID:10534397)		 UniProt
MGI
GO_Central
Ensembl		 PMID:10534397 PMID:17942953 PMID:19675380 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:226,967,360...227,164,488
Ensembl chr 2:227,002,714...227,164,453 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18480751) Ensembl
MGI		 PMID:18480751 GO_REF:0000107 NCBI chr 8:117,794,490...118,111,826
Ensembl chr 8:117,794,490...118,111,826 		JBrowse link
G MPV17 mitochondrial inner membrane protein MPV17 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:27,309,492...27,323,097
Ensembl chr 2:27,309,492...27,325,680 		JBrowse link
G MYO1E myosin IE involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:59,132,434...59,372,871
Ensembl chr15:59,132,434...59,372,871 		JBrowse link
G NID1 nidogen 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14566019) Ensembl
MGI		 PMID:14566019 GO_REF:0000107 NCBI chr 1:235,975,830...236,065,090
Ensembl chr 1:235,975,830...236,065,109 		JBrowse link
G NPHS1 NPHS1 adhesion molecule, nephrin involved_in IEP (PMID:17464107) UniProt PMID:17464107 NCBI chr19:35,825,372...35,852,504
Ensembl chr19:35,825,372...35,869,287 		JBrowse link
G SULF1 sulfatase 1 involved_in ISS
IBA
IEA		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:69,466,781...69,660,912
Ensembl chr 8:69,466,624...69,660,915 		JBrowse link
G SULF2 sulfatase 2 involved_in ISS
IBA
IEA		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr20:47,657,406...47,786,627
Ensembl chr20:47,656,197...47,786,616 		JBrowse link
G WT1 WT1 transcription factor involved_in IMP (PMID:19205749) UniProt PMID:19205749 NCBI chr11:32,387,775...32,435,539
Ensembl chr11:32,387,775...32,435,564 		JBrowse link
intercellular bridge organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TEX14 testis expressed 14, intercellular bridge forming factor involved_in IEA
IBA
ISS		 InterPro
GO_Central
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr17:58,556,678...58,692,045
Ensembl chr17:58,556,678...58,692,055 		JBrowse link
metanephric glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16886065), (PMID:7670489) Ensembl
MGI		 PMID:7670489 PMID:16886065 GO_REF:0000107 NCBI chr 3:49,121,114...49,133,050
Ensembl chr 3:49,121,114...49,133,118 		JBrowse link
negative regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHADL chondroadherin like involved_in IDA (PMID:25451920) UniProt PMID:25451920 NCBI chr22:41,229,513...41,240,931
Ensembl chr22:41,229,510...41,240,931 		JBrowse link
G EMILIN1 elastin microfibril interfacer 1 involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:27,078,615...27,086,403
Ensembl chr 2:27,078,615...27,086,403 		JBrowse link
G MIR29B1 microRNA 29b-1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 7:130,877,459...130,877,539
Ensembl chr 7:130,877,459...130,877,539 		JBrowse link
G MIR29B2 microRNA 29b-2 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 1:207,802,443...207,802,523
Ensembl chr 1:207,802,443...207,802,523 		JBrowse link
negative regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANTXR1 ANTXR cell adhesion molecule 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25572963) Ensembl
MGI		 PMID:25572963 GO_REF:0000107 NCBI chr 2:69,013,144...69,249,327
Ensembl chr 2:69,013,176...69,249,327 		JBrowse link
G MIR145 microRNA 145 acts_upstream_of
involved_in		 IGI
IMP		 (PMID:25323858)
(PMID:25704091)		 BHF-UCL PMID:25323858 PMID:25704091 NCBI chr 5:149,430,646...149,430,733
Ensembl chr 5:149,430,646...149,430,733 		JBrowse link
G MIR18A microRNA 18a involved_in IMP (PMID:28131417) BHF-UCL PMID:28131417 NCBI chr13:91,350,751...91,350,821
Ensembl chr13:91,350,751...91,350,821 		JBrowse link
G MIR19A microRNA 19a acts_upstream_of IDA (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr13:91,350,891...91,350,972
Ensembl chr13:91,350,891...91,350,972 		JBrowse link
G MIR19B1 microRNA 19b-1 acts_upstream_of IDA (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr13:91,351,192...91,351,278
Ensembl chr13:91,351,192...91,351,278 		JBrowse link
G MIR19B2 microRNA 19b-2 acts_upstream_of IDA (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr  X:134,169,671...134,169,766
Ensembl chr  X:134,169,671...134,169,766 		JBrowse link
G MIR27B microRNA 27b acts_upstream_of IDA (PMID:28095798) BHF-UCL PMID:28095798 NCBI chr 9:95,085,445...95,085,541
Ensembl chr 9:95,085,445...95,085,541 		JBrowse link
G MIR29B1 microRNA 29b-1 involved_in NAS (PMID:22269326) BHF-UCL PMID:22269326 NCBI chr 7:130,877,459...130,877,539
Ensembl chr 7:130,877,459...130,877,539 		JBrowse link
G MIR29B2 microRNA 29b-2 involved_in NAS (PMID:22269326) BHF-UCL PMID:22269326 NCBI chr 1:207,802,443...207,802,523
Ensembl chr 1:207,802,443...207,802,523 		JBrowse link
G MIR483 microRNA 483 acts_upstream_of IDA (PMID:26747772) BHF-UCL PMID:26747772 NCBI chr11:2,134,134...2,134,209
Ensembl chr11:2,134,134...2,134,209 		JBrowse link
G MIR9-1 microRNA 9-1 acts_upstream_of IMP (PMID:26315535) BHF-UCL PMID:26315535 NCBI chr 1:156,420,341...156,420,429
Ensembl chr 1:156,420,341...156,420,429 		JBrowse link
G MIR9-2 microRNA 9-2 acts_upstream_of IMP (PMID:26315535) BHF-UCL PMID:26315535 NCBI chr 5:88,666,853...88,666,939
Ensembl chr 5:88,666,853...88,666,939 		JBrowse link
G MIR9-3 microRNA 9-3 acts_upstream_of IMP (PMID:26315535) BHF-UCL PMID:26315535 NCBI chr15:89,368,017...89,368,106
Ensembl chr15:89,368,017...89,368,106 		JBrowse link
G MIR98 microRNA 98 acts_upstream_of IMP (PMID:28251559) BHF-UCL PMID:28251559 NCBI chr  X:53,556,223...53,556,341
Ensembl chr  X:53,556,223...53,556,341 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in IDA (PMID:25704091) BHF-UCL PMID:25704091 NCBI chr 3:12,287,368...12,434,344
Ensembl chr 3:12,287,368...12,434,356 		JBrowse link
G TGFBR3 transforming growth factor beta receptor 3 involved_in IMP (PMID:30729664) BHF-UCL PMID:30729664 NCBI chr 1:91,680,343...91,906,002
Ensembl chr 1:91,680,343...91,906,335 		JBrowse link
negative regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADTRP androgen dependent TFPI regulating protein involved_in IMP (PMID:28341552) BHF-UCL PMID:28341552 NCBI chr 6:11,713,523...11,778,803
Ensembl chr 6:11,712,054...11,807,046 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048 		JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:6,328,771...6,342,076
Ensembl chr12:6,328,757...6,342,114 		JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:12,166,991...12,209,220
Ensembl chr 1:12,166,991...12,209,228 		JBrowse link
negative regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CST3 cystatin C involved_in IC
IMP		 (PMID:7890620)
(PMID:10545518)		 BHF-UCL PMID:7890620 PMID:10545518 NCBI chr20:23,626,706...23,637,955
Ensembl chr20:23,626,706...23,638,473 		JBrowse link
G DPP4 dipeptidyl peptidase 4 involved_in IDA (PMID:16651416) UniProt PMID:16651416 NCBI chr 2:161,992,245...162,074,215
Ensembl chr 2:161,992,245...162,074,394 		JBrowse link
G FAP fibroblast activation protein alpha involved_in IDA (PMID:16651416) UniProt PMID:16651416 NCBI chr 2:162,170,684...162,243,445
Ensembl chr 2:162,170,684...162,245,151 		JBrowse link
G MIR29B1 microRNA 29b-1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 7:130,877,459...130,877,539
Ensembl chr 7:130,877,459...130,877,539 		JBrowse link
G MIR29B2 microRNA 29b-2 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 1:207,802,443...207,802,523
Ensembl chr 1:207,802,443...207,802,523 		JBrowse link
G MIR98 microRNA 98 involved_in IDA (PMID:26587789) ARUK-UCL PMID:26587789 NCBI chr  X:53,556,223...53,556,341
Ensembl chr  X:53,556,223...53,556,341 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in TAS (PMID:22269326) BHF-UCL PMID:22269326 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922 		JBrowse link
negative regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAP fibroblast activation protein alpha involved_in IDA (PMID:10455171) UniProt PMID:10455171 NCBI chr 2:162,170,684...162,243,445
Ensembl chr 2:162,170,684...162,245,151 		JBrowse link
polarized secretion of basement membrane proteins in epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:42,456,757...42,589,746
Ensembl chr12:42,456,757...42,590,355 		JBrowse link
positive regulation of basement membrane assembly involved in embryonic body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLASP1 cytoplasmic linker associated protein 1 involved_in IGI
IMP		 (PMID:23940118) UniProt PMID:23940118 NCBI chr 2:121,337,776...121,649,462
Ensembl chr 2:121,337,776...121,649,476 		JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in IMP (PMID:23940118) UniProt PMID:23940118 NCBI chr 3:33,496,245...33,718,254
Ensembl chr 3:33,496,245...33,718,356 		JBrowse link
G DAG1 dystroglycan 1 involved_in IMP (PMID:23940118) UniProt PMID:23940118 NCBI chr 3:49,468,948...49,535,615
Ensembl chr 3:49,468,713...49,535,618 		JBrowse link
G PHLDB1 pleckstrin homology like domain family B member 1 involved_in IGI
IMP		 (PMID:23940118) UniProt PMID:23940118 NCBI chr11:118,606,436...118,658,028
Ensembl chr11:118,606,440...118,658,031 		JBrowse link
G PHLDB2 pleckstrin homology like domain family B member 2 involved_in IMP
IGI		 (PMID:23940118) UniProt PMID:23940118 NCBI chr 3:111,732,496...111,976,517
Ensembl chr 3:111,732,497...111,976,517 		JBrowse link
positive regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COLGALT1 collagen beta(1-O)galactosyltransferase 1 involved_in IMP (PMID:27402836) UniProt PMID:27402836 NCBI chr19:17,555,649...17,583,157
Ensembl chr19:17,555,649...17,583,162 		JBrowse link
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr11:65,866,441...65,872,800
Ensembl chr11:65,866,441...65,873,592 		JBrowse link
G RB1 RB transcriptional corepressor 1 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:48,303,751...48,481,890
Ensembl chr13:48,303,744...48,599,436 		JBrowse link
G TNXB tenascin XB involved_in IDA (PMID:17033827) ComplexPortal PMID:17033827 NCBI chr 6:32,041,153...32,109,338
Ensembl chr 6:32,041,153...32,115,334 		JBrowse link
positive regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen acts_upstream_of IDA (PMID:30729664) BHF-UCL PMID:30729664 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576 		JBrowse link
G EMILIN1 elastin microfibril interfacer 1 involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:27,078,615...27,086,403
Ensembl chr 2:27,078,615...27,086,403 		JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:27488450 GO_REF:0000107 RGD:152995505 NCBI chr 1:11,674,480...11,691,830
Ensembl chr 1:11,658,918...11,691,811 		JBrowse link
G MIR27B microRNA 27b acts_upstream_of IDA (PMID:30729664) BHF-UCL PMID:30729664 NCBI chr 9:95,085,445...95,085,541
Ensembl chr 9:95,085,445...95,085,541 		JBrowse link
G RGCC regulator of cell cycle involved_in IDA (PMID:21307346) BHF-UCL PMID:21307346 NCBI chr13:41,457,550...41,470,871
Ensembl chr13:41,457,550...41,470,871 		JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of		 IDA
IMP		 (PMID:21307346)
(PMID:30729664)		 BHF-UCL PMID:21307346 PMID:30729664 NCBI chr15:67,065,602...67,195,169
Ensembl chr15:67,063,763...67,195,173 		JBrowse link
G SMAD4 SMAD family member 4 involved_in IMP (PMID:26747772) BHF-UCL PMID:26747772 NCBI chr18:51,030,213...51,085,042
Ensembl chr18:51,028,528...51,085,045 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20881014) Ensembl
MGI		 PMID:20881014 GO_REF:0000107 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in
acts_upstream_of		 TAS
NAS
ISS
IEA		 (PMID:22269326)
(PMID:27098600), (PMID:28095798)
(PMID:24279830)		 BHF-UCL
Ensembl		 PMID:22269326 PMID:24279830 PMID:27098600 PMID:28095798 GO_REF:0000107 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 acts_upstream_of IMP (PMID:28251559) BHF-UCL PMID:28251559 NCBI chr 9:99,103,647...99,154,192
Ensembl chr 9:99,104,038...99,154,192 		JBrowse link
positive regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:21419085 RGD:5129171 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576 		JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr20:6,767,686...6,780,246
Ensembl chr20:6,767,686...6,780,246 		JBrowse link
G CPB2 carboxypeptidase B2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:23369837 GO_REF:0000107 RGD:7243115 NCBI chr13:46,053,186...46,105,033
Ensembl chr13:46,053,186...46,105,033 		JBrowse link
G IER3IP1 immediate early response 3 interacting protein 1 involved_in IMP (PMID:33122427) UniProt PMID:33122427 NCBI chr18:47,152,834...47,176,364
Ensembl chr18:47,152,834...47,176,364 		JBrowse link
G RGCC regulator of cell cycle involved_in IDA (PMID:19158077) BHF-UCL PMID:19158077 NCBI chr13:41,457,550...41,470,871
Ensembl chr13:41,457,550...41,470,871 		JBrowse link
positive regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARMIL2 capping protein regulator and myosin 1 linker 2 involved_in IDA (PMID:26466680), (PMID:26578515) UniProt PMID:26466680 PMID:26578515 NCBI chr16:67,645,144...67,657,569
Ensembl chr16:67,644,988...67,657,569 		JBrowse link
G CLASP1 cytoplasmic linker associated protein 1 involved_in IMP (PMID:24859005) UniProt PMID:24859005 NCBI chr 2:121,337,776...121,649,462
Ensembl chr 2:121,337,776...121,649,476 		JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in IMP (PMID:24859005) UniProt PMID:24859005 NCBI chr 3:33,496,245...33,718,254
Ensembl chr 3:33,496,245...33,718,356 		JBrowse link
G DDR2 discoidin domain receptor tyrosine kinase 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:162,630,863...162,787,405
Ensembl chr 1:162,631,373...162,787,405 		JBrowse link
G FSCN1 fascin actin-bundling protein 1 involved_in IDA (PMID:20137952) UniProt PMID:20137952 NCBI chr 7:5,592,816...5,606,655
Ensembl chr 7:5,592,816...5,606,655 		JBrowse link
G IL6 interleukin 6 involved_in IMP (PMID:26587789) ARUK-UCL PMID:26587789 NCBI chr 7:22,727,200...22,731,998
Ensembl chr 7:22,725,884...22,732,002 		JBrowse link
G MELTF melanotransferrin involved_in IDA (PMID:16713448) UniProt PMID:16713448 NCBI chr 3:197,001,740...197,029,817
Ensembl chr 3:196,980,590...197,029,835 		JBrowse link
G PDPN podoplanin involved_in IDA (PMID:25486435) UniProt PMID:25486435 NCBI chr 1:13,583,757...13,617,957
Ensembl chr 1:13,583,465...13,617,957 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in ISO (MGI:5688835|PMID:21984612)
(PMID:21984612)		 UniProt PMID:21984612 MGI:5688835 NCBI chr 1:218,345,336...218,444,619
Ensembl chr 1:218,345,336...218,444,619 		JBrowse link
positive regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO
IEA		 RGD
Ensembl		 PMID:19846571 GO_REF:0000107 RGD:8693597 NCBI chr 9:130,713,043...130,887,675
Ensembl chr 9:130,713,043...130,887,675 		JBrowse link
G CFLAR CASP8 and FADD like apoptosis regulator involved_in ISO
IEA		 RGD
Ensembl		 PMID:24691542 GO_REF:0000107 RGD:11341715 NCBI chr 2:201,116,164...201,176,687
Ensembl chr 2:201,116,154...201,176,687 		JBrowse link
G CYP2J2 cytochrome P450 family 2 subfamily J member 2 ISO RGD PMID:29656108 RGD:150520032 NCBI chr 1:59,893,308...59,969,212
Ensembl chr 1:59,893,308...59,926,773 		JBrowse link
G RB1 RB transcriptional corepressor 1 involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:48,303,751...48,481,890
Ensembl chr13:48,303,744...48,599,436 		JBrowse link
G RUNX1 RUNX family transcription factor 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr21:34,787,801...35,049,302
Ensembl chr21:34,787,801...36,004,667 		JBrowse link
regulation of basement membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMA1 laminin subunit alpha 1 involved_in NAS (PMID:2119632) ComplexPortal PMID:2119632 NCBI chr18:6,941,742...7,117,797
Ensembl chr18:6,941,742...7,117,797 		JBrowse link
G LAMA2 laminin subunit alpha 2 involved_in NAS (PMID:2119632) ComplexPortal PMID:2119632 NCBI chr 6:128,883,138...129,516,566
Ensembl chr 6:128,883,138...129,516,566 		JBrowse link
G LAMB1 laminin subunit beta 1 involved_in NAS (PMID:2119632) ComplexPortal PMID:2119632 NCBI chr 7:107,923,799...108,003,161
Ensembl chr 7:107,923,799...108,003,213 		JBrowse link
G LAMB2 laminin subunit beta 2 involved_in NAS (PMID:2119632) ComplexPortal PMID:2119632 NCBI chr 3:49,121,114...49,133,050
Ensembl chr 3:49,121,114...49,133,118 		JBrowse link
G LAMC1 laminin subunit gamma 1 involved_in NAS (PMID:2119632) ComplexPortal PMID:2119632 NCBI chr 1:183,023,420...183,145,592
Ensembl chr 1:183,023,420...183,145,592 		JBrowse link
G NID1 nidogen 1 involved_in NAS (PMID:2119632) ComplexPortal PMID:2119632 NCBI chr 1:235,975,830...236,065,090
Ensembl chr 1:235,975,830...236,065,109 		JBrowse link
regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AEBP1 AE binding protein 1 involved_in IDA (PMID:29606302) UniProt PMID:29606302 NCBI chr 7:44,104,345...44,114,560
Ensembl chr 7:44,104,345...44,114,562 		JBrowse link
G COL6A1 collagen type VI alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20951202) Ensembl
MGI		 PMID:20951202 GO_REF:0000107 NCBI chr21:45,981,770...46,005,048
Ensembl chr21:45,981,770...46,005,050 		JBrowse link
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr11:65,866,441...65,872,800
Ensembl chr11:65,866,441...65,873,592 		JBrowse link
regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen involved_in IGI (PMID:17416596) BHF-UCL PMID:17416596 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576 		JBrowse link
G HAS2 hyaluronan synthase 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:27094859 GO_REF:0000107 RGD:12910548 NCBI chr 8:121,612,116...121,641,440
Ensembl chr 8:121,612,116...121,641,440 		JBrowse link
G NOTCH1 notch receptor 1 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048 		JBrowse link
G TIE1 tyrosine kinase with immunoglobulin like and EGF like domains 1 involved_in
acts_upstream_of		 IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:43,300,982...43,323,108
Ensembl chr 1:43,300,982...43,323,108 		JBrowse link
regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RIC1 RIC1 homolog, RAB6A GEF complex partner 1 involved_in IMP (PMID:31932796) UniProt PMID:31932796 NCBI chr 9:5,629,107...5,778,633
Ensembl chr 9:5,629,025...5,776,557 		JBrowse link
regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDR1 discoidin domain receptor tyrosine kinase 1 involved_in IMP
IEA		 (PMID:12065315) UniProt
Ensembl		 PMID:12065315 GO_REF:0000107 NCBI chr 6:30,880,970...30,900,156
Ensembl chr 6:30,876,421...30,900,156 		JBrowse link
G DDR2 discoidin domain receptor tyrosine kinase 2 involved_in TAS (PMID:16626936) UniProt PMID:16626936 NCBI chr 1:162,630,863...162,787,405
Ensembl chr 1:162,631,373...162,787,405 		JBrowse link
G ETS1 ETS proto-oncogene 1, transcription factor ISO RGD PMID:16738537 RGD:2313717 NCBI chr11:128,458,765...128,587,558
Ensembl chr11:128,458,761...128,587,558 		JBrowse link
G FGFR4 fibroblast growth factor receptor 4 involved_in IMP (PMID:20876804) UniProt PMID:20876804 NCBI chr 5:177,086,915...177,098,144
Ensembl chr 5:177,086,905...177,098,144 		JBrowse link
G LRP1 LDL receptor related protein 1 involved_in TAS (PMID:14645246) ParkinsonsUK-UCL PMID:14645246 NCBI chr12:57,128,483...57,213,361
Ensembl chr12:57,128,483...57,213,361 		JBrowse link
G MIR195 microRNA 195 involved_in ISS (PMID:25201911) ARUK-UCL PMID:25201911 NCBI chr17:7,017,615...7,017,701
Ensembl chr17:7,017,615...7,017,701 		JBrowse link
regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20980600) Ensembl
MGI		 PMID:20980600 GO_REF:0000107 NCBI chr 9:130,713,043...130,887,675
Ensembl chr 9:130,713,043...130,887,675 		JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chr 1:179,099,330...179,229,677
Ensembl chr 1:179,099,330...179,229,684 		JBrowse link
G ANGPTL7 angiopoietin like 7 involved_in IMP (PMID:21199193) UniProt PMID:21199193 NCBI chr 1:11,189,355...11,195,981
Ensembl chr 1:11,189,355...11,195,981 		JBrowse link
G AXIN2 axin 2 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:65,528,563...65,561,648
Ensembl chr17:65,528,563...65,561,648 		JBrowse link
G ITGB3 integrin subunit beta 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22984613) Ensembl
MGI		 PMID:22984613 GO_REF:0000107 NCBI chr17:47,253,827...47,313,743
Ensembl chr17:47,253,827...47,313,743 		JBrowse link
G LEMD3 LEM domain containing 3 acts_upstream_of_or_within ISO (PMID:16943282) MGI PMID:16943282 NCBI chr12:65,169,583...65,248,355
Ensembl chr12:65,169,583...65,248,355 		JBrowse link
G MIR21 microRNA 21 acts_upstream_of IDA (PMID:18591254) BHF-UCL PMID:18591254 NCBI chr17:59,841,266...59,841,337
Ensembl chr17:59,841,266...59,841,337 		JBrowse link
G PRDM5 PR/SET domain 5 involved_in IMP (PMID:21664999) ARUK-UCL PMID:21664999 NCBI chr 4:120,684,291...120,922,726
Ensembl chr 4:120,684,919...120,922,870 		JBrowse link
G RECK reversion inducing cysteine rich protein with kazal motifs involved_in IMP (PMID:18591254) BHF-UCL PMID:18591254 NCBI chr 9:36,036,913...36,124,455
Ensembl chr 9:36,036,913...36,124,455 		JBrowse link
G SLC2A10 solute carrier family 2 member 10 acts_upstream_of_or_within IMP (PMID:26376865) ARUK-UCL PMID:26376865 NCBI chr20:46,708,320...46,736,347
Ensembl chr20:46,709,649...46,736,347 		JBrowse link
G TCF15 transcription factor 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24038871) Ensembl
MGI		 PMID:24038871 GO_REF:0000107 NCBI chr20:604,257...610,309
Ensembl chr20:604,257...610,309 		JBrowse link
G TGFB2 transforming growth factor beta 2 acts_upstream_of_or_within ISO (PMID:21780244) MGI PMID:21780244 NCBI chr 1:218,345,336...218,444,619
Ensembl chr 1:218,345,336...218,444,619 		JBrowse link
G ZNF469 zinc finger protein 469 involved_in IMP (PMID:21664999) ARUK-UCL PMID:21664999 NCBI chr16:88,100,931...88,440,753
Ensembl chr16:88,382,959...88,440,757 		JBrowse link
vitelline membrane formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17881493) Ensembl
MGI		 PMID:17881493 GO_REF:0000107 NCBI chr 2:219,054,424...219,060,921
Ensembl chr 2:219,054,424...219,060,921 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19789
    cellular process 18958
      cellular component organization or biogenesis 7631
        cellular component organization 7422
          extracellular structure organization 373
            extracellular matrix organization + 372
            intercellular bridge organization + 1
paths to the root