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ONTOLOGY REPORT - ANNOTATIONS

Term:extracellular structure organization
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Accession:GO:0043062 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures in the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane, and also covers the host cell environment outside an intracellular parasite.
Synonyms:exact_synonym: extracellular structure organisation;   extracellular structure organization and biogenesis

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basement membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB1 laminin subunit beta 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:76,829,287...76,914,348
Ensembl chr21:76,829,443...76,914,324 		JBrowse link
G LAMB3 laminin subunit beta 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:19,805,234...19,856,025
Ensembl chr25:19,807,045...19,846,684 		JBrowse link
G NTN4 netrin 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:91,052,142...91,172,463
Ensembl chr11:91,051,662...91,172,522 		JBrowse link
G PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16467571) Ensembl
MGI		 PMID:16467571 GO_REF:0000107 NCBI chr28:11,962,394...11,974,206
Ensembl chr28:11,962,286...11,975,228 		JBrowse link
G PXDN peroxidasin acts_upstream_of
involved_in		 ISO
IEA		 (PMID:32543734) UniProt
Ensembl		 PMID:32543734 GO_REF:0000107 NCBI chr14:105,936,992...106,060,582
Ensembl chr14:105,937,198...106,060,584 		JBrowse link
G RAMP2 receptor activity modifying protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:63,526,915...63,529,697
Ensembl chr16:63,526,305...63,528,767 		JBrowse link
basement membrane disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMA1 chymase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:1,471,767...1,475,062
Ensembl chr24:1,471,725...1,474,692 		JBrowse link
G CTSS cathepsin S involved_in IEA Ensembl GO_REF:0000107
G HPN hepsin involved_in ISO (PMID:16908524) UniProt PMID:16908524 NCBI chr 6:29,973,743...29,998,701
Ensembl chr 6:29,973,867...29,998,855 		JBrowse link
basement membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV1 caveolin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11884617) Ensembl
MGI		 PMID:11884617 GO_REF:0000107 NCBI chr21:85,222,724...85,258,562
Ensembl chr21:85,222,879...85,258,627 		JBrowse link
G CAV2 caveolin 2 acts_upstream_of_or_within ISO (PMID:11884617) MGI PMID:11884617 NCBI chr21:85,197,452...85,206,521
Ensembl chr21:85,197,537...85,206,588 		JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in ISO (PMID:22235340) MGI PMID:22235340 NCBI chr10:74,455,133...74,493,392 JBrowse link
G COL4A1 collagen type IV alpha 1 chain involved_in ISO (PMID:18160688), (PMID:19949034), (PMID:23065703) BHF-UCL PMID:18160688 PMID:19949034 PMID:23065703 NCBI chr 3:88,410,800...88,564,191
Ensembl chr 3:88,412,168...88,564,057 		JBrowse link
G COL6A1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO (PMID:25158062) MGI PMID:25158062 NCBI chr 2:89,608,525...89,649,823 JBrowse link
G DAG1 dystroglycan 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23217742) Ensembl
MGI		 PMID:23217742 GO_REF:0000107 NCBI chr22:10,864,058...10,934,179
Ensembl chr22:10,865,724...10,934,200 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:26024086) MGI PMID:26024086 NCBI chr 8:112,435,733...112,751,301 JBrowse link
G FERMT1 FERM domain containing kindlin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:32,006,824...32,060,838
Ensembl chr 2:32,009,615...32,062,211 		JBrowse link
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28039900) Ensembl
MGI		 PMID:28039900 GO_REF:0000107 NCBI chr 6:40,100,399...40,128,340
Ensembl chr 6:40,126,321...40,127,808 		JBrowse link
G FKTN fukutin acts_upstream_of_or_within ISO (PMID:29360985) MGI PMID:29360985 NCBI chr12:33,872,165...33,964,105
Ensembl chr12:33,900,362...33,953,377 		JBrowse link
G FLRT2 fibronectin leucine rich transmembrane protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:63,169,746...63,174,743
Ensembl chr24:63,170,210...63,172,192 		JBrowse link
G FSHR follicle stimulating hormone receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9811848) Ensembl
MGI		 PMID:9811848 GO_REF:0000107 NCBI chr14:58,013,405...58,211,528
Ensembl chr14:58,013,742...58,212,755 		JBrowse link
G GAS2 growth arrest specific 2 acts_upstream_of_or_within ISO (PMID:27734842) MGI PMID:27734842 NCBI chr 1:42,201,546...42,376,934 JBrowse link
G HMCN1 hemicentin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:43,230,265...43,677,315
Ensembl chr25:43,231,328...43,554,097 		JBrowse link
G ITGB1 integrin subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:32,201,030...32,258,247
Ensembl chr 9:32,202,204...32,258,154 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:12140558), (PMID:21970971) MGI PMID:12140558 PMID:21970971 NCBI chr19:16,080,482...16,704,968
Ensembl chr19:16,080,430...16,549,495 		JBrowse link
G MMP11 matrix metallopeptidase 11 acts_upstream_of_or_within ISO (PMID:18622425) MGI PMID:18622425 NCBI chr19:6,889,343...6,900,563
Ensembl chr19:6,889,385...6,899,788 		JBrowse link
G PMP22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (PMID:16436605) MGI PMID:16436605 NCBI chr16:14,527,892...14,563,223
Ensembl chr16:14,527,672...14,563,171 		JBrowse link
G POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) acts_upstream_of_or_within ISO (PMID:21970971) MGI PMID:21970971 NCBI chr20:86,588,049...86,597,576
Ensembl chr20:86,588,550...86,599,107 		JBrowse link
G POMT2 protein O-mannosyltransferase 2 acts_upstream_of_or_within ISO (PMID:21970971) MGI PMID:21970971 NCBI chr24:54,519,980...54,567,584
Ensembl chr24:54,519,754...54,567,584 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in ISO (PMID:33144400) MGI PMID:33144400 NCBI chr11:38,696,771...38,819,324
Ensembl chr11:38,694,602...38,718,519 		JBrowse link
G PXDN peroxidasin involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:105,936,992...106,060,582
Ensembl chr14:105,937,198...106,060,584 		JBrowse link
G RIC8A RIC8 guanine nucleotide exchange factor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21069829) Ensembl
MGI		 PMID:21069829 GO_REF:0000107 NCBI chr 1:18,597...25,398
Ensembl chr 1:19,013...25,473 		JBrowse link
G SPINT2 serine peptidase inhibitor, Kunitz type 2 acts_upstream_of_or_within ISO (PMID:19592578) MGI PMID:19592578 NCBI chr 6:32,902,336...32,935,681
Ensembl chr 6:32,902,946...32,939,136 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:16186342) MGI PMID:16186342 NCBI chr17:61,750,757...61,769,041 JBrowse link
biofilm matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSG cathepsin G involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:1,518,004...1,521,980
Ensembl chr24:1,518,119...1,520,709 		JBrowse link
collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan acts_upstream_of_or_within ISO (PMID:3070812) MGI PMID:3070812 NCBI chr29:7,345,350...7,416,951 JBrowse link
G ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:32,757,699...33,129,116
Ensembl chr 4:32,757,684...33,129,059 		JBrowse link
G ADAMTS14 ADAM metallopeptidase with thrombospondin type 1 motif 14 acts_upstream_of_or_within ISO (PMID:11741898) MGI PMID:11741898 NCBI chr 9:60,538,718...60,625,903
Ensembl chr 9:60,540,303...60,625,570 		JBrowse link
G ADAMTS19 ADAM metallopeptidase with thrombospondin type 1 motif 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:32,372,312...32,646,070
Ensembl chr23:32,372,515...32,646,071 		JBrowse link
G ADAMTS2 ADAM metallopeptidase with thrombospondin type 1 motif 2 acts_upstream_of_or_within ISO (PMID:16556917) MGI PMID:16556917 NCBI chr23:80,852,588...81,081,593
Ensembl chr23:80,852,331...81,080,218 		JBrowse link
G ADAMTS7 ADAM metallopeptidase with thrombospondin type 1 motif 7 involved_in ISO (PMID:29618652) MGI PMID:29618652
G ANTXR2 ANTXR cell adhesion molecule 2 acts_upstream_of_or_within ISO (PMID:28604699) MGI PMID:28604699 NCBI chr 7:28,345,849...28,499,818
Ensembl chr 7:28,375,899...28,499,522 		JBrowse link
G ANXA2 annexin A2 acts_upstream_of_or_within ISO (PMID:14702107) MGI PMID:14702107 NCBI chr26:23,100,000...23,147,687
Ensembl chr26:23,099,992...23,145,457 		JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:16338116)
(PMID:4808708)
(PMID:20889), (PMID:8895222)
(PMID:8096378)		 MGI PMID:20889 PMID:4808708 PMID:8096378 PMID:8895222 PMID:16338116 NCBI chr  X:66,843,519...66,985,655
Ensembl chr  X:66,843,558...66,985,709 		JBrowse link
G COL11A1 collagen type XI alpha 1 chain acts_upstream_of_or_within ISO (PMID:17029294), (PMID:21467034)
(PMID:17029294), (PMID:17683922), (PMID:21467034), (PMID:3070812), (PMID:4100752), (PMID:4110409), (PMID:7859283)		 MGI PMID:3070812 PMID:4100752 PMID:4110409 PMID:7859283 PMID:17029294 More... NCBI chr20:30,284,471...30,508,660
Ensembl chr20:30,284,447...30,508,658 		JBrowse link
G COL11A2 collagen type XI alpha 2 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10581026), (PMID:11668593) Ensembl
TreeGrafter
MGI		 PMID:10581026 PMID:11668593 GO_REF:0000107 GO_REF:0000118 NCBI chr17:38,882,591...38,912,602
Ensembl chr17:38,882,745...38,911,625 		JBrowse link
G COL14A1 collagen type XIV alpha 1 chain acts_upstream_of_or_within ISO (PMID:22906538) MGI PMID:22906538 NCBI chr 8:114,701,662...114,946,216
Ensembl chr 8:114,701,664...114,887,483 		JBrowse link
G COL1A1 collagen type I alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:43,134,648...43,152,313
Ensembl chr16:43,134,779...43,150,930 		JBrowse link
G COL1A2 collagen type I alpha 2 chain involved_in ISO (PMID:17211858), (PMID:18375391) UniProt PMID:17211858 PMID:18375391 NCBI chr21:54,602,780...54,639,832
Ensembl chr21:54,602,398...54,632,780 		JBrowse link
G COL2A1 collagen type II alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9022054)
(PMID:3070812), (PMID:7276808), (PMID:8989518)
(PMID:11171689), (PMID:7590256), (PMID:9832566), (PMID:9915573)		 Ensembl
TreeGrafter
MGI		 PMID:3070812 PMID:7276808 PMID:7590256 PMID:8989518 PMID:9022054 More... GO_REF:0000107 GO_REF:0000118 NCBI chr11:44,196,213...44,227,718
Ensembl chr11:44,196,094...44,227,468 		JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in
acts_upstream_of_or_within		 ISO (PMID:7546986), (PMID:9036918)
(PMID:9050868)
(PMID:20587693), (PMID:31655293)
(PMID:24820199)
(PMID:29551664)		 UniProt
MGI		 PMID:7546986 PMID:9036918 PMID:9050868 PMID:20587693 PMID:24820199 More... NCBI chr10:74,455,133...74,493,392 JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 Ensembl chr10:74,455,068...74,484,445 JBrowse link
G COL5A1 collagen type V alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15383546), (PMID:16492673), (PMID:17029294)
(PMID:17029294), (PMID:21467034)		 Ensembl
MGI		 PMID:15383546 PMID:16492673 PMID:17029294 PMID:21467034 GO_REF:0000107 NCBI chr12:3,301,643...3,507,300
Ensembl chr12:3,301,175...3,459,607 		JBrowse link
G COL5A2 collagen type V alpha 2 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:74,509,704...74,659,251
Ensembl chr10:74,507,772...74,659,366 		JBrowse link
G COL6A1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO (PMID:28604699)
(PMID:25158062)		 MGI PMID:25158062 PMID:28604699 NCBI chr 2:89,608,525...89,649,823 JBrowse link
G COMP cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26746240)
(PMID:19808781)
(PMID:24312420)		 Ensembl
MGI		 PMID:19808781 PMID:24312420 PMID:26746240 GO_REF:0000107 NCBI chr 6:17,246,617...17,255,561
Ensembl chr 6:17,246,762...17,255,126 		JBrowse link
G CRTAP cartilage associated protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:77,608,493...77,636,242
Ensembl chr15:77,608,760...77,635,960 		JBrowse link
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:69,318,713...69,327,277
Ensembl chr14:69,319,495...69,324,157 		JBrowse link
G DDR2 discoidin domain receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:1,298,636...1,451,872
Ensembl chr20:1,299,574...1,359,674 		JBrowse link
G DPT dermatopontin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12230512), (PMID:16877395) MGI
TreeGrafter		 PMID:12230512 PMID:16877395 GO_REF:0000118 NCBI chr25:60,295,900...60,329,678
Ensembl chr25:60,295,709...60,349,682 		JBrowse link
G ERO1A endoplasmic reticulum oxidoreductase 1 alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:28106121) MGI
Ensembl		 PMID:28106121 GO_REF:0000107 NCBI chr24:29,708,521...29,777,939
Ensembl chr24:29,717,710...29,777,918 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:19850926) MGI PMID:19850926 NCBI chr 8:112,435,733...112,751,301 JBrowse link
G FKBP10 FKBP prolyl isomerase 10 acts_upstream_of_or_within ISO (PMID:24777781)
(PMID:28206698)		 MGI PMID:24777781 PMID:28206698 NCBI chr16:64,438,352...64,448,261
Ensembl chr16:64,438,333...64,448,731 		JBrowse link
G FMOD fibromodulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:25,992,006...26,002,909
Ensembl chr25:25,992,228...26,003,109 		JBrowse link
G FOXC1 forkhead box C1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10767326) Ensembl
MGI		 PMID:10767326 GO_REF:0000107 NCBI chr17:70,533,048...70,536,555
Ensembl chr17:70,534,821...70,536,476 		JBrowse link
G FOXC2 forkhead box C2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10767326) Ensembl
MGI		 PMID:10767326 GO_REF:0000107 NCBI chr 5:71,951,980...71,955,021
Ensembl chr 5:71,952,632...71,954,134 		JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:15539560) BHF-UCL PMID:15539560 NCBI chr26:50,152,097...50,169,760 JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 Ensembl chr26:50,155,496...50,156,047 JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:10660670) MGI PMID:10660670 NCBI chr12:11,443,253...11,526,789
Ensembl chr12:11,444,324...11,526,552 		JBrowse link
G LOX lysyl oxidase involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:26700732) RGD
TreeGrafter
MGI		 PMID:16432278 PMID:16804742 PMID:26700732 GO_REF:0000118 RGD:1600668 RGD:1600669 NCBI chr23:25,158,458...25,172,763
Ensembl chr23:25,157,269...25,172,757 		JBrowse link
G LOXL1 lysyl oxidase like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:9,539,383...9,565,082
Ensembl chr26:9,538,758...9,564,751 		JBrowse link
G LOXL2 lysyl oxidase like 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:21,416,821...21,516,923
Ensembl chr 8:21,416,787...21,516,854 		JBrowse link
G LOXL3 lysyl oxidase like 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:32,722,588...32,745,480
Ensembl chr14:32,725,112...32,745,004 		JBrowse link
G LOXL4 lysyl oxidase like 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:91,405,977...91,426,197
Ensembl chr 9:91,407,095...91,420,938 		JBrowse link
G MIA3 MIA SH3 domain ER export factor 3 acts_upstream_of_or_within ISO (PMID:21606205) MGI PMID:21606205 NCBI chr25:6,901,891...6,954,556
Ensembl chr25:6,902,425...6,954,526 		JBrowse link
G MKX mohawk homeobox acts_upstream_of_or_within ISO (PMID:20696843) MGI PMID:20696843 NCBI chr 9:27,228,061...27,305,852 JBrowse link
G MMP11 matrix metallopeptidase 11 acts_upstream_of_or_within ISO (PMID:18622425) MGI PMID:18622425 NCBI chr19:6,889,343...6,900,563
Ensembl chr19:6,889,385...6,899,788 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:10383727) MGI PMID:10383727 NCBI chr16:24,550,983...24,836,311
Ensembl chr16:24,550,977...24,836,307 		JBrowse link
G OPTC opticin involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr25:25,835,809...25,840,282
Ensembl chr25:25,835,906...25,839,749 		JBrowse link
G P3H1 prolyl 3-hydroxylase 1 acts_upstream_of_or_within ISO (PMID:20363744) MGI PMID:20363744 NCBI chr20:90,166,622...90,185,802
Ensembl chr20:90,166,700...90,186,115 		JBrowse link
G P3H4 prolyl 3-hydroxylase family member 4 (inactive) involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:64,448,360...64,457,865
Ensembl chr16:64,449,057...64,457,868 		JBrowse link
G P4HA1 prolyl 4-hydroxylase subunit alpha 1 acts_upstream_of_or_within ISO (PMID:17135260) MGI PMID:17135260 NCBI chr 9:58,178,350...58,259,303
Ensembl chr 9:58,178,461...58,259,802 		JBrowse link
G PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16467571) Ensembl
MGI		 PMID:16467571 GO_REF:0000107 NCBI chr28:11,962,394...11,974,206
Ensembl chr28:11,962,286...11,975,228 		JBrowse link
G PXDN peroxidasin involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:105,936,992...106,060,582
Ensembl chr14:105,937,198...106,060,584 		JBrowse link
G SCX scleraxis bHLH transcription factor involved_in ISO (MGI:4413438|PMID:18802027)
(PMID:18802027)		 UniProt PMID:18802027 MGI:4413438 NCBI chr 8:138,476,902...138,482,185
Ensembl chr 8:138,478,458...138,480,459 		JBrowse link
G SELENON selenoprotein N acts_upstream_of_or_within ISO (PMID:28106121) MGI PMID:28106121 NCBI chr20:106,953,286...106,971,249 JBrowse link
G SERPINF2 serpin family F member 2 involved_in ISO (MGI:5306295|PMID:17958745)
(PMID:17958745)		 BHF-UCL PMID:17958745 MGI:5306295 NCBI chr16:1,392,562...1,404,574
Ensembl chr16:1,392,571...1,404,636 		JBrowse link
G SERPINH1 serpin family H member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10995453)
(PMID:22492985)		 Ensembl
TreeGrafter
MGI		 PMID:10995453 PMID:22492985 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:66,787,978...66,798,930
Ensembl chr 1:66,788,240...66,799,072 		JBrowse link
G SFRP2 secreted frizzled related protein 2 acts_upstream_of_or_within ISO (PMID:19079247) MGI PMID:19079247 NCBI chr 7:100,336,442...100,345,093
Ensembl chr 7:100,336,119...100,345,086 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:11,163,651...11,259,868
Ensembl chr25:11,163,100...11,258,470 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 acts_upstream_of_or_within ISO (PMID:15993878) MGI PMID:15993878 NCBI chr12:40,272,507...40,321,740
Ensembl chr12:40,276,916...40,297,372 		JBrowse link
G TNXB tenascin XB acts_upstream_of_or_within ISO (PMID:15194424)
(PMID:11925569)		 MGI PMID:11925569 PMID:15194424 NCBI chr17:39,919,839...39,988,087
Ensembl chr17:39,919,772...39,986,868 		JBrowse link
G VIPAS39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27435297) Ensembl
MGI		 PMID:27435297 GO_REF:0000107 NCBI chr24:54,688,278...54,719,054
Ensembl chr24:54,688,230...54,719,042 		JBrowse link
G VPS33B VPS33B late endosome and lysosome associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27435297) Ensembl
MGI		 PMID:27435297 GO_REF:0000107 NCBI chr29:8,838,289...8,862,914
Ensembl chr29:8,838,735...8,862,977 		JBrowse link
G ZNF469 zinc finger protein 469 acts_upstream_of_or_within ISO (PMID:34368841) MGI PMID:34368841 NCBI chr 5:73,762,456...73,820,262 JBrowse link
elastic fiber assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:20889), (PMID:3385878), (PMID:937819)
(PMID:16338116)		 MGI PMID:20889 PMID:937819 PMID:3385878 PMID:16338116 NCBI chr  X:66,843,519...66,985,655
Ensembl chr  X:66,843,558...66,985,709 		JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in ISO (PMID:24820199) MGI PMID:24820199 NCBI chr10:74,455,133...74,493,392 JBrowse link
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19855011) Ensembl
MGI		 PMID:19855011 GO_REF:0000107 NCBI chr 1:8,384,212...8,391,501
Ensembl chr 1:8,385,020...8,390,889 		JBrowse link
G EMILIN1 elastin microfibril interfacer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:80,531,973...80,539,820 JBrowse link
G FBLN5 fibulin 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr24:69,626,498...69,703,146
Ensembl chr24:69,626,339...69,703,108 		JBrowse link
G LOX lysyl oxidase acts_upstream_of_or_within ISO (PMID:23413430)
(PMID:12417550), (PMID:16192629)		 RGD
MGI		 PMID:12417550 PMID:16192629 PMID:16432278 PMID:23413430 RGD:1600669 NCBI chr23:25,158,458...25,172,763
Ensembl chr23:25,157,269...25,172,757 		JBrowse link
G LTBP4 latent transforming growth factor beta binding protein 4 involved_in ISO (MGI:5638486|PMID:25713297) UniProt PMID:25713297 MGI:5638486 NCBI chr 6:35,056,287...35,090,544
Ensembl chr 6:35,061,225...35,090,542 		JBrowse link
G MFAP4 microfibril associated protein 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:17,968,925...17,972,676
Ensembl chr16:17,969,945...17,972,978 		JBrowse link
G MYH11 myosin heavy chain 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:14,723,930...14,879,390
Ensembl chr 5:14,725,504...14,879,198 		JBrowse link
G THSD4 thrombospondin type 1 domain containing 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19940141) Ensembl
MGI		 PMID:19940141 GO_REF:0000107 NCBI chr26:11,677,332...12,207,092
Ensembl chr26:11,683,231...11,912,098 		JBrowse link
G TNXB tenascin XB involved_in ISO (PMID:15102077) UniProt PMID:15102077 NCBI chr17:39,919,839...39,988,087
Ensembl chr17:39,919,772...39,986,868 		JBrowse link
extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL1A2 collagen type I alpha 2 chain acts_upstream_of_or_within ISO (PMID:22910579) MGI PMID:22910579 NCBI chr21:54,602,780...54,639,832
Ensembl chr21:54,602,398...54,632,780 		JBrowse link
G COL6A1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO (PMID:19114551) MGI PMID:19114551 NCBI chr 2:89,608,525...89,649,823 JBrowse link
G ELN elastin involved_in ISO (MGI:5142190|PMID:20576933) BHF-UCL PMID:20576933 MGI:5142190 NCBI chr28:8,999,164...9,048,703 JBrowse link
G FKBP10 FKBP prolyl isomerase 10 acts_upstream_of_or_within ISO (PMID:28774593) MGI PMID:28774593 NCBI chr16:64,438,352...64,448,261
Ensembl chr16:64,438,333...64,448,731 		JBrowse link
G GPM6B glycoprotein M6B involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:12,258,386...12,429,883 JBrowse link
G HAPLN2 hyaluronan and proteoglycan link protein 2 acts_upstream_of_or_within ISO (PMID:20181608) MGI PMID:20181608 NCBI chr20:7,237,940...7,244,840
Ensembl chr20:7,238,281...7,240,183 		JBrowse link
G HAS1 hyaluronan synthase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:44,540,036...44,552,396
Ensembl chr 6:44,540,363...44,547,711 		JBrowse link
G HAS2 hyaluronan synthase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:116,199,516...116,228,705
Ensembl chr 8:116,200,799...116,228,788 		JBrowse link
G HAS3 hyaluronan synthase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:58,289,672...58,306,843
Ensembl chr 5:58,292,044...58,298,524 		JBrowse link
G LOC103214855 growth arrest-specific protein 6 involved_in ISO PMID:18374201 UniProt PMID:18374201 RGD:8554638 NCBI chr 3:91,720,871...91,762,712 JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in ISO (PMID:19706528) MGI PMID:19706528 NCBI chr11:38,696,771...38,819,324
Ensembl chr11:38,694,602...38,718,519 		JBrowse link
G QSOX1 quiescin sulfhydryl oxidase 1 involved_in ISO (PMID:23867277) UniProt PMID:23867277 NCBI chr25:49,180,365...49,223,814
Ensembl chr25:49,181,365...49,223,741 		JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22910579) Ensembl
MGI		 PMID:22910579 GO_REF:0000107 NCBI chr 5:58,965,965...59,057,823
Ensembl chr 5:59,029,093...59,059,577 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:20881014) Ensembl
MGI		 PMID:20881014 GO_REF:0000107 NCBI chr16:49,519,749...49,523,967
Ensembl chr16:49,518,185...49,523,898 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:35,651,583...35,674,387
Ensembl chr 6:35,648,677...35,674,365 		JBrowse link
extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCN2 cellular communication network factor 2 ISO positive regulation RGD PMID:18613219 RGD:2314619 NCBI chr13:41,613,838...41,617,010
Ensembl chr13:41,613,798...41,617,651 		JBrowse link
G CREB3L1 cAMP responsive element binding protein 3 like 1 involved_in ISO (MGI:4438316|PMID:19767743)
(PMID:19767743)		 UniProt PMID:19767743 MGI:4438316 NCBI chr 1:19,009,169...19,054,841
Ensembl chr 1:19,009,035...19,054,804 		JBrowse link
G ENG endoglin ISO RGD PMID:15539634 RGD:1601032 NCBI chr12:10,274,705...10,315,715
Ensembl chr12:10,275,064...10,315,040 		JBrowse link
G TMEM38B transmembrane protein 38B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27188440) Ensembl
MGI		 PMID:27188440 GO_REF:0000107 NCBI chr12:33,759,311...33,840,357
Ensembl chr12:33,759,157...33,840,009 		JBrowse link
G ZNF469 zinc finger protein 469 acts_upstream_of_or_within ISO (PMID:34368841) MGI PMID:34368841 NCBI chr 5:73,762,456...73,820,262 JBrowse link
extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS15 ADAM metallopeptidase with thrombospondin type 1 motif 15 involved_in ISO (MGI:6508502|PMID:23233679)
(PMID:23233679)		 UniProt PMID:23233679 MGI:6508502 NCBI chr 1:121,510,798...121,538,715
Ensembl chr 1:121,510,849...121,535,609 		JBrowse link
G ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif 5 involved_in ISO (MGI:6508502|PMID:23233679)
(PMID:23233679)		 UniProt PMID:23233679 MGI:6508502 NCBI chr 2:65,252,922...65,359,167
Ensembl chr 2:65,254,285...65,299,800 		JBrowse link
G CMA1 chymase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:1,471,767...1,475,062
Ensembl chr24:1,471,725...1,474,692 		JBrowse link
G ENG endoglin involved_in ISO (PMID:18223685) BHF-UCL PMID:18223685 NCBI chr12:10,274,705...10,315,715
Ensembl chr12:10,275,064...10,315,040 		JBrowse link
G EXOC8 exocyst complex component 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:68,594,174...68,599,236
Ensembl chr25:68,596,957...68,599,134 		JBrowse link
G FLOT1 flotillin 1 involved_in ISO (PMID:21119006) UniProt PMID:21119006 NCBI chr17:41,714,354...41,725,820
Ensembl chr17:41,714,402...41,725,397 		JBrowse link
G GSN gelsolin NOT|involved_in ISO (PMID:24236012) UniProt PMID:24236012 NCBI chr12:18,253,079...18,317,285
Ensembl chr12:18,253,324...18,285,938 		JBrowse link
G KIF9 kinesin family member 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:8,626,636...8,685,473
Ensembl chr22:8,632,849...8,680,002 		JBrowse link
G KLK4 kallikrein related peptidase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22243248) Ensembl
MGI		 PMID:22243248 GO_REF:0000107 NCBI chr 6:43,921,920...43,935,224
Ensembl chr 6:43,922,052...43,934,253 		JBrowse link
G KLK5 kallikrein related peptidase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:43,965,110...43,976,135
Ensembl chr 6:43,965,438...43,974,972 		JBrowse link
G LAMC1 laminin subunit gamma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:46,233,409...46,354,060
Ensembl chr25:46,231,780...46,353,557 		JBrowse link
G LCP1 lymphocyte cytosolic protein 1 involved_in ISO (PMID:24236012) UniProt PMID:24236012 NCBI chr 3:24,182,086...24,238,746
Ensembl chr 3:24,182,076...24,238,651 		JBrowse link
G LOC103219957 macrophage-capping protein NOT|involved_in ISO (PMID:24236012) UniProt PMID:24236012 NCBI chr14:21,742,163...21,761,462
Ensembl chr14:21,746,044...21,761,322 		JBrowse link
G MMP13 matrix metallopeptidase 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:94,322,473...94,370,665
Ensembl chr 1:94,322,979...94,334,747 		JBrowse link
G MMP20 matrix metallopeptidase 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22243248) Ensembl
MGI		 PMID:22243248 GO_REF:0000107 NCBI chr 1:93,946,136...93,997,656
Ensembl chr 1:93,947,582...93,996,815 		JBrowse link
G NOXO1 NADPH oxidase organizer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:1,874,801...1,878,557
Ensembl chr 5:1,874,937...1,877,044 		JBrowse link
G PBXIP1 PBX homeobox interacting protein 1 acts_upstream_of_or_within ISO (PMID:30659184) MGI PMID:30659184 NCBI chr20:8,872,492...8,884,029
Ensembl chr20:8,872,409...8,884,450 		JBrowse link
G PLG plasminogen involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:88,266,054...88,321,596
Ensembl chr13:88,268,198...88,322,644 		JBrowse link
G SH3PXD2B SH3 and PX domains 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:74,498,389...74,613,296
Ensembl chr23:74,498,381...74,613,123 		JBrowse link
G WASHC1 WASH complex subunit 1 involved_in ISO (PMID:24344185) UniProt PMID:24344185 NCBI chr11:10,075...27,633
Ensembl chr11:8,116...22,842 		JBrowse link
G WDR72 WD repeat domain 72 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26247047) Ensembl
MGI		 PMID:26247047 GO_REF:0000107 NCBI chr26:29,670,775...29,909,838
Ensembl chr26:29,699,645...29,904,754 		JBrowse link
extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI3BP ABI family member 3 binding protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18757743) MGI
TreeGrafter		 PMID:18757743 GO_REF:0000118 NCBI chr22:79,896,800...80,144,786
Ensembl chr22:79,964,684...80,143,496 		JBrowse link
G ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 2:65,376,288...65,385,398
Ensembl chr 2:65,376,310...65,385,918 		JBrowse link
G ADAMTS10 ADAM metallopeptidase with thrombospondin type 1 motif 10 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 6:7,923,429...7,954,733
Ensembl chr 6:7,924,076...7,949,685 		JBrowse link
G ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif 12 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 4:32,757,699...33,129,116
Ensembl chr 4:32,757,684...33,129,059 		JBrowse link
G ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif 13 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr12:4,677,237...4,718,825
Ensembl chr12:4,677,229...4,714,386 		JBrowse link
G ADAMTS14 ADAM metallopeptidase with thrombospondin type 1 motif 14 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 9:60,538,718...60,625,903
Ensembl chr 9:60,540,303...60,625,570 		JBrowse link
G ADAMTS15 ADAM metallopeptidase with thrombospondin type 1 motif 15 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 1:121,510,798...121,538,715
Ensembl chr 1:121,510,849...121,535,609 		JBrowse link
G ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif 16 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 Ensembl chr 4:4,866,477...4,967,550 JBrowse link
G ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif 17 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr29:18,484,341...18,842,210
Ensembl chr29:18,481,449...18,841,568 		JBrowse link
G ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif 18 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 5:62,764,081...62,921,394
Ensembl chr 5:62,765,939...62,918,697 		JBrowse link
G ADAMTS19 ADAM metallopeptidase with thrombospondin type 1 motif 19 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr23:32,372,312...32,646,070
Ensembl chr23:32,372,515...32,646,071 		JBrowse link
G ADAMTS2 ADAM metallopeptidase with thrombospondin type 1 motif 2 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr23:80,852,588...81,081,593
Ensembl chr23:80,852,331...81,080,218 		JBrowse link
G ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18454205) Ensembl
TreeGrafter
MGI
InterPro		 PMID:18454205 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr11:39,571,228...39,768,386
Ensembl chr11:39,572,013...39,767,590 		JBrowse link
G ADAMTS3 ADAM metallopeptidase with thrombospondin type 1 motif 3 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 7:20,793,392...21,068,712
Ensembl chr 7:20,793,399...21,048,515 		JBrowse link
G ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr20:2,781,184...2,791,464
Ensembl chr20:2,783,855...2,792,170 		JBrowse link
G ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif 5 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 2:65,252,922...65,359,167
Ensembl chr 2:65,254,285...65,299,800 		JBrowse link
G ADAMTS8 ADAM metallopeptidase with thrombospondin type 1 motif 8 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 1:121,465,341...121,491,301
Ensembl chr 1:121,465,883...121,489,200 		JBrowse link
G ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr22:25,545,518...25,720,512
Ensembl chr22:25,545,420...25,719,362 		JBrowse link
G ADAMTSL1 ADAMTS like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:60,805,450...61,221,464
Ensembl chr12:60,805,479...61,056,333 		JBrowse link
G ADAMTSL2 ADAMTS like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25762570) Ensembl
TreeGrafter
MGI
InterPro		 PMID:25762570 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr12:4,562,213...4,602,494
Ensembl chr12:4,562,864...4,602,282 		JBrowse link
G ADAMTSL4 ADAMTS like 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
TreeGrafter
MGI
InterPro		 PMID:18757743 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118
G ADAMTSL5 ADAMTS like 5 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 6:1,278,045...1,287,257
Ensembl chr 6:1,279,036...1,284,946 		JBrowse link
G AGT angiotensinogen acts_upstream_of_or_within ISO (PMID:9734405) MGI PMID:9734405 NCBI chr25:67,964,840...67,977,006
Ensembl chr25:67,962,401...67,973,324 		JBrowse link
G APBB1 amyloid beta precursor protein binding family B member 1 acts_upstream_of_or_within ISO (PMID:16407979) MGI PMID:16407979 NCBI chr 1:58,407,323...58,431,551
Ensembl chr 1:58,421,847...58,431,144 		JBrowse link
G APBB2 amyloid beta precursor protein binding family B member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16407979) Ensembl
MGI		 PMID:16407979 GO_REF:0000107 NCBI chr27:9,130,947...9,530,897
Ensembl chr27:9,311,146...9,534,105 		JBrowse link
G APLP1 amyloid beta precursor like protein 1 acts_upstream_of_or_within ISO (PMID:15385965) MGI PMID:15385965 NCBI chr 6:30,780,112...30,791,582
Ensembl chr 6:30,780,085...30,791,636 		JBrowse link
G APLP2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO (PMID:15385965) MGI PMID:15385965 NCBI chr 1:121,150,296...121,224,511
Ensembl chr 1:121,150,291...121,224,534 		JBrowse link
G APP amyloid beta precursor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15385965) Ensembl
MGI		 PMID:15385965 GO_REF:0000107 NCBI chr 2:66,037,224...66,320,860
Ensembl chr 2:66,037,261...66,321,306 		JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:1115218) MGI PMID:1115218 NCBI chr  X:66,843,519...66,985,655
Ensembl chr  X:66,843,558...66,985,709 		JBrowse link
G ATXN1L ataxin 1 like acts_upstream_of_or_within ISO (PMID:22014525) MGI PMID:22014525 NCBI chr 5:54,987,876...54,996,932
Ensembl chr 5:54,989,527...54,991,596 		JBrowse link
G BCL3 BCL3 transcription coactivator acts_upstream_of_or_within ISO (PMID:10586052) MGI PMID:10586052 NCBI chr 6:38,228,137...38,243,767 JBrowse link
G BCL3 BCL3 transcription coactivator involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 6:38,229,459...38,244,150 JBrowse link
G CCN1 cellular communication network factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr20:47,783,270...47,786,216
Ensembl chr20:47,783,935...47,785,997 		JBrowse link
G COL11A1 collagen type XI alpha 1 chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:30,284,471...30,508,660
Ensembl chr20:30,284,447...30,508,658 		JBrowse link
G COL15A1 collagen type XV alpha 1 chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:40,355,643...40,483,794 JBrowse link
G COL16A1 collagen type XVI alpha 1 chain involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr20:101,166,681...101,189,772 JBrowse link
G COL17A1 collagen type XVII alpha 1 chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:97,079,444...97,136,878
Ensembl chr 9:97,080,191...97,135,545 		JBrowse link
G COL18A1 collagen type XVIII alpha 1 chain acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15254016) MGI
TreeGrafter		 PMID:15254016 GO_REF:0000118 NCBI chr 2:89,129,674...89,186,490 JBrowse link
G COL19A1 collagen type XIX alpha 1 chain acts_upstream_of_or_within ISO (PMID:15302855) MGI PMID:15302855 NCBI chr17:4,769,466...5,096,036 JBrowse link
G COL1A1 collagen type I alpha 1 chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:43,134,648...43,152,313
Ensembl chr16:43,134,779...43,150,930 		JBrowse link
G COL1A2 collagen type I alpha 2 chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:54,602,780...54,639,832
Ensembl chr21:54,602,398...54,632,780 		JBrowse link
G COL24A1 collagen type XXIV alpha 1 chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:47,260,635...47,650,408
Ensembl chr20:47,261,261...47,649,269 		JBrowse link
G COL27A1 collagen type XXVII alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22206015) Ensembl
TreeGrafter
MGI		 PMID:22206015 GO_REF:0000107 GO_REF:0000118 NCBI chr12:25,272,617...25,431,308
Ensembl chr12:25,272,609...25,429,086 		JBrowse link
G COL28A1 collagen type XXVIII alpha 1 chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:50,667,287...50,844,773
Ensembl chr21:50,671,247...50,843,083 		JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in ISO (PMID:31655293)
(PMID:25330296)		 MGI PMID:25330296 PMID:31655293 NCBI chr10:74,455,133...74,493,392 JBrowse link
G COL3A1 collagen type III alpha 1 chain involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr10:74,455,068...74,484,445 JBrowse link
G COL4A1 collagen type IV alpha 1 chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:88,410,800...88,564,191
Ensembl chr 3:88,412,168...88,564,057 		JBrowse link
G COL4A3 collagen type IV alpha 3 chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:113,183,843...113,338,230
Ensembl chr10:113,257,483...113,335,312 		JBrowse link
G COL4A5 collagen type IV alpha 5 chain involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr  X:96,492,556...96,573,108 JBrowse link
G COL4A6 collagen type IV alpha 6 chain acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10965041) MGI
TreeGrafter		 PMID:10965041 GO_REF:0000118 NCBI chr  X:96,012,442...96,307,911 JBrowse link
G COL5A1 collagen type V alpha 1 chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:3,301,643...3,507,300
Ensembl chr12:3,301,175...3,459,607 		JBrowse link
G COL5A2 collagen type V alpha 2 chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:74,509,704...74,659,251
Ensembl chr10:74,507,772...74,659,366 		JBrowse link
G COL5A3 collagen type V alpha 3 chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:9,033,298...9,092,061
Ensembl chr 6:9,033,287...9,091,826 		JBrowse link
G COL7A1 collagen type VII alpha 1 chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:9,964,652...9,996,785
Ensembl chr22:9,964,651...9,996,626 		JBrowse link
G COL8A2 collagen type VIII alpha 2 chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:96,728,341...96,761,495
Ensembl chr20:96,756,520...96,759,182 		JBrowse link
G COL9A1 collagen type IX alpha 1 chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:4,570,766...4,761,678
Ensembl chr17:4,674,162...4,761,924 		JBrowse link
G COL9A2 collagen type IX alpha 2 chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:92,582,167...92,599,151
Ensembl chr20:92,582,736...92,599,423 		JBrowse link
G COL9A3 collagen type IX alpha 3 chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:1,385,108...1,411,960 JBrowse link
G CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 5:70,225,791...70,314,763
Ensembl chr 5:70,225,883...70,314,974 		JBrowse link
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21148564) Ensembl
MGI		 PMID:21148564 GO_REF:0000107 NCBI chr 8:17,494,312...17,851,497
Ensembl chr 8:17,494,187...17,695,037 		JBrowse link
G CUNH6orf15 chromosome unknown C6orf15 homolog acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18757743) MGI
TreeGrafter		 PMID:18757743 GO_REF:0000118 NCBI chr17:41,361,046...41,364,223
Ensembl chr17:41,361,677...41,362,812 		JBrowse link
G DMP1 dentin matrix acidic phosphoprotein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) InterPro
TreeGrafter
MGI
Ensembl		 PMID:18757743 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:36,032,320...36,046,621
Ensembl chr 7:36,039,432...36,046,278 		JBrowse link
G DNAJB6 DnaJ heat shock protein family (Hsp40) member B6 acts_upstream_of_or_within ISO (PMID:21972064) MGI PMID:21972064 NCBI chr21:125,455,782...125,544,495
Ensembl chr21:125,469,957...125,544,820 		JBrowse link
G ECM2 extracellular matrix protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
TreeGrafter
MGI		 PMID:18757743 GO_REF:0000107 GO_REF:0000118 NCBI chr12:103,010,232...103,053,472
Ensembl chr12:103,011,749...103,053,678 		JBrowse link
G EGFL6 EGF like domain multiple 6 acts_upstream_of_or_within ISO (PMID:18757743) MGI PMID:18757743 NCBI chr  X:12,051,172...12,116,860
Ensembl chr  X:12,052,518...12,116,845 		JBrowse link
G EGFLAM EGF like, fibronectin type III and laminin G domains involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 4:37,096,097...37,297,978
Ensembl chr 4:37,098,302...37,297,968 		JBrowse link
G ELF3 E74 like ETS transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11984530) Ensembl
MGI		 PMID:11984530 GO_REF:0000107 NCBI chr25:27,390,707...27,398,312
Ensembl chr25:27,390,809...27,397,441 		JBrowse link
G ELN elastin acts_upstream_of_or_within ISO (PMID:18757743) MGI PMID:18757743 NCBI chr28:8,999,164...9,048,703 JBrowse link
G EMILIN1 elastin microfibril interfacer 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr14:80,531,973...80,539,820 JBrowse link
G ERCC2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9651581) Ensembl
MGI		 PMID:9651581 GO_REF:0000107 NCBI chr 6:38,804,296...38,823,229
Ensembl chr 6:38,801,423...38,823,073 		JBrowse link
G ERO1A endoplasmic reticulum oxidoreductase 1 alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22981861) Ensembl
MGI		 PMID:22981861 GO_REF:0000107 NCBI chr24:29,708,521...29,777,939
Ensembl chr24:29,717,710...29,777,918 		JBrowse link
G ERO1B endoplasmic reticulum oxidoreductase 1 beta acts_upstream_of_or_within ISO (PMID:22981861) MGI PMID:22981861 NCBI chr25:73,378,209...73,445,280
Ensembl chr25:73,381,153...73,445,251 		JBrowse link
G FBLN1 fibulin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) InterPro
MGI		 PMID:18757743 GO_REF:0000002 NCBI chr19:27,962,669...28,061,356
Ensembl chr19:27,962,642...28,061,364 		JBrowse link
G FBLN5 fibulin 5 acts_upstream_of_or_within ISO (PMID:18757743) MGI PMID:18757743 NCBI chr24:69,626,498...69,703,146
Ensembl chr24:69,626,339...69,703,108 		JBrowse link
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31296900) Ensembl
MGI		 PMID:31296900 GO_REF:0000107 NCBI chr 6:40,100,399...40,128,340
Ensembl chr 6:40,126,321...40,127,808 		JBrowse link
G FN1 fibronectin 1 ISO RGD PMID:12388756 RGD:1358623 NCBI chr10:101,177,867...101,254,613
Ensembl chr10:101,176,789...101,254,633 		JBrowse link
G FOXF1 forkhead box F1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16439479) Ensembl
MGI		 PMID:16439479 GO_REF:0000107 NCBI chr 5:71,898,473...71,902,624
Ensembl chr 5:71,898,786...71,903,661 		JBrowse link
G FOXF2 forkhead box F2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16439479) Ensembl
MGI		 PMID:16439479 GO_REF:0000107 NCBI chr17:70,744,989...70,750,860
Ensembl chr17:70,745,011...70,750,652 		JBrowse link
G GFAP glial fibrillary acidic protein acts_upstream_of_or_within ISO (PMID:11487638) MGI PMID:11487638 NCBI chr16:61,489,090...61,499,672
Ensembl chr16:61,489,421...61,500,646 		JBrowse link
G GFOD2 Gfo/Idh/MocA-like oxidoreductase domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
TreeGrafter
MGI		 PMID:18757743 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:59,715,257...59,769,806
Ensembl chr 5:59,715,287...59,770,089 		JBrowse link
G HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 1:21,530,292...21,702,552
Ensembl chr 1:21,528,391...21,702,455 		JBrowse link
G HSPG2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO (PMID:10579729) MGI PMID:10579729 NCBI chr20:110,693,858...110,809,467
Ensembl chr20:110,693,854...110,809,466 		JBrowse link
G IBSP integrin binding sialoprotein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18757743) MGI
TreeGrafter		 PMID:18757743 GO_REF:0000118 NCBI chr 7:36,170,411...36,185,099
Ensembl chr 7:36,174,903...36,184,278 		JBrowse link
G IDUA alpha-L-iduronidase acts_upstream_of_or_within ISO (PMID:25410057) MGI PMID:25410057 NCBI chr27:47,778,220...47,794,435
Ensembl chr27:47,778,335...47,794,352 		JBrowse link
G IMPG1 interphotoreceptor matrix proteoglycan 1 acts_upstream_of_or_within ISO (PMID:32265257) MGI PMID:32265257 NCBI chr13:624,694...783,466
Ensembl chr13:625,891...750,525 		JBrowse link
G IMPG2 interphotoreceptor matrix proteoglycan 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32265257) Ensembl
MGI		 PMID:32265257 GO_REF:0000107 NCBI chr22:79,560,987...79,664,906
Ensembl chr22:79,561,498...79,660,472 		JBrowse link
G ITGA8 integrin subunit alpha 8 acts_upstream_of_or_within ISO (PMID:10742111) MGI PMID:10742111 NCBI chr 9:15,482,746...15,684,161
Ensembl chr 9:15,482,750...15,683,481 		JBrowse link
G ITIH1 inter-alpha-trypsin inhibitor heavy chain 1 acts_upstream_of_or_within ISO (PMID:17675295) MGI PMID:17675295 NCBI chr22:14,159,702...14,174,627
Ensembl chr22:14,160,680...14,174,641 		JBrowse link
G KAZALD1 Kazal type serine peptidase inhibitor domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 9:94,077,273...94,081,736
Ensembl chr 9:94,077,419...94,084,487 		JBrowse link
G LGALS3 galectin 3 acts_upstream_of_or_within ISO (PMID:15800063) MGI PMID:15800063 NCBI chr24:32,311,343...32,328,335
Ensembl chr24:32,311,271...32,328,339 		JBrowse link
G LOC103216367 inactive heparanase-2 acts_upstream_of_or_within ISO (PMID:25510506) MGI PMID:25510506 NCBI chr 9:91,616,277...92,346,206 JBrowse link
G LOC103219294 beta-1,4-galactosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11900463) Ensembl
MGI		 PMID:11900463 GO_REF:0000107 NCBI chr12:47,104,750...47,162,157
Ensembl chr12:47,104,789...47,162,173 		JBrowse link
G LOC103228317 coiled-coil domain-containing protein 80 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18757743) MGI
TreeGrafter		 PMID:18757743 GO_REF:0000118 NCBI chr22:68,168,159...68,182,818 JBrowse link
G LOC103241700 collagen alpha-4(VI) chain-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:59,894,622...59,995,003 JBrowse link
G MANSC4 MANSC domain containing 4 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr11:27,483,063...27,488,507 JBrowse link
G MATN3 matrilin 3 involved_in ISO (MGI:1353153|PMID:10660556) ComplexPortal PMID:10660556 MGI:1353153 NCBI chr14:87,707,293...87,729,793
Ensembl chr14:87,707,380...87,728,800 		JBrowse link
G MIA MIA SH3 domain containing acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11839810) MGI
TreeGrafter		 PMID:11839810 GO_REF:0000118 NCBI chr 6:35,227,681...35,230,718
Ensembl chr 6:35,228,411...35,230,704 		JBrowse link
G MMP1 matrix metallopeptidase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:94,167,507...94,177,357
Ensembl chr 1:94,167,219...94,176,767 		JBrowse link
G MMP10 matrix metallopeptidase 10 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:94,147,995...94,158,315
Ensembl chr 1:94,148,087...94,158,097 		JBrowse link
G MMP11 matrix metallopeptidase 11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18622425) MGI
TreeGrafter		 PMID:18622425 GO_REF:0000118 NCBI chr19:6,889,343...6,900,563
Ensembl chr19:6,889,385...6,899,788 		JBrowse link
G MMP12 matrix metallopeptidase 12 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:94,243,061...94,261,035
Ensembl chr 1:94,243,875...94,259,591 		JBrowse link
G MMP13 matrix metallopeptidase 13 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:94,322,473...94,370,665
Ensembl chr 1:94,322,979...94,334,747 		JBrowse link
G MMP14 matrix metallopeptidase 14 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr29:23,201,425...23,212,408
Ensembl chr29:23,201,112...23,212,679 		JBrowse link
G MMP15 matrix metallopeptidase 15 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:43,961,288...43,982,182
Ensembl chr 5:43,960,891...43,982,261 		JBrowse link
G MMP16 matrix metallopeptidase 16 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:83,122,904...83,407,910
Ensembl chr 8:83,132,315...83,407,933 		JBrowse link
G MMP17 matrix metallopeptidase 17 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:127,204,811...127,229,202
Ensembl chr11:127,214,890...127,230,731 		JBrowse link
G MMP19 matrix metallopeptidase 19 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:51,786,076...51,794,325 JBrowse link
G MMP2 matrix metallopeptidase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:41,264,382...41,291,657
Ensembl chr 5:41,264,354...41,291,004 		JBrowse link
G MMP20 matrix metallopeptidase 20 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:93,946,136...93,997,656
Ensembl chr 1:93,947,582...93,996,815 		JBrowse link
G MMP21 matrix metallopeptidase 21 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:118,387,926...118,400,048
Ensembl chr 9:118,389,666...118,398,807 		JBrowse link
G MMP23B matrix metallopeptidase 23B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:129,873,838...129,876,521
Ensembl chr20:129,873,867...129,876,524 		JBrowse link
G MMP24 matrix metallopeptidase 24 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:56,153,277...56,183,026
Ensembl chr 2:56,152,944...56,184,605 		JBrowse link
G MMP25 matrix metallopeptidase 25 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:2,792,249...2,806,357
Ensembl chr 5:2,792,389...2,804,728 		JBrowse link
G MMP26 matrix metallopeptidase 26 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:61,826,835...61,832,152
Ensembl chr 1:61,827,321...61,831,374 		JBrowse link
G MMP27 matrix metallopeptidase 27 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:94,075,524...94,091,080
Ensembl chr 1:94,075,605...94,090,215 		JBrowse link
G MMP28 matrix metallopeptidase 28 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:29,241,938...29,272,231
Ensembl chr16:29,240,569...29,272,077 		JBrowse link
G MMP3 matrix metallopeptidase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:94,216,156...94,224,437
Ensembl chr 1:94,216,173...94,224,264 		JBrowse link
G MMP7 matrix metallopeptidase 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:93,889,189...93,901,077
Ensembl chr 1:93,889,198...93,899,587 		JBrowse link
G MMP8 matrix metallopeptidase 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:94,097,620...94,110,114
Ensembl chr 1:94,097,896...94,109,432 		JBrowse link
G MMP9 matrix metallopeptidase 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15800063) Ensembl
TreeGrafter
MGI		 PMID:15800063 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:17,867,267...17,874,757
Ensembl chr 2:17,867,177...17,874,712 		JBrowse link
G MPZL3 myelin protein zero like 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15482472) Ensembl
MGI		 PMID:15482472 GO_REF:0000107 NCBI chr 1:109,609,152...109,631,914
Ensembl chr 1:109,604,671...109,631,990 		JBrowse link
G MYF5 myogenic factor 5 acts_upstream_of_or_within ISO (PMID:16554364) MGI PMID:16554364 NCBI chr11:76,189,122...76,193,830
Ensembl chr11:76,191,579...76,193,549 		JBrowse link
G NDNF neuron derived neurotrophic factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
TreeGrafter
MGI		 PMID:18757743 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:68,320,045...68,356,644
Ensembl chr 7:68,320,690...68,356,577 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:16835260) MGI PMID:16835260 NCBI chr16:24,550,983...24,836,311
Ensembl chr16:24,550,977...24,836,307 		JBrowse link
G NFKB2 nuclear factor kappa B subunit 2 acts_upstream_of_or_within ISO (PMID:10586052) MGI PMID:10586052 NCBI chr 9:95,426,193...95,434,560
Ensembl chr 9:95,427,785...95,434,570 		JBrowse link
G NID1 nidogen 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr25:73,130,966...73,227,385
Ensembl chr25:73,130,448...73,227,349 		JBrowse link
G NOX1 NADPH oxidase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16386251) Ensembl
MGI		 PMID:16386251 GO_REF:0000107 NCBI chr  X:89,182,636...89,210,176
Ensembl chr  X:89,183,264...89,209,298 		JBrowse link
G NPHP3 nephrocystin 3 acts_upstream_of_or_within ISO (PMID:7539536) MGI PMID:7539536 NCBI chr15:57,550,878...57,629,106
Ensembl chr15:57,551,189...57,592,661 		JBrowse link
G NPNT nephronectin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 7:53,924,655...54,001,320
Ensembl chr 7:53,924,701...54,001,852 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16424942) Ensembl
MGI		 PMID:16424942 GO_REF:0000107 NCBI chr13:65,663,495...65,686,510
Ensembl chr13:65,664,826...65,685,807 		JBrowse link
G OLFML2A olfactomedin like 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr12:13,334,339...13,368,610
Ensembl chr12:13,335,805...13,451,675 		JBrowse link
G OLFML2B olfactomedin like 2B acts_upstream_of_or_within ISO (PMID:18757743) MGI PMID:18757743 NCBI chr20:2,053,696...2,094,142
Ensembl chr20:2,053,852...2,094,126 		JBrowse link
G PAPLN papilin, proteoglycan like sulfated glycoprotein involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr24:50,479,932...50,528,284
Ensembl chr24:50,493,117...50,526,322 		JBrowse link
G PDGFRA platelet derived growth factor receptor alpha acts_upstream_of_or_within ISO (PMID:15543606) MGI PMID:15543606 NCBI chr 7:14,243,291...14,307,373
Ensembl chr 7:14,241,070...14,307,422 		JBrowse link
G POMT1 protein O-mannosyltransferase 1 acts_upstream_of_or_within ISO (PMID:15383666) MGI PMID:15383666 NCBI chr12:6,620,179...6,639,051
Ensembl chr12:6,618,312...6,639,024 		JBrowse link
G POSTN periostin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16314533) MGI
TreeGrafter		 PMID:16314533 GO_REF:0000118 NCBI chr 3:16,060,013...16,095,867
Ensembl chr 3:16,059,965...16,095,791 		JBrowse link
G PRDX4 peroxiredoxin 4 acts_upstream_of_or_within ISO (PMID:22981861) MGI PMID:22981861 NCBI chr  X:22,113,405...22,136,307
Ensembl chr  X:22,116,605...22,136,308 		JBrowse link
G PTK2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (PMID:14642275) MGI PMID:14642275 NCBI chr 8:134,897,511...135,246,300 JBrowse link
G PTX3 pentraxin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17675295) Ensembl
MGI		 PMID:17675295 GO_REF:0000107 NCBI chr15:33,320,592...33,327,236
Ensembl chr15:33,321,208...33,327,268 		JBrowse link
G PXDN peroxidasin involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:105,936,992...106,060,582
Ensembl chr14:105,937,198...106,060,584 		JBrowse link
G RECK reversion inducing cysteine rich protein with kazal motifs acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11747814) MGI
TreeGrafter		 PMID:11747814 GO_REF:0000118 NCBI chr12:44,431,807...44,517,893
Ensembl chr12:44,431,615...44,517,810 		JBrowse link
G RXFP1 relaxin family peptide receptor 1 acts_upstream_of_or_within ISO (PMID:15256493) MGI PMID:15256493 NCBI chr 7:105,078,422...105,203,929
Ensembl chr 7:105,122,424...105,202,589 		JBrowse link
G SERAC1 serine active site containing 1 acts_upstream_of_or_within ISO (PMID:18757743) MGI PMID:18757743 NCBI chr13:85,711,101...85,770,010
Ensembl chr13:85,710,061...85,769,961 		JBrowse link
G SERPINB5 serpin family B member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18593913) Ensembl
MGI		 PMID:18593913 GO_REF:0000107 NCBI chr18:16,256,700...16,284,410
Ensembl chr18:16,256,552...16,283,764 		JBrowse link
G SLC39A8 solute carrier family 39 member 8 acts_upstream_of
involved_in		 ISO
IEA		 (MGI:6117959|PMID:29337306)
(PMID:29337306)		 UniProt
Ensembl		 PMID:29337306 GO_REF:0000107 MGI:6117959 NCBI chr 7:50,355,756...50,451,253
Ensembl chr 7:50,367,436...50,451,510 		JBrowse link
G SMARCA4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 acts_upstream_of_or_within ISO (PMID:18267097) MGI PMID:18267097 NCBI chr 6:9,943,162...10,044,476 JBrowse link
G SMOC1 SPARC related modular calcium binding 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18757743) MGI
TreeGrafter		 PMID:18757743 GO_REF:0000118 NCBI chr24:47,119,210...47,272,629
Ensembl chr24:47,119,553...47,273,453 		JBrowse link
G SMOC2 SPARC related modular calcium binding 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18757743) MGI
TreeGrafter		 PMID:18757743 GO_REF:0000118 NCBI chr13:96,264,170...96,477,393
Ensembl chr13:96,264,181...96,477,491 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17350610)
(PMID:24191021)		 Ensembl
MGI		 PMID:17350610 PMID:24191021 GO_REF:0000107 NCBI chr16:49,519,749...49,523,967
Ensembl chr16:49,518,185...49,523,898 		JBrowse link
G SPINT1 serine peptidase inhibitor, Kunitz type 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17174946) MGI
TreeGrafter		 PMID:17174946 GO_REF:0000118 NCBI chr26:42,136,749...42,150,125
Ensembl chr26:42,134,536...42,150,118 		JBrowse link
G SPOCK2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr 9:59,213,198...59,242,752
Ensembl chr 9:59,213,553...59,243,703 		JBrowse link
G TGFB2 transforming growth factor beta 2 acts_upstream_of_or_within ISO (PMID:11784073), (PMID:15528466) MGI PMID:11784073 PMID:15528466 NCBI chr25:11,163,651...11,259,868
Ensembl chr25:11,163,100...11,258,470 		JBrowse link
G TGFBI transforming growth factor beta induced acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18757743) MGI
TreeGrafter		 PMID:18757743 GO_REF:0000118 NCBI chr23:38,774,387...38,808,624
Ensembl chr23:38,774,473...38,808,649 		JBrowse link
G THSD4 thrombospondin type 1 domain containing 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:11,677,332...12,207,092
Ensembl chr26:11,683,231...11,912,098 		JBrowse link
G TNF tumor necrosis factor acts_upstream_of_or_within ISO (PMID:15381731) MGI PMID:15381731
G TNFRSF11B TNF receptor superfamily member 11b acts_upstream_of_or_within ISO (PMID:18757743) MGI PMID:18757743 NCBI chr 8:113,520,711...113,549,370
Ensembl chr 8:113,520,596...113,548,936 		JBrowse link
G TNR tenascin R involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10341229), (PMID:11077416), (PMID:16870730) Ensembl
MGI		 PMID:10341229 PMID:11077416 PMID:16870730 GO_REF:0000107 NCBI chr25:53,526,477...53,942,278 JBrowse link
G TNXB tenascin XB acts_upstream_of_or_within ISO (PMID:15242785) MGI PMID:15242785 NCBI chr17:39,919,839...39,988,087
Ensembl chr17:39,919,772...39,986,868 		JBrowse link
G VHL von Hippel-Lindau tumor suppressor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16537898) Ensembl
MGI		 PMID:16537898 GO_REF:0000107 NCBI chr22:46,184,621...46,203,065
Ensembl chr22:46,184,756...46,204,428 		JBrowse link
G VIT vitrin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
TreeGrafter
MGI		 PMID:18757743 GO_REF:0000107 GO_REF:0000118 NCBI chr14:70,593,305...70,725,537
Ensembl chr14:70,593,739...70,688,664 		JBrowse link
G VTN vitronectin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18757743) Ensembl
MGI		 PMID:18757743 GO_REF:0000107 NCBI chr16:22,133,903...22,138,077
Ensembl chr16:22,133,138...22,136,815 		JBrowse link
G VWA1 von Willebrand factor A domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19279005)
(PMID:18757743)		 Ensembl
MGI		 PMID:18757743 PMID:19279005 GO_REF:0000107 NCBI chr20:130,016,802...130,023,138
Ensembl chr20:130,014,754...130,021,822 		JBrowse link
G WDR72 WD repeat domain 72 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:35181734) MGI
Ensembl		 PMID:35181734 GO_REF:0000107 NCBI chr26:29,670,775...29,909,838
Ensembl chr26:29,699,645...29,904,754 		JBrowse link
G WNT3A Wnt family member 3A acts_upstream_of_or_within ISO (PMID:17943183) MGI PMID:17943183 NCBI chr25:1,664,316...1,675,006
Ensembl chr25:1,666,053...1,719,881 		JBrowse link
gene expression involved in extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (PMID:23900597) MGI PMID:23900597 NCBI chr 7:35,993,669...35,999,443 JBrowse link
G PBXIP1 PBX homeobox interacting protein 1 acts_upstream_of_or_within ISO (PMID:30659184) MGI PMID:30659184 NCBI chr20:8,872,492...8,884,029
Ensembl chr20:8,872,409...8,884,450 		JBrowse link
G ZNF469 zinc finger protein 469 acts_upstream_of_or_within ISO (PMID:34368841) MGI PMID:34368841 NCBI chr 5:73,762,456...73,820,262 JBrowse link
glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL4A2 collagen type IV alpha 2 chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:88,564,328...88,760,191
Ensembl chr 3:88,563,903...88,760,411 		JBrowse link
G COL4A3 collagen type IV alpha 3 chain involved_in ISO (MGI:3610934|PMID:12631063) UniProt PMID:12631063 MGI:3610934 NCBI chr10:113,183,843...113,338,230
Ensembl chr10:113,257,483...113,335,312 		JBrowse link
G COL4A4 collagen type IV alpha 4 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10534397) Ensembl
TreeGrafter
MGI		 PMID:10534397 GO_REF:0000107 GO_REF:0000118 NCBI chr10:113,028,552...113,183,240
Ensembl chr10:113,028,552...113,165,958 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:18480751) MGI PMID:18480751 NCBI chr 8:112,435,733...112,751,301 JBrowse link
G MPV17 mitochondrial inner membrane protein MPV17 involved_in ISO (MGI:3776221|PMID:16041630) UniProt PMID:16041630 MGI:3776221 NCBI chr14:80,289,285...80,302,838 JBrowse link
G MYO1E myosin IE involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:24,138,462...24,378,602
Ensembl chr26:24,138,829...24,379,143 		JBrowse link
G NID1 nidogen 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14566019) Ensembl
MGI		 PMID:14566019 GO_REF:0000107 NCBI chr25:73,130,966...73,227,385
Ensembl chr25:73,130,448...73,227,349 		JBrowse link
G NPHS1 NPHS1 adhesion molecule, nephrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:30,736,869...30,763,054
Ensembl chr 6:30,736,966...30,762,929 		JBrowse link
G SULF1 sulfatase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:65,242,921...65,435,374
Ensembl chr 8:65,341,154...65,435,450 		JBrowse link
G SULF2 sulfatase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:16,140,307...16,270,787
Ensembl chr 2:16,140,427...16,268,750 		JBrowse link
G WT1 WT1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:32,750,300...32,801,832 JBrowse link
intercellular bridge organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TEX14 testis expressed 14, intercellular bridge forming factor involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr16:34,709,039...34,849,855
Ensembl chr16:34,746,004...34,849,781 		JBrowse link
metanephric glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMB2 laminin subunit beta 2 acts_upstream_of_or_within ISO (PMID:16886065), (PMID:7670489) MGI PMID:7670489 PMID:16886065 NCBI chr22:10,523,763...10,535,733
Ensembl chr22:10,523,717...10,536,207 		JBrowse link
negative regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHADL chondroadherin like involved_in ISO (PMID:25451920) UniProt PMID:25451920 NCBI chr19:23,772,516...23,785,210
Ensembl chr19:23,778,433...23,783,250 		JBrowse link
G EMILIN1 elastin microfibril interfacer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:80,531,973...80,539,820 JBrowse link
negative regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANTXR1 ANTXR cell adhesion molecule 1 acts_upstream_of_or_within ISO (PMID:25572963) MGI PMID:25572963 NCBI chr14:37,849,911...38,116,339
Ensembl chr14:37,877,436...38,115,938 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISO (PMID:25704091) BHF-UCL PMID:25704091 NCBI chr22:48,262,743...48,407,415
Ensembl chr22:48,275,600...48,407,418 		JBrowse link
G TGFBR3 transforming growth factor beta receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:41,353,182...41,565,357
Ensembl chr20:41,353,325...41,565,343 		JBrowse link
negative regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADTRP androgen dependent TFPI regulating protein involved_in ISO (PMID:28341552) BHF-UCL PMID:28341552 NCBI chr17:60,371,412...60,436,988
Ensembl chr17:60,368,546...60,438,864 		JBrowse link
G NOTCH1 notch receptor 1 involved_in ISO (MGI:6158728|PMID:26491108)
(PMID:26491108)		 BHF-UCL PMID:26491108 MGI:6158728 NCBI chr12:1,656,815...1,707,566
Ensembl chr12:1,656,918...1,709,585 		JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A involved_in ISO (MGI:6158728|PMID:26491108) BHF-UCL PMID:26491108 MGI:6158728 NCBI chr11:6,364,544...6,378,880
Ensembl chr11:6,364,330...6,378,902 		JBrowse link
G TNFRSF1B TNF receptor superfamily member 1B involved_in ISO (MGI:6158728|PMID:26491108)
(PMID:26491108)		 BHF-UCL PMID:26491108 MGI:6158728 NCBI chr20:119,590,621...119,633,562
Ensembl chr20:119,590,325...119,633,497 		JBrowse link
negative regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CST3 cystatin C involved_in ISO (PMID:10545518) BHF-UCL PMID:10545518 NCBI chr 2:52,834,497...52,838,785
Ensembl chr 2:52,832,181...52,838,865 		JBrowse link
G DPP4 dipeptidyl peptidase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:47,396,605...47,481,478
Ensembl chr10:47,394,093...47,480,893 		JBrowse link
G FAP fibroblast activation protein alpha involved_in ISO (PMID:16651416) UniProt PMID:16651416 NCBI chr10:47,578,164...47,652,179
Ensembl chr10:47,577,888...47,652,689 		JBrowse link
negative regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAP fibroblast activation protein alpha involved_in ISO (PMID:10455171) UniProt PMID:10455171 NCBI chr10:47,578,164...47,652,179
Ensembl chr10:47,577,888...47,652,689 		JBrowse link
polarized secretion of basement membrane proteins in epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRICKLE1 prickle planar cell polarity protein 1 involved_in ISO (PMID:33144400) MGI PMID:33144400 NCBI chr11:38,696,771...38,819,324
Ensembl chr11:38,694,602...38,718,519 		JBrowse link
positive regulation of basement membrane assembly involved in embryonic body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLASP1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr10:8,639,245...8,946,935
Ensembl chr10:8,639,196...8,946,968 		JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr15:77,969,587...78,186,843
Ensembl chr15:77,968,860...78,186,601 		JBrowse link
G DAG1 dystroglycan 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:10,864,058...10,934,179
Ensembl chr22:10,865,724...10,934,200 		JBrowse link
G PHLDB1 pleckstrin homology like domain family B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,001,516...110,053,166
Ensembl chr 1:110,002,591...110,052,831 		JBrowse link
G PHLDB2 pleckstrin homology like domain family B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:68,821,958...69,059,087
Ensembl chr22:68,821,742...69,059,087 		JBrowse link
positive regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COLGALT1 collagen beta(1-O)galactosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:16,040,532...16,066,298
Ensembl chr 6:16,040,583...16,066,565 		JBrowse link
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO (MGI:5660411|PMID:26178373), (MGI:5695689|PMID:26220971), (MGI:6158865|PMID:26711913)
(PMID:26178373), (PMID:26220971), (PMID:26711913)		 UniProt PMID:26178373 PMID:26220971 PMID:26711913 MGI:5660411 MGI:5695689 MGI:6158865 NCBI chr 1:8,384,212...8,391,501
Ensembl chr 1:8,385,020...8,390,889 		JBrowse link
G RB1 RB transcriptional corepressor 1 involved_in ISO (MGI:6112863|PMID:29304157)
(PMID:29304157)		 BHF-UCL PMID:29304157 MGI:6112863 NCBI chr 3:26,220,783...26,393,671
Ensembl chr 3:26,220,803...26,394,546 		JBrowse link
G TNXB tenascin XB involved_in ISO (PMID:17033827) ComplexPortal PMID:17033827 NCBI chr17:39,919,839...39,988,087
Ensembl chr17:39,919,772...39,986,868 		JBrowse link
positive regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen acts_upstream_of ISO (PMID:30729664) BHF-UCL PMID:30729664 NCBI chr25:67,964,840...67,977,006
Ensembl chr25:67,962,401...67,973,324 		JBrowse link
G EMILIN1 elastin microfibril interfacer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:80,531,973...80,539,820 JBrowse link
G MAD2L2 mitotic arrest deficient 2 like 2 ISO RGD PMID:27488450 RGD:152995505 NCBI chr20:120,099,928...120,115,954
Ensembl chr20:120,110,269...120,116,083 		JBrowse link
G RGCC regulator of cell cycle involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:19,681,700...19,695,655
Ensembl chr 3:19,681,874...19,693,644 		JBrowse link
G SMAD3 SMAD family member 3 acts_upstream_of
involved_in		 ISO (PMID:30729664)
(PMID:21307346)		 BHF-UCL PMID:21307346 PMID:30729664 NCBI chr26:16,319,959...16,446,472
Ensembl chr26:16,320,933...16,446,527 		JBrowse link
G SMAD4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:29,894,157...29,951,445
Ensembl chr18:29,897,621...29,934,478 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20881014) Ensembl
MGI		 PMID:20881014 GO_REF:0000107 NCBI chr16:49,519,749...49,523,967
Ensembl chr16:49,518,185...49,523,898 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in
acts_upstream_of		 IEA
ISO		 (MGI:5775885|PMID:24279830) Ensembl
BHF-UCL		 PMID:24279830 GO_REF:0000107 MGI:5775885 NCBI chr 6:35,651,583...35,674,387
Ensembl chr 6:35,648,677...35,674,365 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 acts_upstream_of ISO (PMID:28251559) BHF-UCL PMID:28251559 NCBI chr12:40,272,507...40,321,740
Ensembl chr12:40,276,916...40,297,372 		JBrowse link
positive regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:21419085 RGD:5129171 NCBI chr25:67,964,840...67,977,006
Ensembl chr25:67,962,401...67,973,324 		JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:31,349,394...31,361,227
Ensembl chr 2:31,348,808...31,360,901 		JBrowse link
G CPB2 carboxypeptidase B2 ISO RGD PMID:23369837 RGD:7243115 NCBI chr 3:24,108,854...24,161,669
Ensembl chr 3:24,109,416...24,161,408 		JBrowse link
G IER3IP1 immediate early response 3 interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:33,767,897...33,789,114
Ensembl chr18:33,767,957...33,790,095 		JBrowse link
G RGCC regulator of cell cycle involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:19,681,700...19,695,655
Ensembl chr 3:19,681,874...19,693,644 		JBrowse link
positive regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARMIL2 capping protein regulator and myosin 1 linker 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:59,787,069...59,801,615
Ensembl chr 5:59,787,120...59,801,122 		JBrowse link
G CLASP1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:24859005) UniProt PMID:24859005 NCBI chr10:8,639,245...8,946,935
Ensembl chr10:8,639,196...8,946,968 		JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:24859005) UniProt PMID:24859005 NCBI chr15:77,969,587...78,186,843
Ensembl chr15:77,968,860...78,186,601 		JBrowse link
G DDR2 discoidin domain receptor tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:1,298,636...1,451,872
Ensembl chr20:1,299,574...1,359,674 		JBrowse link
G FSCN1 fascin actin-bundling protein 1 involved_in ISO (PMID:20137952) UniProt PMID:20137952 NCBI chr28:16,127,033...16,142,285
Ensembl chr28:16,127,015...16,142,337 		JBrowse link
G IL6 interleukin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:35,577,513...35,582,385
Ensembl chr21:35,577,939...35,582,237 		JBrowse link
G MELTF melanotransferrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:90,225,699...90,254,893
Ensembl chr15:90,225,780...90,255,263 		JBrowse link
G PDPN podoplanin involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:118,644,060...118,679,508
Ensembl chr20:118,644,051...118,679,311 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in ISO (MGI:5688835|PMID:21984612)
(PMID:21984612)		 UniProt PMID:21984612 MGI:5688835 NCBI chr25:11,163,651...11,259,868
Ensembl chr25:11,163,100...11,258,470 		JBrowse link
positive regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO RGD PMID:19846571 RGD:8693597 NCBI chr12:7,258,932...7,435,658
Ensembl chr12:7,256,648...7,312,734 		JBrowse link
G CFLAR CASP8 and FADD like apoptosis regulator ISO RGD PMID:24691542 RGD:11341715 NCBI chr10:86,768,252...86,819,963
Ensembl chr10:86,782,240...86,816,652 		JBrowse link
G CYP2J2 cytochrome P450 family 2 subfamily J member 2 ISO RGD PMID:29656108 RGD:150520032 NCBI chr20:73,083,312...73,115,174
Ensembl chr20:73,083,389...73,115,077 		JBrowse link
G RB1 RB transcriptional corepressor 1 involved_in ISO (MGI:6112863|PMID:29304157) BHF-UCL PMID:29304157 MGI:6112863 NCBI chr 3:26,220,783...26,393,671
Ensembl chr 3:26,220,803...26,394,546 		JBrowse link
regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AEBP1 AE binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:14,553,441...14,563,599
Ensembl chr21:14,553,744...14,563,399 		JBrowse link
G COL6A1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO (PMID:20951202) MGI PMID:20951202 NCBI chr 2:89,608,525...89,649,823 JBrowse link
G EFEMP2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO (MGI:5776647|PMID:26690653) UniProt PMID:26690653 MGI:5776647 NCBI chr 1:8,384,212...8,391,501
Ensembl chr 1:8,385,020...8,390,889 		JBrowse link
regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen involved_in ISO (PMID:17416596) BHF-UCL PMID:17416596 NCBI chr25:67,964,840...67,977,006
Ensembl chr25:67,962,401...67,973,324 		JBrowse link
G HAS2 hyaluronan synthase 2 ISO RGD PMID:27094859 RGD:12910548 NCBI chr 8:116,199,516...116,228,705
Ensembl chr 8:116,200,799...116,228,788 		JBrowse link
G NOTCH1 notch receptor 1 involved_in ISO (MGI:5298073|PMID:21311046) BHF-UCL PMID:21311046 MGI:5298073 NCBI chr12:1,656,815...1,707,566
Ensembl chr12:1,656,918...1,709,585 		JBrowse link
G TIE1 tyrosine kinase with immunoglobulin like and EGF like domains 1 acts_upstream_of
involved_in		 ISO
IEA		 (MGI:6370101|PMID:31319059)
(PMID:31319059)		 BHF-UCL
Ensembl		 PMID:31319059 GO_REF:0000107 MGI:6370101 NCBI chr20:89,483,089...89,505,716
Ensembl chr20:89,483,039...89,505,246 		JBrowse link
regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RIC1 RIC1 homolog, RAB6A GEF complex partner 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:73,738,646...73,887,518
Ensembl chr12:73,740,954...73,886,295 		JBrowse link
regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDR1 discoidin domain receptor tyrosine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:41,564,271...41,583,404
Ensembl chr17:41,564,992...41,575,682 		JBrowse link
G ETS1 ETS proto-oncogene 1, transcription factor ISO RGD PMID:16738537 RGD:2313717 NCBI chr 1:119,588,476...119,736,623
Ensembl chr 1:119,588,448...119,652,299 		JBrowse link
G FGFR4 fibroblast growth factor receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:79,095,031...79,106,018
Ensembl chr23:79,097,429...79,105,456 		JBrowse link
regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chr12:7,258,932...7,435,658
Ensembl chr12:7,256,648...7,312,734 		JBrowse link
G ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:20980600) MGI PMID:20980600 NCBI chr25:50,106,621...50,244,002
Ensembl chr25:50,216,483...50,241,621 		JBrowse link
G ANGPTL7 angiopoietin like 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:120,589,968...120,598,751
Ensembl chr20:120,589,812...120,597,017 		JBrowse link
G AXIN2 axin 2 involved_in ISO (MGI:6108194|PMID:28069701)
(PMID:28069701)		 BHF-UCL PMID:28069701 MGI:6108194 NCBI chr16:55,874,043...55,906,739
Ensembl chr16:55,874,072...55,907,281 		JBrowse link
G ITGB3 integrin subunit beta 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22984613) Ensembl
MGI		 PMID:22984613 GO_REF:0000107 NCBI chr16:59,372,171...59,431,434
Ensembl chr16:59,374,889...59,410,857 		JBrowse link
G LEMD3 LEM domain containing 3 acts_upstream_of_or_within ISO (PMID:16943282) MGI PMID:16943282 NCBI chr11:60,861,671...60,945,858
Ensembl chr11:60,862,265...60,946,040 		JBrowse link
G PRDM5 PR/SET domain 5 involved_in ISO (PMID:21664999) ARUK-UCL PMID:21664999 NCBI chr 7:67,985,387...68,207,113
Ensembl chr 7:67,987,359...68,206,893 		JBrowse link
G RECK reversion inducing cysteine rich protein with kazal motifs involved_in ISO (PMID:18591254) BHF-UCL PMID:18591254 NCBI chr12:44,431,807...44,517,893
Ensembl chr12:44,431,615...44,517,810 		JBrowse link
G SLC2A10 solute carrier family 2 member 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:26376865) ARUK-UCL
Ensembl		 PMID:26376865 GO_REF:0000107 NCBI chr 2:17,160,692...17,185,875 JBrowse link
G TCF15 transcription factor 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24038871) Ensembl
MGI		 PMID:24038871 GO_REF:0000107 NCBI chr 2:55,909,945...55,916,186
Ensembl chr 2:55,910,030...55,915,600 		JBrowse link
G TGFB2 transforming growth factor beta 2 acts_upstream_of_or_within ISO (PMID:21780244) MGI PMID:21780244 NCBI chr25:11,163,651...11,259,868
Ensembl chr25:11,163,100...11,258,470 		JBrowse link
G ZNF469 zinc finger protein 469 involved_in ISO (PMID:21664999) ARUK-UCL PMID:21664999 NCBI chr 5:73,762,456...73,820,262 JBrowse link
vitelline membrane formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17881493) Ensembl
MGI		 PMID:17881493 GO_REF:0000107 NCBI chr10:104,960,296...104,966,596
Ensembl chr10:104,960,120...104,966,585 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17106
    cellular process 16633
      cellular component organization or biogenesis 6835
        cellular component organization 6610
          extracellular structure organization 321
            extracellular matrix organization + 320
            intercellular bridge organization + 1
paths to the root