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ONTOLOGY REPORT - ANNOTATIONS

Term:peptide biosynthetic process
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Accession:GO:0043043 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide.
Synonyms:exact_synonym: peptide anabolism;   peptide biosynthesis;   peptide formation;   peptide synthesis

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peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmd dystrophin involved_in ISO (PMID:16000376) UniProt PMID:16000376 NCBI chrNW_004936553:7,157,526...7,943,703 JBrowse link
G Furin furin, paired basic amino acid cleaving enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:16,136,099...16,147,945
Ensembl chrNW_004936483:16,136,099...16,144,635 		JBrowse link
G Pcsk1 proprotein convertase subtilisin/kexin type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936523:7,009,966...7,050,300
Ensembl chrNW_004936523:7,010,068...7,050,468 		JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:11,466,955...11,896,887
Ensembl chrNW_004936503:11,466,950...11,896,887 		JBrowse link
amino acid activation for nonribosomal peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aasdh aminoadipate-semialdehyde dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24467666) Ensembl
TreeGrafter
MGI		 PMID:24467666 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936482:18,558,789...18,591,709
Ensembl chrNW_004936482:18,558,943...18,590,297 		JBrowse link
antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgals4 galectin 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27427436) Ensembl
MGI		 PMID:27427436 GO_REF:0000107 NCBI chrNW_004936661:1,772,394...1,780,590
Ensembl chrNW_004936661:1,772,075...1,779,626 		JBrowse link
G Mmp7 matrix metallopeptidase 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20056603) Ensembl
MGI		 PMID:20056603 GO_REF:0000107 NCBI chrNW_004936551:5,388,456...5,395,071
Ensembl chrNW_004936551:5,388,459...5,395,071 		JBrowse link
biosynthetic process of antibacterial peptides active against Gram-negative bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101961846 neutrophil elastase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:345,678...347,420
Ensembl chrNW_004936588:345,678...347,413 		JBrowse link
biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15692051) Ensembl
MGI		 PMID:15692051 GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
bradykinin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12485443) Ensembl
MGI		 PMID:12485443 GO_REF:0000107 NCBI chrNW_004936471:8,209,091...8,226,249
Ensembl chrNW_004936471:8,209,057...8,226,353 		JBrowse link
glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gclc glutamate-cysteine ligase catalytic subunit involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:10805773)
(PMID:16081425)		 RGD
TreeGrafter
MGI
UniProt
InterPro
Ensembl		 PMID:10805773 PMID:16081425 PMID:16183645 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 RGD:1582661 NCBI chrNW_004936476:7,371,270...7,418,756
Ensembl chrNW_004936476:7,371,149...7,418,958 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936619:762,278...791,610 JBrowse link
G Ggt5 gamma-glutamyltransferase 5 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936619:794,876...837,748
Ensembl chrNW_004936619:794,889...837,736 		JBrowse link
G Ggt6 gamma-glutamyltransferase 6 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936677:1,111,203...1,115,131
Ensembl chrNW_004936677:1,111,280...1,114,811 		JBrowse link
G Ggt7 gamma-glutamyltransferase 7 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936561:5,846,229...5,870,815
Ensembl chrNW_004936561:5,845,943...5,872,183 		JBrowse link
G Gss glutathione synthetase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:81780|PMID:8660701) RGD
GOC
InterPro
UniProt		 PMID:8660701 PMID:10964706 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 MGI:81780 RGD:1599340 NCBI chrNW_004936561:5,765,637...5,793,951
Ensembl chrNW_004936561:5,765,610...5,793,567 		JBrowse link
G Hagh hydroxyacylglutathione hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:2,181,475...2,200,469
Ensembl chrNW_004936694:2,181,501...2,194,007 		JBrowse link
G LOC101964258 glutamate--cysteine ligase regulatory subunit-like involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936855:288,266...313,067 JBrowse link
G LOC101977655 glutamate--cysteine ligase regulatory subunit involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:16081425) RGD
TreeGrafter
MGI
UniProt
InterPro		 PMID:16081425 PMID:16183645 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:1582661 NCBI chrNW_004936537:5,356,914...5,378,998 JBrowse link
G Mgst2 microsomal glutathione S-transferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:7,995,185...8,015,463
Ensembl chrNW_004936535:7,995,248...8,015,463 		JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:613,250...690,555
Ensembl chrNW_004936503:613,223...690,721 		JBrowse link
G Slc1a2 solute carrier family 1 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936533:2,779,650...2,918,640
Ensembl chrNW_004936533:2,779,518...2,918,298 		JBrowse link
positive regulation of antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18167348) Ensembl
MGI		 PMID:18167348 GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15692051) Ensembl
MGI		 PMID:15692051 GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982 		JBrowse link
positive regulation of glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO (MGI:5616326|PMID:14978030)
(PMID:14978030)		 ParkinsonsUK-UCL PMID:14978030 MGI:5616326 NCBI chrNW_004936712:413,602...454,443
Ensembl chrNW_004936712:414,446...454,449 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:6,589,967...6,621,171
Ensembl chrNW_004936509:6,590,630...6,620,262 		JBrowse link
regulation of glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a11 solute carrier family 7 member 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16037214) Ensembl
MGI		 PMID:16037214 GO_REF:0000107 NCBI chrNW_004936535:9,177,305...9,242,743
Ensembl chrNW_004936535:9,177,143...9,242,566 		JBrowse link
siderophore biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdh2 3-hydroxybutyrate dehydrogenase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936520:278,467...304,525
Ensembl chrNW_004936520:278,435...304,770 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16138
    cellular process 15774
      metabolic process 10261
        biosynthetic process 6903
          peptide biosynthetic process 26
            antimicrobial peptide biosynthetic process + 4
            bradykinin biosynthetic process 1
            nonribosomal peptide biosynthetic process + 17
            peptide antibiotic biosynthetic process + 0
paths to the root