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ONTOLOGY REPORT - ANNOTATIONS

Term:costamere
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Accession:GO:0043034 term browser browse the term
Definition:Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix.
Synonyms:xref: Wikipedia:Costamere


show annotations for term's descendants           Sort by:
costamere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahnak AHNAK nucleoprotein located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:205,882,225...205,970,934
Ensembl chr 1:205,882,273...205,970,926 		JBrowse link
G Ank2 ankyrin 2 located_in ISO (PMID:16292983) RGD PMID:16292983 NCBI chr 2:218,052,555...218,628,414
Ensembl chr 2:215,379,680...215,862,923 		JBrowse link
G Ank3 ankyrin 3 located_in TAS
IDA 		PMID:21223964
MMO:0000686 		BHF-UCL
RGD		 PMID:21223964 PMID:11171381 RGD:8554309, RGD:153344569 NCBI chr20:18,601,307...19,224,790
Ensembl chr20:18,602,786...19,086,300 		JBrowse link
G Cmya5 cardiomyopathy associated 5 located_in ISO (PMID:16407236), (PMID:18252718) RGD PMID:16407236 PMID:18252718 NCBI chr 2:24,279,520...24,378,253
Ensembl chr 2:24,279,528...24,378,364 		JBrowse link
G Dag1 dystroglycan 1 IDA RGD PMID:10531619 RGD:2314896 NCBI chr 8:117,769,517...117,834,347
Ensembl chr 8:108,890,929...108,952,325 		JBrowse link
G Dmd dystrophin located_in ISO (PMID:16000376) RGD PMID:16000376 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207 		JBrowse link
G Flnc filamin C located_in TAS PMID:21223964 BHF-UCL PMID:21223964 RGD:8554309 NCBI chr 4:58,999,445...59,027,240
Ensembl chr 4:58,034,189...58,061,844 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 located_in ISO (PMID:15128702) RGD PMID:15128702 NCBI chr 2:118,812,287...118,865,813
Ensembl chr 2:116,884,248...116,937,590 		JBrowse link
G Homer1 homer scaffold protein 1 located_in ISO
IEA 		(PMID:18268005)
GO_REF:0000107 		RGD
Ensembl		 PMID:18268005 GO_REF:0000107 NCBI chr 2:26,279,012...26,388,279
Ensembl chr 2:24,543,093...24,644,785 		JBrowse link
G Ilk integrin-linked kinase IDA RGD PMID:16170337 RGD:2302069 NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140 		JBrowse link
G Krt19 keratin 19 located_in ISO
IEA 		(PMID:16000376)
GO_REF:0000107 		RGD
Ensembl		 PMID:16000376 GO_REF:0000107 NCBI chr10:85,075,835...85,080,552
Ensembl chr10:85,066,802...85,171,799 		JBrowse link
G Krt8 keratin 8 IDA RGD PMID:15247274 RGD:1600063 NCBI chr 7:133,124,203...133,131,656
Ensembl chr 7:133,124,203...133,131,728 		JBrowse link
G Pgm5 phosphoglucomutase 5 located_in ISO
IEA 		(PMID:8175905)
GO_REF:0000107 		RGD
Ensembl		 PMID:8175905 GO_REF:0000107 NCBI chr 1:222,325,638...222,513,434
Ensembl chr 1:222,325,643...222,513,437 		JBrowse link
G Plec plectin located_in TAS PMID:21223964 BHF-UCL PMID:21223964 RGD:8554309 NCBI chr 7:109,768,447...109,829,798
Ensembl chr 7:107,887,764...107,945,467 		JBrowse link
G Sdc4 syndecan 4 IDA RGD PMID:12209563 RGD:729823 NCBI chr 3:173,574,239...173,592,923
Ensembl chr 3:153,154,896...153,173,580 		JBrowse link
G Smpx small muscle protein, X-linked is_active_in
located_in 		IBA
ISO 		GO_REF:0000033
(PMID:11381084) 		GO_Central
RGD		 PMID:11381084 GO_REF:0000033 NCBI chr  X:37,233,209...37,292,266
Ensembl chr  X:37,234,294...37,276,708 		JBrowse link
G Svil supervillin located_in ISO
IEA 		(PMID:12711699)
GO_REF:0000107 		RGD
Ensembl		 PMID:12711699 GO_REF:0000107 NCBI chr17:52,648,502...52,844,114
Ensembl chr17:52,648,502...52,793,404 		JBrowse link
G Synm synemin located_in
is_active_in 		ISO
IBA
IEA 		(PMID:16777071), (PMID:18342854)
GO_REF:0000033
GO_REF:0000107 		RGD
GO_Central
Ensembl		 PMID:16777071 PMID:18342854 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:121,333,712...121,363,652
Ensembl chr 1:121,333,720...121,363,652 		JBrowse link
G Trpc1 transient receptor potential cation channel, subfamily C, member 1 located_in ISO (PMID:18268005) RGD PMID:18268005 NCBI chr 8:96,263,322...96,314,220
Ensembl chr 8:96,263,329...96,314,276 		JBrowse link
G Vcl vinculin located_in IEA
ISO 		GO_REF:0000107
(PMID:9415431)
(PMID:15128702) 		Ensembl
RGD		 PMID:9415431 PMID:15128702 GO_REF:0000107 NCBI chr15:3,315,069...3,404,891
Ensembl chr15:3,265,815...3,355,606 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21349
    cellular anatomical structure 21053
      costamere 20
Path 2
Term Annotations click to browse term
  cellular_component 21349
    cellular anatomical structure 21053
      intracellular anatomical structure 15531
        intracellular organelle 13784
          intracellular membraneless organelle 5843
            contractile muscle fiber 267
              myofibril 253
                costamere 20
paths to the root