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ONTOLOGY REPORT - ANNOTATIONS

Term:camera-type eye development
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Accession:GO:0043010 term browser browse the term
Definition:The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field.
Synonyms:alt_id: GO:0001747;   GO:0031075
 never_in_taxon: NCBITaxon:6656 ! Arthropoda


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camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI2 abl interactor 2 acts_upstream_of_or_within ISO (PMID:15572692) MGI PMID:15572692 NCBI chr15:106,776,627...106,903,889
Ensembl chr15:106,776,631...106,900,333 		JBrowse link
G AHR aryl hydrocarbon receptor involved_in ISO (PMID:10973493) DFLAT PMID:10973493 NCBI chr 9:86,511,866...86,555,950
Ensembl chr 9:86,511,369...86,555,943 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15366004)
(PMID:16368932)		 Ensembl
MGI		 PMID:15366004 PMID:16368932 GO_REF:0000107 NCBI chr 1:113,932,722...114,037,059
Ensembl chr 1:113,932,739...114,037,046 		JBrowse link
G ARHGAP35 Rho GTPase activating protein 35 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11044403) Ensembl
MGI		 PMID:11044403 GO_REF:0000107 NCBI chr 6:52,711,463...52,841,295
Ensembl chr 6:52,711,901...52,841,288 		JBrowse link
G B3GLCT beta 3-glucosyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31600785) MGI
Ensembl		 PMID:31600785 GO_REF:0000107 NCBI chr11:7,792,160...7,907,052
Ensembl chr11:7,792,368...7,907,049 		JBrowse link
G B9D1 B9 domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22179047) Ensembl
MGI		 PMID:22179047 GO_REF:0000107 NCBI chr12:60,162,656...60,171,586
Ensembl chr12:60,162,713...60,171,961 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9268572)
(PMID:14681194)		 Ensembl
MGI		 PMID:9268572 PMID:14681194 GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15673568) Ensembl
MGI		 PMID:15673568 GO_REF:0000107 NCBI chr 8:124,536,648...125,035,841
Ensembl chr 8:124,536,653...124,759,406 		JBrowse link
G CACNA1C calcium voltage-gated channel subunit alpha1 C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:69,016,954...69,448,428
Ensembl chr 5:69,275,176...69,454,459 		JBrowse link
G CC2D2A coiled-coil and C2 domain containing 2A acts_upstream_of_or_within ISO (PMID:24947469) MGI PMID:24947469 NCBI chr 8:10,779,206...10,898,189
Ensembl chr 8:10,779,334...10,898,196 		JBrowse link
G CDKN1C cyclin dependent kinase inhibitor 1C acts_upstream_of_or_within ISO (PMID:19276117) MGI PMID:19276117 NCBI chr 2:2,019,391...2,022,092
Ensembl chr 2:2,019,830...2,021,853 		JBrowse link
G CEP290 centrosomal protein 290 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:94,384,397...94,474,337
Ensembl chr 5:94,384,415...94,474,335 		JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16207732) Ensembl
MGI		 PMID:16207732 GO_REF:0000107 NCBI chr 4:72,572,455...72,754,443
Ensembl chr 4:72,573,453...72,694,146 		JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within ISO (PMID:12546709) MGI PMID:12546709 NCBI chr13:206,293,877...206,297,050
Ensembl chr13:206,293,849...206,297,015 		JBrowse link
G CRYAB crystallin alpha B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12546709) Ensembl
MGI		 PMID:12546709 GO_REF:0000107 NCBI chr 9:39,638,505...39,643,530
Ensembl chr 9:39,638,506...39,643,530 		JBrowse link
G CRYBA1 crystallin beta A1 acts_upstream_of_or_within ISO (PMID:10585769) MGI PMID:10585769 NCBI chr12:45,466,051...45,473,110
Ensembl chr12:45,466,520...45,473,092 		JBrowse link
G CRYBA4 crystallin beta A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:44,212,690...44,219,163
Ensembl chr14:44,194,592...44,219,163 		JBrowse link
G CRYBB2 crystallin beta B2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11381063) RGD
MGI
Ensembl		 PMID:8706714 PMID:11381063 GO_REF:0000107 RGD:1298813 NCBI chr14:43,206,138...43,220,833
Ensembl chr14:43,209,311...43,220,837 		JBrowse link
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 ISO RGD PMID:15967433 RGD:2306661 NCBI chr 7:58,802,887...58,809,155
Ensembl chr 7:58,802,887...58,809,775 		JBrowse link
G EFEMP1 EGF containing fibulin extracellular matrix protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:85,407,677...85,473,251
Ensembl chr 3:85,407,677...85,473,252 		JBrowse link
G FAT1 FAT atypical cadherin 1 involved_in ISO (PMID:26114487) MGI PMID:26114487 NCBI chr17:8,466,099...8,580,715
Ensembl chr17:8,457,187...8,580,715 		JBrowse link
G FBN1 fibrillin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:123,102,011...123,359,649
Ensembl chr 1:123,102,009...123,359,649 		JBrowse link
G FBN2 fibrillin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:131,150,665...131,370,241
Ensembl chr 2:131,150,667...131,370,466 		JBrowse link
G FKBP8 FKBP prolyl isomerase 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15105374) Ensembl
MGI		 PMID:15105374 GO_REF:0000107 NCBI chr 2:59,256,546...59,267,171
Ensembl chr 2:59,253,342...59,267,165 		JBrowse link
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23591631)
(PMID:19155270)		 Ensembl
MGI		 PMID:19155270 PMID:23591631 GO_REF:0000107 NCBI chr 6:52,627,466...52,639,255
Ensembl chr 6:52,627,471...52,639,253 		JBrowse link
G FOXC1 forkhead box C1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10767326)
(PMID:10395790)		 Ensembl
MGI		 PMID:10395790 PMID:10767326 GO_REF:0000107 NCBI chr 7:837,088...840,593
Ensembl chr 7:837,171...838,805 		JBrowse link
G FOXC2 forkhead box C2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10767326) Ensembl
MGI		 PMID:10767326 GO_REF:0000107 NCBI chr 6:2,552,141...2,555,041
Ensembl chr 6:2,552,862...2,554,367 		JBrowse link
G FOXE3 forkhead box E3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11309658) Ensembl
MGI		 PMID:11309658 GO_REF:0000107 NCBI chr 6:164,130,638...164,133,218
Ensembl chr 6:164,132,034...164,133,011 		JBrowse link
G FOXP2 forkhead box P2 acts_upstream_of_or_within ISO (PMID:17619227) MGI PMID:17619227 NCBI chr18:31,335,102...31,890,523
Ensembl chr18:31,335,264...31,888,845 		JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:17525797) MGI PMID:17525797 NCBI chr10:28,509,168...28,511,554
Ensembl chr10:28,509,261...28,510,301 		JBrowse link
G GJA8 gap junction protein alpha 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11782410)
(PMID:15253273)		 Ensembl
MGI		 PMID:11782410 PMID:15253273 GO_REF:0000107 NCBI chr 4:99,721,754...99,724,943
Ensembl chr 4:99,723,341...99,724,672 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18582859) Ensembl
MGI		 PMID:18582859 GO_REF:0000107 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,072...52,697,900 		JBrowse link
G GNAT2 G protein subunit alpha transducin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32049342) Ensembl
MGI		 PMID:32049342 GO_REF:0000107 NCBI chr 4:110,512,349...110,523,222
Ensembl chr 4:110,498,707...110,524,072 		JBrowse link
G GPD2 glycerol-3-phosphate dehydrogenase 2 acts_upstream_of_or_within ISO (PMID:21296886) MGI PMID:21296886 NCBI chr15:63,592,723...63,728,636
Ensembl chr15:63,619,762...63,728,633 		JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21377456) Ensembl
MGI		 PMID:21377456 GO_REF:0000107 NCBI chr 4:35,368,788...35,565,394
Ensembl chr 4:35,371,136...35,564,919 		JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:64,409,110...64,410,541
Ensembl chr 6:64,408,956...64,410,881 		JBrowse link
G HESX1 HESX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19093031) Ensembl
MGI		 PMID:19093031 GO_REF:0000107 NCBI chr13:39,046,961...39,088,926
Ensembl chr13:39,046,465...39,088,875 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:16488668 RGD:10002779 NCBI chr10:30,975,639...30,987,955
Ensembl chr10:30,975,702...30,987,956 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18582859) Ensembl
MGI		 PMID:18582859 GO_REF:0000107 NCBI chr15:121,083,750...121,090,548
Ensembl chr15:121,083,753...121,090,121 		JBrowse link
G JAG1 jagged canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10196361) Ensembl
MGI		 PMID:10196361 GO_REF:0000107 NCBI chr17:19,591,248...19,629,659
Ensembl chr17:19,591,259...19,629,641 		JBrowse link
G LAMA1 laminin subunit alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:100,332,843...100,468,457
Ensembl chr 6:100,332,956...100,468,454 		JBrowse link
G LIM2 lens intrinsic membrane protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9238094) Ensembl
MGI		 PMID:9238094 GO_REF:0000107 NCBI chr 6:58,482,690...58,489,711
Ensembl chr 6:58,481,686...58,489,279 		JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:20568247)
(PMID:10660670)		 MGI PMID:10660670 PMID:20568247 NCBI chr 1:267,207,273...267,290,862
Ensembl chr 1:267,207,419...267,287,729 		JBrowse link
G LOC110257071 gamma-crystallin C-like acts_upstream_of_or_within ISO (PMID:11773036) MGI PMID:11773036 NCBI chr15:111,256,707...111,258,291
Ensembl chr15:111,256,725...111,258,277 		JBrowse link
G MAB21L1 mab-21 like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12642482) Ensembl
MGI		 PMID:12642482 GO_REF:0000107 NCBI chr11:11,518,398...11,521,636
Ensembl chr11:11,519,734...11,521,136 		JBrowse link
G MAB21L2 mab-21 like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15385160) Ensembl
MGI		 PMID:15385160 GO_REF:0000107 NCBI chr 8:78,385,176...78,388,008
Ensembl chr 8:78,385,764...78,386,843 		JBrowse link
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 acts_upstream_of_or_within ISO (PMID:12941696) MGI PMID:12941696 NCBI chr16:35,872,301...35,947,097
Ensembl chr16:35,872,131...35,946,987 		JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14500757) Ensembl
MGI		 PMID:14500757 GO_REF:0000107 NCBI chr12:22,830,405...22,872,420
Ensembl chr12:22,841,205...22,872,409 		JBrowse link
G MITF melanocyte inducing transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15576400) Ensembl
MGI		 PMID:15576400 GO_REF:0000107 NCBI chr13:51,177,356...51,422,096
Ensembl chr13:51,178,203...51,422,093 		JBrowse link
G MTNR1A melatonin receptor 1A ISO RGD PMID:12890503 RGD:9588674 NCBI chr17:8,597,047...8,618,746
Ensembl chr17:8,596,911...8,617,657 		JBrowse link
G MTNR1B melatonin receptor 1B ISO RGD PMID:12890503 RGD:9588674 NCBI chr 9:25,556,756...25,557,792
Ensembl chr 9:25,545,390...25,558,054 		JBrowse link
G MYF5 myogenic factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19531352) Ensembl
MGI		 PMID:19531352 GO_REF:0000107 NCBI chr 5:100,753,440...100,755,558
Ensembl chr 5:100,752,890...100,755,494 		JBrowse link
G NEUROD1 neuronal differentiation 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11861467) Ensembl
MGI		 PMID:11861467 GO_REF:0000107 NCBI chr15:87,175,629...87,179,953
Ensembl chr15:87,175,765...87,179,959 		JBrowse link
G NEUROD4 neuronal differentiation 4 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:11861467) Ensembl
GO_Central
MGI		 PMID:11861467 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:20,046,864...20,057,380
Ensembl chr 5:20,046,937...20,059,128 		JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:18477394) MGI PMID:18477394 NCBI chr 2:65,954,808...66,056,591
Ensembl chr 2:65,954,811...66,056,567 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16000615)
(PMID:15371513)		 Ensembl
MGI		 PMID:15371513 PMID:16000615 GO_REF:0000107 NCBI chr 1:74,266,667...74,292,686
Ensembl chr 1:74,271,042...74,292,681 		JBrowse link
G PASK PAS domain containing serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21531335) Ensembl
MGI		 PMID:21531335 GO_REF:0000107 NCBI chr15:139,881,217...139,887,505
Ensembl chr15:139,881,222...139,887,032 		JBrowse link
G PAX2 paired box 2 acts_upstream_of_or_within ISO (PMID:12756174) MGI PMID:12756174 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,823,308...111,913,969 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12648492), (PMID:16080917)
(PMID:12072567)
(PMID:12183364)
(PMID:11062307)
(PMID:12756174)
(PMID:11069887)		 Ensembl
MGI		 PMID:11062307 PMID:11069887 PMID:12072567 PMID:12183364 PMID:12648492 More... GO_REF:0000107 NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,978,287...29,001,200 		JBrowse link
G PCNT pericentrin acts_upstream_of_or_within ISO (PMID:25220058) MGI PMID:25220058
G PITX2 paired like homeodomain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:111,697,364...111,723,295
Ensembl chr 8:111,698,757...111,723,298 		JBrowse link
G PKNOX1 PBX/knotted 1 homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16847320) Ensembl
MGI		 PMID:16847320 GO_REF:0000107 NCBI chr13:206,159,264...206,195,471
Ensembl chr13:206,167,156...206,195,468 		JBrowse link
G PRSS56 serine protease 56 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21532570) Ensembl
MGI		 PMID:21532570 GO_REF:0000107 NCBI chr15:133,033,848...133,039,583
Ensembl chr15:133,034,255...133,039,367 		JBrowse link
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:16,756,368...16,893,148
Ensembl chr15:16,763,990...16,816,754 		JBrowse link
G RAX retina and anterior neural fold homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11105055), (PMID:15789424)
(PMID:13970081), (PMID:17247120), (PMID:640224)		 Ensembl
MGI		 PMID:640224 PMID:11105055 PMID:13970081 PMID:15789424 PMID:17247120 GO_REF:0000107 NCBI chr 1:161,679,154...161,683,486
Ensembl chr 1:161,678,955...161,683,060 		JBrowse link
G RCN1 reticulocalbin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19474196) Ensembl
MGI		 PMID:19474196 GO_REF:0000107 NCBI chr 2:28,696,528...28,714,083
Ensembl chr 2:28,696,661...28,709,672 		JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 ISO RGD PMID:9512345 RGD:633787 NCBI chr 6:144,206,078...144,229,471
Ensembl chr 6:144,206,078...144,229,467 		JBrowse link
G RPGRIP1L RPGRIP1 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17553904), (PMID:17558409) Ensembl
MGI		 PMID:17553904 PMID:17558409 GO_REF:0000107 NCBI chr 6:31,564,937...31,660,540
Ensembl chr 6:31,564,986...31,661,190 		JBrowse link
G RXRA retinoid X receptor alpha acts_upstream_of_or_within ISO (PMID:9376317) MGI PMID:9376317 NCBI chr 1:273,698,842...273,797,622
Ensembl chr 1:273,705,505...273,797,620 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18582859)
(PMID:12195432)
(PMID:12756179)
(PMID:16236765)		 Ensembl
MGI		 PMID:12195432 PMID:12756179 PMID:16236765 PMID:18582859 GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484 		JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within ISO (PMID:12072567) MGI PMID:12072567 NCBI chr 3:95,521,330...95,527,004
Ensembl chr 3:95,521,334...95,525,436 		JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (PMID:11731796) MGI PMID:11731796 NCBI chr 6:64,188,265...64,242,596
Ensembl chr 6:64,188,236...64,242,560 		JBrowse link
G SLC25A25 solute carrier family 25 member 25 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21296886) Ensembl
MGI		 PMID:21296886 GO_REF:0000107 NCBI chr 1:268,531,752...268,575,195
Ensembl chr 1:268,531,752...268,576,994 		JBrowse link
G SLITRK6 SLIT and NTRK like family member 6 acts_upstream_of_or_within ISO (PMID:23543054) MGI PMID:23543054 NCBI chr11:56,508,713...56,522,270
Ensembl chr11:56,508,767...56,522,197 		JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:59,317,930...59,347,274
Ensembl chr 7:59,318,011...59,347,266 		JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14757819) Ensembl
MGI		 PMID:14757819 GO_REF:0000107 NCBI chr17:34,760,379...34,778,301
Ensembl chr17:34,760,347...34,779,701 		JBrowse link
G TBC1D32 TBC1 domain family member 32 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20159594) Ensembl
MGI		 PMID:20159594 GO_REF:0000107 NCBI chr 1:41,057,782...41,265,416
Ensembl chr 1:41,057,838...41,265,375 		JBrowse link
G TMEM231 transmembrane protein 231 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22179047) Ensembl
MGI		 PMID:22179047 GO_REF:0000107 NCBI chr 6:12,140,317...12,163,894
Ensembl chr 6:12,140,687...12,164,140 		JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21856951) Ensembl
MGI		 PMID:21856951 GO_REF:0000107 NCBI chr 9:10,927,224...10,940,851
Ensembl chr 9:10,927,342...10,942,668 		JBrowse link
G TWSG1 twisted gastrulation BMP signaling modulator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14681194) Ensembl
MGI		 PMID:14681194 GO_REF:0000107 NCBI chr 6:98,629,116...98,678,322
Ensembl chr 6:98,625,505...98,678,258 		JBrowse link
G VAX1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15905411) Ensembl
MGI		 PMID:15905411 GO_REF:0000107 NCBI chr14:127,269,723...127,277,007
Ensembl chr14:127,271,566...127,275,744 		JBrowse link
G VAX2 ventral anterior homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15905411) Ensembl
MGI		 PMID:15905411 GO_REF:0000107 NCBI chr 3:71,593,807...71,622,487
Ensembl chr 3:71,593,812...71,622,444 		JBrowse link
G VSX2 visual system homeobox 2 acts_upstream_of_or_within ISO (PMID:15576400) MGI PMID:15576400 NCBI chr 7:97,532,021...97,551,072
Ensembl chr 7:97,531,860...97,552,033 		JBrowse link
G WDPCP WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24302887) Ensembl
MGI		 PMID:24302887 GO_REF:0000107 NCBI chr 3:78,435,154...78,726,313
Ensembl chr 3:78,268,922...78,856,893 		JBrowse link
G WT1 WT1 transcription factor involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:11889045) UniProt
MGI		 PMID:11889045 GO_REF:0000024 NCBI chr 2:28,411,467...28,456,007
Ensembl chr 2:28,411,803...28,455,997 		JBrowse link
amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BARHL2 BarH like homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14998930) Ensembl
MGI		 PMID:14998930 GO_REF:0000107 NCBI chr 4:126,030,373...126,035,662
Ensembl chr 4:126,029,437...126,036,210 		JBrowse link
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:17092954) MGI PMID:17092954 NCBI chr 4:69,801,619...69,803,375
Ensembl chr 4:69,802,200...69,803,309 		JBrowse link
G FOXN4 forkhead box N4 acts_upstream_of_or_within
involved_in		 ISO (PMID:15363391) MGI
UniProt		 PMID:15363391 NCBI chr14:41,589,128...41,614,488 JBrowse link
G GDF11 growth differentiation factor 11 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15976303) Ensembl
MGI		 PMID:15976303 GO_REF:0000107 NCBI chr 5:21,191,322...21,199,024
Ensembl chr 5:21,191,251...21,201,804 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16038893) Ensembl
MGI		 PMID:16038893 GO_REF:0000107 NCBI chr13:131,135,970...131,137,865
Ensembl chr13:131,135,725...131,138,237 		JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:25654255) MGI PMID:25654255 NCBI chr 9:136,372,202...136,464,942
Ensembl chr 9:136,372,725...136,464,940 		JBrowse link
G NEUROD1 neuronal differentiation 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:87,175,629...87,179,953
Ensembl chr15:87,175,765...87,179,959 		JBrowse link
G NEUROD4 neuronal differentiation 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:20,046,864...20,057,380
Ensembl chr 5:20,046,937...20,059,128 		JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17301087) Ensembl
MGI		 PMID:17301087 GO_REF:0000107 NCBI chr10:51,817,697...51,820,147
Ensembl chr10:51,817,924...51,819,960 		JBrowse link
G RORB RAR related orphan receptor B involved_in ISO (PMID:23652001) UniProt PMID:23652001 NCBI chr 1:227,573,972...227,776,806
Ensembl chr 1:227,574,648...227,772,671 		JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of ISO (PMID:18973577) MGI PMID:18973577 NCBI chr 6:103,226,395...103,234,591
Ensembl chr 6:103,226,402...103,234,610 		JBrowse link
G TGIF2 TGFB induced factor homeobox 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:18926818) Ensembl
MGI		 PMID:18926818 GO_REF:0000107 NCBI chr17:39,840,649...39,858,162
Ensembl chr17:39,675,088...39,858,154 		JBrowse link
camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27687499) MGI
Ensembl		 PMID:27687499 GO_REF:0000107 NCBI chr13:46,033,753...46,209,238
Ensembl chr13:46,034,833...46,207,006 		JBrowse link
G AQP1 aquaporin 1 (Colton blood group) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11891232) Ensembl
MGI		 PMID:11891232 GO_REF:0000107 NCBI chr18:42,063,482...42,076,741
Ensembl chr18:42,063,485...42,076,746 		JBrowse link
G AQP5 aquaporin 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11891232) MGI
Ensembl		 PMID:11891232 GO_REF:0000107 NCBI chr 5:15,876,527...15,879,608
Ensembl chr 5:15,876,407...15,880,067 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9268572) Ensembl
MGI		 PMID:9268572 GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16154126)
(PMID:16854970)		 Ensembl
MGI		 PMID:16154126 PMID:16854970 GO_REF:0000107 NCBI chr17:57,567,770...57,676,516
Ensembl chr17:57,584,956...57,675,986 		JBrowse link
G C5H12orf57 chromosome 5 C12orf57 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:63,779,510...63,781,307
Ensembl chr 5:63,779,513...63,781,517 		JBrowse link
G COL8A1 collagen type VIII alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16051690) Ensembl
MGI		 PMID:16051690 GO_REF:0000107 NCBI chr13:159,216,138...159,374,718
Ensembl chr13:159,216,144...159,374,576 		JBrowse link
G COL8A2 collagen type VIII alpha 2 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16051690) Ensembl
MGI		 PMID:16051690 GO_REF:0000107 NCBI chr 6:92,246,047...92,272,046
Ensembl chr 6:92,247,171...92,271,529 		JBrowse link
G EPHB1 EPH receptor B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12971893) Ensembl
MGI		 PMID:12971893 GO_REF:0000107 NCBI chr13:75,904,678...76,351,540
Ensembl chr13:75,905,676...76,345,534 		JBrowse link
G EPHB2 EPH receptor B2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12971893) Ensembl
MGI		 PMID:12971893 GO_REF:0000107 NCBI chr 6:80,649,098...80,849,979
Ensembl chr 6:80,650,740...80,843,567 		JBrowse link
G FAT1 FAT atypical cadherin 1 involved_in ISO (PMID:26114487) MGI PMID:26114487 NCBI chr17:8,466,099...8,580,715
Ensembl chr17:8,457,187...8,580,715 		JBrowse link
G GDF11 growth differentiation factor 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15976303) Ensembl
MGI		 PMID:15976303 GO_REF:0000107 NCBI chr 5:21,191,322...21,199,024
Ensembl chr 5:21,191,251...21,201,804 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8387379) Ensembl
MGI		 PMID:8387379 GO_REF:0000107 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,072...52,697,900 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22627278) Ensembl
MGI		 PMID:22627278 GO_REF:0000107 NCBI chr 1:190,625,436...190,673,926
Ensembl chr 1:190,625,244...190,674,845 		JBrowse link
G IFT122 intraflagellar transport 122 involved_in ISO (PMID:19000668) UniProt PMID:19000668 NCBI chr13:68,828,710...68,902,062
Ensembl chr13:68,828,719...68,902,060 		JBrowse link
G MFN2 mitofusin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16104381) Ensembl
MGI		 PMID:16104381 GO_REF:0000107 NCBI chr 6:72,026,512...72,056,439
Ensembl chr 6:72,028,499...72,056,438 		JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728677) Ensembl
MGI		 PMID:15728677 GO_REF:0000107 NCBI chr 9:46,823,552...46,891,564
Ensembl chr 9:46,789,726...46,891,304 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:7926784) MGI PMID:7926784 NCBI chr12:43,487,098...43,754,205
Ensembl chr12:43,489,813...43,753,969 		JBrowse link
G RING1 ring finger protein 1 acts_upstream_of_or_within ISO (PMID:16624538) MGI PMID:16624538 NCBI chr 7:25,251,507...25,255,526
Ensembl chr 7:25,251,486...25,255,522 		JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (PMID:17003410) MGI PMID:17003410 NCBI chr 6:64,188,265...64,242,596
Ensembl chr 6:64,188,236...64,242,560 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:129,797,438...129,800,568
Ensembl chr 3:129,798,854...129,800,197 		JBrowse link
G SOX12 SRY-box transcription factor 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:34,855,149...34,858,434
Ensembl chr17:34,857,022...34,857,960 		JBrowse link
G SOX4 SRY-box transcription factor 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:16,886,834...16,895,488
Ensembl chr 7:16,891,319...16,892,752 		JBrowse link
G TENM3 teneurin transmembrane protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:41,818,190...44,401,747
Ensembl chr15:43,540,375...44,399,711 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16251428) Ensembl
MGI		 PMID:16251428 GO_REF:0000107 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,366 		JBrowse link
G VHL von Hippel-Lindau tumor suppressor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22627278) Ensembl
MGI		 PMID:22627278 GO_REF:0000107 NCBI chr13:66,334,535...66,342,401
Ensembl chr13:66,334,591...66,342,654 		JBrowse link
G YY1 YY1 transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16624538) Ensembl
MGI		 PMID:16624538 GO_REF:0000107 NCBI chr 7:121,132,168...121,170,699
Ensembl chr 7:121,132,191...121,170,697 		JBrowse link
camera-type eye photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PROM1 prominin 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:11,215,659...11,331,442
Ensembl chr 8:11,215,663...11,317,312 		JBrowse link
G ROM1 retinal outer segment membrane protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20300562) Ensembl
MGI		 PMID:20300562 GO_REF:0000107 NCBI chr 2:9,125,377...9,127,615
Ensembl chr 2:9,125,381...9,127,615 		JBrowse link
G SDK2 sidekick cell adhesion molecule 2 involved_in ISO (PMID:26287463) UniProt PMID:26287463 NCBI chr12:7,332,052...7,617,231 JBrowse link
G SLC4A7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO (PMID:12808454) MGI PMID:12808454 NCBI chr13:13,933,552...14,043,108
Ensembl chr13:13,933,711...14,043,058 		JBrowse link
G TTC8 tetratricopeptide repeat domain 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21646512) Ensembl
MGI		 PMID:21646512 GO_REF:0000107 NCBI chr 7:110,731,729...110,783,999
Ensembl chr 7:110,731,731...110,784,853 		JBrowse link
camera-type eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18582859) Ensembl
MGI		 PMID:18582859 GO_REF:0000107 NCBI chr15:121,083,750...121,090,548
Ensembl chr15:121,083,753...121,090,121 		JBrowse link
ciliary body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXE3 forkhead box E3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:164,130,638...164,133,218
Ensembl chr 6:164,132,034...164,133,011 		JBrowse link
G JAG1 jagged canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23676271) Ensembl
MGI		 PMID:23676271 GO_REF:0000107 NCBI chr17:19,591,248...19,629,659
Ensembl chr17:19,591,259...19,629,641 		JBrowse link
G NOTCH2 notch receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23676271) Ensembl
MGI		 PMID:23676271 GO_REF:0000107 NCBI chr 4:100,951,522...101,152,348
Ensembl chr 4:100,981,636...101,150,195 		JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21856951) Ensembl
MGI		 PMID:21856951 GO_REF:0000107 NCBI chr 9:10,927,224...10,940,851
Ensembl chr 9:10,927,342...10,942,668 		JBrowse link
G VHL von Hippel-Lindau tumor suppressor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22627278) Ensembl
MGI		 PMID:22627278 GO_REF:0000107 NCBI chr13:66,334,535...66,342,401
Ensembl chr13:66,334,591...66,342,654 		JBrowse link
closure of optic fissure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MED18 mediator complex subunit 18 involved_in IEA UniProt GO_REF:0000104 NCBI chr 6:85,384,085...85,392,296
Ensembl chr 6:85,384,080...85,392,291 		JBrowse link
G PHACTR4 phosphatase and actin regulator 4 involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr 6:85,411,993...85,529,441
Ensembl chr 6:85,412,134...85,528,715 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:129,797,438...129,800,568
Ensembl chr 3:129,798,854...129,800,197 		JBrowse link
cone retinal bipolar cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BBS10 Bardet-Biedl syndrome 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:36125046) MGI
Ensembl		 PMID:36125046 GO_REF:0000107 NCBI chr 5:39,557,716...39,566,350
Ensembl chr 5:39,557,715...39,566,323 		JBrowse link
G GNAT2 G protein subunit alpha transducin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23580486)
(PMID:29518352)		 Ensembl
MGI		 PMID:23580486 PMID:29518352 GO_REF:0000107 NCBI chr 4:110,512,349...110,523,222
Ensembl chr 4:110,498,707...110,524,072 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr12:20,271,351...20,279,777 JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9071226) Ensembl
MGI		 PMID:9071226 GO_REF:0000107 NCBI chr  X:39,208,115...39,235,879
Ensembl chr  X:39,208,119...39,235,758 		JBrowse link
cornea development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27687499) MGI
Ensembl		 PMID:27687499 GO_REF:0000107 NCBI chr13:46,033,753...46,209,238
Ensembl chr13:46,034,833...46,207,006 		JBrowse link
G FOXE3 forkhead box E3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:164,130,638...164,133,218
Ensembl chr 6:164,132,034...164,133,011 		JBrowse link
G KERA keratocan involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10802664) Ensembl
MGI		 PMID:10802664 GO_REF:0000107 NCBI chr 5:91,794,317...91,802,362
Ensembl chr 5:91,796,324...91,802,468 		JBrowse link
G KRT12 keratin 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8977471) Ensembl
MGI		 PMID:8977471 GO_REF:0000107 NCBI chr12:21,600,163...21,607,268
Ensembl chr12:21,599,563...21,606,912 		JBrowse link
G LIMK2 LIM domain kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26234751) Ensembl
MGI		 PMID:26234751 GO_REF:0000107 NCBI chr14:47,983,984...48,039,631
Ensembl chr14:47,983,975...48,040,821 		JBrowse link
G PAX6 paired box 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,978,287...29,001,200 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,707,026...73,826,529
Ensembl chr 5:73,707,050...73,826,430 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:129,797,438...129,800,568
Ensembl chr 3:129,798,854...129,800,197 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:16186342) MGI PMID:16186342 NCBI chr 7:7,221,654...7,244,626
Ensembl chr 7:7,221,656...7,244,612 		JBrowse link
G TWIST2 twist family bHLH transcription factor 2 acts_upstream_of_or_within ISO (PMID:20574024) MGI PMID:20574024 NCBI chr15:138,228,640...138,276,341
Ensembl chr15:138,228,807...138,229,289 		JBrowse link
embryonic camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17184764) Ensembl
MGI		 PMID:17184764 GO_REF:0000107 NCBI chr 1:113,932,722...114,037,059
Ensembl chr 1:113,932,739...114,037,046 		JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17184764) Ensembl
MGI		 PMID:17184764 GO_REF:0000107 NCBI chr 1:139,451,080...139,491,514
Ensembl chr 1:139,451,049...139,491,511 		JBrowse link
G CDK20 cyclin dependent kinase 20 acts_upstream_of_or_within ISO (PMID:28817564) MGI PMID:28817564 NCBI chr14:15,582...24,102 JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15958512) Ensembl
MGI		 PMID:15958512 GO_REF:0000107 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,470...28,777,509 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18791178) Ensembl
MGI		 PMID:18791178 GO_REF:0000107 NCBI chr15:110,913,990...110,921,388
Ensembl chr15:110,914,009...110,921,353 		JBrowse link
G IFT140 intraflagellar transport 140 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23469164) Ensembl
MGI		 PMID:23469164 GO_REF:0000107 NCBI chr 3:40,309,298...40,372,139
Ensembl chr 3:40,309,635...40,372,135 		JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (PMID:10572050)
(PMID:10498698)		 MGI PMID:10498698 PMID:10572050 NCBI chr 8:111,697,364...111,723,295
Ensembl chr 8:111,698,757...111,723,298 		JBrowse link
G PPP1R13L protein phosphatase 1 regulatory subunit 13 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15661756) Ensembl
MGI		 PMID:15661756 GO_REF:0000107 NCBI chr 6:51,763,214...51,779,902
Ensembl chr 6:51,763,227...51,781,058 		JBrowse link
G RARA retinoic acid receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7607067) Ensembl
MGI		 PMID:7607067 GO_REF:0000107 NCBI chr12:22,047,449...22,085,759
Ensembl chr12:22,047,443...22,085,673 		JBrowse link
G RARG retinoic acid receptor gamma involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7607067) Ensembl
MGI		 PMID:7607067 GO_REF:0000107 NCBI chr 5:18,436,267...18,458,625
Ensembl chr 5:18,436,270...18,458,624 		JBrowse link
G RDH10 retinol dehydrogenase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17473173) Ensembl
MGI		 PMID:17473173 GO_REF:0000107 NCBI chr 4:62,569,877...62,600,981
Ensembl chr 4:62,569,885...62,601,439 		JBrowse link
G TRAF3IP1 TRAF3 interacting protein 1 acts_upstream_of_or_within ISO (PMID:21945076) MGI PMID:21945076 NCBI chr15:137,863,612...137,912,325
Ensembl chr15:137,863,609...137,912,477 		JBrowse link
G TULP3 TUB like protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19286674) Ensembl
MGI		 PMID:19286674 GO_REF:0000107 NCBI chr 5:67,201,680...67,238,348
Ensembl chr 5:67,199,448...67,238,322 		JBrowse link
G WDR19 WD repeat domain 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22228095) Ensembl
MGI		 PMID:22228095 GO_REF:0000107 NCBI chr 8:30,453,969...30,553,699
Ensembl chr 8:30,463,862...30,553,703 		JBrowse link
embryonic camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:59,317,930...59,347,274
Ensembl chr 7:59,318,011...59,347,266 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:88,286,911...88,290,131
Ensembl chr 9:88,289,407...88,290,015 		JBrowse link
embryonic camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10049573) Ensembl
MGI		 PMID:10049573 GO_REF:0000107 NCBI chr17:57,567,770...57,676,516
Ensembl chr17:57,584,956...57,675,986 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18653562) Ensembl
MGI		 PMID:18653562 GO_REF:0000107 NCBI chr 1:25,155,652...25,158,517
Ensembl chr 1:25,155,664...25,160,279 		JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within ISO (PMID:18056999) MGI PMID:18056999 NCBI chr13:206,293,877...206,297,050
Ensembl chr13:206,293,849...206,297,015 		JBrowse link
G FOXF2 forkhead box F2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:715,001...719,781
Ensembl chr 7:715,001...720,104 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:110,913,990...110,921,388
Ensembl chr15:110,914,009...110,921,353 		JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:106,570,950...106,627,114
Ensembl chr 4:106,572,755...106,627,418 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:9,940,535...10,141,815
Ensembl chr18:9,861,792...10,135,065 		JBrowse link
G IFT122 intraflagellar transport 122 acts_upstream_of_or_within ISO (PMID:28778798) MGI PMID:28778798 NCBI chr13:68,828,710...68,902,062
Ensembl chr13:68,828,719...68,902,060 		JBrowse link
G IFT172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28778798) Ensembl
MGI		 PMID:28778798 GO_REF:0000107 NCBI chr 3:111,683,674...111,718,504
Ensembl chr 3:111,683,669...111,718,970 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18582859) Ensembl
MGI		 PMID:18582859 GO_REF:0000107 NCBI chr15:121,083,750...121,090,548
Ensembl chr15:121,083,753...121,090,121 		JBrowse link
G KDM2B lysine demethylase 2B involved_in ISO (PMID:21220025) BHF-UCL PMID:21220025 NCBI chr14:31,057,121...31,203,093
Ensembl chr14:31,165,950...31,203,091 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19653321)
(PMID:18985738)		 MGI PMID:18985738 PMID:19653321 NCBI chr 5:60,149,041...60,318,719
Ensembl chr 5:60,149,028...60,314,662 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18653562) Ensembl
MGI		 PMID:18653562 GO_REF:0000107 NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,978,287...29,001,200 		JBrowse link
G SP1 Sp1 transcription factor acts_upstream_of_or_within ISO (PMID:17584888) MGI PMID:17584888 NCBI chr 5:18,588,763...18,633,177
Ensembl chr 5:18,588,758...18,630,089 		JBrowse link
G SP3 Sp3 transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17584888) Ensembl
MGI		 PMID:17584888 GO_REF:0000107 NCBI chr15:79,935,986...79,990,139
Ensembl chr15:79,935,994...80,025,850 		JBrowse link
G TBX2 T-box transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:36,878,662...36,887,513
Ensembl chr12:36,878,675...36,887,513 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:9811866) MGI PMID:9811866 NCBI chr 7:7,221,654...7,244,626
Ensembl chr 7:7,221,656...7,244,612 		JBrowse link
G TH tyrosine hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:1,499,628...1,506,180
Ensembl chr 2:1,499,620...1,506,170 		JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18436818) Ensembl
MGI		 PMID:18436818 GO_REF:0000107 NCBI chr10:42,013,114...42,216,139
Ensembl chr10:42,013,084...42,214,205 		JBrowse link
embryonic retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDON cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19754878) Ensembl
MGI		 PMID:19754878 GO_REF:0000107 NCBI chr 9:53,079,543...53,178,881
Ensembl chr 9:53,079,550...53,178,881 		JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:106,570,950...106,627,114
Ensembl chr 4:106,572,755...106,627,418 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:9,940,535...10,141,815
Ensembl chr18:9,861,792...10,135,065 		JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19653321) MGI PMID:19653321 NCBI chr 5:60,149,041...60,318,719
Ensembl chr 5:60,149,028...60,314,662 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:129,527,704...129,583,693
Ensembl chr 9:129,532,184...129,580,982 		JBrowse link
G RBP4 retinol binding protein 4 involved_in ISO (PMID:10469643) BHF-UCL PMID:10469643 NCBI chr14:105,037,360...105,044,552
Ensembl chr14:105,037,464...105,044,765 		JBrowse link
establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAT1 FAT atypical cadherin 1 involved_in ISO (PMID:26114487) MGI PMID:26114487 NCBI chr17:8,466,099...8,580,715
Ensembl chr17:8,457,187...8,580,715 		JBrowse link
extraocular skeletal muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1S calcium voltage-gated channel subunit alpha1 S involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14618389) Ensembl
MGI		 PMID:14618389 GO_REF:0000107 NCBI chr10:23,503,701...23,567,797
Ensembl chr10:23,502,898...23,568,058 		JBrowse link
G FOXL2 forkhead box L2 involved_in ISS UniProt GO_REF:0000024 NCBI chr13:79,708,693...79,709,825
Ensembl chr13:79,708,693...79,709,825 		JBrowse link
G MYH15 myosin heavy chain 15 ISO RGD PMID:19948655 RGD:2317122 NCBI chr13:151,008,571...151,156,933
Ensembl chr13:150,981,827...151,155,145 		JBrowse link
G MYOM1 myomesin 1 ISO RGD PMID:12878677 RGD:633368 NCBI chr 6:103,451,206...103,593,093
Ensembl chr 6:103,451,343...103,597,297 		JBrowse link
G MYOM2 myomesin 2 ISO RGD PMID:12878677 RGD:633368 NCBI chr15:33,529,559...33,606,928
Ensembl chr15:33,510,929...33,606,922 		JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (PMID:16638982)
(PMID:21035439)		 MGI PMID:16638982 PMID:21035439 NCBI chr 8:111,697,364...111,723,295
Ensembl chr 8:111,698,757...111,723,298 		JBrowse link
eyelid development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGFR epidermal growth factor receptor acts_upstream_of_or_within ISO (PMID:9030684) MGI PMID:9030684 NCBI chr 9:139,302,410...139,474,632
Ensembl chr 9:139,300,022...139,475,589 		JBrowse link
G GRHL3 grainyhead like transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21262862) Ensembl
MGI		 PMID:21262862 GO_REF:0000107 NCBI chr 6:82,014,022...82,050,240
Ensembl chr 6:82,013,969...82,050,236 		JBrowse link
G HDAC1 histone deacetylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:88,749,611...88,785,220
Ensembl chr 6:88,749,634...88,785,411 		JBrowse link
G HDAC2 histone deacetylase 2 involved_in ISO (PMID:21093383) BHF-UCL PMID:21093383 NCBI chr 1:79,867,713...79,901,597
Ensembl chr 1:79,863,094...79,901,585 		JBrowse link
G INHBA inhibin subunit beta A involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:53,115,379...53,117,128
NCBI chr18:52,889,684...52,909,260
Ensembl chr18:52,889,684...52,900,967 		JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:25224220) MGI PMID:25224220 NCBI chr 6:153,686,425...153,687,635
Ensembl chr 6:153,685,682...153,687,636 		JBrowse link
G KMT2C lysine methyltransferase 2C acts_upstream_of_or_within ISO (PMID:17021013) MGI PMID:17021013 NCBI chr18:4,993,213...5,279,668
Ensembl chr18:4,993,227...5,278,723 		JBrowse link
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 acts_upstream_of_or_within ISO (PMID:23201579), (PMID:25224220) MGI PMID:23201579 PMID:25224220 NCBI chr16:35,872,301...35,947,097
Ensembl chr16:35,872,131...35,946,987 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:37,890,200...37,897,935
Ensembl chr 4:37,890,203...37,897,929 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,707,026...73,826,529
Ensembl chr 5:73,707,050...73,826,430 		JBrowse link
G SOS1 SOS Ras/Rac guanine nucleotide exchange factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9030684) Ensembl
MGI		 PMID:9030684 GO_REF:0000107 NCBI chr 3:101,209,568...101,366,057
Ensembl chr 3:101,209,641...101,362,723 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:129,797,438...129,800,568
Ensembl chr 3:129,798,854...129,800,197 		JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20047077) Ensembl
MGI		 PMID:20047077 GO_REF:0000107 NCBI chr 7:38,213,300...38,223,686
Ensembl chr 7:38,213,487...38,222,144 		JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:59,317,930...59,347,274
Ensembl chr 7:59,318,011...59,347,266 		JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:7,221,654...7,244,626
Ensembl chr 7:7,221,656...7,244,612 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:88,286,911...88,290,131
Ensembl chr 9:88,289,407...88,290,015 		JBrowse link
hyaloid vascular plexus regression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DRD2 dopamine receptor D2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:41,068,618...41,135,262
Ensembl chr 9:41,068,779...41,133,599 		JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 involved_in ISO (PMID:30936473) UniProt PMID:30936473 NCBI chr11:5,620,698...5,797,095
Ensembl chr11:5,621,212...5,795,264 		JBrowse link
G NINJ1 ninjurin 1 acts_upstream_of_or_within ISO (PMID:19557008) MGI PMID:19557008 NCBI chr 3:42,654,536...42,672,830
Ensembl chr 3:42,654,228...42,672,778 		JBrowse link
G OPN4 opsin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:87,645,563...87,660,820
Ensembl chr14:87,647,238...87,658,815 		JBrowse link
G OPN5 opsin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:42,476,125...42,507,181
Ensembl chr 7:42,476,125...42,527,121 		JBrowse link
G SLC17A6 solute carrier family 17 member 6 involved_in ISO (PMID:30936473) UniProt PMID:30936473 NCBI chr 2:37,098,983...37,138,935
Ensembl chr 2:37,098,992...37,138,475 		JBrowse link
G SLC6A3 solute carrier family 6 member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:79,186,114...79,220,302
Ensembl chr16:79,186,108...79,220,297 		JBrowse link
G TH tyrosine hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:1,499,628...1,506,180
Ensembl chr 2:1,499,620...1,506,170 		JBrowse link
iris morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXE3 forkhead box E3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:164,130,638...164,133,218
Ensembl chr 6:164,132,034...164,133,011 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22627278) Ensembl
MGI		 PMID:22627278 GO_REF:0000107 NCBI chr 1:190,625,436...190,673,926
Ensembl chr 1:190,625,244...190,674,845 		JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:106,570,950...106,627,114
Ensembl chr 4:106,572,755...106,627,418 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:9,940,535...10,141,815
Ensembl chr18:9,861,792...10,135,065 		JBrowse link
G PAX6 paired box 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,978,287...29,001,200 		JBrowse link
G PITX2 paired like homeodomain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:111,697,364...111,723,295
Ensembl chr 8:111,698,757...111,723,298 		JBrowse link
G VHL von Hippel-Lindau tumor suppressor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22627278) Ensembl
MGI		 PMID:22627278 GO_REF:0000107 NCBI chr13:66,334,535...66,342,401
Ensembl chr13:66,334,591...66,342,654 		JBrowse link
lens development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27687499) MGI
Ensembl		 PMID:27687499 GO_REF:0000107 NCBI chr13:46,033,753...46,209,238
Ensembl chr13:46,034,833...46,207,006 		JBrowse link
G BIRC7 baculoviral IAP repeat containing 7 acts_upstream_of_or_within ISO (PMID:26218911) MGI PMID:26218911 NCBI chr17:62,351,663...62,356,220 JBrowse link
G CASP6 caspase 6 ISO RGD PMID:15161922 RGD:2301319 NCBI chr 8:112,519,450...112,534,315
Ensembl chr 8:112,520,629...112,537,045 		JBrowse link
G CDK2 cyclin dependent kinase 2 ISO RGD PMID:10620399 RGD:724665 NCBI chr 5:21,365,723...21,372,170
Ensembl chr 5:21,365,764...21,372,168 		JBrowse link
G CDK4 cyclin dependent kinase 4 ISO RGD PMID:10620399 RGD:724665 NCBI chr 5:23,039,206...23,041,959
Ensembl chr 5:23,038,891...23,042,061 		JBrowse link
G CDON cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19754878) Ensembl
MGI		 PMID:19754878 GO_REF:0000107 NCBI chr 9:53,079,543...53,178,881
Ensembl chr 9:53,079,550...53,178,881 		JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:11687536)
(PMID:16439475)
(PMID:16439475), (PMID:9023351)		 RGD
MGI
GO_Central		 PMID:8187157 PMID:9023351 PMID:11687536 PMID:16439475 GO_REF:0000033 RGD:1600991 NCBI chr13:206,293,877...206,297,050
Ensembl chr13:206,293,849...206,297,015 		JBrowse link
G CRYAB crystallin alpha B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16439475) Ensembl
MGI		 PMID:16439475 GO_REF:0000107 NCBI chr 9:39,638,505...39,643,530
Ensembl chr 9:39,638,506...39,643,530 		JBrowse link
G CRYBA1 crystallin beta A1 involved_in ISO
IBA		 RGD
GO_Central		 PMID:2753045 GO_REF:0000033 RGD:1298814 NCBI chr12:45,466,051...45,473,110
Ensembl chr12:45,466,520...45,473,092 		JBrowse link
G CRYBA2 crystallin beta A2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:21212184) Ensembl
MGI
GO_Central		 PMID:21212184 GO_REF:0000033 GO_REF:0000107 NCBI chr15:121,013,611...121,016,869
Ensembl chr15:121,013,626...121,020,454 		JBrowse link
G CRYBA4 crystallin beta A4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:44,212,690...44,219,163
Ensembl chr14:44,194,592...44,219,163 		JBrowse link
G CRYBB1 crystallin beta B1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:44,194,268...44,206,057
Ensembl chr14:44,194,199...44,208,154 		JBrowse link
G CRYBB2 crystallin beta B2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:43,206,138...43,220,833
Ensembl chr14:43,209,311...43,220,837 		JBrowse link
G CRYBB3 crystallin beta B3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:43,191,007...43,199,631
Ensembl chr14:43,193,060...43,199,626 		JBrowse link
G CRYBG3 crystallin beta-gamma domain containing 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:162,354,343...162,478,771
Ensembl chr13:162,355,472...162,478,720 		JBrowse link
G CRYGN crystallin gamma N involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:5,840,024...5,848,163
Ensembl chr18:5,839,825...5,849,914 		JBrowse link
G CRYGS crystallin gamma S involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:6877261), (PMID:8034315) Ensembl
GO_Central
MGI		 PMID:6877261 PMID:8034315 GO_REF:0000033 GO_REF:0000107 NCBI chr13:124,356,702...124,364,673
Ensembl chr13:124,356,509...124,358,663 		JBrowse link
G CTNS cystinosin, lysosomal cystine transporter involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21897743) Ensembl
MGI		 PMID:21897743 GO_REF:0000107 NCBI chr12:49,730,741...49,754,362
Ensembl chr12:49,730,955...49,753,043 		JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14645510) Ensembl
MGI		 PMID:14645510 GO_REF:0000107 NCBI chr13:132,819,931...133,084,880
Ensembl chr13:132,820,870...133,086,841 		JBrowse link
G FAT1 FAT atypical cadherin 1 involved_in ISO (PMID:26114487) MGI PMID:26114487 NCBI chr17:8,466,099...8,580,715
Ensembl chr17:8,457,187...8,580,715 		JBrowse link
G FOXE3 forkhead box E3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:164,130,638...164,133,218
Ensembl chr 6:164,132,034...164,133,011 		JBrowse link
G FRS2 fibroblast growth factor receptor substrate 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23136392) Ensembl
MGI		 PMID:23136392 GO_REF:0000107 NCBI chr 5:33,725,432...33,852,952
Ensembl chr 5:33,725,444...33,849,953 		JBrowse link
G GATA3 GATA binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19623612) Ensembl
MGI		 PMID:19623612 GO_REF:0000107 NCBI chr10:63,367,684...63,397,977
Ensembl chr10:63,367,663...63,388,859 		JBrowse link
G GJA1 gap junction protein alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9620080) Ensembl
MGI		 PMID:9620080 GO_REF:0000107 NCBI chr 1:40,988,818...41,002,129
Ensembl chr 1:40,988,528...41,002,156 		JBrowse link
G GJA8 gap junction protein alpha 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:6877261) Ensembl
MGI		 PMID:6877261 GO_REF:0000107 NCBI chr 4:99,721,754...99,724,943
Ensembl chr 4:99,723,341...99,724,672 		JBrowse link
G GJE1 gap junction protein epsilon 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18385072) Ensembl
MGI		 PMID:18385072 GO_REF:0000107 NCBI chr 1:22,933,885...22,936,167
Ensembl chr 1:22,933,885...22,935,121 		JBrowse link
G LIM2 lens intrinsic membrane protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:6510713), (PMID:6877261), (PMID:7088001), (PMID:8812411) Ensembl
MGI		 PMID:6510713 PMID:6877261 PMID:7088001 PMID:8812411 GO_REF:0000107 NCBI chr 6:58,482,690...58,489,711
Ensembl chr 6:58,481,686...58,489,279 		JBrowse link
G LOC100154892 gamma-crystallin F acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:6510713), (PMID:6877261)
(PMID:7088001), (PMID:8034315)		 RGD
MGI
GO_Central		 PMID:2338125 PMID:6510713 PMID:6877261 PMID:7088001 PMID:8034315 GO_REF:0000033 RGD:2303725 NCBI chr15:111,231,561...111,233,938 JBrowse link
G LOC100156107 gamma-crystallin B acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:12426373), (PMID:8626090)
(PMID:18172107)		 RGD
MGI
GO_Central		 PMID:2338125 PMID:8626090 PMID:12426373 PMID:18172107 GO_REF:0000033 RGD:2303725 NCBI chr15:111,267,071...111,268,898 JBrowse link
G LOC100519628 gamma-crystallin D acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:17652744)
(PMID:10704279)		 RGD
MGI
GO_Central		 PMID:2338125 PMID:10704279 PMID:17652744 GO_REF:0000033 RGD:2303725 NCBI chr15:111,242,765...111,244,738
Ensembl chr15:111,242,765...111,244,775 		JBrowse link
G LOC100522220 gamma-crystallin F involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:111,956,789...111,959,051 JBrowse link
G LOC110257071 gamma-crystallin C-like involved_in ISO
IBA		 RGD
GO_Central		 PMID:2338125 GO_REF:0000033 RGD:2303725 NCBI chr15:111,256,707...111,258,291
Ensembl chr15:111,256,725...111,258,277 		JBrowse link
G MAF MAF bZIP transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10603348)
(PMID:10383433)
(PMID:12835653)		 Ensembl
MGI		 PMID:10383433 PMID:10603348 PMID:12835653 GO_REF:0000107 NCBI chr 6:8,468,736...8,910,012
Ensembl chr 6:8,468,782...8,485,030 		JBrowse link
G MED1 mediator complex subunit 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:22,830,405...22,872,420
Ensembl chr12:22,841,205...22,872,409 		JBrowse link
G MIP major intrinsic protein of lens fiber involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7333462) Ensembl
MGI		 PMID:7333462 GO_REF:0000107 NCBI chr 5:21,789,040...21,804,964
Ensembl chr 5:21,787,826...21,793,592 		JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15716406) Ensembl
MGI		 PMID:15716406 GO_REF:0000107 NCBI chr  X:39,208,115...39,235,879
Ensembl chr  X:39,208,119...39,235,758 		JBrowse link
G NHS NHS actin remodeling regulator involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:8282045) Ensembl
GO_Central
MGI		 PMID:8282045 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:13,854,950...14,209,085
Ensembl chr  X:14,097,006...14,206,568 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:6877261) Ensembl
MGI		 PMID:6877261 GO_REF:0000107 NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,978,287...29,001,200 		JBrowse link
G PDS5A PDS5 cohesin associated factor A acts_upstream_of_or_within ISO (PMID:19412548) MGI PMID:19412548 NCBI chr 8:30,988,366...31,134,331
Ensembl chr 8:30,988,370...31,134,331 		JBrowse link
G PDS5B PDS5 cohesin associated factor B acts_upstream_of_or_within ISO (PMID:19412548) MGI PMID:19412548 NCBI chr11:9,014,694...9,223,035
Ensembl chr11:9,014,755...9,223,031 		JBrowse link
G PITX3 paired like homeodomain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:113,230,194...113,241,393
Ensembl chr14:113,230,965...113,241,360 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:129,527,704...129,583,693
Ensembl chr 9:129,532,184...129,580,982 		JBrowse link
G SIX3 SIX homeobox 3 involved_in ISO (PMID:11139622) UniProt PMID:11139622 NCBI chr 3:95,521,330...95,527,004
Ensembl chr 3:95,521,334...95,525,436 		JBrowse link
G SIX5 SIX homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10802668)
(PMID:10802667)		 Ensembl
MGI		 PMID:10802667 PMID:10802668 GO_REF:0000107 NCBI chr 6:52,095,332...52,099,458
Ensembl chr 6:52,095,334...52,099,571 		JBrowse link
G SLITRK6 SLIT and NTRK like family member 6 acts_upstream_of_or_within ISO (PMID:23543054) MGI PMID:23543054 NCBI chr11:56,508,713...56,522,270
Ensembl chr11:56,508,767...56,522,197 		JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24239381) Ensembl
MGI		 PMID:24239381 GO_REF:0000107 NCBI chr17:34,760,379...34,778,301
Ensembl chr17:34,760,347...34,779,701 		JBrowse link
G TBC1D32 TBC1 domain family member 32 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20159594) Ensembl
MGI		 PMID:20159594 GO_REF:0000107 NCBI chr 1:41,057,782...41,265,416
Ensembl chr 1:41,057,838...41,265,375 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11641223) Ensembl
MGI		 PMID:11641223 GO_REF:0000107 NCBI chr 1:240,842,735...240,918,267
Ensembl chr 1:240,860,156...240,918,528 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11641223) Ensembl
MGI		 PMID:11641223 GO_REF:0000107 NCBI chr13:16,784,370...16,875,828
Ensembl chr13:16,784,490...16,878,160 		JBrowse link
lens fiber cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BFSP1 beaded filament structural protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15037121) Ensembl
MGI
GO_Central		 PMID:15037121 GO_REF:0000033 GO_REF:0000107 NCBI chr17:25,933,743...25,966,940
Ensembl chr17:25,933,900...25,967,005 		JBrowse link
G BFSP2 beaded filament structural protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15037121), (PMID:17065509) Ensembl
MGI		 PMID:15037121 PMID:17065509 GO_REF:0000107 NCBI chr13:74,557,878...74,639,459
Ensembl chr13:74,558,297...74,639,455 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:18455718)
(PMID:23136392)		 MGI PMID:18455718 PMID:23136392 NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,713...131,289,425 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:18455718) MGI PMID:18455718 NCBI chr 8:879,151...894,968
Ensembl chr 8:879,159...894,964 		JBrowse link
G FRS2 fibroblast growth factor receptor substrate 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23136392) Ensembl
MGI		 PMID:23136392 GO_REF:0000107 NCBI chr 5:33,725,432...33,852,952
Ensembl chr 5:33,725,444...33,849,953 		JBrowse link
G LOC100156107 gamma-crystallin B acts_upstream_of_or_within ISO (PMID:18172107) MGI PMID:18172107 NCBI chr15:111,267,071...111,268,898 JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:239,375,150...239,468,387
Ensembl chr 1:239,396,097...239,467,758 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (PMID:21118511) MGI PMID:21118511 NCBI chr 2:69,717,175...69,810,301
Ensembl chr 2:69,662,238...69,810,295 		JBrowse link
G VIM vimentin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15037121) Ensembl
MGI		 PMID:15037121 GO_REF:0000107 NCBI chr10:43,516,441...43,526,172
Ensembl chr10:43,517,307...43,526,170 		JBrowse link
lens fiber cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZR1 fizzy and cell division cycle 20 related 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17215516) Ensembl
MGI		 PMID:17215516 GO_REF:0000107 NCBI chr 2:75,122,599...75,164,134
Ensembl chr 2:75,121,835...75,146,835 		JBrowse link
G KDM5B lysine demethylase 5B ISO RGD PMID:24142921 RGD:9587771 NCBI chr10:24,739,115...24,831,537
Ensembl chr10:24,736,838...24,831,447 		JBrowse link
G LOC100519628 gamma-crystallin D acts_upstream_of_or_within ISO (PMID:17652744) RGD
MGI		 PMID:8575616 PMID:17652744 RGD:1601018 NCBI chr15:111,242,765...111,244,738
Ensembl chr15:111,242,765...111,244,775 		JBrowse link
G MAF MAF bZIP transcription factor involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:10383433)
(PMID:12835653)		 Ensembl
GO_Central
MGI		 PMID:10383433 PMID:12835653 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:8,468,736...8,910,012
Ensembl chr 6:8,468,782...8,485,030 		JBrowse link
G NF2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:46,653,869...46,726,421
Ensembl chr14:46,653,900...46,731,999 		JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:23136392) MGI PMID:23136392 NCBI chr 1:191,535,262...191,941,675
Ensembl chr 1:191,535,301...191,925,327 		JBrowse link
G PITX3 paired like homeodomain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:113,230,194...113,241,393
Ensembl chr14:113,230,965...113,241,360 		JBrowse link
G PLAAT3 phospholipase A and acyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:8,410,540...8,444,604
Ensembl chr 2:8,413,388...8,444,595 		JBrowse link
G SIX3 SIX homeobox 3 involved_in ISO (PMID:12072567) UniProt PMID:12072567 NCBI chr 3:95,521,330...95,527,004
Ensembl chr 3:95,521,334...95,525,436 		JBrowse link
G SKIL SKI like proto-oncogene involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17215516) Ensembl
MGI		 PMID:17215516 GO_REF:0000107 NCBI chr13:109,029,831...109,059,176
Ensembl chr13:109,029,952...109,059,173 		JBrowse link
G SLC7A11 solute carrier family 7 member 11 ISO RGD PMID:16043861 RGD:2315033 NCBI chr 8:88,608,083...88,690,589
Ensembl chr 8:88,608,174...88,687,250 		JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17215516) Ensembl
MGI		 PMID:17215516 GO_REF:0000107 NCBI chr 1:164,998,457...165,124,455
Ensembl chr 1:164,998,103...165,124,449 		JBrowse link
G TDRD7 tudor domain containing 7 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:239,285,628...239,368,558
Ensembl chr 1:239,271,916...239,368,550 		JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17215516) MGI
Ensembl		 PMID:17215516 GO_REF:0000107 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046 		JBrowse link
lens fiber cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI2 abl interactor 2 involved_in ISO (PMID:15572692) UniProt PMID:15572692 NCBI chr15:106,776,627...106,903,889
Ensembl chr15:106,776,631...106,900,333 		JBrowse link
G ATF4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:8,742,964...8,745,752
Ensembl chr 5:8,742,967...8,745,368 		JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within ISO (PMID:18056999)
(PMID:16799046)		 MGI PMID:16799046 PMID:18056999 NCBI chr13:206,293,877...206,297,050
Ensembl chr13:206,293,849...206,297,015 		JBrowse link
G EPHA2 EPH receptor A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:75,251,465...75,279,364
Ensembl chr 6:75,251,467...75,279,314 		JBrowse link
G LOC100156107 gamma-crystallin B acts_upstream_of_or_within ISO (PMID:12426373), (PMID:8626090) MGI PMID:8626090 PMID:12426373 NCBI chr15:111,267,071...111,268,898 JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:129,527,704...129,583,693
Ensembl chr 9:129,532,184...129,580,982 		JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24239381) Ensembl
MGI		 PMID:24239381 GO_REF:0000107 NCBI chr17:34,760,379...34,778,301
Ensembl chr17:34,760,347...34,779,701 		JBrowse link
lens induction in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9851982) Ensembl
MGI		 PMID:9851982 GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:106,570,950...106,627,114
Ensembl chr 4:106,572,755...106,627,418 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:9,940,535...10,141,815
Ensembl chr18:9,861,792...10,135,065 		JBrowse link
G POU2F1 POU class 2 homeobox 1 acts_upstream_of_or_within ISO (PMID:17140559) MGI PMID:17140559 NCBI chr 4:83,592,051...83,776,465
Ensembl chr 4:83,596,269...83,776,430 		JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within ISO (PMID:17066077) MGI PMID:17066077 NCBI chr 3:95,521,330...95,527,004
Ensembl chr 3:95,521,334...95,525,436 		JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:17140559) MGI PMID:17140559 NCBI chr13:119,668,476...119,669,435
Ensembl chr13:119,668,476...119,669,435 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:10571739) MGI PMID:10571739 NCBI chr 7:7,221,654...7,244,626
Ensembl chr 7:7,221,656...7,244,612 		JBrowse link
lens morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAR3 BCAR3 adaptor protein, NSP family member involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19365570) Ensembl
MGI		 PMID:19365570 GO_REF:0000107 NCBI chr 4:123,440,571...123,666,603
Ensembl chr 4:123,440,571...123,666,598 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18653562) Ensembl
MGI		 PMID:18653562 GO_REF:0000107 NCBI chr 1:25,155,652...25,158,517
Ensembl chr 1:25,155,664...25,160,279 		JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within ISO (PMID:16799046)
(PMID:8812430)		 MGI PMID:8812430 PMID:16799046 NCBI chr13:206,293,877...206,297,050
Ensembl chr13:206,293,849...206,297,015 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16102745) Ensembl
MGI		 PMID:16102745 GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,164,277...25,208,311 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:11290300) MGI PMID:11290300 NCBI chr 8:879,151...894,968
Ensembl chr 8:879,159...894,964 		JBrowse link
G LCTL lactase like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:164,526,477...164,540,177
Ensembl chr 1:164,526,502...164,540,118 		JBrowse link
G MEIS1 Meis homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14713950) Ensembl
MGI		 PMID:14713950 GO_REF:0000107 NCBI chr 3:75,485,024...75,625,855
Ensembl chr 3:75,485,022...75,625,040 		JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728677) Ensembl
MGI		 PMID:15728677 GO_REF:0000107 NCBI chr 9:46,823,552...46,891,564
Ensembl chr 9:46,789,726...46,891,304 		JBrowse link
G NECTIN3 nectin cell adhesion molecule 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728677) Ensembl
MGI		 PMID:15728677 GO_REF:0000107 NCBI chr13:148,448,581...148,578,920
Ensembl chr13:148,452,309...148,579,052 		JBrowse link
G PITX3 paired like homeodomain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:113,230,194...113,241,393
Ensembl chr14:113,230,965...113,241,360 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:129,527,704...129,583,693
Ensembl chr 9:129,532,184...129,580,982 		JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (PMID:17003410) MGI PMID:17003410 NCBI chr 6:64,188,265...64,242,596
Ensembl chr 6:64,188,236...64,242,560 		JBrowse link
G SOX1 SRY-box transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9512512) Ensembl
MGI		 PMID:9512512 GO_REF:0000107 NCBI chr11:77,985,771...77,989,383
Ensembl chr11:77,986,200...77,987,351 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:129,797,438...129,800,568
Ensembl chr 3:129,798,854...129,800,197 		JBrowse link
G TDRD7 tudor domain containing 7 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:239,285,628...239,368,558
Ensembl chr 1:239,271,916...239,368,550 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:18224708), (PMID:9918694) MGI PMID:9918694 PMID:18224708 NCBI chr 7:7,221,654...7,244,626
Ensembl chr 7:7,221,656...7,244,612 		JBrowse link
lens placode formation involved in camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FRS2 fibroblast growth factor receptor substrate 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15569927) Ensembl
MGI		 PMID:15569927 GO_REF:0000107 NCBI chr 5:33,725,432...33,852,952
Ensembl chr 5:33,725,444...33,849,953 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:129,527,704...129,583,693
Ensembl chr 9:129,532,184...129,580,982 		JBrowse link
negative regulation of amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASZ1 castor zinc finger 1 acts_upstream_of_or_within ISO (PMID:25654255) MGI PMID:25654255 NCBI chr 6:70,876,329...71,029,495
Ensembl chr 6:70,878,983...70,933,357 		JBrowse link
G GDF11 growth differentiation factor 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15976303) Ensembl
MGI		 PMID:15976303 GO_REF:0000107 NCBI chr 5:21,191,322...21,199,024
Ensembl chr 5:21,191,251...21,201,804 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16038893) Ensembl
MGI		 PMID:16038893 GO_REF:0000107 NCBI chr13:131,135,970...131,137,865
Ensembl chr13:131,135,725...131,138,237 		JBrowse link
G POU4F2 POU class 4 homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:82,044,443...82,046,377
Ensembl chr 8:82,043,643...82,047,675 		JBrowse link
negative regulation of lens fiber cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXE3 forkhead box E3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:164,130,638...164,133,218
Ensembl chr 6:164,132,034...164,133,011 		JBrowse link
G SPRED1 sprouty related EVH1 domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:132,903,103...133,016,725
Ensembl chr 1:132,902,304...133,015,742 		JBrowse link
G SPRED2 sprouty related EVH1 domain containing 2 involved_in ISO (PMID:29501879) UniProt PMID:29501879 NCBI chr 3:76,527,646...76,649,652
Ensembl chr 3:76,523,589...76,649,651 		JBrowse link
G SPRED3 sprouty related EVH1 domain containing 3 involved_in ISO (PMID:29501879) UniProt PMID:29501879 NCBI chr 6:47,302,211...47,312,034
Ensembl chr 6:47,298,634...47,310,181 		JBrowse link
G SPRY1 sprouty RTK signaling antagonist 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:100,449,476...100,863,780
Ensembl chr 8:100,450,266...100,863,446 		JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:52,153,695...52,158,766
Ensembl chr11:52,153,704...52,159,156 		JBrowse link
negative regulation of retinal cone cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASZ1 castor zinc finger 1 acts_upstream_of_or_within ISO (PMID:25654255) MGI PMID:25654255 NCBI chr 6:70,876,329...71,029,495
Ensembl chr 6:70,878,983...70,933,357 		JBrowse link
negative regulation of vasculature development involved in avascular cornea development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGPTL7 angiopoietin like 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,350,872...71,356,299
Ensembl chr 6:71,350,033...71,356,662 		JBrowse link
neural retina development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTL6A actin like 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:117,598,415...117,627,311
Ensembl chr13:117,598,496...117,628,488 		JBrowse link
G ATOH7 atonal bHLH transcription factor 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21441919) MGI
InterPro
Ensembl		 PMID:21441919 GO_REF:0000002 GO_REF:0000107 NCBI chr14:71,398,939...71,402,479
Ensembl chr14:71,400,980...71,401,447 		JBrowse link
G ATP2B1 ATPase plasma membrane Ca2+ transporting 1 ISO RGD PMID:16079002 RGD:2317729 NCBI chr 5:92,935,688...93,061,406
Ensembl chr 5:92,935,694...93,061,405 		JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 ISO RGD PMID:16079002 RGD:2317729 NCBI chr13:66,526,508...66,897,125
Ensembl chr13:66,528,323...66,897,128 		JBrowse link
G ATP2B3 ATPase plasma membrane Ca2+ transporting 3 ISO RGD PMID:16079002 RGD:2317729 NCBI chr  X:124,318,874...124,357,653
Ensembl chr  X:124,301,713...124,357,653 		JBrowse link
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 ISO RGD PMID:16079002 RGD:2317729 NCBI chr 9:64,336,354...64,445,669
Ensembl chr 9:64,336,499...64,445,663 		JBrowse link
G BSG basigin involved_in ISO (PMID:10967074), (PMID:11273674), (PMID:11853760) UniProt PMID:10967074 PMID:11273674 PMID:11853760 NCBI chr 2:77,735,586...77,743,451 JBrowse link
G CASP2 caspase 2 ISO RGD PMID:9809666 RGD:4107085 NCBI chr18:6,946,432...6,966,088
Ensembl chr18:6,941,937...6,966,061 		JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:20589906 RGD:405650605 NCBI chr 7:98,449,508...98,451,971
Ensembl chr 7:98,449,349...98,455,554 		JBrowse link
G GPM6A glycoprotein M6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:38,258,496...38,555,129
Ensembl chr15:38,259,244...38,305,603 		JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15716406) Ensembl
MGI		 PMID:15716406 GO_REF:0000107 NCBI chr  X:39,208,115...39,235,879
Ensembl chr  X:39,208,119...39,235,758 		JBrowse link
G OPTN optineurin ISO RGD PMID:17687037 RGD:7800681 NCBI chr10:48,532,029...48,582,952
Ensembl chr10:48,530,843...48,582,860 		JBrowse link
G PER1 period circadian regulator 1 ISO RGD PMID:20589906 RGD:405650605 NCBI chr12:53,361,863...53,376,723
Ensembl chr12:53,361,889...53,374,248 		JBrowse link
G PER2 period circadian regulator 2 ISO RGD PMID:20589906 RGD:405650605 NCBI chr15:137,793,419...137,837,854
Ensembl chr15:137,793,422...137,837,070 		JBrowse link
G PSEN1 presenilin 1 ISO RGD PMID:12401445 RGD:729595 NCBI chr 7:96,478,179...96,567,884
Ensembl chr 7:96,478,190...96,569,130 		JBrowse link
G RAB11FIP4 RAB11 family interacting protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:43,360,758...43,474,235
Ensembl chr12:43,364,140...43,474,241 		JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 ISO RGD PMID:2631392 RGD:9585660 NCBI chr 6:144,206,078...144,229,471
Ensembl chr 6:144,206,078...144,229,467 		JBrowse link
G SLC17A6 solute carrier family 17 member 6 ISO RGD PMID:18482716 RGD:9999162 NCBI chr 2:37,098,983...37,138,935
Ensembl chr 2:37,098,992...37,138,475 		JBrowse link
G SLC17A7 solute carrier family 17 member 7 ISO RGD PMID:18482716 RGD:9999162 NCBI chr 6:54,511,121...54,521,616
Ensembl chr 6:54,511,124...54,521,611 		JBrowse link
G SLC17A8 solute carrier family 17 member 8 ISO RGD PMID:18482716 RGD:9999162 NCBI chr 5:83,741,641...83,809,472
Ensembl chr 5:83,741,715...83,800,808 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:69,717,175...69,810,301
Ensembl chr 2:69,662,238...69,810,295 		JBrowse link
G SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:5,958,466...5,989,120
Ensembl chr18:5,958,506...5,989,114 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in ISO (PMID:9217007) BHF-UCL PMID:9217007 NCBI chr10:8,306,136...8,435,307
Ensembl chr10:8,305,539...8,390,341 		JBrowse link
optic cup formation involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID1A AT-rich interaction domain 1A acts_upstream_of_or_within ISO (PMID:23129809) MGI PMID:23129809 NCBI chr 6:84,049,729...84,124,302
Ensembl chr 6:84,049,087...84,123,349 		JBrowse link
optic cup morphogenesis involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (PMID:16611695) MGI PMID:16611695 NCBI chr 1:226,163,347...226,217,342
Ensembl chr 1:226,161,299...226,217,308 		JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16611695) Ensembl
MGI		 PMID:16611695 GO_REF:0000107 NCBI chr 1:139,451,080...139,491,514
Ensembl chr 1:139,451,049...139,491,511 		JBrowse link
G PAX2 paired box 2 involved_in ISO (PMID:8951055) DFLAT PMID:8951055 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,823,308...111,913,969 		JBrowse link
optic cup structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TFAP2A transcription factor AP-2 alpha involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:7,221,654...7,244,626
Ensembl chr 7:7,221,656...7,244,612 		JBrowse link
optic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX3 SIX homeobox 3 involved_in ISO (PMID:11458394) UniProt PMID:11458394 NCBI chr 3:95,521,330...95,527,004
Ensembl chr 3:95,521,334...95,525,436 		JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:7,221,654...7,244,626
Ensembl chr 7:7,221,656...7,244,612 		JBrowse link
positive regulation of amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLX1 distal-less homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:78,186,667...78,191,788
Ensembl chr15:78,185,790...78,191,226 		JBrowse link
G DLX2 distal-less homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:78,200,696...78,204,264
Ensembl chr15:78,200,916...78,204,112 		JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (PMID:18973577) MGI PMID:18973577 NCBI chr 6:103,226,395...103,234,591
Ensembl chr 6:103,226,402...103,234,610 		JBrowse link
G TGIF2 TGFB induced factor homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18926818) Ensembl
MGI		 PMID:18926818 GO_REF:0000107 NCBI chr17:39,840,649...39,858,162
Ensembl chr17:39,675,088...39,858,154 		JBrowse link
positive regulation of lens epithelial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXE3 forkhead box E3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:164,130,638...164,133,218
Ensembl chr 6:164,132,034...164,133,011 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:129,797,438...129,800,568
Ensembl chr 3:129,798,854...129,800,197 		JBrowse link
positive regulation of lens fiber cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF2 fibroblast growth factor 2 involved_in ISO (PMID:29501879) UniProt PMID:29501879 NCBI chr 8:101,278,877...101,344,084
Ensembl chr 8:101,278,885...101,343,916 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 involved_in ISO (PMID:16162653) UniProt PMID:16162653 NCBI chr15:7,498,879...7,631,347
Ensembl chr15:7,499,026...7,632,655 		JBrowse link
post-embryonic camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL11B BCL11 transcription factor B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12717433) Ensembl
MGI		 PMID:12717433 GO_REF:0000107 NCBI chr 7:120,205,008...120,295,737
Ensembl chr 7:120,205,008...120,295,936 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18791178) Ensembl
MGI		 PMID:18791178 GO_REF:0000107 NCBI chr15:110,913,990...110,921,388
Ensembl chr15:110,914,009...110,921,353 		JBrowse link
G KLF4 KLF transcription factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17060454) Ensembl
MGI		 PMID:17060454 GO_REF:0000107 NCBI chr 1:248,604,817...248,609,574
Ensembl chr 1:248,604,820...248,609,035 		JBrowse link
G MUC4 mucin 4, cell surface associated ISO RGD PMID:11120573 RGD:2303744 NCBI chr13:134,192,412...134,248,435 JBrowse link
G VEGFA vascular endothelial growth factor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10229225) Ensembl
MGI		 PMID:10229225 GO_REF:0000107 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,366 		JBrowse link
post-embryonic camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAK1 BCL2 antagonist/killer 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15955981) MGI
Ensembl		 PMID:15955981 GO_REF:0000107 NCBI chr 7:29,808,849...29,815,345
Ensembl chr 7:29,808,849...29,815,318 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15955981) Ensembl
MGI		 PMID:15955981 GO_REF:0000107 NCBI chr 6:54,222,341...54,228,150
Ensembl chr 6:54,222,336...54,228,147 		JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (PMID:22426483) MGI PMID:22426483 NCBI chr11:5,620,698...5,797,095
Ensembl chr11:5,621,212...5,795,264 		JBrowse link
G HMGN1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO (PMID:16466397) MGI PMID:16466397 NCBI chr13:202,936,313...202,943,496
Ensembl chr13:202,905,233...202,943,575 		JBrowse link
G KDR kinase insert domain receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22426483) Ensembl
MGI		 PMID:22426483 GO_REF:0000107 NCBI chr 8:41,809,116...41,856,379
Ensembl chr 8:41,809,122...41,856,336 		JBrowse link
G MIR23A microRNA mir-23a acts_upstream_of_or_within ISO (PMID:24101522) MGI PMID:24101522 NCBI chr 2:65,308,117...65,308,186
Ensembl chr 2:65,308,117...65,308,186 		JBrowse link
post-embryonic retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRB1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15316081), (PMID:16885194) Ensembl
MGI		 PMID:15316081 PMID:16885194 GO_REF:0000107 NCBI chr10:20,137,246...20,332,539
Ensembl chr10:20,137,451...20,332,414 		JBrowse link
G DSCAM DS cell adhesion molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18216855) Ensembl
MGI		 PMID:18216855 GO_REF:0000107 NCBI chr13:203,566,765...204,292,079
Ensembl chr13:203,567,129...204,313,820 		JBrowse link
G GRK1 G protein-coupled receptor kinase 1 acts_upstream_of_or_within ISO (PMID:10097103) MGI PMID:10097103 NCBI chr11:78,793,670...78,803,291
Ensembl chr11:78,793,777...78,804,262 		JBrowse link
regulation of lens fiber cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN1B cyclin dependent kinase inhibitor 1B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9784491) Ensembl
MGI		 PMID:9784491 GO_REF:0000107 NCBI chr 5:59,731,224...59,735,831
Ensembl chr 5:59,731,206...59,735,831 		JBrowse link
G CDKN1C cyclin dependent kinase inhibitor 1C acts_upstream_of_or_within ISO (PMID:9784491) MGI PMID:9784491 NCBI chr 2:2,019,391...2,022,092
Ensembl chr 2:2,019,830...2,021,853 		JBrowse link
regulation of neural retina development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL4 delta like canonical Notch ligand 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:130,376,720...130,386,411
Ensembl chr 1:130,376,721...130,386,411 		JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:51,817,697...51,820,147
Ensembl chr10:51,817,924...51,819,960 		JBrowse link
G SIX3 SIX homeobox 3 involved_in ISO (PMID:20890044) UniProt PMID:20890044 NCBI chr 3:95,521,330...95,527,004
Ensembl chr 3:95,521,334...95,525,436 		JBrowse link
regulation of retina development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELF4 CUGBP Elav-like family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23932931) Ensembl
MGI		 PMID:23932931 GO_REF:0000107 NCBI chr 6:121,065,604...121,381,052
Ensembl chr 6:121,066,772...121,381,028 		JBrowse link
retina development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACHE acetylcholinesterase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15579149) Ensembl
MGI		 PMID:15579149 GO_REF:0000107 NCBI chr 3:8,732,451...8,738,274
Ensembl chr 3:8,732,441...8,738,605 		JBrowse link
G ACTB actin beta ISO RGD PMID:22916200 RGD:9587758 NCBI chr 3:4,084,275...4,090,383
Ensembl chr 3:4,082,216...4,090,356 		JBrowse link
G AGTPBP1 ATP/GTP binding carboxypeptidase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24791901)
(PMID:21052544)		 Ensembl
MGI		 PMID:21052544 PMID:24791901 GO_REF:0000107 NCBI chr10:29,440,150...29,590,457
Ensembl chr10:29,440,145...29,590,454 		JBrowse link
G AHI1 Abelson helper integration site 1 acts_upstream_of_or_within ISO (PMID:20592197) MGI PMID:20592197 NCBI chr 1:28,566,279...28,760,471
Ensembl chr 1:28,566,397...28,760,467 		JBrowse link
G ALMS1 ALMS1 centrosome and basal body associated protein acts_upstream_of_or_within ISO (PMID:31302159) MGI PMID:31302159 NCBI chr 3:69,253,742...69,417,043
Ensembl chr 3:69,253,750...69,417,189 		JBrowse link
G APC APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (PMID:10982921) MGI PMID:10982921 NCBI chr 2:116,913,354...116,985,303
Ensembl chr 2:116,812,582...117,034,887 		JBrowse link
G ARSG arylsulfatase G acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:26975023) MGI
Ensembl		 PMID:26975023 GO_REF:0000107 NCBI chr12:11,751,930...11,882,844
Ensembl chr12:11,751,937...11,843,055 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9699561) Ensembl
MGI		 PMID:9699561 GO_REF:0000107 NCBI chr 6:54,222,341...54,228,150
Ensembl chr 6:54,222,336...54,228,147 		JBrowse link
G BBS1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31302159) MGI
Ensembl		 PMID:31302159 GO_REF:0000107 NCBI chr 2:5,886,989...5,906,468
Ensembl chr 2:5,886,990...5,906,388 		JBrowse link
G BBS10 Bardet-Biedl syndrome 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31302159), (PMID:36125046), (PMID:36700052) MGI
Ensembl		 PMID:31302159 PMID:36125046 PMID:36700052 GO_REF:0000107 NCBI chr 5:39,557,716...39,566,350
Ensembl chr 5:39,557,715...39,566,323 		JBrowse link
G BMP4 bone morphogenetic protein 4 ISO RGD PMID:17069773 RGD:2289001 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637 		JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12654290) Ensembl
MGI		 PMID:12654290 GO_REF:0000107 NCBI chr 8:124,536,648...125,035,841
Ensembl chr 8:124,536,653...124,759,406 		JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 ISO RGD PMID:10482474 RGD:5129487 NCBI chr15:105,971,577...106,132,496
Ensembl chr15:105,970,428...106,135,730 		JBrowse link
G C3 complement C3 acts_upstream_of_or_within ISO (PMID:28057640) MGI PMID:28057640 NCBI chr 2:72,431,470...72,471,622
Ensembl chr 2:72,431,212...72,472,228 		JBrowse link
G CACNA1F calcium voltage-gated channel subunit alpha1 F acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chr  X:43,250,449...43,284,458
Ensembl chr  X:43,251,370...43,283,990 		JBrowse link
G CALB1 calbindin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:46,701,276...46,723,548
Ensembl chr 4:46,701,045...46,725,197 		JBrowse link
G CEP290 centrosomal protein 290 acts_upstream_of_or_within ISO (PMID:21052544), (PMID:31302159) MGI PMID:21052544 PMID:31302159 NCBI chr 5:94,384,397...94,474,337
Ensembl chr 5:94,384,415...94,474,335 		JBrowse link
G CFD complement factor D acts_upstream_of_or_within ISO (PMID:28057640) MGI PMID:28057640 NCBI chr 2:77,509,792...77,511,988
Ensembl chr 2:77,509,795...77,511,974 		JBrowse link
G CFH complement factor H acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect		 ISO (PMID:17921253), (PMID:28057640)
(PMID:30705315)
(PMID:28057640)		 MGI PMID:17921253 PMID:28057640 PMID:30705315
G CHD7 chromodomain helicase DNA binding protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:72,572,455...72,754,443
Ensembl chr 4:72,573,453...72,694,146 		JBrowse link
G CLCN2 chloride voltage-gated channel 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr13:122,234,731...122,249,889
Ensembl chr13:122,234,736...122,249,867 		JBrowse link
G CLN8 CLN8 transmembrane ER and ERGIC protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15565184)
(PMID:21052544)		 Ensembl
MGI		 PMID:15565184 PMID:21052544 GO_REF:0000107 NCBI chr15:33,282,524...33,325,598
Ensembl chr15:33,288,301...33,304,631 		JBrowse link
G CNGA3 cyclic nucleotide gated channel subunit alpha 3 acts_upstream_of_or_within ISO (PMID:21124780) MGI PMID:21124780 NCBI chr 3:55,872,607...55,936,516
Ensembl chr 3:55,874,250...55,922,979 		JBrowse link
G CRB1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22447858), (PMID:25147295) Ensembl
MGI		 PMID:22447858 PMID:25147295 GO_REF:0000107 NCBI chr10:20,137,246...20,332,539
Ensembl chr10:20,137,451...20,332,414 		JBrowse link
G CRX cone-rod homeobox acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chr 6:53,506,410...53,509,858
Ensembl chr 6:53,506,410...53,512,190 		JBrowse link
G DCLK1 doublecortin like kinase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr11:11,815,258...12,159,085
Ensembl chr11:11,815,357...12,158,826 		JBrowse link
G DCLK2 doublecortin like kinase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:78,680,241...78,854,909
Ensembl chr 8:78,681,415...78,854,848 		JBrowse link
G DCX doublecortin involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:91,317,671...91,644,572
Ensembl chr  X:91,323,764...91,644,567 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:198,815...211,346
Ensembl chr 1:199,358...211,346 		JBrowse link
G DRAM2 DNA damage regulated autophagy modulator 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:37691820) MGI
Ensembl		 PMID:37691820 GO_REF:0000107 NCBI chr 4:109,183,389...109,205,735
Ensembl chr 4:109,183,345...109,204,960 		JBrowse link
G DRD4 dopamine receptor D4 ISO RGD PMID:18778704 RGD:7175073 NCBI chr 2:398,766...401,539
Ensembl chr 2:398,766...402,433 		JBrowse link
G DTNBP1 dystrobrevin binding protein 1 ISO RGD PMID:23954924 RGD:11251759 NCBI chr 7:11,602,470...11,720,156
Ensembl chr 7:11,600,795...11,720,318 		JBrowse link
G ELP6 elongator acetyltransferase complex subunit 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27715390) MGI
Ensembl		 PMID:27715390 GO_REF:0000107 NCBI chr13:30,329,815...30,341,952
Ensembl chr13:30,325,249...30,341,295 		JBrowse link
G GDNF glial cell derived neurotrophic factor ISO RGD PMID:16650834 RGD:2324945 NCBI chr16:22,936,602...22,965,929
Ensembl chr16:22,936,604...22,966,536 		JBrowse link
G GNAT1 G protein subunit alpha transducin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21124780)
(PMID:21052544)		 Ensembl
MGI		 PMID:21052544 PMID:21124780 GO_REF:0000107 NCBI chr13:32,671,377...32,678,394
Ensembl chr13:32,671,432...32,678,391 		JBrowse link
G GNB1 G protein subunit beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 6:63,867,155...63,957,514
Ensembl chr 6:63,867,158...63,952,505 		JBrowse link
G GRM6 glutamate metabotropic receptor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 2:79,466,899...79,480,562
Ensembl chr 2:79,466,779...79,479,146 		JBrowse link
G GRN granulin precursor acts_upstream_of_or_within ISO (PMID:28728022) MGI PMID:28728022 NCBI chr12:18,893,772...18,900,444
Ensembl chr12:18,893,770...18,900,446 		JBrowse link
G HPCA hippocalcin ISO RGD PMID:7789406 RGD:9686441 NCBI chr 6:89,187,544...89,197,049
Ensembl chr 6:89,188,133...89,197,045 		JBrowse link
G HPS1 HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chr14:109,730,597...109,755,288
Ensembl chr14:109,730,598...109,751,985 		JBrowse link
G IL4 interleukin 4 ISO RGD PMID:23070471 RGD:7829830 NCBI chr 2:134,986,817...134,994,365
Ensembl chr 2:134,986,817...134,994,365 		JBrowse link
G IMPDH1 inosine monophosphate dehydrogenase 1 ISO RGD PMID:18295529 RGD:5144133 NCBI chr18:19,979,983...19,996,432
Ensembl chr18:19,979,983...19,996,429 		JBrowse link
G IMPDH2 inosine monophosphate dehydrogenase 2 ISO RGD PMID:18295529 RGD:5144133 NCBI chr13:31,658,642...31,663,660
Ensembl chr13:31,658,650...31,663,552 		JBrowse link
G JMJD6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15345036) Ensembl
MGI		 PMID:15345036 GO_REF:0000107 NCBI chr12:4,809,014...4,819,853
Ensembl chr12:4,809,118...4,818,043 		JBrowse link
G LAMA1 laminin subunit alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 6:100,332,843...100,468,457
Ensembl chr 6:100,332,956...100,468,454 		JBrowse link
G LAMB2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19907020) Ensembl
MGI		 PMID:19907020 GO_REF:0000107 NCBI chr13:31,738,282...31,750,623
Ensembl chr13:31,738,286...31,750,833 		JBrowse link
G LAMC3 laminin subunit gamma 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19907020) Ensembl
MGI		 PMID:19907020 GO_REF:0000107 NCBI chr 1:271,004,423...271,071,223
Ensembl chr 1:271,004,433...271,071,223 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:16111892) MGI PMID:16111892
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139 		JBrowse link
G LHX2 LIM homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19146846) Ensembl
MGI		 PMID:19146846 GO_REF:0000107 NCBI chr 1:264,900,931...264,920,888
Ensembl chr 1:264,900,591...264,920,890 		JBrowse link
G LIF LIF interleukin 6 family cytokine ISO RGD PMID:16643897 RGD:2326157 NCBI chr14:47,221,540...47,239,513
Ensembl chr14:47,221,560...47,238,749 		JBrowse link
G LPCAT1 lysophosphatidylcholine acyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr16:79,134,396...79,173,775
Ensembl chr16:79,134,465...79,173,772 		JBrowse link
G MAX MYC associated factor X ISO RGD PMID:14603520 RGD:2316820 NCBI chr 7:89,142,966...89,168,265
Ensembl chr 7:89,142,969...89,168,201 		JBrowse link
G MDM1 Mdm1 nuclear protein involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:21052544) GO_Central
MGI		 PMID:21052544 GO_REF:0000033 NCBI chr 5:32,640,939...32,673,624
Ensembl chr 5:32,640,945...32,673,638 		JBrowse link
G MERTK MER proto-oncogene, tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 3:44,349,377...44,483,400
Ensembl chr 3:44,349,385...44,483,402 		JBrowse link
G MFRP membrane frizzled-related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 9:46,550,383...46,556,305
Ensembl chr 9:46,550,315...46,556,077 		JBrowse link
G MFSD8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27654426) MGI
Ensembl		 PMID:27654426 GO_REF:0000107 NCBI chr 8:96,925,063...96,972,390
Ensembl chr 8:96,925,081...96,972,383 		JBrowse link
G MIR183 microRNA mir-183 acts_upstream_of_or_within ISO (PMID:23341629)
(PMID:28819115)		 MGI PMID:23341629 PMID:28819115 NCBI chr18:18,982,269...18,982,338
Ensembl chr18:18,982,269...18,982,338 		JBrowse link
G MIR96 microRNA mir-96 acts_upstream_of_or_within ISO (PMID:23341629)
(PMID:28819115)		 MGI PMID:23341629 PMID:28819115 NCBI chr18:18,982,506...18,982,590
Ensembl chr18:18,982,506...18,982,590 		JBrowse link
G MUSK muscle associated receptor tyrosine kinase ISO RGD PMID:16899069 RGD:2317091 NCBI chr 1:251,650,151...251,758,538
Ensembl chr 1:251,650,710...251,756,608 		JBrowse link
G MYG1 MYG1 exonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:18,512,637...18,516,928
Ensembl chr 5:18,512,697...18,517,174 		JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:11283949), (PMID:9356462) MGI PMID:9356462 PMID:11283949 NCBI chr12:53,647,579...53,781,552 JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr12:20,271,351...20,279,777 JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9071226) Ensembl
MGI		 PMID:9071226 GO_REF:0000107 NCBI chr  X:39,208,115...39,235,879
Ensembl chr  X:39,208,119...39,235,758 		JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728677) Ensembl
MGI		 PMID:15728677 GO_REF:0000107 NCBI chr 9:46,823,552...46,891,564
Ensembl chr 9:46,789,726...46,891,304 		JBrowse link
G NEUROD4 neuronal differentiation 4 ISO RGD PMID:15345241 RGD:2311603 NCBI chr 5:20,046,864...20,057,380
Ensembl chr 5:20,046,937...20,059,128 		JBrowse link
G NFIA nuclear factor I A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31128945) Ensembl
MGI		 PMID:31128945 GO_REF:0000107 NCBI chr 6:150,834,002...151,229,773
Ensembl chr 6:150,835,494...151,426,749 		JBrowse link
G NFIB nuclear factor I B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31128945) Ensembl
MGI		 PMID:31128945 GO_REF:0000107 NCBI chr 1:208,182,397...208,427,504
Ensembl chr 1:208,175,194...208,421,602 		JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:31128945) MGI PMID:31128945 NCBI chr 2:65,954,808...66,056,591
Ensembl chr 2:65,954,811...66,056,567 		JBrowse link
G NOS3 nitric oxide synthase 3 ISO RGD PMID:16639026 RGD:7771562 NCBI chr18:6,209,218...6,228,912
Ensembl chr18:6,209,158...6,228,943 		JBrowse link
G NPHP1 nephrocystin 1 involved_in ISO (PMID:19208653) UniProt PMID:19208653 NCBI chr 3:46,316,864...46,378,279
Ensembl chr 3:46,316,875...46,377,273 		JBrowse link
G NPHP4 nephrocystin 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 6:66,815,282...66,928,245
Ensembl chr 6:66,815,281...66,928,146 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16702404)
(PMID:11997145)		 Ensembl
MGI		 PMID:11997145 PMID:16702404 GO_REF:0000107 NCBI chr 1:74,266,667...74,292,686
Ensembl chr 1:74,271,042...74,292,681 		JBrowse link
G NR2E3 nuclear receptor subfamily 2 group E member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12407160)
(PMID:21052544)		 Ensembl
MGI		 PMID:12407160 PMID:21052544 GO_REF:0000107 NCBI chr 1:169,358,662...169,373,175
Ensembl chr 1:169,360,729...169,366,087 		JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 ISO RGD PMID:22714110 RGD:124713571 NCBI chr15:63,487,051...63,506,249
Ensembl chr15:63,487,731...63,495,299 		JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25542970) Ensembl
MGI		 PMID:25542970 GO_REF:0000107 NCBI chr10:30,030,050...30,429,938
Ensembl chr10:30,033,405...30,429,882 		JBrowse link
G OPA1 OPA1 mitochondrial dynamin like GTPase ISO RGD PMID:15505078 RGD:1547836 NCBI chr13:130,624,771...130,718,345
Ensembl chr13:130,624,796...130,719,083 		JBrowse link
G OPN4 opsin 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21124780) Ensembl
MGI		 PMID:21124780 GO_REF:0000107 NCBI chr14:87,645,563...87,660,820
Ensembl chr14:87,647,238...87,658,815 		JBrowse link
G PAX4 paired box 4 involved_in ISO
IBA		 RGD
GO_Central		 PMID:19012751 GO_REF:0000033 RGD:2311636 NCBI chr18:20,675,874...20,680,315
Ensembl chr18:20,673,114...20,680,287 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:19146846) RGD
GO_Central
MGI
Ensembl		 PMID:19012751 PMID:19146846 GO_REF:0000033 GO_REF:0000107 RGD:2311636 NCBI chr 2:28,971,565...29,001,149
Ensembl chr 2:28,978,287...29,001,200 		JBrowse link
G PDE6A phosphodiesterase 6A involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:21052544) GO_Central
MGI		 PMID:21052544 GO_REF:0000033 NCBI chr 2:150,926,652...150,986,050
Ensembl chr 2:150,927,770...150,985,318 		JBrowse link
G PDE6B phosphodiesterase 6B involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:21052544) Ensembl
GO_Central
MGI		 PMID:21052544 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:80,378...111,960
Ensembl chr 8:80,378...110,672 		JBrowse link
G PDGFB platelet derived growth factor subunit B acts_upstream_of_or_within ISO (PMID:25224828) MGI PMID:25224828 Ensembl chr 5:8,986,462...9,007,435 JBrowse link
G POU4F2 POU class 4 homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8637595)
(PMID:9630743)		 Ensembl
MGI		 PMID:8637595 PMID:9630743 GO_REF:0000107 NCBI chr 8:82,044,443...82,046,377
Ensembl chr 8:82,043,643...82,047,675 		JBrowse link
G PRPH2 peripherin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544)
(PMID:28053051)
(PMID:15964665)		 Ensembl
MGI		 PMID:15964665 PMID:21052544 PMID:28053051 GO_REF:0000107 NCBI chr 7:37,788,547...37,805,142
Ensembl chr 7:37,790,178...37,805,142 		JBrowse link
G PTN pleiotrophin ISO RGD PMID:8453763 PMID:16914133 RGD:9831439 RGD:9831456 NCBI chr18:12,219,708...12,309,045
Ensembl chr18:12,219,787...12,309,044 		JBrowse link
G RBP4 retinol binding protein 4 acts_upstream_of_or_within ISO (PMID:11562477) MGI PMID:11562477 NCBI chr14:105,037,360...105,044,552
Ensembl chr14:105,037,464...105,044,765 		JBrowse link
G RD3 RD3 regulator of GUCY2D involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:21052544) Ensembl
MGI
GO_Central		 PMID:21052544 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:131,712,858...131,716,179
Ensembl chr 9:131,705,229...131,719,288 		JBrowse link
G RET ret proto-oncogene ISO RGD PMID:16650834 RGD:2324945 NCBI chr14:61,305,818...61,361,416
Ensembl chr14:61,305,841...61,361,412 		JBrowse link
G RHO rhodopsin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr13:68,908,578...68,913,651
Ensembl chr13:68,908,578...68,913,651 		JBrowse link
G RNPEP arginyl aminopeptidase ISO RGD PMID:15500823 RGD:2325937 NCBI chr10:24,218,144...24,235,520
Ensembl chr10:24,218,139...24,235,518 		JBrowse link
G ROM1 retinal outer segment membrane protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28053051) Ensembl
MGI		 PMID:28053051 GO_REF:0000107 NCBI chr 2:9,125,377...9,127,615
Ensembl chr 2:9,125,381...9,127,615 		JBrowse link
G RORB RAR related orphan receptor B involved_in ISO (PMID:23652001) UniProt PMID:23652001 NCBI chr 1:227,573,972...227,776,806
Ensembl chr 1:227,574,648...227,772,671 		JBrowse link
G RP1 RP1 axonemal microtubule associated involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:21052544) Ensembl
MGI
GO_Central		 PMID:21052544 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:76,724,604...76,730,264
Ensembl chr 4:76,724,604...76,734,610 		JBrowse link
G RPGRIP1 RPGR interacting protein 1 acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chr 7:77,813,964...77,903,973
Ensembl chr 7:77,813,775...77,903,928 		JBrowse link
G RPL24 ribosomal protein L24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10049578), (PMID:9331275) Ensembl
MGI		 PMID:9331275 PMID:10049578 GO_REF:0000107 NCBI chr13:157,411,933...157,418,663
Ensembl chr13:157,411,987...157,418,660 		JBrowse link
G RRM1 ribonucleotide reductase catalytic subunit M1 ISO RGD PMID:2647502 RGD:5133699 NCBI chr 9:6,026,151...6,065,211
Ensembl chr 9:6,025,073...6,065,143 		JBrowse link
G SCAPER S-phase cyclin A associated protein in the ER acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:28794130) MGI
Ensembl		 PMID:28794130 GO_REF:0000107 NCBI chr 7:56,583,247...57,012,312
Ensembl chr 7:56,583,160...57,011,914 		JBrowse link
G SERPINF1 serpin family F member 1 ISO RGD PMID:21738387 RGD:8655555 NCBI chr12:47,949,004...47,959,471
Ensembl chr12:47,948,510...47,959,470 		JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (PMID:17003410) MGI PMID:17003410 NCBI chr 6:64,188,265...64,242,596
Ensembl chr 6:64,188,236...64,242,560 		JBrowse link
G SLC1A1 solute carrier family 1 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:217,366,493...217,441,643
Ensembl chr 1:217,366,499...217,441,674 		JBrowse link
G SLC38A8 solute carrier family 38 member 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:37862028) MGI
Ensembl		 PMID:37862028 GO_REF:0000107 NCBI chr 6:4,563,967...4,593,667
Ensembl chr 6:4,564,533...4,594,520 		JBrowse link
G SLC4A5 solute carrier family 4 member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21705333) Ensembl
MGI		 PMID:21705333 GO_REF:0000107 NCBI chr 3:68,733,379...68,819,293
Ensembl chr 3:68,692,693...68,819,293 		JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19490914) Ensembl
MGI		 PMID:19490914 GO_REF:0000107 NCBI chr 3:40,825,151...40,830,085
Ensembl chr 3:40,825,157...40,830,736 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:19490914) Ensembl
MGI
UniProt		 PMID:19490914 GO_REF:0000024 GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315 		JBrowse link
G TBC1D32 TBC1 domain family member 32 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20159594) Ensembl
MGI		 PMID:20159594 GO_REF:0000107 NCBI chr 1:41,057,782...41,265,416
Ensembl chr 1:41,057,838...41,265,375 		JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20711468) Ensembl
MGI		 PMID:20711468 GO_REF:0000107 NCBI chr 2:4,844,627...4,860,562
Ensembl chr 2:4,844,637...4,860,498 		JBrowse link
G TENT2 terminal nucleotidyltransferase 2 ISO RGD PMID:23700402 RGD:11041783 NCBI chr 2:88,328,250...88,388,242
Ensembl chr 2:88,328,258...88,388,241 		JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (PMID:18973577) MGI PMID:18973577 NCBI chr 6:103,226,395...103,234,591
Ensembl chr 6:103,226,402...103,234,610 		JBrowse link
G TGIF2 TGFB induced factor homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18926818) Ensembl
MGI		 PMID:18926818 GO_REF:0000107 NCBI chr17:39,840,649...39,858,162
Ensembl chr17:39,675,088...39,858,154 		JBrowse link
G TTLL5 tubulin tyrosine ligase like 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24791901) MGI
Ensembl		 PMID:24791901 GO_REF:0000107 NCBI chr 7:98,822,338...99,090,076
Ensembl chr 7:98,823,871...99,130,915 		JBrowse link
G TUB TUB bipartite transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 9:1,183,821...1,260,209
Ensembl chr 9:1,183,822...1,206,274 		JBrowse link
G TULP1 TUB like protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 7:31,362,670...31,379,948
Ensembl chr 7:31,361,873...31,379,204 		JBrowse link
G UCHL3 ubiquitin C-terminal hydrolase L3 acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chr11:47,829,037...47,885,800
Ensembl chr11:47,828,421...47,887,629 		JBrowse link
G USH2A usherin ISO RGD PMID:12160733 RGD:634438 NCBI chr10:5,825,591...6,662,733 JBrowse link
G VAX2 ventral anterior homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10595508) Ensembl
MGI		 PMID:10595508 GO_REF:0000107 NCBI chr 3:71,593,807...71,622,487
Ensembl chr 3:71,593,812...71,622,444 		JBrowse link
G XRN2 5'-3' exoribonuclease 2 ISO RGD PMID:23700402 RGD:11041783 NCBI chr17:29,107,641...29,193,500
Ensembl chr17:29,107,667...29,193,479 		JBrowse link
G ZNF513 zinc finger protein 513 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:111,771,406...111,774,928
Ensembl chr 3:111,771,239...111,774,925 		JBrowse link
retina layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:28,566,279...28,760,471
Ensembl chr 1:28,566,397...28,760,467 		JBrowse link
G ARL6 ADP ribosylation factor like GTPase 6 acts_upstream_of_or_within ISO (PMID:22139371)
(PMID:20333246)		 MGI PMID:20333246 PMID:22139371 NCBI chr13:162,509,451...162,556,675
Ensembl chr13:162,504,109...162,556,280 		JBrowse link
G CALB1 calbindin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:46,701,276...46,723,548
Ensembl chr 4:46,701,045...46,725,197 		JBrowse link
G CRB1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17234588) Ensembl
MGI		 PMID:17234588 GO_REF:0000107 NCBI chr10:20,137,246...20,332,539
Ensembl chr10:20,137,451...20,332,414 		JBrowse link
G FAT3 FAT atypical cadherin 3 acts_upstream_of_or_within ISO (PMID:21903076) MGI PMID:21903076 NCBI chr 9:24,772,394...25,476,424 JBrowse link
G FJX1 four-jointed box kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21903076) Ensembl
MGI		 PMID:21903076 GO_REF:0000107 NCBI chr 2:25,420,657...25,423,549
Ensembl chr 2:25,420,667...25,423,166 		JBrowse link
G FOXN4 forkhead box N4 involved_in ISO (PMID:15363391) UniProt PMID:15363391 NCBI chr14:41,589,128...41,614,488 JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:106,570,950...106,627,114
Ensembl chr 4:106,572,755...106,627,418 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:9,940,535...10,141,815
Ensembl chr18:9,861,792...10,135,065 		JBrowse link
G IRX6 iroquois homeobox 6 acts_upstream_of_or_within ISO (PMID:23172916) MGI PMID:23172916 NCBI chr 6:30,198,948...30,204,587
Ensembl chr 6:30,198,956...30,205,319 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:16111892) MGI PMID:16111892
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139 		JBrowse link
G LOC100523747 phospholipid-transporting ATPase IB involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:3,277,395...3,793,881
Ensembl chr11:3,277,951...3,793,881 		JBrowse link
G MEGF11 multiple EGF like domains 11 involved_in ISO (PMID:22407321) UniProt PMID:22407321 NCBI chr 1:163,894,929...164,275,439
Ensembl chr 1:163,894,312...164,275,442 		JBrowse link
G MIR145 microRNA mir-145 ISO RGD PMID:34291866 RGD:155260301 NCBI chr 2:150,580,126...150,580,211
Ensembl chr 2:150,580,126...150,580,211 		JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29654250) Ensembl
MGI		 PMID:29654250 GO_REF:0000107 NCBI chr  X:39,208,115...39,235,879
Ensembl chr  X:39,208,119...39,235,758 		JBrowse link
G PROM1 prominin 1 involved_in ISO (PMID:19228982) UniProt PMID:19228982 NCBI chr 8:11,215,659...11,331,442
Ensembl chr 8:11,215,663...11,317,312 		JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:51,817,697...51,820,147
Ensembl chr10:51,817,924...51,819,960 		JBrowse link
G PTPRM protein tyrosine phosphatase receptor type M involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:99,350,301...100,092,966
Ensembl chr 6:99,350,303...100,092,883 		JBrowse link
G RDH13 retinol dehydrogenase 13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22605914) Ensembl
MGI		 PMID:22605914 GO_REF:0000107 NCBI chr 6:59,274,383...59,293,139
Ensembl chr 6:59,274,387...59,292,765 		JBrowse link
G RS1 retinoschisin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11983912)
(PMID:15326152)		 Ensembl
MGI		 PMID:11983912 PMID:15326152 GO_REF:0000107 NCBI chr  X:15,080,972...15,099,426
Ensembl chr  X:15,085,050...15,109,243 		JBrowse link
G SDK2 sidekick cell adhesion molecule 2 involved_in ISO (PMID:26287463) UniProt PMID:26287463 NCBI chr12:7,332,052...7,617,231 JBrowse link
G SLC1A1 solute carrier family 1 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19766171) Ensembl
MGI		 PMID:19766171 GO_REF:0000107 NCBI chr 1:217,366,493...217,441,643
Ensembl chr 1:217,366,499...217,441,674 		JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISO (PMID:20607706) UniProt PMID:20607706 NCBI chr 7:7,221,654...7,244,626
Ensembl chr 7:7,221,656...7,244,612 		JBrowse link
G TFAP2B transcription factor AP-2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:44,745,653...44,774,563
Ensembl chr 7:44,745,827...44,770,606 		JBrowse link
G TSPAN12 tetraspanin 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:26,046,645...26,112,924
Ensembl chr18:26,046,703...26,112,918 		JBrowse link
retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:17092954) MGI PMID:17092954 NCBI chr 4:69,801,619...69,803,375
Ensembl chr 4:69,802,200...69,803,309 		JBrowse link
G CRB1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17234588), (PMID:25147295) Ensembl
MGI		 PMID:17234588 PMID:25147295 GO_REF:0000107 NCBI chr10:20,137,246...20,332,539
Ensembl chr10:20,137,451...20,332,414 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:198,815...211,346
Ensembl chr 1:199,358...211,346 		JBrowse link
G IMPG2 interphotoreceptor matrix proteoglycan 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32265257) Ensembl
MGI		 PMID:32265257 GO_REF:0000107 NCBI chr13:157,672,973...157,763,817
Ensembl chr13:157,675,265...157,759,266 		JBrowse link
G LRP5 LDL receptor related protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:4,533,721...4,653,997
Ensembl chr 2:4,533,614...4,653,944 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:18985738) MGI PMID:18985738 NCBI chr 5:60,149,041...60,318,719
Ensembl chr 5:60,149,028...60,314,662 		JBrowse link
G MAN2A1 mannosidase alpha class 2A member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20144606) Ensembl
MGI		 PMID:20144606 GO_REF:0000107 NCBI chr 2:114,675,786...114,853,133
Ensembl chr 2:114,675,917...114,855,548 		JBrowse link
G MFSD2A MFSD2 lysolipid transporter A, lysophospholipid involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27008858) Ensembl
ARUK-UCL		 PMID:27008858 GO_REF:0000107 NCBI chr 6:95,738,961...95,753,245
Ensembl chr 6:95,738,969...95,753,245 		JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15716406) Ensembl
MGI		 PMID:15716406 GO_REF:0000107 NCBI chr  X:39,208,115...39,235,879
Ensembl chr  X:39,208,119...39,235,758 		JBrowse link
G NECTIN3 nectin cell adhesion molecule 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728677) Ensembl
MGI		 PMID:15728677 GO_REF:0000107 NCBI chr13:148,448,581...148,578,920
Ensembl chr13:148,452,309...148,579,052 		JBrowse link
G PROM1 prominin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:11,215,659...11,331,442
Ensembl chr 8:11,215,663...11,317,312 		JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17301087) Ensembl
MGI		 PMID:17301087 GO_REF:0000107 NCBI chr10:51,817,697...51,820,147
Ensembl chr10:51,817,924...51,819,960 		JBrowse link
G ROM1 retinal outer segment membrane protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20300562) Ensembl
MGI		 PMID:20300562 GO_REF:0000107 NCBI chr 2:9,125,377...9,127,615
Ensembl chr 2:9,125,381...9,127,615 		JBrowse link
G RP1 RP1 axonemal microtubule associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 4:76,724,604...76,730,264
Ensembl chr 4:76,724,604...76,734,610 		JBrowse link
G RPGR retinitis pigmentosa GTPase regulator acts_upstream_of_or_within ISO (PMID:10725384) MGI PMID:10725384 NCBI chr  X:34,238,961...34,522,814
Ensembl chr  X:34,228,124...34,296,589 		JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:16651659) MGI PMID:16651659 NCBI chr13:119,668,476...119,669,435
Ensembl chr13:119,668,476...119,669,435 		JBrowse link
G VSX2 visual system homeobox 2 acts_upstream_of_or_within ISO (PMID:16854970), (PMID:8630490) MGI PMID:8630490 PMID:16854970 NCBI chr 7:97,532,021...97,551,072
Ensembl chr 7:97,531,860...97,552,033 		JBrowse link
retina vasculature development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR2B activin A receptor type 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:23,237,699...23,276,086
Ensembl chr13:23,237,699...23,267,373 		JBrowse link
G ACVRL1 activin A receptor like type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:17,267,483...17,284,155
Ensembl chr 5:17,268,130...17,286,276 		JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:105,971,577...106,132,496
Ensembl chr15:105,970,428...106,135,730 		JBrowse link
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19005183) Ensembl
MGI		 PMID:19005183 GO_REF:0000107 NCBI chr 3:102,195,743...102,205,687
Ensembl chr 3:102,195,741...102,205,683 		JBrowse link
G FZD4 frizzled class receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23217714)
(PMID:25083995), (PMID:25414188)		 Ensembl
MGI		 PMID:23217714 PMID:25083995 PMID:25414188 GO_REF:0000107 NCBI chr 9:20,714,995...20,721,460
Ensembl chr 9:20,717,344...20,721,460 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21212189) Ensembl
MGI		 PMID:21212189 GO_REF:0000107 NCBI chr 1:190,625,436...190,673,926
Ensembl chr 1:190,625,244...190,674,845 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:16111892) MGI PMID:16111892
G LRP5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22272305)
(PMID:25083995)		 Ensembl
MGI		 PMID:22272305 PMID:25083995 GO_REF:0000107 NCBI chr 2:4,533,721...4,653,997
Ensembl chr 2:4,533,614...4,653,944 		JBrowse link
G MIR218-1 microRNA mir-218-1 acts_upstream_of_or_within ISO (PMID:20947829) MGI PMID:20947829 NCBI chr 8:15,047,602...15,047,685
Ensembl chr 8:15,047,602...15,047,685 		JBrowse link
G MIR218B microRNA mir-218b acts_upstream_of_or_within ISO (PMID:20947829) MGI PMID:20947829 NCBI chr16:55,115,926...55,116,009
Ensembl chr16:55,115,926...55,116,009 		JBrowse link
G MIR23A microRNA mir-23a acts_upstream_of_or_within ISO (PMID:21536891) MGI PMID:21536891 NCBI chr 2:65,308,117...65,308,186
Ensembl chr 2:65,308,117...65,308,186 		JBrowse link
G MIR23B microRNA mir-23b acts_upstream_of_or_within ISO (PMID:21536891) MGI PMID:21536891 NCBI chr10:27,080,197...27,080,276
Ensembl chr10:27,080,197...27,080,276 		JBrowse link
G MIR27A microRNA mir-27a acts_upstream_of_or_within ISO (PMID:21536891) MGI PMID:21536891 NCBI chr 2:65,308,294...65,308,375
Ensembl chr 2:65,308,294...65,308,375 		JBrowse link
G MIR27B microRNA mir-27b acts_upstream_of_or_within ISO (PMID:21536891) MGI PMID:21536891 NCBI chr10:27,079,963...27,080,042
Ensembl chr10:27,079,954...27,080,056 		JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15716406), (PMID:29715368)
(PMID:25083995), (PMID:25414188)
(PMID:23217714)
(PMID:15716406), (PMID:18978344), (PMID:28575130), (PMID:29654250)		 Ensembl
MGI		 PMID:15716406 PMID:18978344 PMID:23217714 PMID:25083995 PMID:25414188 More... GO_REF:0000107 NCBI chr  X:39,208,115...39,235,879
Ensembl chr  X:39,208,119...39,235,758 		JBrowse link
G NRP1 neuropilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25414188) Ensembl
MGI		 PMID:25414188 GO_REF:0000107 NCBI chr10:56,280,673...56,430,832
Ensembl chr10:56,280,665...56,430,777 		JBrowse link
G PDGFB platelet derived growth factor subunit B acts_upstream_of_or_within ISO (PMID:25224828) MGI PMID:25224828 Ensembl chr 5:8,986,462...9,007,435 JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:40,966,568...41,021,440
Ensembl chr 8:40,967,493...41,021,441 		JBrowse link
G PDGFRB platelet derived growth factor receptor beta involved_in ISO (PMID:11239463)
(PMID:14624252)		 UniProt PMID:11239463 PMID:14624252 NCBI chr 2:151,155,753...151,192,818
Ensembl chr 2:151,155,756...151,192,647 		JBrowse link
G ROM1 retinal outer segment membrane protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20300562) Ensembl
MGI		 PMID:20300562 GO_REF:0000107 NCBI chr 2:9,125,377...9,127,615
Ensembl chr 2:9,125,381...9,127,615 		JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:29715368) MGI
Ensembl		 PMID:29715368 GO_REF:0000107 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046 		JBrowse link
G VSTM4 V-set and transmembrane domain containing 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31698979) Ensembl
MGI		 PMID:31698979 GO_REF:0000107 NCBI chr14:89,650,740...89,739,263
Ensembl chr14:89,650,744...89,739,269 		JBrowse link
retina vasculature morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARHGEF15 Rho guanine nucleotide exchange factor 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22535667) Ensembl
MGI		 PMID:22535667 GO_REF:0000107 NCBI chr12:53,495,409...53,506,373
Ensembl chr12:53,495,453...53,506,352 		JBrowse link
G CLIC4 chloride intracellular channel 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19197003) Ensembl
MGI		 PMID:19197003 GO_REF:0000107 NCBI chr 6:82,401,041...82,483,038
Ensembl chr 6:82,401,188...82,483,724 		JBrowse link
G FZD4 frizzled class receptor 4 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:19837032) Ensembl
GO_Central
MGI		 PMID:19837032 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:20,714,995...20,721,460
Ensembl chr 9:20,717,344...20,721,460 		JBrowse link
G LRP5 LDL receptor related protein 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18263894)
(PMID:19837032)
(PMID:11956231)		 RGD
MGI
Ensembl		 PMID:11956231 PMID:18263894 PMID:19837032 PMID:32833527 GO_REF:0000107 RGD:40902996 NCBI chr 2:4,533,721...4,653,997
Ensembl chr 2:4,533,614...4,653,944 		JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18978344)
(PMID:19837032)		 Ensembl
MGI		 PMID:18978344 PMID:19837032 GO_REF:0000107 NCBI chr  X:39,208,115...39,235,879
Ensembl chr  X:39,208,119...39,235,758 		JBrowse link
G NRP1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:56,280,673...56,430,832
Ensembl chr10:56,280,665...56,430,777 		JBrowse link
G RHOJ ras homolog family member J involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22535667) Ensembl
MGI		 PMID:22535667 GO_REF:0000107 NCBI chr 1:194,761,588...194,843,867
Ensembl chr 1:194,760,939...194,844,356 		JBrowse link
G SLC4A7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO (PMID:12808454) MGI PMID:12808454 NCBI chr13:13,933,552...14,043,108
Ensembl chr13:13,933,711...14,043,058 		JBrowse link
retinal bipolar neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:17092954) MGI PMID:17092954 NCBI chr 4:69,801,619...69,803,375
Ensembl chr 4:69,802,200...69,803,309 		JBrowse link
G CABP4 calcium binding protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16249514) Ensembl
MGI		 PMID:16249514 GO_REF:0000107 NCBI chr 2:5,068,535...5,079,482
Ensembl chr 2:5,068,037...5,072,188 		JBrowse link
G CASZ1 castor zinc finger 1 acts_upstream_of_or_within ISO (PMID:24467707) MGI PMID:24467707 NCBI chr 6:70,876,329...71,029,495
Ensembl chr 6:70,878,983...70,933,357 		JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:25654255) MGI PMID:25654255 NCBI chr 9:136,372,202...136,464,942
Ensembl chr 9:136,372,725...136,464,940 		JBrowse link
G IRX5 iroquois homeobox 5 acts_upstream_of_or_within ISO (PMID:18322081) MGI PMID:18322081 NCBI chr 6:30,511,263...30,515,015
Ensembl chr 6:30,511,894...30,514,808 		JBrowse link
G IRX6 iroquois homeobox 6 acts_upstream_of_or_within ISO (PMID:23172916) MGI PMID:23172916 NCBI chr 6:30,198,948...30,204,587
Ensembl chr 6:30,198,956...30,205,319 		JBrowse link
G PRDM1 PR/SET domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28199486) Ensembl
MGI		 PMID:28199486 GO_REF:0000107 NCBI chr 1:72,309,096...72,335,474
Ensembl chr 1:72,311,880...72,335,466 		JBrowse link
G VSX1 visual system homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14745032)
(PMID:18322081)
(PMID:15043821)		 Ensembl
MGI		 PMID:14745032 PMID:15043821 PMID:18322081 GO_REF:0000107 NCBI chr17:30,848,497...30,856,014
Ensembl chr17:30,848,484...30,856,213 		JBrowse link
G VSX2 visual system homeobox 2 acts_upstream_of_or_within ISO (PMID:8630490) MGI PMID:8630490 NCBI chr 7:97,532,021...97,551,072
Ensembl chr 7:97,531,860...97,552,033 		JBrowse link
G ZHX2 zinc fingers and homeoboxes 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:16,374,900...16,553,859
Ensembl chr 4:16,374,902...16,553,002 		JBrowse link
retinal blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL4A1 collagen type IV alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:76,858,332...76,997,409
Ensembl chr11:76,858,356...76,997,322 		JBrowse link
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:102,195,743...102,205,687
Ensembl chr 3:102,195,741...102,205,683 		JBrowse link
G FZD4 frizzled class receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:20,714,995...20,721,460
Ensembl chr 9:20,717,344...20,721,460 		JBrowse link
G LAMA1 laminin subunit alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 6:100,332,843...100,468,457
Ensembl chr 6:100,332,956...100,468,454 		JBrowse link
G LRP5 LDL receptor related protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:4,533,721...4,653,997
Ensembl chr 2:4,533,614...4,653,944 		JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18978344), (PMID:22394677), (PMID:28575130) Ensembl
MGI		 PMID:18978344 PMID:22394677 PMID:28575130 GO_REF:0000107 NCBI chr  X:39,208,115...39,235,879
Ensembl chr  X:39,208,119...39,235,758 		JBrowse link
retinal cone cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 involved_in ISO (PMID:20081859) CACAO PMID:20081859 NCBI chr 1:28,566,279...28,760,471
Ensembl chr 1:28,566,397...28,760,467 		JBrowse link
G CABP4 calcium binding protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16249514) Ensembl
MGI		 PMID:16249514 GO_REF:0000107 NCBI chr 2:5,068,535...5,079,482
Ensembl chr 2:5,068,037...5,072,188 		JBrowse link
G CNGA3 cyclic nucleotide gated channel subunit alpha 3 acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chr 3:55,872,607...55,936,516
Ensembl chr 3:55,874,250...55,922,979 		JBrowse link
G CRB2 crumbs cell polarity complex component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:264,277,549...264,301,731
Ensembl chr 1:264,276,987...264,301,713 		JBrowse link
G DIO3 iodothyronine deiodinase 3 acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:20203194) MGI PMID:20203194
G GNAT2 G protein subunit alpha transducin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17065522), (PMID:21052544) Ensembl
MGI		 PMID:17065522 PMID:21052544 GO_REF:0000107 NCBI chr 4:110,512,349...110,523,222
Ensembl chr 4:110,498,707...110,524,072 		JBrowse link
G HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr16:29,439,294...29,808,855
Ensembl chr16:29,439,264...29,808,993 		JBrowse link
G MIR124A-1 microRNA mir-124a-1 acts_upstream_of_or_within ISO (PMID:21857657) MGI PMID:21857657 NCBI chr 4:69,968,854...69,968,958
Ensembl chr 4:69,968,854...69,968,958 		JBrowse link
G MIR124A-2 microRNA mir-124a-2 acts_upstream_of_or_within ISO (PMID:21857657) MGI PMID:21857657 NCBI chr14:13,201,425...13,201,509
Ensembl chr14:13,201,425...13,201,509 		JBrowse link
G MIR183 microRNA mir-183 acts_upstream_of_or_within ISO (PMID:23341629) MGI PMID:23341629 NCBI chr18:18,982,269...18,982,338
Ensembl chr18:18,982,269...18,982,338 		JBrowse link
G MIR96 microRNA mir-96 acts_upstream_of_or_within ISO (PMID:23341629) MGI PMID:23341629 NCBI chr18:18,982,506...18,982,590
Ensembl chr18:18,982,506...18,982,590 		JBrowse link
G PDE6C phosphodiesterase 6C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr14:105,010,974...105,122,628
Ensembl chr14:105,050,691...105,122,421 		JBrowse link
G RORB RAR related orphan receptor B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:227,573,972...227,776,806
Ensembl chr 1:227,574,648...227,772,671 		JBrowse link
G RP1 RP1 axonemal microtubule associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:76,724,604...76,730,264
Ensembl chr 4:76,724,604...76,734,610 		JBrowse link
G THRB thyroid hormone receptor beta involved_in
acts_upstream_of		 IEA
ISO		 (PMID:20203194) Ensembl
MGI		 PMID:20203194 GO_REF:0000107 NCBI chr13:10,900,716...11,360,587
Ensembl chr13:10,900,724...11,359,544 		JBrowse link
G THY1 Thy-1 cell surface antigen involved_in ISO (PMID:10567740) UniProt PMID:10567740 NCBI chr 9:46,607,022...46,612,691
Ensembl chr 9:46,607,494...46,612,269 		JBrowse link
G USH1C USH1 protein network component harmonin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:41,593,793...41,646,777
Ensembl chr 2:41,593,802...41,647,247 		JBrowse link
retinal cone cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BBS10 Bardet-Biedl syndrome 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:36125046) MGI
Ensembl		 PMID:36125046 GO_REF:0000107 NCBI chr 5:39,557,716...39,566,350
Ensembl chr 5:39,557,715...39,566,323 		JBrowse link
G GNAT1 G protein subunit alpha transducin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19815523) Ensembl
MGI		 PMID:19815523 GO_REF:0000107 NCBI chr13:32,671,377...32,678,394
Ensembl chr13:32,671,432...32,678,391 		JBrowse link
G GNAT2 G protein subunit alpha transducin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19815523) Ensembl
MGI		 PMID:19815523 GO_REF:0000107 NCBI chr 4:110,512,349...110,523,222
Ensembl chr 4:110,498,707...110,524,072 		JBrowse link
G NOTCH1 notch receptor 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16452096) Ensembl
MGI		 PMID:16452096 GO_REF:0000107
retinal pigment epithelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFH complement factor H acts_upstream_of_or_within ISO (PMID:23844226), (PMID:25991857) MGI PMID:23844226 PMID:25991857
G CLDN19 claudin 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:168,695,246...168,699,683
Ensembl chr 6:168,695,246...168,699,924 		JBrowse link
G CLDN3 claudin 3 involved_in ISO (PMID:27593915) ARUK-UCL PMID:27593915 NCBI chr 3:11,019,073...11,020,102
Ensembl chr 3:11,019,073...11,020,102 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18582859) Ensembl