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ONTOLOGY REPORT - ANNOTATIONS

Term:peptide biosynthetic process
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Accession:GO:0043043 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide.
Synonyms:exact_synonym: peptide anabolism;   peptide biosynthesis;   peptide formation;   peptide synthesis


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peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DMD dystrophin involved_in IDA (PMID:16000376) UniProt PMID:16000376 NCBI chr  X:31,119,222...33,339,388
Ensembl chr  X:31,097,677...33,339,609 		JBrowse link
G FURIN furin, paired basic amino acid cleaving enzyme involved_in IDA (PMID:8262946) BHF-UCL PMID:8262946 NCBI chr15:90,868,588...90,883,457
Ensembl chr15:90,868,588...90,883,564 		JBrowse link
G PCSK1 proprotein convertase subtilisin/kexin type 1 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:96,390,333...96,433,248
Ensembl chr 5:96,390,333...96,434,143 		JBrowse link
G PCSK5 proprotein convertase subtilisin/kexin type 5 involved_in IDA
IEA		 (PMID:8901832) BHF-UCL
Ensembl		 PMID:8901832 GO_REF:0000107 NCBI chr 9:75,889,809...76,362,975
Ensembl chr 9:75,890,644...76,362,975 		JBrowse link
amino acid activation for nonribosomal peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASDH aminoadipate-semialdehyde dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24467666) Ensembl
MGI		 PMID:24467666 GO_REF:0000107 NCBI chr 4:56,338,290...56,387,491
Ensembl chr 4:56,338,287...56,387,508 		JBrowse link
antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LGALS4 galectin 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27427436) Ensembl
MGI		 PMID:27427436 GO_REF:0000107 NCBI chr19:38,801,674...38,812,945
Ensembl chr19:38,801,671...38,812,945 		JBrowse link
G MMP7 matrix metallopeptidase 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20056603) Ensembl
MGI		 PMID:20056603 GO_REF:0000107 NCBI chr11:102,520,508...102,530,747
Ensembl chr11:102,520,508...102,530,750 		JBrowse link
biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15692051) Ensembl
MGI		 PMID:15692051 GO_REF:0000107 NCBI chr16:50,693,606...50,733,075
Ensembl chr16:50,693,588...50,733,077 		JBrowse link
bradykinin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12485443) Ensembl
MGI		 PMID:12485443 GO_REF:0000107 NCBI chr15:45,587,123...45,609,716
Ensembl chr15:45,587,214...45,615,945 		JBrowse link
glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 involved_in TAS Reactome Reactome:R-HSA-174403 NCBI chr15:40,953,471...40,956,512
Ensembl chr15:40,952,962...40,956,512 		JBrowse link
G CHAC2 ChaC glutathione specific gamma-glutamylcyclotransferase 2 involved_in TAS Reactome Reactome:R-HSA-174403 NCBI chr 2:53,767,783...53,775,196
Ensembl chr 2:53,767,804...53,775,196 		JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA
IMP
IDA		 (PMID:10805773)
(PMID:16081425)
(PMID:12663448)
(PMID:10395918), (PMID:8104187), (PMID:9675072)		 RGD
MGI
GO_Central
UniProt
InterPro
Ensembl		 PMID:8104187 PMID:9675072 PMID:10395918 PMID:10805773 PMID:12663448 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 RGD:1582661 NCBI chr 6:53,497,341...53,545,101
Ensembl chr 6:53,497,341...53,616,970 		JBrowse link
G GCLM glutamate-cysteine ligase modifier subunit acts_upstream_of_or_within
involved_in		 ISO
IBA
IDA
IEA
IMP		 (PMID:16081425)
(PMID:10395918), (PMID:9675072)
(PMID:12081989)		 RGD
MGI
GO_Central
UniProt
Ensembl
InterPro		 PMID:9675072 PMID:10395918 PMID:12081989 PMID:16081425 PMID:16183645 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 RGD:1582661 NCBI chr 1:93,885,199...93,909,430
Ensembl chr 1:93,885,199...93,909,456 		JBrowse link
G GGT1 gamma-glutamyltransferase 1 involved_in IEA
ISS		 UniProt GO_REF:0000024 GO_REF:0000043 NCBI chr22:24,583,750...24,628,996
Ensembl chr22:24,594,811...24,629,005 		JBrowse link
G GGT3P gamma-glutamyltransferase 3 pseudogene involved_in IEA UniProt GO_REF:0000043 NCBI chr22:18,773,689...18,791,961
Ensembl chr22:18,773,825...18,791,223 		JBrowse link
G GGT5 gamma-glutamyltransferase 5 involved_in IEA UniProt GO_REF:0000043 NCBI chr22:24,219,654...24,245,142
Ensembl chr22:24,219,654...24,245,108 		JBrowse link
G GGT6 gamma-glutamyltransferase 6 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:4,556,140...4,560,577
Ensembl chr17:4,556,927...4,560,818 		JBrowse link
G GGT7 gamma-glutamyltransferase 7 involved_in IEA UniProt GO_REF:0000043 NCBI chr20:34,844,720...34,872,856
Ensembl chr20:34,844,720...34,872,856 		JBrowse link
G GSS glutathione synthetase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:81780|PMID:8660701) RGD
GOC
GOC
UniProt
InterPro		 PMID:8660701 PMID:10964706 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000108 MGI:81780 RGD:1599340 NCBI chr20:34,928,432...34,956,027
Ensembl chr20:34,928,432...34,956,027 		JBrowse link
G HAGH hydroxyacylglutathione hydrolase involved_in IDA (PMID:8550579) UniProt PMID:8550579 NCBI chr16:1,807,629...1,827,194
Ensembl chr16:1,795,620...1,827,157 		JBrowse link
G MGST2 microsomal glutathione S-transferase 2 involved_in IDA (PMID:8703034) UniProt PMID:8703034 NCBI chr 4:139,665,819...139,754,618
Ensembl chr 4:139,665,768...139,740,745 		JBrowse link
G SLC1A1 solute carrier family 1 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,490,468...4,587,469
Ensembl chr 9:4,490,468...4,587,469 		JBrowse link
G SLC1A2 solute carrier family 1 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:35,251,205...35,420,507
Ensembl chr11:35,251,205...35,420,063 		JBrowse link
positive regulation of antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18167348) Ensembl
MGI		 PMID:18167348 GO_REF:0000107 NCBI chr16:50,693,606...50,733,075
Ensembl chr16:50,693,588...50,733,077 		JBrowse link
positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15692051) Ensembl
MGI		 PMID:15692051 GO_REF:0000107 NCBI chr16:50,693,606...50,733,075
Ensembl chr16:50,693,588...50,733,077 		JBrowse link
positive regulation of glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF2AK3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO (MGI:5616326|PMID:14978030)
(PMID:14978030)		 ParkinsonsUK-UCL PMID:14978030 MGI:5616326 NCBI chr 2:88,556,741...88,628,145
Ensembl chr 2:88,556,741...88,691,518 		JBrowse link
G NFE2L2 NFE2 like bZIP transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:177,230,303...177,264,727
Ensembl chr 2:177,218,667...177,392,756 		JBrowse link
regulation of glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC7A11 solute carrier family 7 member 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16037214) Ensembl
MGI		 PMID:16037214 GO_REF:0000107 NCBI chr 4:138,164,097...138,312,671
Ensembl chr 4:138,164,097...138,242,349 		JBrowse link
siderophore biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BDH2 3-hydroxybutyrate dehydrogenase 2 involved_in IEA
IBA
ISS		 InterPro
GO_Central
UniProt		 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 4:103,077,592...103,099,834
Ensembl chr 4:103,077,592...103,099,870 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19789
    cellular process 18958
      metabolic process 13083
        biosynthetic process 9417
          peptide biosynthetic process 27
            antimicrobial peptide biosynthetic process + 3
            bradykinin biosynthetic process 1
            nonribosomal peptide biosynthetic process + 19
            peptide antibiotic biosynthetic process + 0
paths to the root