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ONTOLOGY REPORT - ANNOTATIONS

Term:peptide biosynthetic process
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Accession:GO:0043043 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide.
Synonyms:exact_synonym: peptide anabolism;   peptide biosynthesis;   peptide formation;   peptide synthesis

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peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmd dystrophin involved_in ISO (PMID:16000376) UniProt PMID:16000376 NCBI chrNW_004624762:22,306,962...24,846,427
Ensembl chrNW_004624762:22,746,729...24,847,938 		JBrowse link
G Furin furin, paired basic amino acid cleaving enzyme involved_in ISO (PMID:8262946) BHF-UCL PMID:8262946 NCBI chrNW_004624768:17,372,754...17,387,732
Ensembl chrNW_004624768:17,371,628...17,387,881 		JBrowse link
G Pcsk1 proprotein convertase subtilisin/kexin type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624743:14,993,436...15,036,512
Ensembl chrNW_004624743:14,994,172...15,036,412 		JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in ISO (PMID:18519639), (PMID:8468318)
(MGI:3795695|PMID:18519639), (MGI:74959|PMID:8468318)
(PMID:8901832)		 BHF-UCL PMID:8468318 PMID:8901832 PMID:18519639 MGI:3795695 MGI:74959 NCBI chrNW_004624811:3,453,218...3,862,970 JBrowse link
amino acid activation for nonribosomal peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aasdh aminoadipate-semialdehyde dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24467666) TreeGrafter
MGI
Ensembl		 PMID:24467666 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624761:13,026,875...13,063,511
Ensembl chrNW_004624761:13,026,213...13,064,708 		JBrowse link
antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgals4 galectin 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27427436) MGI
Ensembl		 PMID:27427436 GO_REF:0000107 NCBI chrNW_004624794:12,187,862...12,195,697
Ensembl chrNW_004624794:12,187,383...12,195,019 		JBrowse link
G Mmp7 matrix metallopeptidase 7 acts_upstream_of_or_within ISO (PMID:20056603) MGI PMID:20056603 NCBI chrNW_004624878:345,038...364,986
Ensembl chrNW_004624878:345,038...361,652 		JBrowse link
biosynthetic process of antibacterial peptides active against Gram-negative bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101705441 neutrophil elastase-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004625158:12,527...15,343 JBrowse link
G LOC101715199 neutrophil elastase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624828:7,720,020...7,722,842 JBrowse link
biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of ISO (PMID:15692051) MGI PMID:15692051 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
bradykinin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO (PMID:12485443) MGI PMID:12485443 NCBI chrNW_004624731:13,775,414...13,789,380
Ensembl chrNW_004624731:13,777,656...13,785,366 		JBrowse link
glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gclc glutamate-cysteine ligase catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10805773)
(PMID:16081425)		 TreeGrafter
RGD
UniProt
InterPro
Ensembl
MGI		 PMID:10805773 PMID:16081425 PMID:16183645 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 RGD:1582661 NCBI chrNW_004624850:749,046...793,654
Ensembl chrNW_004624850:749,050...793,959 		JBrowse link
G Gclm glutamate-cysteine ligase modifier subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16081425) TreeGrafter
MGI
UniProt
InterPro
Ensembl
RGD		 PMID:16081425 PMID:16183645 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:1582661 NCBI chrNW_004624742:3,713,275...3,746,219
Ensembl chrNW_004624742:3,713,250...3,743,290 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624747:10,030,034...10,048,554 JBrowse link
G Ggt5 gamma-glutamyltransferase 5 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624747:10,050,765...10,072,255
Ensembl chrNW_004624747:10,051,553...10,071,983 		JBrowse link
G Ggt6 gamma-glutamyltransferase 6 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624786:7,120,434...7,123,826
Ensembl chrNW_004624786:7,120,156...7,123,847 		JBrowse link
G Ggt7 gamma-glutamyltransferase 7 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624842:4,526,618...4,551,644
Ensembl chrNW_004624842:4,526,536...4,554,253 		JBrowse link
G Gss glutathione synthetase involved_in
acts_upstream_of_or_within		 ISO
IEA		 (MGI:81780|PMID:8660701) RGD
InterPro
UniProt
GOC		 PMID:8660701 PMID:10964706 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 MGI:81780 RGD:1599340 NCBI chrNW_004624842:4,445,015...4,470,124
Ensembl chrNW_004624842:4,446,721...4,478,450 		JBrowse link
G Hagh hydroxyacylglutathione hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624913:426,554...446,061
Ensembl chrNW_004624913:434,537...446,061 		JBrowse link
G Mgst2 microsomal glutathione S-transferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624777:19,902,013...19,924,272
Ensembl chrNW_004624777:19,901,862...19,927,011 		JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624736:9,246,348...9,325,671
Ensembl chrNW_004624736:9,246,262...9,325,485 		JBrowse link
G Slc1a2 solute carrier family 1 member 2 involved_in ISO (PMID:12614333) MGI PMID:12614333 NCBI chrNW_004624767:11,768,942...11,919,315
Ensembl chrNW_004624767:11,768,951...11,911,017 		JBrowse link
positive regulation of antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:18167348) MGI PMID:18167348 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:15692051) MGI PMID:15692051 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
positive regulation of glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO (MGI:5616326|PMID:14978030)
(PMID:14978030)		 ParkinsonsUK-UCL PMID:14978030 MGI:5616326 NCBI chrNW_004624749:15,867,444...15,950,757
Ensembl chrNW_004624749:15,869,569...15,950,757 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO (MGI:5616326|PMID:14978030)
(PMID:14978030)		 ParkinsonsUK-UCL PMID:14978030 MGI:5616326 NCBI chrNW_004624787:14,355,330...14,381,353
Ensembl chrNW_004624787:14,355,791...14,381,251 		JBrowse link
regulation of glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO (PMID:16037214) MGI PMID:16037214 NCBI chrNW_004624777:18,540,006...18,619,881
Ensembl chrNW_004624777:18,546,799...18,619,947 		JBrowse link
siderophore biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdh2 3-hydroxybutyrate dehydrogenase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624830:4,991,689...5,006,911
Ensembl chrNW_004624830:4,991,714...5,006,783 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15258
    cellular process 14889
      metabolic process 9701
        biosynthetic process 6535
          peptide biosynthetic process 26
            antimicrobial peptide biosynthetic process + 5
            bradykinin biosynthetic process 1
            nonribosomal peptide biosynthetic process + 16
            peptide antibiotic biosynthetic process + 0
paths to the root