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ONTOLOGY REPORT - ANNOTATIONS


Term:DNA methylation involved in gamete generation
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Accession:GO:0043046 term browser browse the term
Definition:The covalent transfer of a methyl group to C-5 of cytosine that contributes to the establishment of DNA methylation patterns in the gamete.
Synonyms:related_synonym: de novo DNA methylation



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DNA methylation involved in gamete generation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asz1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 involved_in ISO (MGI:4356194|PMID:19730684) RGD PMID:19730684 MGI:4356194 NCBI chr 4:46,400,485...46,456,085
Ensembl chr 4:46,400,485...46,456,085
JBrowse link
G Ctcfl CCCTC-binding factor like involved_in ISO (MGI:3692841|PMID:17048991) RGD PMID:17048991 MGI:3692841 NCBI chr 3:161,868,306...161,890,949
Ensembl chr 3:161,868,306...161,890,949
JBrowse link
G Ddx4 DEAD-box helicase 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:4443217|PMID:20439430)
UniProt
RGD
PMID:20439430 GO_REF:0000024 MGI:4443217 NCBI chr 2:44,227,946...44,282,867
Ensembl chr 2:44,227,946...44,282,723
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha involved_in ISO (MGI:3045942|PMID:15215868) RGD PMID:15215868 MGI:3045942 NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687
JBrowse link
G Dnmt3l DNA methyltransferase 3 like involved_in ISS
ISO
GO_REF:0000024
(MGI:3054275|PMID:15318244)
UniProt
RGD
PMID:15318244 GO_REF:0000024 MGI:3054275 NCBI chr20:10,614,933...10,629,516
Ensembl chr20:10,614,934...10,629,516
JBrowse link
G Fkbp6 FKBP prolyl isomerase family member 6 involved_in ISS
ISO
GO_REF:0000024
(MGI:5439219|PMID:22902560)
UniProt
RGD
PMID:22902560 GO_REF:0000024 MGI:5439219 NCBI chr12:21,318,251...21,390,350
Ensembl chr12:21,319,568...21,390,350
JBrowse link
G Kdm1b lysine demethylase 1B acts_upstream_of_or_within ISO MGI:4359289 (MGI:4358629|PMID:19727073) RGD PMID:19727073 MGI:4358629 NCBI chr17:17,602,961...17,643,865
Ensembl chr17:17,602,961...17,643,800
JBrowse link
G Mael maelstrom spermatogenic transposon silencer involved_in ISO (MGI:4417983|PMID:20011505) RGD PMID:20011505 MGI:4417983 NCBI chr13:78,457,073...78,496,657
Ensembl chr13:78,457,073...78,496,657
JBrowse link
G Morc1 MORC family CW-type zinc finger 1 acts_upstream_of_or_within ISO MGI:1857787 (MGI:5694015|PMID:25503965) RGD PMID:25503965 MGI:5694015 NCBI chr11:52,178,769...52,384,255
Ensembl chr11:52,178,769...52,384,255
JBrowse link
G Mov10l1 Mov10 like RISC complex RNA helicase 1 involved_in ISO (MGI:4457283|PMID:20534472) RGD PMID:20534472 MGI:4457283 NCBI chr 7:120,070,171...120,135,406
Ensembl chr 7:120,070,135...120,134,765
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 involved_in ISO (MGI:3778312|PMID:18381894), (MGI:3815367|PMID:18922463) RGD PMID:18381894 PMID:18922463 MGI:3778312 MGI:3815367 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702
JBrowse link
G Piwil4 piwi-like RNA-mediated gene silencing 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:3778312|PMID:18381894), (MGI:3815367|PMID:18922463)
UniProt
RGD
PMID:18381894 PMID:18922463 GO_REF:0000024 MGI:3778312 MGI:3815367 NCBI chr 8:11,536,520...11,579,883
Ensembl chr 8:11,536,520...11,579,761
JBrowse link
G Pld6 phospholipase D family, member 6 involved_in ISO (MGI:4943610|PMID:21397847) RGD PMID:21397847 MGI:4943610 NCBI chr10:44,577,740...44,581,686
Ensembl chr10:44,577,675...44,581,077
JBrowse link
G Prmt7 protein arginine methyltransferase 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:3692841|PMID:17048991)
UniProt
RGD
PMID:17048991 GO_REF:0000024 MGI:3692841 NCBI chr19:34,110,724...34,161,531
Ensembl chr19:34,110,747...34,162,577
JBrowse link
G Tdrd1 tudor domain containing 1 involved_in ISO (MGI:4356231|PMID:19465913) RGD PMID:19465913 MGI:4356231 NCBI chr 1:255,871,939...255,919,222
Ensembl chr 1:255,875,887...255,915,871
JBrowse link
G Tdrd12 tudor domain containing 12 involved_in ISO (MGI:5516419|PMID:24067652) RGD PMID:24067652 MGI:5516419 NCBI chr 1:88,133,271...88,205,729
Ensembl chr 1:88,133,373...88,205,705
JBrowse link
G Tdrd5 tudor domain containing 5 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:4946318|PMID:21383078)
UniProt
Ensembl
RGD
PMID:21383078 GO_REF:0000024 GO_REF:0000107 MGI:4946318 NCBI chr13:68,394,180...68,447,745
Ensembl chr13:68,394,061...68,441,319
JBrowse link
G Tdrd9 tudor domain containing 9 involved_in ISS
ISO
GO_REF:0000024
(MGI:4418580|PMID:20059948)
UniProt
RGD
PMID:20059948 GO_REF:0000024 MGI:4418580 NCBI chr 6:131,029,644...131,145,076
Ensembl chr 6:131,029,652...131,144,651
JBrowse link
G Tdrkh tudor and KH domain containing involved_in ISO (MGI:5494327|PMID:23714778) RGD PMID:23714778 MGI:5494327 NCBI chr 2:182,049,175...182,071,516
Ensembl chr 2:182,049,215...182,070,755
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20094
    reproductive process 1767
      cellular process involved in reproduction in multicellular organism 517
        DNA methylation involved in gamete generation 19
Path 2
Term Annotations click to browse term
  biological_process 20094
    metabolic process 12347
      cellular metabolic process 10465
        cellular nitrogen compound metabolic process 7078
          nucleobase-containing compound metabolic process 5784
            nucleic acid metabolic process 5190
              DNA metabolic process 1036
                DNA modification 115
                  DNA methylation or demethylation 102
                    DNA methylation 85
                      DNA methylation involved in gamete generation 19
paths to the root