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ONTOLOGY REPORT - ANNOTATIONS


Term:myeloid dendritic cell differentiation
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Accession:GO:0043011 term browser browse the term
Definition:The process in which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin.
Synonyms:xref: Wikipedia:Dendritic_cell



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myeloid dendritic cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B9D2 B9 domain containing 2 acts_upstream_of_or_within ISO (MGI:3760597|PMID:17938236) MGI PMID:17938236 MGI:3760597 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G BATF basic leucine zipper ATF-like transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:48,537,036...48,561,154 JBrowse link
G BATF2 basic leucine zipper ATF-like transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:52,176,681...52,196,365
Ensembl chr18:52,175,549...52,195,404
JBrowse link
G BATF3 basic leucine zipper ATF-like transcription factor 3 acts_upstream_of_or_within
involved_in
ISO (MGI:5562510|PMID:23913046)
(MGI:3815335|PMID:19008445)
MGI
UniProt
PMID:19008445 PMID:23913046 MGI:3815335 MGI:5562510 NCBI chr 7:10,843,859...10,854,269
Ensembl chr 7:10,843,850...10,857,847
JBrowse link
G CAMK4 calcium/calmodulin dependent protein kinase IV involved_in ISO (PMID:17909078) UniProt PMID:17909078 NCBI chr 3:1,174,975...1,369,640
Ensembl chr 3:1,180,401...1,369,803
JBrowse link
G CD86 CD86 molecule ISO RGD PMID:21039614 RGD:4892198 NCBI chr33:25,256,267...25,318,855
Ensembl chr33:25,256,267...25,318,087
JBrowse link
G CSF2 colony stimulating factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2180258|PMID:12021780) Ensembl
MGI
PMID:12021780 GO_REF:0000107 MGI:2180258 NCBI chr11:20,342,880...20,346,959
Ensembl chr11:20,344,648...20,346,959
JBrowse link
G DCSTAMP dendrocyte expressed seven transmembrane protein involved_in ISO (MGI:5319610|PMID:17713547) UniProt PMID:17713547 MGI:5319610 NCBI chr13:5,542,474...5,559,433
Ensembl chr13:5,542,425...5,571,968
JBrowse link
G DHRS2 dehydrogenase/reductase 2 involved_in ISO (PMID:11944995) UniProt PMID:11944995 NCBI chr 8:3,820,269...3,847,217
Ensembl chr 8:3,836,476...3,845,916
JBrowse link
G IL4 interleukin 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:20,972,693...20,981,539
Ensembl chr11:20,972,690...20,981,534
JBrowse link
G IRF4 interferon regulatory factor 4 involved_in
acts_upstream_of_or_within
ISO (MGI:5441724|PMID:22992524)
(MGI:3045824|PMID:15184678)
UniProt
MGI
PMID:15184678 PMID:22992524 MGI:3045824 MGI:5441724 NCBI chr35:760,367...782,314
Ensembl chr35:767,011...781,339
JBrowse link
G LOC100687459 GTPase IMAP family member 5 ISO RGD PMID:15922563 RGD:2303773 NCBI chr16:14,887,308...14,895,522 JBrowse link
G LOC611446 leukocyte immunoglobulin-like receptor subfamily A member 6 acts_upstream_of_or_within ISO (MGI:2180258|PMID:12021780) MGI PMID:12021780 MGI:2180258 NCBI chr 1:102,955,916...102,978,669 JBrowse link
G LTBR lymphotoxin beta receptor acts_upstream_of_or_within ISO (MGI:5562510|PMID:23913046) MGI PMID:23913046 MGI:5562510 NCBI chr27:38,598,725...38,605,829
Ensembl chr27:38,599,268...38,605,780
JBrowse link
G NOTCH2 notch receptor 2 acts_upstream_of_or_within ISO (MGI:5562510|PMID:23913046) MGI PMID:23913046 MGI:5562510 NCBI chr17:56,854,825...57,020,157
Ensembl chr17:56,860,429...57,020,857
JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5562510|PMID:23913046) Ensembl
MGI
PMID:23913046 GO_REF:0000107 MGI:5562510 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532
JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO (MGI:5562510|PMID:23913046) MGI PMID:23913046 MGI:5562510 NCBI chr 3:84,060,417...84,286,008
Ensembl chr 3:84,064,440...84,286,360
JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit acts_upstream_of_or_within ISO (MGI:2677080|PMID:14499111), (MGI:70877|PMID:7845467) MGI PMID:7845467 PMID:14499111 MGI:2677080 MGI:70877 NCBI chr 1:110,436,677...110,466,709
Ensembl chr 1:110,436,662...110,466,809
JBrowse link
G SPI1 Spi-1 proto-oncogene acts_upstream_of_or_within ISO (MGI:1352309|PMID:10648399) MGI PMID:10648399 MGI:1352309 NCBI chr18:42,253,849...42,269,497
Ensembl chr18:42,253,811...42,269,727
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 acts_upstream_of_or_within ISO (MGI:3760597|PMID:17938236) MGI PMID:17938236 MGI:3760597 NCBI chr23:13,886,869...13,946,480
Ensembl chr23:13,889,000...13,977,636
JBrowse link
G TNFSF9 TNF superfamily member 9 ISO RGD PMID:18687212 RGD:2317345 NCBI chr20:53,680,882...53,682,521
Ensembl chr20:53,679,880...53,682,706
JBrowse link
G TRAF6 TNF receptor associated factor 6 acts_upstream_of_or_within ISO (MGI:2677080|PMID:14499111) MGI PMID:14499111 MGI:2677080 NCBI chr18:31,674,242...31,689,160
Ensembl chr18:31,675,391...31,688,641
JBrowse link
G UBD ubiquitin D involved_in ISO (PMID:19028597) UniProt PMID:19028597 NCBI chr35:26,426,919...26,436,189 JBrowse link
Langerhans cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITGB6 integrin subunit beta 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3836488|PMID:19118215) Ensembl
MGI
PMID:19118215 GO_REF:0000107 MGI:3836488 NCBI chr36:5,833,206...5,962,699
Ensembl chr36:5,834,638...5,962,633
JBrowse link
G ITGB8 integrin subunit beta 8 acts_upstream_of_or_within ISO (MGI:3836488|PMID:19118215) MGI PMID:19118215 MGI:3836488 NCBI chr14:34,370,957...34,449,091
Ensembl chr14:34,349,232...34,444,235
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 13972
    immune system process 2218
      leukocyte activation 901
        myeloid leukocyte activation 248
          myeloid dendritic cell activation 39
            myeloid dendritic cell differentiation 25
              Langerhans cell differentiation 2
              myeloid dendritic cell differentiation involved in immune response 0
Path 2
Term Annotations click to browse term
  biological_process 13972
    developmental process 6206
      anatomical structure development 5776
        multicellular organism development 5265
          system development 4934
            animal organ development 3804
              hematopoietic or lymphoid organ development 978
                hemopoiesis 930
                  leukocyte differentiation 583
                    mononuclear cell differentiation 447
                      dendritic cell differentiation 49
                        myeloid dendritic cell differentiation 25
                          Langerhans cell differentiation 2
                          myeloid dendritic cell differentiation involved in immune response 0
paths to the root