Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:ribosomal large subunit binding
go back to main search page
Accession:GO:0043023 term browser browse the term
Definition:Binding to a large ribosomal subunit.


show annotations for term's descendants           Sort by:
ribosomal large subunit binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07064719.2 enables IBA
IEA 		GO_REF:0000033
GO_REF:0000107 		GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000107
G AABR07071746.1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 8:119,988,743...119,989,532 JBrowse link
G Cpeb2 cytoplasmic polyadenylation element binding protein 2 enables IDA PMID:22157746 UniProt PMID:22157746 RGD:8553654 NCBI chr14:67,787,503...67,839,973
Ensembl chr14:67,787,507...67,840,743 		JBrowse link
G Cpsf6 cleavage and polyadenylation specific factor 6 enables ISO
IEA 		(PMID:19864460)
GO_REF:0000107 		RGD
Ensembl		 PMID:19864460 GO_REF:0000107 NCBI chr 7:52,956,589...53,001,783
Ensembl chr 7:52,956,589...52,988,122 		JBrowse link
G Dhx33 DEAH-box helicase 33 enables ISO
IEA 		UniProtKB:P39023|UniProtKB:P61254|UniProtKB:P61353|UniProtKB:Q9H6R0 (PMID:26100019)
GO_REF:0000107 		RGD
Ensembl		 PMID:26100019 GO_REF:0000107 NCBI chr10:55,708,102...55,724,618
Ensembl chr10:55,705,756...55,724,567 		JBrowse link
G Eif1a eukaryotic translation initiation factor 1A IDA RGD PMID:9191023 RGD:10755421 NCBI chr18:39,325,695...39,338,043
Ensembl chr18:39,325,202...39,338,696 		JBrowse link
G Eif6 eukaryotic translation initiation factor 6 enables IEA
IBA 		GO_REF:0000104
GO_REF:0000033 		UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 3:144,325,038...144,331,396
Ensembl chr 3:144,325,036...144,331,401 		JBrowse link
G Eif6-ps1 eukaryotic translation initiation factor 6, pseudogene 1 enables IBA
IEA 		GO_REF:0000033
GO_REF:0000104 		GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000104 NCBI chr14:81,584,117...81,585,052
Ensembl chr14:81,584,160...81,584,897 		JBrowse link
G Ltn1 listerin E3 ubiquitin protein ligase 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:40,090,169...40,147,159
Ensembl chr11:26,603,903...26,660,886 		JBrowse link
G Malsu1 mitochondrial assembly of ribosomal large subunit 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:78,051,090...78,059,913
Ensembl chr 4:78,051,059...78,059,905 		JBrowse link
G Mrrf mitochondrial ribosome recycling factor enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:19,487,124...19,543,911
Ensembl chr 3:19,487,182...19,543,908 		JBrowse link
G Mtres1 mitochondrial transcription rescue factor 1 enables ISO
IEA 		(PMID:33243891)
GO_REF:0000107 		RGD
Ensembl		 PMID:33243891 GO_REF:0000107 NCBI chr20:47,022,343...47,038,888
Ensembl chr20:47,022,342...47,038,805 		JBrowse link
G Mtrfr mitochondrial translation release factor in rescue enables ISO
IEA 		(PMID:33243891)
GO_REF:0000107 		RGD
Ensembl		 PMID:33243891 GO_REF:0000107 NCBI chr12:32,261,569...32,275,258
Ensembl chr12:32,258,435...32,275,258 		JBrowse link
G Nemf nuclear export mediator factor enables ISO
IEA
IBA 		(PMID:25578875)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:25578875 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:87,791,650...87,835,826
Ensembl chr 6:87,791,656...87,835,841 		JBrowse link
G Nmd3 NMD3 ribosome export adaptor enables ISO
IEA
IBA 		UniProtKB:O14980|UniProtKB:P62826 (PMID:12724356), (PMID:12773398)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000033 		RGD
Ensembl
InterPro
GO_Central		 PMID:12724356 PMID:12773398 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:154,012,973...154,038,466
Ensembl chr 2:154,013,020...154,039,259 		JBrowse link
G Npm1 nucleophosmin 1 enables ISO (PMID:18809582) RGD PMID:18809582 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
Ensembl chr  X:17,739,941...17,751,645 		JBrowse link
G Ola1 Obg-like ATPase 1 enables IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:57,966,896...58,085,955
Ensembl chr 3:57,966,896...58,084,480 		JBrowse link
G Rbm3 RNA binding motif protein 3 enables IBA
ISO 		GO_REF:0000033
PR:Q9D8E6 (PMID:15684048) 		GO_Central
RGD		 PMID:15684048 GO_REF:0000033 NCBI chr  X:14,348,909...14,352,387
Ensembl chr  X:14,348,910...14,353,580 		JBrowse link
mitochondrial large ribosomal subunit binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC134479940 mitochondrial ribosome and complex I assembly factor AltMIEF1 enables ISO (PMID:28892042), (PMID:30215512) RGD PMID:28892042 PMID:30215512 Ensembl chr 7:111,786,726...111,792,148 JBrowse link
G Malsu1 mitochondrial assembly of ribosomal large subunit 1 enables ISO (PMID:28892042) RGD PMID:28892042 NCBI chr 4:78,051,090...78,059,913
Ensembl chr 4:78,051,059...78,059,905 		JBrowse link
G Mief1 mitochondrial elongation factor 1 enables ISO (PMID:28892042), (PMID:30215512) RGD PMID:28892042 PMID:30215512 NCBI chr 7:111,786,630...111,802,220
Ensembl chr 7:111,786,709...111,802,220 		JBrowse link
G Mpv17l2 MPV17 mitochondrial inner membrane protein like 2 enables ISO
IEA 		(PMID:24948607)
GO_REF:0000107 		RGD
Ensembl		 PMID:24948607 GO_REF:0000107 NCBI chr16:18,680,106...18,684,212
Ensembl chr16:18,681,826...18,684,212 		JBrowse link
G Ndufab1 NADH:ubiquinone oxidoreductase subunit AB1 enables ISO (PMID:28892042) RGD PMID:28892042 NCBI chr 1:176,644,696...176,658,131
Ensembl chr 1:176,644,703...176,658,099 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 21102
    binding 18100
      protein-containing complex binding 1648
        ribonucleoprotein complex binding 215
          ribosome binding 125
            ribosomal large subunit binding 22
              mitochondrial large ribosomal subunit binding 5
paths to the root