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ONTOLOGY REPORT - ANNOTATIONS

Term:camera-type eye development
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Accession:GO:0043010 term browser browse the term
Definition:The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field.
Synonyms:alt_id: GO:0001747;   GO:0031075
 never_in_taxon: NCBITaxon:6656 ! Arthropoda


show annotations for term's descendants           Sort by:
camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI2 abl interactor 2 acts_upstream_of_or_within ISO (PMID:15572692) MGI PMID:15572692 NCBI chr 2:203,328,394...203,432,169
Ensembl chr 2:203,328,280...203,447,728 		JBrowse link
G AHR aryl hydrocarbon receptor involved_in ISO (PMID:10973493) DFLAT PMID:10973493 NCBI chr 7:17,298,652...17,346,147
Ensembl chr 7:16,916,359...17,346,152 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15366004)
(PMID:16368932)		 Ensembl
MGI		 PMID:15366004 PMID:16368932 GO_REF:0000107 NCBI chr15:57,953,429...58,065,711
Ensembl chr15:57,953,424...58,497,866 		JBrowse link
G ARHGAP35 Rho GTPase activating protein 35 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11044403) Ensembl
MGI		 PMID:11044403 GO_REF:0000107 NCBI chr19:46,860,997...47,005,077
Ensembl chr19:46,860,997...47,005,077 		JBrowse link
G B3GLCT beta 3-glucosyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31600785) MGI
Ensembl		 PMID:31600785 GO_REF:0000107 NCBI chr13:31,199,975...31,332,276
Ensembl chr13:31,199,975...31,332,276 		JBrowse link
G B9D1 B9 domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22179047) Ensembl
MGI		 PMID:22179047 GO_REF:0000107 NCBI chr17:19,334,695...19,377,913
Ensembl chr17:19,334,308...19,378,193 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9268572)
(PMID:14681194)		 Ensembl
MGI		 PMID:9268572 PMID:14681194 GO_REF:0000107 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761 		JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15673568) Ensembl
MGI		 PMID:15673568 GO_REF:0000107 NCBI chr 4:94,757,955...95,158,450
Ensembl chr 4:94,757,955...95,158,448 		JBrowse link
G CACNA1C calcium voltage-gated channel subunit alpha1 C involved_in IMP (PMID:15454078) BHF-UCL PMID:15454078 NCBI chr12:1,970,780...2,697,950
Ensembl chr12:1,970,772...2,697,950 		JBrowse link
G CC2D2A coiled-coil and C2 domain containing 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24947469) Ensembl
MGI		 PMID:24947469 GO_REF:0000107 NCBI chr 4:15,469,865...15,601,557
Ensembl chr 4:15,469,865...15,601,552 		JBrowse link
G CDKN1C cyclin dependent kinase inhibitor 1C acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19276117) MGI
Ensembl		 PMID:19276117 GO_REF:0000107 NCBI chr11:2,883,218...2,885,775
Ensembl chr11:2,883,213...2,885,775 		JBrowse link
G CEP290 centrosomal protein 290 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:88,049,016...88,142,088
Ensembl chr12:88,049,016...88,142,099 		JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16207732) Ensembl
MGI		 PMID:16207732 GO_REF:0000107 NCBI chr 8:60,678,740...60,868,028
Ensembl chr 8:60,678,740...60,868,028 		JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within ISO (PMID:12546709) MGI PMID:12546709 NCBI chr21:43,169,008...43,172,810
Ensembl chr21:43,169,008...43,172,810 		JBrowse link
G CRYAB crystallin alpha B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12546709) Ensembl
MGI		 PMID:12546709 GO_REF:0000107 NCBI chr11:111,908,564...111,923,740
Ensembl chr11:111,908,564...111,923,722 		JBrowse link
G CRYBA1 crystallin beta A1 acts_upstream_of_or_within ISO (PMID:10585769) MGI PMID:10585769 NCBI chr17:29,246,859...29,254,494
Ensembl chr17:29,246,859...29,254,494 		JBrowse link
G CRYBA4 crystallin beta A4 involved_in IMP (PMID:16960806) UniProt PMID:16960806 NCBI chr22:26,590,220...26,630,669
Ensembl chr22:26,621,963...26,630,669 		JBrowse link
G CRYBB2 crystallin beta B2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11381063) RGD
MGI
Ensembl		 PMID:8706714 PMID:11381063 GO_REF:0000107 RGD:1298813 NCBI chr22:25,211,661...25,231,869
Ensembl chr22:25,212,564...25,231,870 		JBrowse link
G CRYGC crystallin gamma C acts_upstream_of_or_within ISO (PMID:11773036) MGI PMID:11773036 NCBI chr 2:208,128,137...208,129,828
Ensembl chr 2:208,128,137...208,129,828 		JBrowse link
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:15967433 GO_REF:0000107 RGD:2306661 NCBI chr15:74,719,542...74,725,528
Ensembl chr15:74,719,542...74,725,536 		JBrowse link
G EFEMP1 EGF containing fibulin extracellular matrix protein 1 involved_in IEP (PMID:25406291) UniProt PMID:25406291 NCBI chr 2:55,865,967...55,923,782
Ensembl chr 2:55,865,967...55,924,139 		JBrowse link
G FAT1 FAT atypical cadherin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:186,587,794...186,726,696
Ensembl chr 4:186,587,794...186,726,722 		JBrowse link
G FBN1 fibrillin 1 involved_in IEP (PMID:25406291) UniProt PMID:25406291 NCBI chr15:48,408,313...48,645,709
Ensembl chr15:48,408,313...48,645,721 		JBrowse link
G FBN2 fibrillin 2 involved_in IEP (PMID:25406291) UniProt PMID:25406291 NCBI chr 5:128,257,909...128,538,245
Ensembl chr 5:128,257,909...128,659,185 		JBrowse link
G FKBP8 FKBP prolyl isomerase 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15105374) Ensembl
MGI		 PMID:15105374 GO_REF:0000107 NCBI chr19:18,531,763...18,543,573
Ensembl chr19:18,531,751...18,544,077 		JBrowse link
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19155270)
(PMID:23591631)		 Ensembl
MGI		 PMID:19155270 PMID:23591631 GO_REF:0000107 NCBI chr19:46,744,760...46,758,575
Ensembl chr19:46,746,046...46,776,988 		JBrowse link
G FOXC1 forkhead box C1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10767326)
(PMID:10395790)		 Ensembl
MGI		 PMID:10395790 PMID:10767326 GO_REF:0000107 NCBI chr 6:1,609,915...1,613,897
Ensembl chr 6:1,609,915...1,613,897 		JBrowse link
G FOXC2 forkhead box C2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10767326) Ensembl
MGI		 PMID:10767326 GO_REF:0000107 NCBI chr16:86,566,829...86,569,728
Ensembl chr16:86,566,829...86,569,728 		JBrowse link
G FOXE3 forkhead box E3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11309658) Ensembl
MGI		 PMID:11309658 GO_REF:0000107 NCBI chr 1:47,416,285...47,418,052
Ensembl chr 1:47,416,285...47,418,052 		JBrowse link
G FOXP2 forkhead box P2 acts_upstream_of_or_within ISO (PMID:17619227) MGI PMID:17619227 NCBI chr 7:114,086,327...114,693,765
Ensembl chr 7:114,086,327...114,693,772 		JBrowse link
G FTX FTX transcript, XIST regulator acts_upstream_of_or_within ISO (PMID:30237402) MGI PMID:30237402 NCBI chr  X:74,028,136...74,293,574
Ensembl chr  X:73,940,435...74,293,574 		JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:17525797) MGI PMID:17525797 NCBI chr 9:86,944,362...86,947,506
Ensembl chr 9:86,944,362...86,947,506 		JBrowse link
G GJA8 gap junction protein alpha 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11782410)
(PMID:15253273)		 Ensembl
MGI		 PMID:11782410 PMID:15253273 GO_REF:0000107 NCBI chr 1:147,902,795...147,914,486
Ensembl chr 1:147,902,795...147,909,269 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18582859) Ensembl
MGI		 PMID:18582859 GO_REF:0000107 NCBI chr 7:41,960,949...42,264,268
Ensembl chr 7:41,960,949...42,264,100 		JBrowse link
G GNAT2 G protein subunit alpha transducin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32049342) Ensembl
MGI		 PMID:32049342 GO_REF:0000107 NCBI chr 1:109,603,091...109,619,616
Ensembl chr 1:109,603,091...109,619,929 		JBrowse link
G GPD2 glycerol-3-phosphate dehydrogenase 2 acts_upstream_of_or_within ISO (PMID:21296886) MGI PMID:21296886 NCBI chr 2:156,400,281...156,586,403
Ensembl chr 2:156,435,290...156,613,735 		JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21377456) Ensembl
MGI		 PMID:21377456 GO_REF:0000107 NCBI chr 8:101,492,439...101,681,200
Ensembl chr 8:101,492,439...101,669,726 		JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:2,528,745...2,530,263
Ensembl chr 1:2,528,745...2,530,263 		JBrowse link
G HESX1 HESX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19093031) Ensembl
MGI		 PMID:19093031 GO_REF:0000107 NCBI chr 3:57,197,838...57,227,615
Ensembl chr 3:57,197,838...57,227,606 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:16488668 RGD:10002779 NCBI chr 9:83,968,083...83,980,615
Ensembl chr 9:83,968,083...83,980,631 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18582859) Ensembl
MGI		 PMID:18582859 GO_REF:0000107 NCBI chr 2:219,054,424...219,060,921
Ensembl chr 2:219,054,424...219,060,921 		JBrowse link
G JAG1 jagged canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10196361) Ensembl
MGI		 PMID:10196361 GO_REF:0000107 NCBI chr20:10,637,684...10,673,999
Ensembl chr20:10,637,684...10,673,999 		JBrowse link
G LIM2 lens intrinsic membrane protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9238094) Ensembl
MGI		 PMID:9238094 GO_REF:0000107 NCBI chr19:51,379,909...51,387,974
Ensembl chr19:51,379,909...51,387,974 		JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:10660670)
(PMID:20568247)		 MGI PMID:10660670 PMID:20568247 NCBI chr 9:126,613,928...126,701,032
Ensembl chr 9:126,613,928...126,701,032 		JBrowse link
G MAB21L1 mab-21 like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12642482) Ensembl
MGI		 PMID:12642482 GO_REF:0000107 NCBI chr13:35,473,789...35,476,689
Ensembl chr13:35,473,419...35,478,764 		JBrowse link
G MAB21L2 mab-21 like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15385160) Ensembl
MGI		 PMID:15385160 GO_REF:0000107 NCBI chr 4:150,582,151...150,584,693
Ensembl chr 4:150,582,151...150,584,693 		JBrowse link
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 acts_upstream_of_or_within ISO (PMID:12941696) MGI PMID:12941696 NCBI chr 5:56,815,549...56,896,152
Ensembl chr 5:56,815,549...56,896,152 		JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14500757) Ensembl
MGI		 PMID:14500757 GO_REF:0000107 NCBI chr17:39,404,285...39,451,263
Ensembl chr17:39,404,285...39,451,272 		JBrowse link
G MITF melanocyte inducing transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15576400) Ensembl
MGI		 PMID:15576400 GO_REF:0000107 NCBI chr 3:69,739,464...69,968,332
Ensembl chr 3:69,739,456...69,968,336 		JBrowse link
G MTERF4 mitochondrial transcription termination factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21531335) Ensembl
MGI		 PMID:21531335 GO_REF:0000107 NCBI chr 2:241,042,586...241,102,287
Ensembl chr 2:241,072,169...241,102,332 		JBrowse link
G MTNR1A melatonin receptor 1A ISO RGD PMID:12890503 RGD:9588674 NCBI chr 4:186,533,655...186,555,567
Ensembl chr 4:186,526,792...186,555,567 		JBrowse link
G MTNR1B melatonin receptor 1B involved_in ISO
IEA		 RGD
Ensembl		 PMID:12890503 GO_REF:0000107 RGD:9588674 NCBI chr11:92,969,651...92,984,960
Ensembl chr11:92,969,651...92,985,066 		JBrowse link
G MYF5 myogenic factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19531352) Ensembl
MGI		 PMID:19531352 GO_REF:0000107 NCBI chr12:80,716,912...80,719,671
Ensembl chr12:80,716,912...80,719,671 		JBrowse link
G NEUROD1 neuronal differentiation 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11861467) Ensembl
MGI		 PMID:11861467 GO_REF:0000107 NCBI chr 2:181,668,295...181,680,517
Ensembl chr 2:181,668,295...181,680,827 		JBrowse link
G NEUROD4 neuronal differentiation 4 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:11861467) Ensembl
GO_Central
MGI		 PMID:11861467 GO_REF:0000033 GO_REF:0000107 NCBI chr12:55,019,974...55,030,017
Ensembl chr12:55,019,974...55,030,017 		JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:18477394) MGI PMID:18477394 NCBI chr19:12,995,475...13,098,796
Ensembl chr19:12,995,475...13,098,796 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16000615)
(PMID:15371513)		 Ensembl
MGI		 PMID:15371513 PMID:16000615 GO_REF:0000107 NCBI chr 6:108,166,022...108,188,809
Ensembl chr 6:108,166,022...108,188,805 		JBrowse link
G PAX2 paired box 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:12756174) UniProt
MGI		 PMID:12756174 GO_REF:0000024 NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,396...100,829,944 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12648492), (PMID:16080917)
(PMID:12183364)
(PMID:12756174)
(PMID:12072567)
(PMID:11062307)
(PMID:11069887)		 Ensembl
MGI		 PMID:11062307 PMID:11069887 PMID:12072567 PMID:12183364 PMID:12648492 More... GO_REF:0000107 NCBI chr11:31,789,026...31,817,961
Ensembl chr11:31,784,779...31,817,961 		JBrowse link
G PCNT pericentrin acts_upstream_of_or_within ISO (PMID:25220058) MGI PMID:25220058 NCBI chr21:46,324,156...46,445,769
Ensembl chr21:46,324,124...46,445,769 		JBrowse link
G PITX2 paired like homeodomain 2 involved_in IMP (PMID:9618168) BHF-UCL PMID:9618168 NCBI chr 4:110,617,423...110,642,123
Ensembl chr 4:110,617,423...110,642,123 		JBrowse link
G PKNOX1 PBX/knotted 1 homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16847320) Ensembl
MGI		 PMID:16847320 GO_REF:0000107 NCBI chr21:42,974,562...43,033,931
Ensembl chr21:42,974,510...43,033,931 		JBrowse link
G PRSS56 serine protease 56 involved_in
acts_upstream_of_or_within		 IEA
ISO
IMP		 (PMID:21532570)
(PMID:21397065)		 Ensembl
MGI
UniProt		 PMID:21397065 PMID:21532570 GO_REF:0000107 NCBI chr 2:232,520,388...232,525,716
Ensembl chr 2:232,520,388...232,525,716 		JBrowse link
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 involved_in IMP (PMID:20512159) BHF-UCL PMID:20512159 NCBI chr 2:135,052,292...135,176,396
Ensembl chr 2:135,052,289...135,176,667 		JBrowse link
G RAX retina and anterior neural fold homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:13970081), (PMID:17247120), (PMID:640224)
(PMID:11105055), (PMID:15789424)		 Ensembl
MGI		 PMID:640224 PMID:11105055 PMID:13970081 PMID:15789424 PMID:17247120 GO_REF:0000107 NCBI chr18:59,267,038...59,273,454
Ensembl chr18:59,267,035...59,274,086 		JBrowse link
G RCN1 reticulocalbin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19474196) Ensembl
MGI		 PMID:19474196 GO_REF:0000107 NCBI chr11:32,091,074...32,105,722
Ensembl chr11:32,091,074...32,105,722 		JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 involved_in ISO
IEA		 RGD
Ensembl		 PMID:9512345 GO_REF:0000107 RGD:633787 NCBI chr 1:68,428,822...68,449,954
Ensembl chr 1:68,428,822...68,451,103 		JBrowse link
G RPGRIP1L RPGRIP1 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17553904), (PMID:17558409) Ensembl
MGI		 PMID:17553904 PMID:17558409 GO_REF:0000107 NCBI chr16:53,598,153...53,703,859
Ensembl chr16:53,598,153...53,703,938 		JBrowse link
G RXRA retinoid X receptor alpha acts_upstream_of_or_within ISO (PMID:9376317) MGI PMID:9376317 NCBI chr 9:134,326,455...134,440,585
Ensembl chr 9:134,317,098...134,440,585 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16236765)
(PMID:12195432)
(PMID:12756179)
(PMID:18582859)		 Ensembl
MGI		 PMID:12195432 PMID:12756179 PMID:16236765 PMID:18582859 GO_REF:0000107 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463 		JBrowse link
G SHROOM2 shroom family member 2 involved_in ISS HGNC-UCL GO_REF:0000024 NCBI chr  X:9,786,429...9,949,443
Ensembl chr  X:9,786,429...9,949,443 		JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within ISO (PMID:12072567) MGI PMID:12072567 NCBI chr 2:44,941,702...44,946,071
Ensembl chr 2:44,941,702...44,946,071 		JBrowse link
G SKI SKI proto-oncogene involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:11731796) BHF-UCL
MGI		 PMID:11731796 GO_REF:0000024 NCBI chr 1:2,228,319...2,310,213
Ensembl chr 1:2,227,388...2,310,213 		JBrowse link
G SLC25A25 solute carrier family 25 member 25 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21296886) Ensembl
MGI		 PMID:21296886 GO_REF:0000107 NCBI chr 9:128,068,232...128,109,245
Ensembl chr 9:128,068,201...128,109,245 		JBrowse link
G SLITRK6 SLIT and NTRK like family member 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23543054) Ensembl
MGI		 PMID:23543054 GO_REF:0000107 NCBI chr13:85,792,790...85,799,419
Ensembl chr13:85,792,790...85,806,683 		JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in IMP (PMID:21901792) UniProt PMID:21901792 NCBI chr15:74,179,466...74,212,259
Ensembl chr15:74,179,466...74,212,267 		JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14757819) Ensembl
MGI		 PMID:14757819 GO_REF:0000107 NCBI chr20:435,480...462,533
Ensembl chr20:423,596...462,566 		JBrowse link
G TBC1D32 TBC1 domain family member 32 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20159594) Ensembl
MGI		 PMID:20159594 GO_REF:0000107 NCBI chr 6:121,079,494...121,334,729
Ensembl chr 6:121,079,494...121,334,745 		JBrowse link
G TMEM231 transmembrane protein 231 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22179047) Ensembl
MGI		 PMID:22179047 GO_REF:0000107 NCBI chr16:75,536,741...75,556,286
Ensembl chr16:75,536,741...75,556,289 		JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within		 IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr11:76,782,280...76,798,144
Ensembl chr11:76,782,251...76,798,153 		JBrowse link
G TWSG1 twisted gastrulation BMP signaling modulator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14681194) Ensembl
MGI		 PMID:14681194 GO_REF:0000107 NCBI chr18:9,334,773...9,402,420
Ensembl chr18:9,334,767...9,402,420 		JBrowse link
G VAX1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15905411) Ensembl
MGI		 PMID:15905411 GO_REF:0000107 NCBI chr10:117,128,520...117,138,270
Ensembl chr10:117,128,521...117,138,301 		JBrowse link
G VAX2 ventral anterior homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15905411) Ensembl
MGI		 PMID:15905411 GO_REF:0000107 NCBI chr 2:70,900,576...70,933,446
Ensembl chr 2:70,900,576...70,965,373 		JBrowse link
G VSX2 visual system homeobox 2 acts_upstream_of_or_within ISO (PMID:15576400) MGI PMID:15576400 NCBI chr14:74,239,449...74,262,738
Ensembl chr14:74,239,449...74,262,738 		JBrowse link
G WDPCP WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24302887) Ensembl
MGI		 PMID:24302887 GO_REF:0000107 NCBI chr 2:63,119,559...63,840,826
Ensembl chr 2:63,119,559...63,827,843 		JBrowse link
G WT1 WT1 transcription factor involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:11889045) UniProt
MGI		 PMID:11889045 GO_REF:0000024 NCBI chr11:32,387,775...32,435,539
Ensembl chr11:32,387,775...32,435,564 		JBrowse link
amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BARHL2 BarH like homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14998930) Ensembl
MGI		 PMID:14998930 GO_REF:0000107 NCBI chr 1:90,711,539...90,717,302
Ensembl chr 1:90,711,539...90,717,302 		JBrowse link
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:17092954) MGI PMID:17092954 NCBI chr 8:64,580,365...64,583,627
Ensembl chr 8:64,580,365...64,583,627 		JBrowse link
G FOXN4 forkhead box N4 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:15363391) Ensembl
MGI
UniProt		 PMID:15363391 GO_REF:0000024 GO_REF:0000107 NCBI chr12:109,277,978...109,309,284
Ensembl chr12:109,277,978...109,309,284 		JBrowse link
G GDF11 growth differentiation factor 11 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15976303) Ensembl
MGI		 PMID:15976303 GO_REF:0000107 NCBI chr12:55,743,122...55,757,264
Ensembl chr12:55,743,122...55,757,264 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16038893) Ensembl
MGI		 PMID:16038893 GO_REF:0000107 NCBI chr 3:194,136,148...194,138,732
Ensembl chr 3:194,136,148...194,138,732 		JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:25654255) MGI PMID:25654255 NCBI chr 7:50,303,455...50,405,101
Ensembl chr 7:50,304,068...50,405,101 		JBrowse link
G MIAT myocardial infarction associated transcript acts_upstream_of_or_within ISO (PMID:20459797) MGI PMID:20459797 NCBI chr22:26,646,429...26,676,478
Ensembl chr22:26,646,411...26,676,478 		JBrowse link
G NEUROD1 neuronal differentiation 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:181,668,295...181,680,517
Ensembl chr 2:181,668,295...181,680,827 		JBrowse link
G NEUROD4 neuronal differentiation 4 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:55,019,974...55,030,017
Ensembl chr12:55,019,974...55,030,017 		JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:17301087) UniProt
MGI
Ensembl		 PMID:17301087 GO_REF:0000024 GO_REF:0000107 NCBI chr10:23,192,312...23,194,245
Ensembl chr10:23,192,312...23,194,245 		JBrowse link
G RORB RAR related orphan receptor B involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:74,497,335...74,693,177
Ensembl chr 9:74,497,335...74,693,177 		JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of ISO (PMID:18973577) MGI PMID:18973577 NCBI chr18:3,412,009...3,459,978
Ensembl chr18:3,411,608...3,459,978 		JBrowse link
G TGIF2 TGFB induced factor homeobox 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:18926818) Ensembl
MGI		 PMID:18926818 GO_REF:0000107 NCBI chr20:36,573,464...36,593,950
Ensembl chr20:36,573,488...36,593,950 		JBrowse link
camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27687499) MGI
Ensembl		 PMID:27687499 GO_REF:0000107 NCBI chr 3:64,515,654...64,688,000
Ensembl chr 3:64,515,654...64,688,000 		JBrowse link
G AQP1 aquaporin 1 (Colton blood group) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11891232) Ensembl
MGI		 PMID:11891232 GO_REF:0000107 NCBI chr 7:30,911,853...30,925,516
Ensembl chr 7:30,911,853...30,925,517 		JBrowse link
G AQP5 aquaporin 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11891232) Ensembl
MGI		 PMID:11891232 GO_REF:0000107 NCBI chr12:49,961,872...49,965,682
Ensembl chr12:49,961,872...49,965,682 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9268572) Ensembl
MGI		 PMID:9268572 GO_REF:0000107 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16854970)
(PMID:16154126)		 Ensembl
MGI		 PMID:16154126 PMID:16854970 GO_REF:0000107 NCBI chr20:57,168,753...57,266,641
Ensembl chr20:57,168,753...57,266,641 		JBrowse link
G C12orf57 chromosome 12 open reading frame 57 involved_in IMP (PMID:23453665), (PMID:23633300), (PMID:24798461) UniProt PMID:23453665 PMID:23633300 PMID:24798461 NCBI chr12:6,943,433...6,946,003
Ensembl chr12:6,942,978...6,946,003 		JBrowse link
G COL8A1 collagen type VIII alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16051690) Ensembl
MGI		 PMID:16051690 GO_REF:0000107 NCBI chr 3:99,638,594...99,799,217
Ensembl chr 3:99,638,475...99,799,226 		JBrowse link
G COL8A2 collagen type VIII alpha 2 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16051690) Ensembl
MGI		 PMID:16051690 GO_REF:0000107 NCBI chr 1:36,095,239...36,125,222
Ensembl chr 1:36,095,239...36,125,222 		JBrowse link
G EPHB1 EPH receptor B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12971893) Ensembl
MGI		 PMID:12971893 GO_REF:0000107 NCBI chr 3:134,795,260...135,260,467
Ensembl chr 3:134,795,260...135,260,467 		JBrowse link
G EPHB2 EPH receptor B2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12971893) Ensembl
MGI		 PMID:12971893 GO_REF:0000107 NCBI chr 1:22,710,838...22,921,500
Ensembl chr 1:22,710,839...22,921,500 		JBrowse link
G FAT1 FAT atypical cadherin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:186,587,794...186,726,696
Ensembl chr 4:186,587,794...186,726,722 		JBrowse link
G FTX FTX transcript, XIST regulator acts_upstream_of_or_within ISO (PMID:30237402) MGI PMID:30237402 NCBI chr  X:74,028,136...74,293,574
Ensembl chr  X:73,940,435...74,293,574 		JBrowse link
G GDF11 growth differentiation factor 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15976303) Ensembl
MGI		 PMID:15976303 GO_REF:0000107 NCBI chr12:55,743,122...55,757,264
Ensembl chr12:55,743,122...55,757,264 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8387379) Ensembl
MGI		 PMID:8387379 GO_REF:0000107 NCBI chr 7:41,960,949...42,264,268
Ensembl chr 7:41,960,949...42,264,100 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22627278) Ensembl
MGI		 PMID:22627278 GO_REF:0000107 NCBI chr14:61,695,513...61,748,258
Ensembl chr14:61,695,513...61,748,259 		JBrowse link
G IFT122 intraflagellar transport 122 involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:129,440,224...129,520,507
Ensembl chr 3:129,429,607...129,520,510 		JBrowse link
G MFN2 mitofusin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16104381) Ensembl
MGI		 PMID:16104381 GO_REF:0000107 NCBI chr 1:11,980,444...12,013,508
Ensembl chr 1:11,980,181...12,015,211 		JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728677) Ensembl
MGI		 PMID:15728677 GO_REF:0000107 NCBI chr11:119,638,098...119,729,200
Ensembl chr11:119,623,408...119,729,200 		JBrowse link
G NF1 neurofibromin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:7926784) Ensembl
MGI
HGNC-UCL		 PMID:7926784 GO_REF:0000024 GO_REF:0000107 NCBI chr17:31,094,927...31,377,677
Ensembl chr17:31,094,927...31,382,116 		JBrowse link
G RING1 ring finger protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16624538) Ensembl
MGI		 PMID:16624538 GO_REF:0000107 NCBI chr 6:33,208,500...33,212,716
Ensembl chr 6:33,208,500...33,212,722 		JBrowse link
G SHROOM2 shroom family member 2 involved_in ISS HGNC-UCL GO_REF:0000024 NCBI chr  X:9,786,429...9,949,443
Ensembl chr  X:9,786,429...9,949,443 		JBrowse link
G SKI SKI proto-oncogene involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:17003410) BHF-UCL
MGI		 PMID:17003410 GO_REF:0000024 NCBI chr 1:2,228,319...2,310,213
Ensembl chr 1:2,227,388...2,310,213 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:5,692,384...5,701,385
Ensembl chr 2:5,692,384...5,701,385 		JBrowse link
G SOX12 SRY-box transcription factor 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:325,552...330,224
Ensembl chr20:325,552...330,224 		JBrowse link
G SOX4 SRY-box transcription factor 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:21,593,751...21,598,619
Ensembl chr 6:21,593,751...21,598,619 		JBrowse link
G TENM3 teneurin transmembrane protein 3 involved_in IMP (PMID:22766609) UniProt PMID:22766609 NCBI chr 4:181,447,613...182,803,024
Ensembl chr 4:182,143,987...182,803,024 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:16251428) BHF-UCL
MGI
Ensembl		 PMID:16251428 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:43,770,211...43,786,487
Ensembl chr 6:43,770,184...43,786,487 		JBrowse link
G VHL von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO (PMID:22627278) MGI PMID:22627278 NCBI chr 3:10,141,778...10,153,667
Ensembl chr 3:10,141,778...10,153,676 		JBrowse link
G YY1 YY1 transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16624538) Ensembl
MGI		 PMID:16624538 GO_REF:0000107 NCBI chr14:100,239,144...100,282,788
Ensembl chr14:100,238,298...100,282,788 		JBrowse link
camera-type eye photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSCAM DS cell adhesion molecule involved_in ISS UniProt GO_REF:0000024 NCBI chr21:40,010,999...40,847,158
Ensembl chr21:40,010,999...40,847,158 		JBrowse link
G PROM1 prominin 1 involved_in ISS
IBA
IMP		 (PMID:18654668) UniProt
GO_Central
BHF-UCL		 PMID:18654668 GO_REF:0000024 GO_REF:0000033 NCBI chr 4:15,968,228...16,084,023
Ensembl chr 4:15,963,076...16,084,378 		JBrowse link
G ROM1 retinal outer segment membrane protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20300562) Ensembl
MGI		 PMID:20300562 GO_REF:0000107 NCBI chr11:62,613,257...62,615,116
Ensembl chr11:62,611,722...62,615,116 		JBrowse link
G SDK2 sidekick cell adhesion molecule 2 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:73,334,384...73,644,445
Ensembl chr17:73,334,384...73,644,445 		JBrowse link
G SLC4A7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO (PMID:12808454) MGI PMID:12808454 NCBI chr 3:27,372,723...27,484,384
Ensembl chr 3:27,372,723...27,484,420 		JBrowse link
G TTC8 tetratricopeptide repeat domain 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21646512) Ensembl
MGI		 PMID:21646512 GO_REF:0000107 NCBI chr14:88,824,153...88,881,079
Ensembl chr14:88,824,153...88,881,078 		JBrowse link
camera-type eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18582859) Ensembl
MGI		 PMID:18582859 GO_REF:0000107 NCBI chr 2:219,054,424...219,060,921
Ensembl chr 2:219,054,424...219,060,921 		JBrowse link
ciliary body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXE3 forkhead box E3 involved_in ISS
IEA		 (PMID:17064680) UniProt
Ensembl		 PMID:17064680 GO_REF:0000107 NCBI chr 1:47,416,285...47,418,052
Ensembl chr 1:47,416,285...47,418,052 		JBrowse link
G JAG1 jagged canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23676271) Ensembl
MGI		 PMID:23676271 GO_REF:0000107 NCBI chr20:10,637,684...10,673,999
Ensembl chr20:10,637,684...10,673,999 		JBrowse link
G NOTCH2 notch receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23676271) Ensembl
MGI		 PMID:23676271 GO_REF:0000107 NCBI chr 1:119,911,553...120,069,662
Ensembl chr 1:119,911,553...120,100,779 		JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within		 IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr11:76,782,280...76,798,144
Ensembl chr11:76,782,251...76,798,153 		JBrowse link
G VHL von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO (PMID:22627278) MGI PMID:22627278 NCBI chr 3:10,141,778...10,153,667
Ensembl chr 3:10,141,778...10,153,676 		JBrowse link
closure of optic fissure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHACTR4 phosphatase and actin regulator 4 involved_in IEA
ISS		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 NCBI chr 1:28,369,740...28,500,364
Ensembl chr 1:28,369,582...28,500,364 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:5,692,384...5,701,385
Ensembl chr 2:5,692,384...5,701,385 		JBrowse link
cone retinal bipolar cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BBS10 Bardet-Biedl syndrome 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:36125046) MGI
Ensembl		 PMID:36125046 GO_REF:0000107 NCBI chr12:76,344,474...76,348,415
Ensembl chr12:76,344,474...76,348,415 		JBrowse link
G GNAT2 G protein subunit alpha transducin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23580486)
(PMID:29518352)		 Ensembl
MGI		 PMID:23580486 PMID:29518352 GO_REF:0000107 NCBI chr 1:109,603,091...109,619,616
Ensembl chr 1:109,603,091...109,619,929 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26607664) Ensembl
MGI		 PMID:26607664 GO_REF:0000107 NCBI chr17:42,536,241...42,544,449
Ensembl chr17:42,536,241...42,544,449 		JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9071226) Ensembl
MGI		 PMID:9071226 GO_REF:0000107 NCBI chr  X:43,948,776...43,973,390
Ensembl chr  X:43,948,776...43,973,395 		JBrowse link
cornea development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27687499) MGI
Ensembl		 PMID:27687499 GO_REF:0000107 NCBI chr 3:64,515,654...64,688,000
Ensembl chr 3:64,515,654...64,688,000 		JBrowse link
G FOXE3 forkhead box E3 involved_in IEA
ISS		 (PMID:17064680) Ensembl
UniProt		 PMID:17064680 GO_REF:0000107 NCBI chr 1:47,416,285...47,418,052
Ensembl chr 1:47,416,285...47,418,052 		JBrowse link
G KERA keratocan involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10802664) Ensembl
MGI		 PMID:10802664 GO_REF:0000107 NCBI chr12:91,050,491...91,058,024
Ensembl chr12:91,050,491...91,058,024 		JBrowse link
G KRT12 keratin 12 involved_in
acts_upstream_of_or_within		 IMP
ISO		 (PMID:26758872)
(PMID:8977471)		 UniProt
MGI		 PMID:8977471 PMID:26758872 NCBI chr17:40,861,303...40,867,223
Ensembl chr17:40,861,303...40,867,223 		JBrowse link
G LIMK2 LIM domain kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26234751) Ensembl
MGI		 PMID:26234751 GO_REF:0000107 NCBI chr22:31,212,298...31,280,080
Ensembl chr22:31,212,239...31,280,080 		JBrowse link
G PAX6 paired box 6 involved_in IMP (PMID:7550230) DFLAT PMID:7550230 NCBI chr11:31,789,026...31,817,961
Ensembl chr11:31,784,779...31,817,961 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:42,456,757...42,589,746
Ensembl chr12:42,456,757...42,590,355 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:5,692,384...5,701,385
Ensembl chr 2:5,692,384...5,701,385 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:16186342) MGI PMID:16186342 NCBI chr 6:10,396,677...10,419,659
Ensembl chr 6:10,393,186...10,419,659 		JBrowse link
G TWIST2 twist family bHLH transcription factor 2 acts_upstream_of_or_within ISO (PMID:20574024) MGI PMID:20574024 NCBI chr 2:238,848,085...238,910,534
Ensembl chr 2:238,848,032...238,910,534 		JBrowse link
G WNT2B Wnt family member 2B involved_in ISS (PMID:16258938) BHF-UCL PMID:16258938 NCBI chr 1:112,466,541...112,530,165
Ensembl chr 1:112,466,541...112,530,165 		JBrowse link
G WNT6 Wnt family member 6 involved_in ISS (PMID:16258938) BHF-UCL PMID:16258938 NCBI chr 2:218,859,805...218,874,233
Ensembl chr 2:218,859,805...218,874,233 		JBrowse link
G WNT9A Wnt family member 9A involved_in ISS (PMID:16258938) BHF-UCL PMID:16258938 NCBI chr 1:227,918,656...227,947,932
Ensembl chr 1:227,918,656...227,947,932 		JBrowse link
G WNT9B Wnt family member 9B involved_in ISS (PMID:16258938) BHF-UCL PMID:16258938 NCBI chr17:46,833,189...46,886,738
Ensembl chr17:46,833,201...46,886,730 		JBrowse link
embryonic camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17184764) Ensembl
MGI		 PMID:17184764 GO_REF:0000107 NCBI chr15:57,953,429...58,065,711
Ensembl chr15:57,953,424...58,497,866 		JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:17184764) UniProt
MGI
Ensembl		 PMID:17184764 GO_REF:0000024 GO_REF:0000107 NCBI chr15:100,879,831...100,916,626
Ensembl chr15:100,861,924...100,916,626 		JBrowse link
G CDK20 cyclin dependent kinase 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28817564) Ensembl
MGI		 PMID:28817564 GO_REF:0000107 NCBI chr 9:87,966,441...87,974,533
Ensembl chr 9:87,966,441...87,974,753 		JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15958512) Ensembl
MGI		 PMID:15958512 GO_REF:0000107 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18791178) Ensembl
MGI		 PMID:18791178 GO_REF:0000107 NCBI chr 2:207,762,598...207,769,906
Ensembl chr 2:207,762,598...207,769,906 		JBrowse link
G IFT140 intraflagellar transport 140 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23469164) Ensembl
MGI		 PMID:23469164 GO_REF:0000107 NCBI chr16:1,510,427...1,612,072
Ensembl chr16:1,510,427...1,612,072 		JBrowse link
G NES nestin involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:156,668,763...156,677,407
Ensembl chr 1:156,668,763...156,677,407 		JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (PMID:10498698)
(PMID:10572050)		 MGI PMID:10498698 PMID:10572050 NCBI chr 4:110,617,423...110,642,123
Ensembl chr 4:110,617,423...110,642,123 		JBrowse link
G PPP1R13L protein phosphatase 1 regulatory subunit 13 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15661756) Ensembl
MGI		 PMID:15661756 GO_REF:0000107 NCBI chr19:45,379,638...45,406,361
Ensembl chr19:45,379,638...45,406,349 		JBrowse link
G RARA retinoic acid receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7607067) Ensembl
MGI		 PMID:7607067 GO_REF:0000107 NCBI chr17:40,309,180...40,357,643
Ensembl chr17:40,309,180...40,357,643 		JBrowse link
G RARG retinoic acid receptor gamma involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7607067) Ensembl
MGI		 PMID:7607067 GO_REF:0000107 NCBI chr12:53,210,569...53,232,209
Ensembl chr12:53,210,567...53,232,980 		JBrowse link
G RDH10 retinol dehydrogenase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17473173) Ensembl
MGI		 PMID:17473173 GO_REF:0000107 NCBI chr 8:73,294,602...73,325,281
Ensembl chr 8:73,294,602...73,325,281 		JBrowse link
G TRAF3IP1 TRAF3 interacting protein 1 acts_upstream_of_or_within ISO (PMID:21945076) MGI PMID:21945076 NCBI chr 2:238,320,518...238,400,900
Ensembl chr 2:238,320,441...238,400,897 		JBrowse link
G TULP3 TUB like protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19286674) Ensembl
MGI		 PMID:19286674 GO_REF:0000107 NCBI chr12:2,890,891...2,941,138
Ensembl chr12:2,877,223...2,941,138 		JBrowse link
G WDR19 WD repeat domain 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22228095) Ensembl
MGI		 PMID:22228095 GO_REF:0000107 NCBI chr 4:39,182,529...39,285,810
Ensembl chr 4:39,182,504...39,285,810 		JBrowse link
embryonic camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in IMP (PMID:17273977) DFLAT PMID:17273977 NCBI chr15:74,179,466...74,212,259
Ensembl chr15:74,179,466...74,212,267 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in IMP (PMID:17070479) BHF-UCL PMID:17070479 NCBI chr 7:19,113,047...19,117,636
Ensembl chr 7:19,020,991...19,117,636 		JBrowse link
embryonic camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10049573) Ensembl
MGI		 PMID:10049573 GO_REF:0000107 NCBI chr20:57,168,753...57,266,641
Ensembl chr20:57,168,753...57,266,641 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18653562) Ensembl
MGI		 PMID:18653562 GO_REF:0000107 NCBI chr 6:139,371,807...139,374,648
Ensembl chr 6:139,371,807...139,374,648 		JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within ISO (PMID:18056999) MGI PMID:18056999 NCBI chr21:43,169,008...43,172,810
Ensembl chr21:43,169,008...43,172,810 		JBrowse link
G FOXF2 forkhead box F2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:1,389,576...1,395,603
Ensembl chr 6:1,389,576...1,395,603 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:207,762,598...207,769,906
Ensembl chr 2:207,762,598...207,769,906 		JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,929,324...113,977,869
Ensembl chr 1:113,929,324...113,977,869 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:139,561,570...139,777,998
Ensembl chr 7:139,561,570...139,777,998 		JBrowse link
G IFT122 intraflagellar transport 122 acts_upstream_of_or_within ISO (PMID:28778798) MGI PMID:28778798 NCBI chr 3:129,440,224...129,520,507
Ensembl chr 3:129,429,607...129,520,510 		JBrowse link
G IFT172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28778798) Ensembl
MGI		 PMID:28778798 GO_REF:0000107 NCBI chr 2:27,444,377...27,489,743
Ensembl chr 2:27,444,377...27,489,805 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18582859) Ensembl
MGI		 PMID:18582859 GO_REF:0000107 NCBI chr 2:219,054,424...219,060,921
Ensembl chr 2:219,054,424...219,060,921 		JBrowse link
G KDM2B lysine demethylase 2B involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:121,408,461...121,582,279
Ensembl chr12:121,429,096...121,582,279 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:18985738)
(PMID:19653321)		 MGI PMID:18985738 PMID:19653321 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18653562) Ensembl
MGI		 PMID:18653562 GO_REF:0000107 NCBI chr11:31,789,026...31,817,961
Ensembl chr11:31,784,779...31,817,961 		JBrowse link
G SP1 Sp1 transcription factor acts_upstream_of_or_within ISO (PMID:17584888) MGI PMID:17584888 NCBI chr12:53,380,176...53,416,446
Ensembl chr12:53,380,176...53,416,446 		JBrowse link
G SP3 Sp3 transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17584888) Ensembl
MGI		 PMID:17584888 GO_REF:0000107 NCBI chr 2:173,900,775...173,965,702
Ensembl chr 2:173,880,850...173,965,373 		JBrowse link
G TBX2 T-box transcription factor 2 involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:61,399,843...61,409,466
Ensembl chr17:61,399,843...61,409,466 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:9811866) MGI PMID:9811866 NCBI chr 6:10,396,677...10,419,659
Ensembl chr 6:10,393,186...10,419,659 		JBrowse link
G TH tyrosine hydroxylase involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr11:2,163,929...2,171,815
Ensembl chr11:2,163,929...2,171,815 		JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18436818) Ensembl
MGI		 PMID:18436818 GO_REF:0000107 NCBI chr10:31,318,417...31,529,804
Ensembl chr10:31,318,495...31,529,814 		JBrowse link
embryonic retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDON cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19754878) Ensembl
MGI		 PMID:19754878 GO_REF:0000107 NCBI chr11:125,956,821...126,063,352
Ensembl chr11:125,955,796...126,063,335 		JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,929,324...113,977,869
Ensembl chr 1:113,929,324...113,977,869 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:139,561,570...139,777,998
Ensembl chr 7:139,561,570...139,777,998 		JBrowse link
G LHX1 LIM homeobox 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:36,936,785...36,944,612
Ensembl chr17:36,936,785...36,944,612 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19653321) MGI PMID:19653321 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEP
IEA		 (PMID:12692551) BHF-UCL
Ensembl		 PMID:12692551 GO_REF:0000107 NCBI chr 1:213,983,151...214,041,510
Ensembl chr 1:213,983,181...214,041,510 		JBrowse link
G RBP4 retinol binding protein 4 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr10:93,591,694...93,601,744
Ensembl chr10:93,591,687...93,601,744 		JBrowse link
establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAT1 FAT atypical cadherin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:186,587,794...186,726,696
Ensembl chr 4:186,587,794...186,726,722 		JBrowse link
extraocular skeletal muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1S calcium voltage-gated channel subunit alpha1 S involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14618389) Ensembl
MGI		 PMID:14618389 GO_REF:0000107 NCBI chr 1:201,039,512...201,112,426
Ensembl chr 1:201,039,512...201,112,451 		JBrowse link
G FOXL2 forkhead box L2 involved_in IMP (PMID:12630957) UniProt PMID:12630957 NCBI chr 3:138,944,224...138,947,137
Ensembl chr 3:138,944,224...138,947,137 		JBrowse link
G MYH15 myosin heavy chain 15 involved_in ISO
IEA		 RGD
Ensembl		 PMID:19948655 GO_REF:0000107 RGD:2317122 NCBI chr 3:108,380,368...108,551,072
Ensembl chr 3:108,380,368...108,529,322 		JBrowse link
G MYOM1 myomesin 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:12878677 GO_REF:0000107 RGD:633368 NCBI chr18:3,066,807...3,247,376
Ensembl chr18:3,066,807...3,219,968 		JBrowse link
G MYOM2 myomesin 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:12878677 GO_REF:0000107 RGD:633368 NCBI chr 8:2,045,046...2,145,456
Ensembl chr 8:2,045,046...2,165,552 		JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (PMID:16638982)
(PMID:21035439)		 MGI PMID:16638982 PMID:21035439 NCBI chr 4:110,617,423...110,642,123
Ensembl chr 4:110,617,423...110,642,123 		JBrowse link
eyelid development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGFR epidermal growth factor receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9030684) Ensembl
MGI		 PMID:9030684 GO_REF:0000107 NCBI chr 7:55,019,017...55,211,628
Ensembl chr 7:55,019,017...55,211,628 		JBrowse link
G GRHL3 grainyhead like transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21262862) Ensembl
MGI		 PMID:21262862 GO_REF:0000107 NCBI chr 1:24,319,357...24,364,482
Ensembl chr 1:24,199,558...24,364,482 		JBrowse link
G HDAC1 histone deacetylase 1 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:32,292,083...32,333,626
Ensembl chr 1:32,292,083...32,333,635 		JBrowse link
G HDAC2 histone deacetylase 2 involved_in ISS (PMID:21093383) BHF-UCL PMID:21093383 NCBI chr 6:113,933,028...113,971,148
Ensembl chr 6:113,933,028...114,011,308 		JBrowse link
G INHBA inhibin subunit beta A involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:41,685,114...41,705,406
Ensembl chr 7:41,667,168...41,705,834 		JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:25224220) MGI PMID:25224220 NCBI chr 1:58,780,791...58,784,047
Ensembl chr 1:58,776,845...58,784,048 		JBrowse link
G KMT2C lysine methyltransferase 2C acts_upstream_of_or_within ISO (PMID:17021013) MGI PMID:17021013 NCBI chr 7:152,134,925...152,436,003
Ensembl chr 7:152,134,922...152,436,644 		JBrowse link
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 acts_upstream_of_or_within ISO (PMID:23201579), (PMID:25224220) MGI PMID:23201579 PMID:25224220 NCBI chr 5:56,815,549...56,896,152
Ensembl chr 5:56,815,549...56,896,152 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:98,944,442...98,952,100
Ensembl chr 8:98,944,403...98,952,104 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:42,456,757...42,589,746
Ensembl chr12:42,456,757...42,590,355 		JBrowse link
G SOS1 SOS Ras/Rac guanine nucleotide exchange factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9030684) Ensembl
MGI		 PMID:9030684 GO_REF:0000107 NCBI chr 2:38,981,549...39,124,868
Ensembl chr 2:38,962,206...39,124,345 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:5,692,384...5,701,385
Ensembl chr 2:5,692,384...5,701,385 		JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20047077) Ensembl
MGI		 PMID:20047077 GO_REF:0000107 NCBI chr 6:43,171,269...43,181,506
Ensembl chr 6:43,171,269...43,181,506 		JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in IMP (PMID:17273977) DFLAT PMID:17273977 NCBI chr15:74,179,466...74,212,259
Ensembl chr15:74,179,466...74,212,267 		JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:10,396,677...10,419,659
Ensembl chr 6:10,393,186...10,419,659 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in IMP (PMID:17070479) BHF-UCL PMID:17070479 NCBI chr 7:19,113,047...19,117,636
Ensembl chr 7:19,020,991...19,117,636 		JBrowse link
hyaloid vascular plexus regression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DRD2 dopamine receptor D2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr11:113,409,605...113,475,398
Ensembl chr11:113,409,605...113,475,691 		JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr13:28,300,346...28,495,128
Ensembl chr13:28,300,346...28,495,145 		JBrowse link
G NINJ1 ninjurin 1 acts_upstream_of_or_within ISO (PMID:19557008) MGI PMID:19557008 NCBI chr 9:93,121,496...93,134,251
Ensembl chr 9:93,121,496...93,134,251 		JBrowse link
G OPN4 opsin 4 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:86,654,547...86,666,460
Ensembl chr10:86,654,518...86,666,460 		JBrowse link
G OPN5 opsin 5 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:47,782,032...47,826,381
Ensembl chr 6:47,781,982...47,832,780 		JBrowse link
G SLC17A6 solute carrier family 17 member 6 involved_in ISS UniProt GO_REF:0000024 NCBI chr11:22,338,381...22,379,503
Ensembl chr11:22,338,381...22,379,503 		JBrowse link
G SLC6A3 solute carrier family 6 member 3 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:1,392,794...1,445,440
Ensembl chr 5:1,392,794...1,445,440 		JBrowse link
G TH tyrosine hydroxylase involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr11:2,163,929...2,171,815
Ensembl chr11:2,163,929...2,171,815 		JBrowse link
iris morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXE3 forkhead box E3 involved_in ISS
IEA		 (PMID:17064680) UniProt
Ensembl		 PMID:17064680 GO_REF:0000107 NCBI chr 1:47,416,285...47,418,052
Ensembl chr 1:47,416,285...47,418,052 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22627278) Ensembl
MGI		 PMID:22627278 GO_REF:0000107 NCBI chr14:61,695,513...61,748,258
Ensembl chr14:61,695,513...61,748,259 		JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,929,324...113,977,869
Ensembl chr 1:113,929,324...113,977,869 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:139,561,570...139,777,998
Ensembl chr 7:139,561,570...139,777,998 		JBrowse link
G PAX6 paired box 6 involved_in IMP (PMID:7550230) DFLAT PMID:7550230 NCBI chr11:31,789,026...31,817,961
Ensembl chr11:31,784,779...31,817,961 		JBrowse link
G PITX2 paired like homeodomain 2 involved_in IMP (PMID:9437321) BHF-UCL PMID:9437321 NCBI chr 4:110,617,423...110,642,123
Ensembl chr 4:110,617,423...110,642,123 		JBrowse link
G VHL von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO (PMID:22627278) MGI PMID:22627278 NCBI chr 3:10,141,778...10,153,667
Ensembl chr 3:10,141,778...10,153,676 		JBrowse link
G WNT2 Wnt family member 2 involved_in ISS (PMID:16258938) BHF-UCL PMID:16258938 NCBI chr 7:117,275,451...117,323,058
Ensembl chr 7:117,275,451...117,323,152 		JBrowse link
G WNT2B Wnt family member 2B involved_in ISS (PMID:16258938) BHF-UCL PMID:16258938 NCBI chr 1:112,466,541...112,530,165
Ensembl chr 1:112,466,541...112,530,165 		JBrowse link
G WNT9A Wnt family member 9A involved_in ISS (PMID:16258938) BHF-UCL PMID:16258938 NCBI chr 1:227,918,656...227,947,932
Ensembl chr 1:227,918,656...227,947,932 		JBrowse link
lens development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27687499) MGI
Ensembl		 PMID:27687499 GO_REF:0000107 NCBI chr 3:64,515,654...64,688,000
Ensembl chr 3:64,515,654...64,688,000 		JBrowse link
G BIRC7 baculoviral IAP repeat containing 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26218911) Ensembl
MGI		 PMID:26218911 GO_REF:0000107 NCBI chr20:63,235,905...63,240,495
Ensembl chr20:63,235,883...63,240,495 		JBrowse link
G CASP6 caspase 6 ISO RGD PMID:15161922 RGD:2301319 NCBI chr 4:109,664,388...109,709,767
Ensembl chr 4:109,688,622...109,703,583 		JBrowse link
G CDK2 cyclin dependent kinase 2 ISO RGD PMID:10620399 RGD:724665 NCBI chr12:55,966,830...55,972,789
Ensembl chr12:55,966,781...55,972,789 		JBrowse link
G CDK4 cyclin dependent kinase 4 ISO RGD PMID:10620399 RGD:724665 NCBI chr12:57,747,727...57,752,310
Ensembl chr12:57,747,727...57,756,013 		JBrowse link
G CDON cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19754878) Ensembl
MGI		 PMID:19754878 GO_REF:0000107 NCBI chr11:125,956,821...126,063,352
Ensembl chr11:125,955,796...126,063,335 		JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:16439475), (PMID:9023351)
(PMID:11687536)		 RGD
MGI
GO_Central		 PMID:8187157 PMID:9023351 PMID:11687536 PMID:16439475 GO_REF:0000033 RGD:1600991 NCBI chr21:43,169,008...43,172,810
Ensembl chr21:43,169,008...43,172,810 		JBrowse link
G CRYAA2 crystallin alpha A2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr21:6,499,203...6,564,489
Ensembl chr21:43,169,008...43,172,810 		JBrowse link
G CRYAB crystallin alpha B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16439475) Ensembl
MGI		 PMID:16439475 GO_REF:0000107 NCBI chr11:111,908,564...111,923,740
Ensembl chr11:111,908,564...111,923,722 		JBrowse link
G CRYBA1 crystallin beta A1 involved_in ISO
IBA
IEA		 RGD
GO_Central
Ensembl		 PMID:2753045 GO_REF:0000033 GO_REF:0000107 RGD:1298814 NCBI chr17:29,246,859...29,254,494
Ensembl chr17:29,246,859...29,254,494 		JBrowse link
G CRYBA2 crystallin beta A2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:21212184) Ensembl
MGI
GO_Central		 PMID:21212184 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:218,990,190...218,993,422
Ensembl chr 2:218,990,189...218,993,422 		JBrowse link
G CRYBA4 crystallin beta A4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr22:26,590,220...26,630,669
Ensembl chr22:26,621,963...26,630,669 		JBrowse link
G CRYBB1 crystallin beta B1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr22:26,599,278...26,618,027
Ensembl chr22:26,599,278...26,618,027 		JBrowse link
G CRYBB2 crystallin beta B2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr22:25,211,661...25,231,869
Ensembl chr22:25,212,564...25,231,870 		JBrowse link
G CRYBB3 crystallin beta B3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr22:25,199,858...25,207,359
Ensembl chr22:25,199,858...25,207,359 		JBrowse link
G CRYBG3 crystallin beta-gamma domain containing 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:97,822,011...97,944,984
Ensembl chr 3:97,822,011...97,944,984 		JBrowse link
G CRYGA crystallin gamma A acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:6510713), (PMID:6877261)
(PMID:7088001), (PMID:8034315)		 RGD
MGI
GO_Central
Ensembl		 PMID:2338125 PMID:6510713 PMID:6877261 PMID:7088001 PMID:8034315 GO_REF:0000033 GO_REF:0000107 RGD:2303725 NCBI chr 2:208,160,740...208,163,589
Ensembl chr 2:208,160,740...208,163,589 		JBrowse link
G CRYGB crystallin gamma B acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:18172107)
(PMID:12426373), (PMID:8626090)		 RGD
MGI
GO_Central
Ensembl		 PMID:2338125 PMID:8626090 PMID:12426373 PMID:18172107 GO_REF:0000033 GO_REF:0000107 RGD:2303725 NCBI chr 2:208,142,573...208,146,158
Ensembl chr 2:208,142,573...208,146,158 		JBrowse link
G CRYGC crystallin gamma C involved_in ISO
IBA		 RGD
GO_Central		 PMID:2338125 GO_REF:0000033 RGD:2303725 NCBI chr 2:208,128,137...208,129,828
Ensembl chr 2:208,128,137...208,129,828 		JBrowse link
G CRYGD crystallin gamma D acts_upstream_of_or_within
involved_in		 ISO
IBA
ISS		 (PMID:10704279)
(PMID:17652744)		 RGD
MGI
GO_Central
UniProt		 PMID:2338125 PMID:10704279 PMID:17652744 GO_REF:0000024 GO_REF:0000033 RGD:2303725 NCBI chr 2:208,121,607...208,124,524
Ensembl chr 2:208,121,607...208,124,524 		JBrowse link
G CRYGN crystallin gamma N involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:151,428,832...151,440,813
Ensembl chr 7:151,428,832...151,440,813 		JBrowse link
G CRYGS crystallin gamma S involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:6877261), (PMID:8034315) Ensembl
MGI
GO_Central		 PMID:6877261 PMID:8034315 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:186,538,443...186,544,380
Ensembl chr 3:186,538,441...186,546,702 		JBrowse link
G CTNS cystinosin, lysosomal cystine transporter involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21897743) Ensembl
MGI		 PMID:21897743 GO_REF:0000107 NCBI chr17:3,636,459...3,663,103
Ensembl chr17:3,636,459...3,663,103 		JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14645510) Ensembl
MGI		 PMID:14645510 GO_REF:0000107 NCBI chr 3:197,042,560...197,299,321
Ensembl chr 3:197,042,560...197,299,330 		JBrowse link
G FAT1 FAT atypical cadherin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:186,587,794...186,726,696
Ensembl chr 4:186,587,794...186,726,722 		JBrowse link
G FOXE3 forkhead box E3 involved_in IEA
ISS
IMP		 (PMID:17064680)
(PMID:27218149)		 Ensembl
UniProt		 PMID:17064680 PMID:27218149 GO_REF:0000107 NCBI chr 1:47,416,285...47,418,052
Ensembl chr 1:47,416,285...47,418,052 		JBrowse link
G FRS2 fibroblast growth factor receptor substrate 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23136392) Ensembl
MGI		 PMID:23136392 GO_REF:0000107 NCBI chr12:69,470,388...69,579,793
Ensembl chr12:69,470,349...69,579,793 		JBrowse link
G GATA3 GATA binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19623612) Ensembl
MGI		 PMID:19623612 GO_REF:0000107 NCBI chr10:8,045,333...8,075,198
Ensembl chr10:8,045,378...8,075,198 		JBrowse link
G GJA1 gap junction protein alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9620080) Ensembl
MGI		 PMID:9620080 GO_REF:0000107 NCBI chr 6:121,435,646...121,449,727
Ensembl chr 6:121,435,595...121,449,727 		JBrowse link
G GJA8 gap junction protein alpha 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:6877261) Ensembl
MGI		 PMID:6877261 GO_REF:0000107 NCBI chr 1:147,902,795...147,914,486
Ensembl chr 1:147,902,795...147,909,269 		JBrowse link
G GJE1 gap junction protein epsilon 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18385072) Ensembl
MGI		 PMID:18385072 GO_REF:0000107 NCBI chr 6:142,132,925...142,135,358
Ensembl chr 6:142,132,925...142,135,358 		JBrowse link
G LENEP lens epithelial protein involved_in TAS (PMID:10655141) PINC PMID:10655141 NCBI chr 1:154,993,586...154,994,321
Ensembl chr 1:154,993,586...154,994,315 		JBrowse link
G LIM2 lens intrinsic membrane protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:6510713), (PMID:6877261), (PMID:7088001), (PMID:8812411) Ensembl
MGI		 PMID:6510713 PMID:6877261 PMID:7088001 PMID:8812411 GO_REF:0000107 NCBI chr19:51,379,909...51,387,974
Ensembl chr19:51,379,909...51,387,974 		JBrowse link
G MAF MAF bZIP transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10383433)
(PMID:12835653)
(PMID:10603348)		 Ensembl
MGI		 PMID:10383433 PMID:10603348 PMID:12835653 GO_REF:0000107 NCBI chr16:79,202,622...79,600,737
Ensembl chr16:79,585,843...79,600,737 		JBrowse link
G MED1 mediator complex subunit 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:39,404,285...39,451,263
Ensembl chr17:39,404,285...39,451,272 		JBrowse link
G MIP major intrinsic protein of lens fiber involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7333462) Ensembl
MGI		 PMID:7333462 GO_REF:0000107 NCBI chr12:56,449,502...56,456,553
Ensembl chr12:56,449,502...56,469,166 		JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15716406) Ensembl
MGI		 PMID:15716406 GO_REF:0000107 NCBI chr  X:43,948,776...43,973,390
Ensembl chr  X:43,948,776...43,973,395 		JBrowse link
G NHS NHS actin remodeling regulator involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:8282045) Ensembl
MGI
GO_Central		 PMID:8282045 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:17,375,200...17,735,994
Ensembl chr  X:17,375,200...17,735,994 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:6877261) Ensembl
MGI		 PMID:6877261 GO_REF:0000107 NCBI chr11:31,789,026...31,817,961
Ensembl chr11:31,784,779...31,817,961 		JBrowse link
G PDS5A PDS5 cohesin associated factor A acts_upstream_of_or_within ISO (PMID:19412548) MGI PMID:19412548 NCBI chr 4:39,822,863...39,977,911
Ensembl chr 4:39,822,863...39,977,956 		JBrowse link
G PDS5B PDS5 cohesin associated factor B acts_upstream_of_or_within ISO (PMID:19412548) MGI PMID:19412548 NCBI chr13:32,586,452...32,778,019
Ensembl chr13:32,586,452...32,778,019 		JBrowse link
G PITX3 paired like homeodomain 3 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:102,230,189...102,241,512
Ensembl chr10:102,230,189...102,241,512 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEP (PMID:8812486) BHF-UCL PMID:8812486 NCBI chr 1:213,983,151...214,041,510
Ensembl chr 1:213,983,181...214,041,510 		JBrowse link
G PYGO2 pygopus family PHD finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17425782) Ensembl
MGI		 PMID:17425782 GO_REF:0000107 NCBI chr 1:154,957,026...154,961,782
Ensembl chr 1:154,957,026...154,963,853 		JBrowse link
G SIX3 SIX homeobox 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:44,941,702...44,946,071
Ensembl chr 2:44,941,702...44,946,071 		JBrowse link
G SIX5 SIX homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10802667)
(PMID:10802668)		 Ensembl
MGI		 PMID:10802667 PMID:10802668 GO_REF:0000107 NCBI chr19:45,764,785...45,769,252
Ensembl chr19:45,764,785...45,769,252 		JBrowse link
G SLITRK6 SLIT and NTRK like family member 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23543054) Ensembl
MGI		 PMID:23543054 GO_REF:0000107 NCBI chr13:85,792,790...85,799,419
Ensembl chr13:85,792,790...85,806,683 		JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24239381) Ensembl
MGI		 PMID:24239381 GO_REF:0000107 NCBI chr20:435,480...462,533
Ensembl chr20:423,596...462,566 		JBrowse link
G TBC1D32 TBC1 domain family member 32 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20159594) Ensembl
MGI		 PMID:20159594 GO_REF:0000107 NCBI chr 6:121,079,494...121,334,729
Ensembl chr 6:121,079,494...121,334,745 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11641223) Ensembl
MGI		 PMID:11641223 GO_REF:0000107 NCBI chr 9:99,103,647...99,154,192
Ensembl chr 9:99,104,038...99,154,192 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11641223) Ensembl
MGI		 PMID:11641223 GO_REF:0000107 NCBI chr 3:30,606,356...30,694,142
Ensembl chr 3:30,606,478...30,694,249 		JBrowse link
G UNC45B unc-45 myosin chaperone B involved_in ISS UniProt GO_REF:0000024 NCBI chr17:35,147,817...35,189,345
Ensembl chr17:35,147,817...35,189,345 		JBrowse link
G WNT2 Wnt family member 2 involved_in ISS (PMID:16258938) BHF-UCL PMID:16258938 NCBI chr 7:117,275,451...117,323,058
Ensembl chr 7:117,275,451...117,323,152 		JBrowse link
G WNT2B Wnt family member 2B involved_in ISS (PMID:16258938) BHF-UCL PMID:16258938 NCBI chr 1:112,466,541...112,530,165
Ensembl chr 1:112,466,541...112,530,165 		JBrowse link
G WNT5A Wnt family member 5A involved_in ISS (PMID:16258938) BHF-UCL PMID:16258938 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539 		JBrowse link
lens fiber cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BFSP1 beaded filament structural protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:15037121) Ensembl
MGI
GO_Central		 PMID:15037121 GO_REF:0000033 GO_REF:0000107 NCBI chr20:17,493,905...17,569,220
Ensembl chr20:17,493,905...17,569,220 		JBrowse link
G BFSP2 beaded filament structural protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15037121), (PMID:17065509) Ensembl
MGI		 PMID:15037121 PMID:17065509 GO_REF:0000107 NCBI chr 3:133,400,056...133,475,208
Ensembl chr 3:133,400,056...133,475,222 		JBrowse link
G CRYGB crystallin gamma B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18172107) Ensembl
MGI		 PMID:18172107 GO_REF:0000107 NCBI chr 2:208,142,573...208,146,158
Ensembl chr 2:208,142,573...208,146,158 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:23136392)
(PMID:18455718)		 MGI PMID:18455718 PMID:23136392 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:18455718) MGI PMID:18455718 NCBI chr 4:1,793,293...1,808,867
Ensembl chr 4:1,793,293...1,808,872 		JBrowse link
G FRS2 fibroblast growth factor receptor substrate 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23136392) Ensembl
MGI		 PMID:23136392 GO_REF:0000107 NCBI chr12:69,470,388...69,579,793
Ensembl chr12:69,470,349...69,579,793 		JBrowse link
G SMARCA4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 acts_upstream_of_or_within ISO (PMID:21118511) MGI PMID:21118511 NCBI chr19:10,961,030...11,062,273
Ensembl chr19:10,960,932...11,079,426 		JBrowse link
G TMOD1 tropomodulin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:97,501,180...97,601,743
Ensembl chr 9:97,501,180...97,601,743 		JBrowse link
G VIM vimentin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15037121) Ensembl
MGI		 PMID:15037121 GO_REF:0000107 NCBI chr10:17,228,241...17,237,593
Ensembl chr10:17,228,241...17,237,593 		JBrowse link
G WNT5B Wnt family member 5B involved_in ISS (PMID:16258938) BHF-UCL PMID:16258938 NCBI chr12:1,617,056...1,647,212
Ensembl chr12:1,529,891...1,647,212 		JBrowse link
G WNT7A Wnt family member 7A involved_in ISS (PMID:16258938) BHF-UCL PMID:16258938 NCBI chr 3:13,816,258...13,880,071
Ensembl chr 3:13,816,258...13,880,071 		JBrowse link
G WNT7B Wnt family member 7B involved_in ISS (PMID:16258938) BHF-UCL PMID:16258938 NCBI chr22:45,920,366...45,977,162
Ensembl chr22:45,920,366...45,977,162 		JBrowse link
lens fiber cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRYGD crystallin gamma D acts_upstream_of_or_within
involved_in		 ISO
ISS		 (PMID:17652744) RGD
MGI
UniProt		 PMID:8575616 PMID:17652744 GO_REF:0000024 RGD:1601018 NCBI chr 2:208,121,607...208,124,524
Ensembl chr 2:208,121,607...208,124,524 		JBrowse link
G FZR1 fizzy and cell division cycle 20 related 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17215516) Ensembl
MGI		 PMID:17215516 GO_REF:0000107 NCBI chr19:3,506,311...3,538,334
Ensembl chr19:3,506,311...3,538,334 		JBrowse link
G HSF4 heat shock transcription factor 4 involved_in ISS UniProt GO_REF:0000024 NCBI chr16:67,163,761...67,169,941
Ensembl chr16:67,164,681...67,169,945 		JBrowse link
G KDM5B lysine demethylase 5B involved_in ISO
IEA		 RGD
Ensembl		 PMID:24142921 GO_REF:0000107 RGD:9587771 NCBI chr 1:202,724,495...202,808,421
Ensembl chr 1:202,724,495...202,808,487 		JBrowse link
G MAF MAF bZIP transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:10383433)
(PMID:12835653)		 Ensembl
MGI
GO_Central		 PMID:10383433 PMID:12835653 GO_REF:0000033 GO_REF:0000107 NCBI chr16:79,202,622...79,600,737
Ensembl chr16:79,585,843...79,600,737 		JBrowse link
G NF2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:29,603,556...29,698,600
Ensembl chr22:29,603,553...29,698,598 		JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:23136392) MGI PMID:23136392 NCBI chr15:87,859,751...88,256,739
Ensembl chr15:87,859,751...88,256,791 		JBrowse link
G PITX3 paired like homeodomain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:102,230,189...102,241,512
Ensembl chr10:102,230,189...102,241,512 		JBrowse link
G PLAAT1 phospholipase A and acyltransferase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:193,240,606...193,281,426
Ensembl chr 3:193,241,128...193,277,738 		JBrowse link
G PLAAT3 phospholipase A and acyltransferase 3 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr11:63,574,462...63,616,927
Ensembl chr11:63,573,195...63,616,883 		JBrowse link
G SIX3 SIX homeobox 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:44,941,702...44,946,071
Ensembl chr 2:44,941,702...44,946,071 		JBrowse link
G SKIL SKI like proto-oncogene involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17215516) Ensembl
MGI		 PMID:17215516 GO_REF:0000107 NCBI chr 3:170,357,715...170,396,849
Ensembl chr 3:170,357,342...170,396,835 		JBrowse link
G SLC7A11 solute carrier family 7 member 11 involved_in ISO
IEA		 RGD
Ensembl		 PMID:16043861 GO_REF:0000107 RGD:2315033 NCBI chr 4:138,164,097...138,312,671
Ensembl chr 4:138,164,097...138,242,349 		JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17215516) Ensembl
MGI		 PMID:17215516 GO_REF:0000107 NCBI chr15:67,065,602...67,195,169
Ensembl chr15:67,063,763...67,195,173 		JBrowse link
G TDRD7 tudor domain containing 7 involved_in IMP
IBA		 (PMID:21436445) UniProt
GO_Central		 PMID:21436445 GO_REF:0000033 NCBI chr 9:97,412,096...97,496,125
Ensembl chr 9:97,412,096...97,496,125 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17215516) Ensembl
MGI		 PMID:17215516 GO_REF:0000107 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922 		JBrowse link
lens fiber cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI2 abl interactor 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:203,328,394...203,432,169
Ensembl chr 2:203,328,280...203,447,728 		JBrowse link
G ATF4 activating transcription factor 4 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr22:39,520,559...39,522,686
Ensembl chr22:39,519,695...39,522,686 		JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within ISO (PMID:16799046)
(PMID:18056999)		 MGI PMID:16799046 PMID:18056999 NCBI chr21:43,169,008...43,172,810
Ensembl chr21:43,169,008...43,172,810 		JBrowse link
G CRYGB crystallin gamma B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12426373), (PMID:8626090) Ensembl
MGI		 PMID:8626090 PMID:12426373 GO_REF:0000107 NCBI chr 2:208,142,573...208,146,158
Ensembl chr 2:208,142,573...208,146,158 		JBrowse link
G EPHA2 EPH receptor A2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:16,124,337...16,156,069
Ensembl chr 1:16,124,337...16,156,069 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA
IEP		 (PMID:11850194) Ensembl
BHF-UCL		 PMID:11850194 GO_REF:0000107 NCBI chr 1:213,983,151...214,041,510
Ensembl chr 1:213,983,181...214,041,510 		JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24239381) Ensembl
MGI		 PMID:24239381 GO_REF:0000107 NCBI chr20:435,480...462,533
Ensembl chr20:423,596...462,566 		JBrowse link
lens induction in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9851982) Ensembl
MGI		 PMID:9851982 GO_REF:0000107 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761 		JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,929,324...113,977,869
Ensembl chr 1:113,929,324...113,977,869 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:139,561,570...139,777,998
Ensembl chr 7:139,561,570...139,777,998 		JBrowse link
G POU2F1 POU class 2 homeobox 1 acts_upstream_of_or_within ISO (PMID:17140559) MGI PMID:17140559 NCBI chr 1:167,220,885...167,427,345
Ensembl chr 1:167,220,876...167,427,345 		JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within ISO (PMID:17066077) MGI PMID:17066077 NCBI chr 2:44,941,702...44,946,071
Ensembl chr 2:44,941,702...44,946,071 		JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:17140559) MGI PMID:17140559 NCBI chr 3:181,711,925...181,714,436
Ensembl chr 3:181,711,925...181,714,436 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:10571739) MGI PMID:10571739 NCBI chr 6:10,396,677...10,419,659
Ensembl chr 6:10,393,186...10,419,659 		JBrowse link
lens morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAR3 BCAR3 adaptor protein, NSP family member involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19365570) Ensembl
MGI		 PMID:19365570 GO_REF:0000107 NCBI chr 1:93,561,741...93,848,151
Ensembl chr 1:93,561,741...93,847,150 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18653562) Ensembl
MGI		 PMID:18653562 GO_REF:0000107 NCBI chr 6:139,371,807...139,374,648
Ensembl chr 6:139,371,807...139,374,648 		JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within ISO (PMID:16799046)
(PMID:8812430)		 MGI PMID:8812430 PMID:16799046 NCBI chr21:43,169,008...43,172,810
Ensembl chr21:43,169,008...43,172,810 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16102745) Ensembl
MGI		 PMID:16102745 GO_REF:0000107 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:11290300) MGI PMID:11290300 NCBI chr 4:1,793,293...1,808,867
Ensembl chr 4:1,793,293...1,808,872 		JBrowse link
G LCTL lactase like involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:66,547,532...66,565,998
Ensembl chr15:66,547,179...66,565,998 		JBrowse link
G MEIS1 Meis homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14713950) Ensembl
MGI		 PMID:14713950 GO_REF:0000107 NCBI chr 2:66,435,125...66,573,869
Ensembl chr 2:66,433,452...66,573,869 		JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728677) Ensembl
MGI		 PMID:15728677 GO_REF:0000107 NCBI chr11:119,638,098...119,729,200
Ensembl chr11:119,623,408...119,729,200 		JBrowse link
G NECTIN3 nectin cell adhesion molecule 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728677) Ensembl
MGI		 PMID:15728677 GO_REF:0000107 NCBI chr 3:111,071,816...111,194,170
Ensembl chr 3:111,070,071...111,275,563 		JBrowse link
G PITX3 paired like homeodomain 3 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:102,230,189...102,241,512
Ensembl chr10:102,230,189...102,241,512 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:213,983,151...214,041,510
Ensembl chr 1:213,983,181...214,041,510 		JBrowse link
G SHROOM2 shroom family member 2 involved_in ISS HGNC-UCL GO_REF:0000024 NCBI chr  X:9,786,429...9,949,443
Ensembl chr  X:9,786,429...9,949,443 		JBrowse link
G SKI SKI proto-oncogene involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:17003410) BHF-UCL
MGI		 PMID:17003410 GO_REF:0000024 NCBI chr 1:2,228,319...2,310,213
Ensembl chr 1:2,227,388...2,310,213 		JBrowse link
G SOX1 SRY-box transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9512512) Ensembl
MGI		 PMID:9512512 GO_REF:0000107 NCBI chr13:112,067,149...112,071,706
Ensembl chr13:112,067,149...112,071,706 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:5,692,384...5,701,385
Ensembl chr 2:5,692,384...5,701,385 		JBrowse link
G TDRD7 tudor domain containing 7 involved_in IMP
IBA		 (PMID:21436445) UniProt
GO_Central		 PMID:21436445 GO_REF:0000033 NCBI chr 9:97,412,096...97,496,125
Ensembl chr 9:97,412,096...97,496,125 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:18224708), (PMID:9918694) MGI PMID:9918694 PMID:18224708 NCBI chr 6:10,396,677...10,419,659
Ensembl chr 6:10,393,186...10,419,659 		JBrowse link
lens placode formation involved in camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FRS2 fibroblast growth factor receptor substrate 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15569927) Ensembl
MGI		 PMID:15569927 GO_REF:0000107 NCBI chr12:69,470,388...69,579,793
Ensembl chr12:69,470,349...69,579,793 		JBrowse link
G PROX1 prospero homeobox 1 involved_in ISS
IEA		 (PMID:11850194) BHF-UCL
Ensembl		 PMID:11850194 GO_REF:0000107 NCBI chr 1:213,983,151...214,041,510
Ensembl chr 1:213,983,181...214,041,510 		JBrowse link
negative regulation of amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASZ1 castor zinc finger 1 acts_upstream_of_or_within ISO (PMID:25654255) MGI PMID:25654255 NCBI chr 1:10,636,604...10,796,646
Ensembl chr 1:10,636,604...10,796,650 		JBrowse link
G GDF11 growth differentiation factor 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15976303) Ensembl
MGI		 PMID:15976303 GO_REF:0000107 NCBI chr12:55,743,122...55,757,264
Ensembl chr12:55,743,122...55,757,264 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16038893) Ensembl
MGI		 PMID:16038893 GO_REF:0000107 NCBI chr 3:194,136,148...194,138,732
Ensembl chr 3:194,136,148...194,138,732 		JBrowse link
G POU4F2 POU class 4 homeobox 2 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:146,638,893...146,642,474
Ensembl chr 4:146,638,893...146,642,474 		JBrowse link
negative regulation of lens fiber cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXE3 forkhead box E3 involved_in ISS
IEA		 (PMID:16199865) UniProt
Ensembl		 PMID:16199865 GO_REF:0000107 NCBI chr 1:47,416,285...47,418,052
Ensembl chr 1:47,416,285...47,418,052 		JBrowse link
G SPRED1 sprouty related EVH1 domain containing 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:38,252,836...38,357,249
Ensembl chr15:38,252,836...38,357,249 		JBrowse link
G SPRED2 sprouty related EVH1 domain containing 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:65,307,175...65,432,599
Ensembl chr 2:65,310,851...65,432,637 		JBrowse link
G SPRED3 sprouty related EVH1 domain containing 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr19:38,388,697...38,399,587
Ensembl chr19:38,388,421...38,399,587 		JBrowse link
G SPRY1 sprouty RTK signaling antagonist 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:123,396,795...123,403,760
Ensembl chr 4:123,396,795...123,403,760 		JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:80,335,976...80,341,126
Ensembl chr13:80,335,976...80,341,126 		JBrowse link
negative regulation of retinal cone cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASZ1 castor zinc finger 1 acts_upstream_of_or_within ISO (PMID:25654255) MGI PMID:25654255 NCBI chr 1:10,636,604...10,796,646
Ensembl chr 1:10,636,604...10,796,650 		JBrowse link
negative regulation of vasculature development involved in avascular cornea development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGPTL7 angiopoietin like 7 involved_in IMP (PMID:25622036) UniProt PMID:25622036 NCBI chr 1:11,189,355...11,195,981
Ensembl chr 1:11,189,355...11,195,981 		JBrowse link
neural retina development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTL6A actin like 6A involved_in IEP (PMID:18816825) BHF-UCL PMID:18816825 NCBI chr 3:179,562,926...179,588,407
Ensembl chr 3:179,562,886...179,588,407 		JBrowse link
G ATOH7 atonal bHLH transcription factor 7 acts_upstream_of_or_within
involved_in		 IMP
IEA		 (PMID:21441919) MGI
InterPro
Ensembl		 PMID:21441919 GO_REF:0000002 GO_REF:0000107 NCBI chr10:68,230,595...68,232,113
Ensembl chr10:68,230,595...68,232,113 		JBrowse link
G ATP2B1 ATPase plasma membrane Ca2+ transporting 1 ISO RGD PMID:16079002 RGD:2317729 NCBI chr12:89,588,049...89,709,366
Ensembl chr12:89,588,049...89,709,366 		JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:16079002 GO_REF:0000107 RGD:2317729 NCBI chr 3:10,324,023...10,708,007
Ensembl chr 3:10,324,023...10,708,007 		JBrowse link
G ATP2B3 ATPase plasma membrane Ca2+ transporting 3 ISO RGD PMID:16079002 RGD:2317729 NCBI chr  X:153,517,642...153,582,929
Ensembl chr  X:153,517,642...153,582,939 		JBrowse link
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO
IEA		 RGD
Ensembl		 PMID:16079002 GO_REF:0000107 RGD:2317729 NCBI chr 1:203,626,832...203,744,081
Ensembl chr 1:203,626,832...203,744,081 		JBrowse link
G BSG basigin (Ok blood group) involved_in ISS UniProt GO_REF:0000024 NCBI chr19:571,283...583,493
Ensembl chr19:571,277...583,494 		JBrowse link
G CASP2 caspase 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:9809666 GO_REF:0000107 RGD:4107085 NCBI chr 7:143,288,351...143,307,696
Ensembl chr 7:143,288,215...143,307,696 		JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit involved_in ISO
IEA		 RGD
Ensembl		 PMID:20589906 GO_REF:0000107 RGD:405650605 NCBI chr14:75,278,828...75,282,230
Ensembl chr14:75,278,826...75,283,190 		JBrowse link
G GPM6A glycoprotein M6A involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:175,632,937...176,002,393
Ensembl chr 4:175,632,934...176,002,664 		JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15716406) Ensembl
MGI		 PMID:15716406 GO_REF:0000107 NCBI chr  X:43,948,776...43,973,390
Ensembl chr  X:43,948,776...43,973,395 		JBrowse link
G OPTN optineurin ISO RGD PMID:17687037 RGD:7800681 NCBI chr10:13,100,082...13,138,308
Ensembl chr10:13,099,449...13,138,308 		JBrowse link
G PER1 period circadian regulator 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:20589906 GO_REF:0000107 RGD:405650605 NCBI chr17:8,140,472...8,152,404
Ensembl chr17:8,140,467...8,156,506 		JBrowse link
G PER2 period circadian regulator 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:20589906 GO_REF:0000107 RGD:405650605 NCBI chr 2:238,244,044...238,300,065
Ensembl chr 2:238,244,044...238,290,102 		JBrowse link
G PSEN1 presenilin 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:12401445 GO_REF:0000107 RGD:729595 NCBI chr14:73,136,417...73,223,691
Ensembl chr14:73,136,418...73,223,691 		JBrowse link
G RAB11FIP4 RAB11 family interacting protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:31,391,675...31,538,211
Ensembl chr17:31,391,675...31,538,211 		JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 involved_in ISO
IEA		 RGD
Ensembl		 PMID:2631392 GO_REF:0000107 RGD:9585660 NCBI chr 1:68,428,822...68,449,954
Ensembl chr 1:68,428,822...68,451,103 		JBrowse link
G SLC17A6 solute carrier family 17 member 6 ISO RGD PMID:18482716 RGD:9999162 NCBI chr11:22,338,381...22,379,503
Ensembl chr11:22,338,381...22,379,503 		JBrowse link
G SLC17A7 solute carrier family 17 member 7 involved_in ISO
IEA		 RGD
Ensembl		 PMID:18482716 GO_REF:0000107 RGD:9999162 NCBI chr19:49,429,401...49,441,527
Ensembl chr19:49,429,401...49,442,360 		JBrowse link
G SLC17A8 solute carrier family 17 member 8 involved_in ISO
IEA		 RGD
Ensembl		 PMID:18482716 GO_REF:0000107 RGD:9999162 NCBI chr12:100,357,074...100,422,055
Ensembl chr12:100,357,074...100,422,055 		JBrowse link
G SMARCA4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 involved_in IEP (PMID:18816825) BHF-UCL PMID:18816825 NCBI chr19:10,961,030...11,062,273
Ensembl chr19:10,960,932...11,079,426 		JBrowse link
G SMARCD3 SWI/SNF related BAF chromatin remodeling complex subunit D3 involved_in IEP
IEA		 (PMID:18816825) BHF-UCL
Ensembl		 PMID:18816825 GO_REF:0000107 NCBI chr 7:151,238,780...151,277,149
Ensembl chr 7:151,238,764...151,277,896 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 1:218,345,336...218,444,619
Ensembl chr 1:218,345,336...218,444,619 		JBrowse link
G USP45 ubiquitin specific peptidase 45 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:99,432,325...99,517,846
Ensembl chr 6:99,432,325...99,521,728 		JBrowse link
optic cup formation involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID1A AT-rich interaction domain 1A acts_upstream_of_or_within ISO (PMID:23129809) MGI PMID:23129809 NCBI chr 1:26,696,015...26,782,104
Ensembl chr 1:26,693,236...26,782,104 		JBrowse link
G WNT16 Wnt family member 16 involved_in ISS (PMID:16258938) BHF-UCL PMID:16258938 NCBI chr 7:121,325,367...121,341,104
Ensembl chr 7:121,325,367...121,341,104 		JBrowse link
G WNT5A Wnt family member 5A involved_in ISS (PMID:16258938) BHF-UCL PMID:16258938 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539 		JBrowse link
optic cup morphogenesis involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (PMID:16611695) MGI PMID:16611695 NCBI chr 9:72,900,671...72,953,053
Ensembl chr 9:72,900,671...73,080,442 		JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16611695) Ensembl
MGI		 PMID:16611695 GO_REF:0000107 NCBI chr15:100,879,831...100,916,626
Ensembl chr15:100,861,924...100,916,626 		JBrowse link
G PAX2 paired box 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,396...100,829,944 		JBrowse link
optic cup structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TFAP2A transcription factor AP-2 alpha involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:10,396,677...10,419,659
Ensembl chr 6:10,393,186...10,419,659 		JBrowse link
optic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX3 SIX homeobox 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:44,941,702...44,946,071
Ensembl chr 2:44,941,702...44,946,071 		JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:10,396,677...10,419,659
Ensembl chr 6:10,393,186...10,419,659 		JBrowse link
positive regulation of amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLX1 distal-less homeobox 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:172,085,507...172,089,674
Ensembl chr 2:172,084,740...172,089,677 		JBrowse link
G DLX2 distal-less homeobox 2 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:172,099,438...172,102,900
Ensembl chr 2:172,099,438...172,102,900 		JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (PMID:18973577) MGI PMID:18973577 NCBI chr18:3,412,009...3,459,978
Ensembl chr18:3,411,608...3,459,978 		JBrowse link
G TGIF2 TGFB induced factor homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18926818) Ensembl
MGI		 PMID:18926818 GO_REF:0000107 NCBI chr20:36,573,464...36,593,950
Ensembl chr20:36,573,488...36,593,950 		JBrowse link
positive regulation of lens epithelial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXE3 forkhead box E3 involved_in ISS
IEA
IMP		 (PMID:16199865)
(PMID:22527307)		 UniProt
Ensembl		 PMID:16199865 PMID:22527307 GO_REF:0000107 NCBI chr 1:47,416,285...47,418,052
Ensembl chr 1:47,416,285...47,418,052 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:5,692,384...5,701,385
Ensembl chr 2:5,692,384...5,701,385 		JBrowse link
positive regulation of lens fiber cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF2 fibroblast growth factor 2 involved_in IDA (PMID:29501879) UniProt PMID:29501879 NCBI chr 4:122,826,682...122,898,236
Ensembl chr 4:122,826,682...122,898,236 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 involved_in ISO (PMID:16162653) UniProt PMID:16162653 NCBI chr 2:144,384,081...144,520,119
Ensembl chr 2:144,364,364...144,521,057 		JBrowse link
post-embryonic camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AL445238.1 keratin-associated protein 21-1 acts_upstream_of_or_within ISO (PMID:17151017) MGI PMID:17151017 NCBI chr13:63,832,361...63,833,053
Ensembl chr13:63,832,361...63,833,531 		JBrowse link
G BCL11B BCL11 transcription factor B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12717433) Ensembl
MGI		 PMID:12717433 GO_REF:0000107 NCBI chr14:99,169,287...99,272,197
Ensembl chr14:99,169,287...99,272,197 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18791178) Ensembl
MGI		 PMID:18791178 GO_REF:0000107 NCBI chr 2:207,762,598...207,769,906
Ensembl chr 2:207,762,598...207,769,906 		JBrowse link
G KLF4 KLF transcription factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17060454) Ensembl
MGI		 PMID:17060454 GO_REF:0000107 NCBI chr 9:107,484,852...107,489,769
Ensembl chr 9:107,484,852...107,490,482 		JBrowse link
G MUC4 mucin 4, cell surface associated ISO RGD PMID:11120573 RGD:2303744 NCBI chr 3:195,746,771...195,811,929
Ensembl chr 3:195,746,765...195,811,973 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:10229225) BHF-UCL
MGI
Ensembl		 PMID:10229225 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:43,770,211...43,786,487
Ensembl chr 6:43,770,184...43,786,487 		JBrowse link
post-embryonic camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAK1 BCL2 antagonist/killer 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15955981) Ensembl
MGI		 PMID:15955981 GO_REF:0000107 NCBI chr 6:33,572,552...33,580,276
Ensembl chr 6:33,572,547...33,580,293 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15955981) Ensembl
MGI		 PMID:15955981 GO_REF:0000107 NCBI chr19:48,954,875...48,961,798
Ensembl chr19:48,954,815...48,961,798 		JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (PMID:22426483) MGI PMID:22426483 NCBI chr13:28,300,346...28,495,128
Ensembl chr13:28,300,346...28,495,145 		JBrowse link
G HMGN1 high mobility group nucleosome binding domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16466397) Ensembl
MGI		 PMID:16466397 GO_REF:0000107 NCBI chr21:39,342,315...39,349,088
Ensembl chr21:39,342,315...39,349,647 		JBrowse link
G KDR kinase insert domain receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22426483) Ensembl
MGI		 PMID:22426483 GO_REF:0000107 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595 		JBrowse link
G MIR23A microRNA 23a acts_upstream_of_or_within ISO (PMID:24101522) MGI PMID:24101522 NCBI chr19:13,836,587...13,836,659
Ensembl chr19:13,836,587...13,836,659 		JBrowse link
post-embryonic retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRB1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15316081), (PMID:16885194) Ensembl
MGI		 PMID:15316081 PMID:16885194 GO_REF:0000107 NCBI chr 1:197,201,504...197,478,455
Ensembl chr 1:197,268,204...197,478,455 		JBrowse link
G DSCAM DS cell adhesion molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18216855) Ensembl
MGI		 PMID:18216855 GO_REF:0000107 NCBI chr21:40,010,999...40,847,158
Ensembl chr21:40,010,999...40,847,158 		JBrowse link
G GRK1 G protein-coupled receptor kinase 1 acts_upstream_of_or_within ISO (PMID:10097103) MGI PMID:10097103 NCBI chr13:113,648,199...113,737,736
Ensembl chr13:113,667,219...113,737,736 		JBrowse link
regulation of lens fiber cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN1B cyclin dependent kinase inhibitor 1B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9784491) Ensembl
MGI		 PMID:9784491 GO_REF:0000107 NCBI chr12:12,717,368...12,722,369
Ensembl chr12:12,685,498...12,722,369 		JBrowse link
G CDKN1C cyclin dependent kinase inhibitor 1C acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9784491) MGI
Ensembl		 PMID:9784491 GO_REF:0000107 NCBI chr11:2,883,218...2,885,775
Ensembl chr11:2,883,213...2,885,775 		JBrowse link
regulation of neural retina development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL4 delta like canonical Notch ligand 4 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:40,929,340...40,939,073
Ensembl chr15:40,929,340...40,939,073 		JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:23,192,312...23,194,245
Ensembl chr10:23,192,312...23,194,245 		JBrowse link
G SIX3 SIX homeobox 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:44,941,702...44,946,071
Ensembl chr 2:44,941,702...44,946,071 		JBrowse link
regulation of retina development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELF4 CUGBP Elav-like family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23932931) Ensembl
MGI		 PMID:23932931 GO_REF:0000107 NCBI chr18:37,242,844...37,565,798
Ensembl chr18:37,243,040...37,565,827 		JBrowse link
retina development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACHE acetylcholinesterase (Yt blood group) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15579149) Ensembl
MGI		 PMID:15579149 GO_REF:0000107 NCBI chr 7:100,889,994...100,896,994
Ensembl chr 7:100,889,994...100,896,974 		JBrowse link
G ACTB actin beta ISO RGD PMID:22916200 RGD:9587758 NCBI chr 7:5,527,148...5,530,601
Ensembl chr 7:5,526,409...5,563,902 		JBrowse link
G AGTPBP1 ATP/GTP binding carboxypeptidase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544)
(PMID:24791901)		 Ensembl
MGI		 PMID:21052544 PMID:24791901 GO_REF:0000107 NCBI chr 9:85,546,539...85,805,483
Ensembl chr 9:85,546,539...85,742,029 		JBrowse link
G AHI1 Abelson helper integration site 1 acts_upstream_of_or_within ISO (PMID:20592197) MGI PMID:20592197 NCBI chr 6:135,283,532...135,497,740
Ensembl chr 6:135,283,407...135,498,434 		JBrowse link
G ALMS1 ALMS1 centrosome and basal body associated protein acts_upstream_of_or_within ISO (PMID:31302159) MGI PMID:31302159 NCBI chr 2:73,385,758...73,609,919
Ensembl chr 2:73,385,758...73,625,166 		JBrowse link
G APC APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (PMID:10982921) MGI PMID:10982921 NCBI chr 5:112,707,498...112,846,239
Ensembl chr 5:112,707,518...112,846,239 		JBrowse link
G ARSG arylsulfatase G acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:26975023) MGI
Ensembl		 PMID:26975023 GO_REF:0000107 NCBI chr17:68,259,170...68,452,019
Ensembl chr17:68,259,182...68,422,731 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9699561) Ensembl
MGI		 PMID:9699561 GO_REF:0000107 NCBI chr19:48,954,875...48,961,798
Ensembl chr19:48,954,815...48,961,798 		JBrowse link
G BBS1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31302159) MGI
Ensembl		 PMID:31302159 GO_REF:0000107 NCBI chr11:66,510,635...66,533,598
Ensembl chr11:66,510,606...66,533,613 		JBrowse link
G BBS10 Bardet-Biedl syndrome 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31302159), (PMID:36125046), (PMID:36700052) MGI
Ensembl		 PMID:31302159 PMID:36125046 PMID:36700052 GO_REF:0000107 NCBI chr12:76,344,474...76,348,415
Ensembl chr12:76,344,474...76,348,415 		JBrowse link
G BMP4 bone morphogenetic protein 4 ISO RGD PMID:17069773 RGD:2289001 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761 		JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12654290) Ensembl
MGI		 PMID:12654290 GO_REF:0000107 NCBI chr 4:94,757,955...95,158,450
Ensembl chr 4:94,757,955...95,158,448 		JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:10482474 GO_REF:0000107 RGD:5129487 NCBI chr 2:202,376,327...202,567,749
Ensembl chr 2:202,376,327...202,567,751 		JBrowse link
G C3 complement C3 acts_upstream_of_or_within ISO (PMID:28057640) MGI PMID:28057640 NCBI chr19:6,677,704...6,720,650
Ensembl chr19:6,677,704...6,730,562 		JBrowse link
G CACNA1F calcium voltage-gated channel subunit alpha1 F acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chr  X:49,205,063...49,233,340
Ensembl chr  X:49,205,063...49,233,371 		JBrowse link
G CALB1 calbindin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:90,058,608...90,082,879
Ensembl chr 8:90,058,608...90,095,475 		JBrowse link
G CEP290 centrosomal protein 290 acts_upstream_of_or_within ISO (PMID:21052544), (PMID:31302159) MGI PMID:21052544 PMID:31302159 NCBI chr12:88,049,016...88,142,088
Ensembl chr12:88,049,016...88,142,099 		JBrowse link
G CFD complement factor D acts_upstream_of_or_within ISO (PMID:28057640) MGI PMID:28057640 NCBI chr19:859,664...863,641
Ensembl chr19:859,453...867,884 		JBrowse link
G CFH complement factor H acts_upstream_of_or_within_positive_effect ISO (PMID:30705315)
(PMID:28057640)
(PMID:17921253), (PMID:28057640)		 MGI PMID:17921253 PMID:28057640 PMID:30705315 NCBI chr 1:196,652,043...196,747,504
Ensembl chr 1:196,651,754...196,752,476 		JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 involved_in IMP (PMID:15300250) BHF-UCL PMID:15300250 NCBI chr 8:60,678,740...60,868,028
Ensembl chr 8:60,678,740...60,868,028 		JBrowse link
G CLCN2 chloride voltage-gated channel 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 3:184,346,185...184,361,605
Ensembl chr 3:184,346,185...184,361,650 		JBrowse link
G CLN8 CLN8 transmembrane ER and ERGIC protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544)
(PMID:15565184)		 Ensembl
MGI		 PMID:15565184 PMID:21052544 GO_REF:0000107 NCBI chr 8:1,753,059...1,786,570
Ensembl chr 8:1,755,778...1,801,711 		JBrowse link
G CNGA3 cyclic nucleotide gated channel subunit alpha 3 acts_upstream_of_or_within ISO (PMID:21124780) MGI PMID:21124780 NCBI chr 2:98,346,456...98,398,601
Ensembl chr 2:98,346,188...98,398,601 		JBrowse link
G CRB1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22447858), (PMID:25147295) Ensembl
MGI		 PMID:22447858 PMID:25147295 GO_REF:0000107 NCBI chr 1:197,201,504...197,478,455
Ensembl chr 1:197,268,204...197,478,455 		JBrowse link
G CRX cone-rod homeobox acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chr19:47,821,937...47,843,324
Ensembl chr19:47,819,779...47,843,330 		JBrowse link
G DCLK1 doublecortin like kinase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr13:35,768,652...36,131,939
Ensembl chr13:35,768,652...36,131,382 		JBrowse link
G DCX doublecortin involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:111,293,779...111,412,192
Ensembl chr  X:111,293,779...111,412,429 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:170,282,206...170,291,078
Ensembl chr 6:170,282,206...170,306,565 		JBrowse link
G DRAM2 DNA damage regulated autophagy modulator 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:37691820) MGI
Ensembl		 PMID:37691820 GO_REF:0000107 NCBI chr 1:111,117,163...111,140,093
Ensembl chr 1:111,117,163...111,140,203 		JBrowse link
G DRD4 dopamine receptor D4 ISO RGD PMID:18778704 RGD:7175073 NCBI chr11:637,269...640,706
Ensembl chr11:637,269...640,706 		JBrowse link
G DTNBP1 dystrobrevin binding protein 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:23954924 GO_REF:0000107 RGD:11251759 NCBI chr 6:15,522,807...15,663,058
Ensembl chr 6:15,522,807...15,663,058 		JBrowse link
G ELP6 elongator acetyltransferase complex subunit 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27715390) MGI
Ensembl		 PMID:27715390 GO_REF:0000107 NCBI chr 3:47,495,640...47,513,712
Ensembl chr 3:47,495,640...47,513,712 		JBrowse link
G GDNF glial cell derived neurotrophic factor ISO RGD PMID:16650834 RGD:2324945 NCBI chr 5:37,812,677...37,840,041
Ensembl chr 5:37,812,677...37,840,041 		JBrowse link
G GNAT1 G protein subunit alpha transducin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544)
(PMID:21124780)		 Ensembl
MGI		 PMID:21052544 PMID:21124780 GO_REF:0000107 NCBI chr 3:50,191,610...50,197,696
Ensembl chr 3:50,191,610...50,197,696 		JBrowse link
G GNB1 G protein subunit beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 1:1,785,286...1,891,087
Ensembl chr 1:1,785,285...1,892,292 		JBrowse link
G GRM6 glutamate metabotropic receptor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 5:178,978,327...178,995,320
Ensembl chr 5:178,977,587...178,996,206 		JBrowse link
G GRN granulin precursor acts_upstream_of_or_within ISO (PMID:28728022) MGI PMID:28728022 NCBI chr17:44,345,302...44,353,106
Ensembl chr17:44,345,246...44,353,106 		JBrowse link
G HPCA hippocalcin involved_in ISO
IEA		 RGD
Ensembl		 PMID:7789406 GO_REF:0000107 RGD:9686441 NCBI chr 1:32,885,996...32,894,646
Ensembl chr 1:32,885,994...32,898,441 		JBrowse link
G HPS1 HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chr10:98,413,948...98,446,935
Ensembl chr10:98,410,939...98,446,963 		JBrowse link
G IL4 interleukin 4 ISO RGD PMID:23070471 RGD:7829830 NCBI chr 5:132,673,989...132,682,678
Ensembl chr 5:132,673,986...132,682,678 		JBrowse link
G IMPDH1 inosine monophosphate dehydrogenase 1 ISO RGD PMID:18295529 RGD:5144133 NCBI chr 7:128,392,277...128,409,982
Ensembl chr 7:128,392,277...128,409,986 		JBrowse link
G IMPDH2 inosine monophosphate dehydrogenase 2 ISO RGD PMID:18295529 RGD:5144133 NCBI chr 3:49,024,325...49,029,398
Ensembl chr 3:49,024,325...49,029,447 		JBrowse link
G JMJD6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15345036) Ensembl
MGI		 PMID:15345036 GO_REF:0000107 NCBI chr17:76,712,836...76,726,606
Ensembl chr17:76,712,832...76,726,799 		JBrowse link
G LAMA1 laminin subunit alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr18:6,941,742...7,117,797
Ensembl chr18:6,941,742...7,117,797 		JBrowse link
G LAMB2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19907020) Ensembl
MGI		 PMID:19907020 GO_REF:0000107 NCBI chr 3:49,121,114...49,133,050
Ensembl chr 3:49,121,114...49,133,118 		JBrowse link
G LAMC3 laminin subunit gamma 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19907020) Ensembl
MGI		 PMID:19907020 GO_REF:0000107 NCBI chr 9:131,009,174...131,094,473
Ensembl chr 9:131,009,174...131,094,473 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16111892) Ensembl
MGI		 PMID:16111892 GO_REF:0000107 NCBI chr22:33,066,663...33,922,824
Ensembl chr22:33,162,226...33,922,841 		JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:36,936,785...36,944,612
Ensembl chr17:36,936,785...36,944,612 		JBrowse link
G LHX2 LIM homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19146846) Ensembl
MGI		 PMID:19146846 GO_REF:0000107 NCBI chr 9:124,011,768...124,033,301
Ensembl chr 9:124,001,670...124,033,301 		JBrowse link
G LIF LIF interleukin 6 family cytokine ISO RGD PMID:16643897 RGD:2326157 NCBI chr22:30,240,453...30,246,759
Ensembl chr22:30,240,453...30,246,759 		JBrowse link
G LPCAT1 lysophosphatidylcholine acyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 5:1,461,427...1,523,960
Ensembl chr 5:1,456,480...1,524,282 		JBrowse link
G MAX MYC associated factor X involved_in ISO
IEA		 RGD
Ensembl		 PMID:14603520 GO_REF:0000107 RGD:2316820 NCBI chr14:65,006,101...65,102,695
Ensembl chr14:65,006,174...65,102,695 		JBrowse link
G MDM1 Mdm1 nuclear protein involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:21052544) GO_Central
MGI		 PMID:21052544 GO_REF:0000033 NCBI chr12:68,294,566...68,332,362
Ensembl chr12:68,272,443...68,332,381 		JBrowse link
G MERTK MER proto-oncogene, tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 2:111,898,607...112,029,561
Ensembl chr 2:111,898,607...112,029,561 		JBrowse link
G MFRP membrane frizzled-related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr11:119,338,942...119,346,705
Ensembl chr11:119,338,942...119,346,705 		JBrowse link
G MFSD8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27654426) MGI
Ensembl		 PMID:27654426 GO_REF:0000107 NCBI chr 4:127,917,732...127,965,963
Ensembl chr 4:127,917,799...127,966,034 		JBrowse link
G MIR182 microRNA 182 acts_upstream_of_or_within ISO (PMID:28819115)
(PMID:23341629)		 MGI PMID:23341629 PMID:28819115 NCBI chr 7:129,770,383...129,770,492
Ensembl chr 7:129,770,383...129,770,492 		JBrowse link
G MIR183 microRNA 183 acts_upstream_of_or_within ISO (PMID:28819115)
(PMID:23341629)		 MGI PMID:23341629 PMID:28819115 NCBI chr 7:129,774,905...129,775,014
Ensembl chr 7:129,774,905...129,775,014 		JBrowse link
G MIR96 microRNA 96 acts_upstream_of_or_within ISO (PMID:28819115)
(PMID:23341629)		 MGI PMID:23341629 PMID:28819115 NCBI chr 7:129,774,692...129,774,769
Ensembl chr 7:129,774,692...129,774,769 		JBrowse link
G MUSK muscle associated receptor tyrosine kinase ISO RGD PMID:16899069 RGD:2317091 NCBI chr 9:110,668,791...110,806,558
Ensembl chr 9:110,668,779...110,806,558 		JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:11283949), (PMID:9356462) MGI PMID:9356462 PMID:11283949 NCBI chr17:8,474,212...8,630,725
Ensembl chr17:8,474,207...8,631,376 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26607664) Ensembl
MGI		 PMID:26607664 GO_REF:0000107 NCBI chr17:42,536,241...42,544,449
Ensembl chr17:42,536,241...42,544,449 		JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9071226) Ensembl
MGI		 PMID:9071226 GO_REF:0000107 NCBI chr  X:43,948,776...43,973,390
Ensembl chr  X:43,948,776...43,973,395 		JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728677) Ensembl
MGI		 PMID:15728677 GO_REF:0000107 NCBI chr11:119,638,098...119,729,200
Ensembl chr11:119,623,408...119,729,200 		JBrowse link
G NEUROD4 neuronal differentiation 4 involved_in ISO
IEA		 RGD
Ensembl		 PMID:15345241 GO_REF:0000107 RGD:2311603 NCBI chr12:55,019,974...55,030,017
Ensembl chr12:55,019,974...55,030,017 		JBrowse link
G NFIA nuclear factor I A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31128945) Ensembl
MGI		 PMID:31128945 GO_REF:0000107 NCBI chr 1:61,077,227...61,462,788
Ensembl chr 1:60,865,259...61,462,788 		JBrowse link
G NFIB nuclear factor I B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31128945) Ensembl
MGI		 PMID:31128945 GO_REF:0000107 NCBI chr 9:14,081,843...14,532,077
Ensembl chr 9:14,081,843...14,398,983 		JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:31128945) MGI PMID:31128945 NCBI chr19:12,995,475...13,098,796
Ensembl chr19:12,995,475...13,098,796 		JBrowse link
G NOS3 nitric oxide synthase 3 ISO RGD PMID:16639026 RGD:7771562 NCBI chr 7:150,991,017...151,014,588
Ensembl chr 7:150,991,017...151,014,588 		JBrowse link
G NPHP1 nephrocystin 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:110,123,348...110,205,013
Ensembl chr 2:110,122,311...110,205,066 		JBrowse link
G NPHP4 nephrocystin 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 1:5,862,811...5,992,425
Ensembl chr 1:5,862,811...5,992,473 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11997145)
(PMID:16702404)		 Ensembl
MGI		 PMID:11997145 PMID:16702404 GO_REF:0000107 NCBI chr 6:108,166,022...108,188,809
Ensembl chr 6:108,166,022...108,188,805 		JBrowse link
G NR2E3 nuclear receptor subfamily 2 group E member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12407160)
(PMID:21052544)		 Ensembl
MGI		 PMID:12407160 PMID:21052544 GO_REF:0000107 NCBI chr15:71,810,554...71,818,253
Ensembl chr15:71,792,638...71,818,259 		JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 ISO RGD PMID:22714110 RGD:124713571 NCBI chr 2:156,324,437...156,332,721
Ensembl chr 2:156,324,437...156,342,348 		JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25542970) Ensembl
MGI		 PMID:25542970 GO_REF:0000107 NCBI chr 9:84,668,522...85,027,054
Ensembl chr 9:84,668,375...85,095,751 		JBrowse link
G OPA1 OPA1 mitochondrial dynamin like GTPase ISO RGD PMID:15505078 RGD:1547836 NCBI chr 3:193,593,208...193,697,811
Ensembl chr 3:193,593,144...193,697,811 		JBrowse link
G OPN4 opsin 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21124780) Ensembl
MGI		 PMID:21124780 GO_REF:0000107 NCBI chr10:86,654,547...86,666,460
Ensembl chr10:86,654,518...86,666,460 		JBrowse link
G PAX4 paired box 4 involved_in ISO
IBA
IEA		 RGD
GO_Central
Ensembl		 PMID:19012751 GO_REF:0000033 GO_REF:0000107 RGD:2311636 NCBI chr 7:127,610,292...127,618,142
Ensembl chr 7:127,610,292...127,618,142 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:19146846) RGD
GO_Central
MGI
Ensembl		 PMID:19012751 PMID:19146846 GO_REF:0000033 GO_REF:0000107 RGD:2311636 NCBI chr11:31,789,026...31,817,961
Ensembl chr11:31,784,779...31,817,961 		JBrowse link
G PDE6A phosphodiesterase 6A involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:21052544) GO_Central
MGI		 PMID:21052544 GO_REF:0000033 NCBI chr 5:149,857,953...149,944,793
Ensembl chr 5:149,857,953...149,944,793 		JBrowse link
G PDE6B phosphodiesterase 6B involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:21052544) Ensembl
MGI
GO_Central		 PMID:21052544 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:625,573...670,782
Ensembl chr 4:625,573...670,782 		JBrowse link
G PDGFB platelet derived growth factor subunit B acts_upstream_of_or_within ISO (PMID:25224828) MGI PMID:25224828 NCBI chr22:39,223,359...39,244,982
Ensembl chr22:39,223,359...39,244,982 		JBrowse link
G PFDN5 prefoldin subunit 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr12:53,295,542...53,299,450
Ensembl chr12:53,295,291...53,299,452 		JBrowse link
G POU4F2 POU class 4 homeobox 2 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:9630743)
(PMID:8637595)		 UniProt
MGI
Ensembl		 PMID:8637595 PMID:9630743 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:146,638,893...146,642,474
Ensembl chr 4:146,638,893...146,642,474 		JBrowse link
G PRPH2 peripherin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28053051)
(PMID:21052544)
(PMID:15964665)		 Ensembl
MGI		 PMID:15964665 PMID:21052544 PMID:28053051 GO_REF:0000107 NCBI chr 6:42,696,598...42,722,597
Ensembl chr 6:42,696,598...42,722,597 		JBrowse link
G PTN pleiotrophin ISO RGD PMID:8453763 PMID:16914133 RGD:9831439 RGD:9831456 NCBI chr 7:137,227,341...137,343,733
Ensembl chr 7:137,227,341...137,343,774 		JBrowse link
G RBP4 retinol binding protein 4 acts_upstream_of_or_within ISO (PMID:11562477) MGI PMID:11562477 NCBI chr10:93,591,694...93,601,744
Ensembl chr10:93,591,687...93,601,744 		JBrowse link
G RD3 RD3 regulator of GUCY2D involved_in
acts_upstream_of_or_within		 ISS
ISO
IBA
IEA		 (PMID:21052544) UniProt
MGI
GO_Central
Ensembl		 PMID:21052544 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:211,476,522...211,492,162
Ensembl chr 1:211,476,522...211,492,162 		JBrowse link
G RET ret proto-oncogene involved_in ISO
IEA		 RGD
Ensembl		 PMID:16650834 GO_REF:0000107 RGD:2324945 NCBI chr10:43,077,069...43,130,351
Ensembl chr10:43,077,064...43,130,351 		JBrowse link
G RHO rhodopsin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 3:129,528,639...129,535,344
Ensembl chr 3:129,528,639...129,535,344 		JBrowse link
G RNPEP arginyl aminopeptidase ISO RGD PMID:15500823 RGD:2325937 NCBI chr 1:201,982,648...202,006,143
Ensembl chr 1:201,982,372...202,006,147 		JBrowse link
G ROM1 retinal outer segment membrane protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28053051) Ensembl
MGI		 PMID:28053051 GO_REF:0000107 NCBI chr11:62,613,257...62,615,116
Ensembl chr11:62,611,722...62,615,116 		JBrowse link
G RORB RAR related orphan receptor B involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:74,497,335...74,693,177
Ensembl chr 9:74,497,335...74,693,177 		JBrowse link
G RP1 RP1 axonemal microtubule associated involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:21052544) Ensembl
MGI
GO_Central		 PMID:21052544 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:54,559,185...54,871,234
Ensembl chr 8:54,509,422...54,871,720 		JBrowse link
G RP1L1 RP1 like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:10,606,349...10,655,143
Ensembl chr 8:10,606,349...10,712,187 		JBrowse link
G RPGRIP1 RPGR interacting protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr14:21,280,083...21,351,301
Ensembl chr14:21,280,083...21,351,301 		JBrowse link
G RPL24 ribosomal protein L24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10049578), (PMID:9331275) Ensembl
MGI		 PMID:9331275 PMID:10049578 GO_REF:0000107 NCBI chr 3:101,681,091...101,686,718
Ensembl chr 3:101,681,091...101,686,733 		JBrowse link
G RRM1 ribonucleotide reductase catalytic subunit M1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:2647502 GO_REF:0000107 RGD:5133699 NCBI chr11:4,094,685...4,138,932
Ensembl chr11:4,094,707...4,138,932 		JBrowse link
G SCAPER S-phase cyclin A associated protein in the ER acts_upstream_of_or_within IMP (PMID:28794130) MGI PMID:28794130 NCBI chr15:76,347,904...76,905,340
Ensembl chr15:76,347,904...76,905,444 		JBrowse link
G SERPINF1 serpin family F member 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:21738387 GO_REF:0000107 RGD:8655555 NCBI chr17:1,762,060...1,777,565
Ensembl chr17:1,762,029...1,777,565 		JBrowse link
G SKI SKI proto-oncogene involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:17003410) BHF-UCL
MGI		 PMID:17003410 GO_REF:0000024 NCBI chr 1:2,228,319...2,310,213
Ensembl chr 1:2,227,388...2,310,213 		JBrowse link
G SLC1A1 solute carrier family 1 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,490,468...4,587,469
Ensembl chr 9:4,490,468...4,587,469 		JBrowse link
G SLC38A8 solute carrier family 38 member 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:37862028) MGI
Ensembl		 PMID:37862028 GO_REF:0000107 NCBI chr16:84,009,667...84,043,372
Ensembl chr16:84,009,667...84,042,795 		JBrowse link
G SLC4A5 solute carrier family 4 member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21705333) Ensembl
MGI		 PMID:21705333 GO_REF:0000107 NCBI chr 2:74,216,242...74,343,416
Ensembl chr 2:74,216,242...74,343,416 		JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:19490914) UniProt
MGI
Ensembl		 PMID:19490914 GO_REF:0000024 GO_REF:0000107 NCBI chr16:981,770...986,979
Ensembl chr16:981,444...986,979 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:19490914) Ensembl
MGI
UniProt		 PMID:19490914 GO_REF:0000024 GO_REF:0000107 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416 		JBrowse link
G TBC1D32 TBC1 domain family member 32 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20159594) Ensembl
MGI		 PMID:20159594 GO_REF:0000107 NCBI chr 6:121,079,494...121,334,729
Ensembl chr 6:121,079,494...121,334,745 		JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20711468) Ensembl
MGI		 PMID:20711468 GO_REF:0000107 NCBI chr11:68,039,025...68,053,762
Ensembl chr11:68,039,025...68,050,895 		JBrowse link
G TENT2 terminal nucleotidyltransferase 2 ISO RGD PMID:23700402 RGD:11041783 NCBI chr 5:79,612,441...79,688,246
Ensembl chr 5:79,612,120...79,688,246 		JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (PMID:18973577) MGI PMID:18973577 NCBI chr18:3,412,009...3,459,978
Ensembl chr18:3,411,608...3,459,978 		JBrowse link
G TGIF2 TGFB induced factor homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18926818) Ensembl
MGI		 PMID:18926818 GO_REF:0000107 NCBI chr20:36,573,464...36,593,950
Ensembl chr20:36,573,488...36,593,950 		JBrowse link
G TTLL5 tubulin tyrosine ligase like 5 acts_upstream_of_or_within IMP (PMID:24791901) MGI PMID:24791901 NCBI chr14:75,661,246...75,955,079
Ensembl chr14:75,633,625...75,955,079 		JBrowse link
G TUB TUB bipartite transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr11:8,019,059...8,106,243
Ensembl chr11:8,019,244...8,106,243 		JBrowse link
G TULP1 TUB like protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 6:35,497,874...35,512,896
Ensembl chr 6:35,497,874...35,512,896 		JBrowse link
G UCHL3 ubiquitin C-terminal hydrolase L3 acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chr13:75,549,502...75,606,020
Ensembl chr13:75,549,483...75,606,020 		JBrowse link
G USH2A usherin ISO RGD PMID:12160733 RGD:634438 NCBI chr 1:215,622,891...216,423,448
Ensembl chr 1:215,622,891...216,423,448 		JBrowse link
G VAX2 ventral anterior homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10595508) Ensembl
MGI		 PMID:10595508 GO_REF:0000107 NCBI chr 2:70,900,576...70,933,446
Ensembl chr 2:70,900,576...70,965,373 		JBrowse link
G XRN2 5'-3' exoribonuclease 2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:23700402 GO_REF:0000107 RGD:11041783 NCBI chr20:21,303,331...21,389,825
Ensembl chr20:21,303,331...21,389,825 		JBrowse link
G ZNF513 zinc finger protein 513 involved_in IMP (PMID:20797688) UniProt PMID:20797688 NCBI chr 2:27,377,235...27,380,734
Ensembl chr 2:27,377,235...27,380,790 		JBrowse link
retina layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:135,283,532...135,497,740
Ensembl chr 6:135,283,407...135,498,434 		JBrowse link
G ARL6 ARF like GTPase 6 acts_upstream_of_or_within ISO (PMID:22139371)
(PMID:20333246)		 MGI PMID:20333246 PMID:22139371 NCBI chr 3:97,764,521...97,801,242
Ensembl chr 3:97,764,521...97,801,229 		JBrowse link
G ATP8A2 ATPase phospholipid transporting 8A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:25,371,974...26,025,851
Ensembl chr13:25,371,974...26,025,851 		JBrowse link
G CALB1 calbindin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:90,058,608...90,082,879
Ensembl chr 8:90,058,608...90,095,475 		JBrowse link
G CRB1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17234588) Ensembl
MGI		 PMID:17234588 GO_REF:0000107 NCBI chr 1:197,201,504...197,478,455
Ensembl chr 1:197,268,204...197,478,455 		JBrowse link
G DSCAM DS cell adhesion molecule involved_in ISS UniProt GO_REF:0000024 NCBI chr21:40,010,999...40,847,158
Ensembl chr21:40,010,999...40,847,158 		JBrowse link
G FAT3 FAT atypical cadherin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21903076) Ensembl
MGI		 PMID:21903076 GO_REF:0000107 NCBI chr11:92,224,818...92,896,473
Ensembl chr11:92,224,818...92,896,473 		JBrowse link
G FJX1 four-jointed box kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21903076) Ensembl
MGI		 PMID:21903076 GO_REF:0000107 NCBI chr11:35,618,460...35,620,865
Ensembl chr11:35,618,460...35,620,865 		JBrowse link
G FOXN4 forkhead box N4 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:109,277,978...109,309,284
Ensembl chr12:109,277,978...109,309,284 		JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,929,324...113,977,869
Ensembl chr 1:113,929,324...113,977,869 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:139,561,570...139,777,998
Ensembl chr 7:139,561,570...139,777,998 		JBrowse link
G IRX6 iroquois homeobox 6 acts_upstream_of_or_within ISO (PMID:23172916) MGI PMID:23172916 NCBI chr16:55,324,203...55,330,756
Ensembl chr16:55,324,203...55,330,756 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16111892) Ensembl
MGI		 PMID:16111892 GO_REF:0000107 NCBI chr22:33,066,663...33,922,824
Ensembl chr22:33,162,226...33,922,841 		JBrowse link
G LHX1 LIM homeobox 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:36,936,785...36,944,612
Ensembl chr17:36,936,785...36,944,612 		JBrowse link
G MEGF11 multiple EGF like domains 11 involved_in ISS UniProt GO_REF:0000024 NCBI chr15:65,895,299...66,253,750
Ensembl chr15:65,895,079...66,253,756 		JBrowse link
G MIR145 microRNA 145 ISO RGD PMID:34291866 RGD:155260301 NCBI chr 5:149,430,646...149,430,733
Ensembl chr 5:149,430,646...149,430,733 		JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29654250) Ensembl
MGI		 PMID:29654250 GO_REF:0000107 NCBI chr  X:43,948,776...43,973,390
Ensembl chr  X:43,948,776...43,973,395 		JBrowse link
G PROM1 prominin 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 4:15,968,228...16,084,023
Ensembl chr 4:15,963,076...16,084,378 		JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:23,192,312...23,194,245
Ensembl chr10:23,192,312...23,194,245 		JBrowse link
G PTPRM protein tyrosine phosphatase receptor type M involved_in IMP (PMID:14623235) UniProt PMID:14623235 NCBI chr18:7,567,316...8,406,856
Ensembl chr18:7,566,782...8,406,861 		JBrowse link
G RDH13 retinol dehydrogenase 13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22605914) Ensembl
MGI		 PMID:22605914 GO_REF:0000107 NCBI chr19:55,039,103...55,069,520
Ensembl chr19:55,039,108...55,071,291 		JBrowse link
G RS1 retinoschisin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11983912)
(PMID:15326152)		 Ensembl
MGI		 PMID:11983912 PMID:15326152 GO_REF:0000107 NCBI chr  X:18,639,688...18,672,108
Ensembl chr  X:18,639,688...18,672,108 		JBrowse link
G SDK1 sidekick cell adhesion molecule 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:3,301,252...4,269,000
Ensembl chr 7:3,301,252...4,269,000 		JBrowse link
G SDK2 sidekick cell adhesion molecule 2 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:73,334,384...73,644,445
Ensembl chr17:73,334,384...73,644,445 		JBrowse link
G SLC1A1 solute carrier family 1 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19766171) Ensembl
MGI		 PMID:19766171 GO_REF:0000107 NCBI chr 9:4,490,468...4,587,469
Ensembl chr 9:4,490,468...4,587,469 		JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in IEP (PMID:20607706) UniProt PMID:20607706 NCBI chr 6:10,396,677...10,419,659
Ensembl chr 6:10,393,186...10,419,659 		JBrowse link
G TFAP2B transcription factor AP-2 beta involved_in IEP (PMID:20607706) UniProt PMID:20607706 NCBI chr 6:50,818,355...50,847,619
Ensembl chr 6:50,818,723...50,847,619 		JBrowse link
G TSPAN12 tetraspanin 12 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:120,787,320...120,858,335
Ensembl chr 7:120,787,320...120,858,402 		JBrowse link
retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:17092954) MGI PMID:17092954 NCBI chr 8:64,580,365...64,583,627
Ensembl chr 8:64,580,365...64,583,627 		JBrowse link
G CRB1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17234588), (PMID:25147295) Ensembl
MGI		 PMID:17234588 PMID:25147295 GO_REF:0000107 NCBI chr 1:197,201,504...197,478,455
Ensembl chr 1:197,268,204...197,478,455 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:170,282,206...170,291,078
Ensembl chr 6:170,282,206...170,306,565 		JBrowse link
G IMPG2 interphotoreceptor matrix proteoglycan 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32265257) Ensembl
MGI		 PMID:32265257 GO_REF:0000107 NCBI chr 3:101,222,546...101,320,575
Ensembl chr 3:101,222,546...101,320,575 		JBrowse link
G LRP5 LDL receptor related protein 5 involved_in IMP (PMID:15346351) BHF-UCL PMID:15346351 NCBI chr11:68,298,412...68,449,275
Ensembl chr11:68,312,591...68,449,275 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:18985738) MGI PMID:18985738 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044 		JBrowse link
G MAN2A1 mannosidase alpha class 2A member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20144606) Ensembl
MGI		 PMID:20144606 GO_REF:0000107 NCBI chr 5:109,689,927...109,869,625
Ensembl chr 5:109,689,927...109,869,625 		JBrowse link
G MFSD2A MFSD2 lysolipid transporter A, lysophospholipid involved_in
acts_upstream_of_or_within		 IEA
ISS		 Ensembl
ARUK-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:39,955,145...39,969,956
Ensembl chr 1:39,955,112...39,969,968 		JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15716406) Ensembl
MGI		 PMID:15716406 GO_REF:0000107 NCBI chr  X:43,948,776...43,973,390
Ensembl chr  X:43,948,776...43,973,395 		JBrowse link
G NECTIN3 nectin cell adhesion molecule 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728677) Ensembl
MGI		 PMID:15728677 GO_REF:0000107 NCBI chr 3:111,071,816...111,194,170
Ensembl chr 3:111,070,071...111,275,563 		JBrowse link
G PROM1 prominin 1 involved_in IMP (PMID:18654668) BHF-UCL PMID:18654668 NCBI chr 4:15,968,228...16,084,023
Ensembl chr 4:15,963,076...16,084,378 		JBrowse link
G PROX1 prospero homeobox 1 involved_in ISS (PMID:11789987) BHF-UCL PMID:11789987 NCBI chr 1:213,983,151...214,041,510
Ensembl chr 1:213,983,181...214,041,510 		JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17301087) Ensembl
MGI		 PMID:17301087 GO_REF:0000107 NCBI chr10:23,192,312...23,194,245
Ensembl chr10:23,192,312...23,194,245 		JBrowse link
G ROM1 retinal outer segment membrane protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20300562) Ensembl
MGI		 PMID:20300562 GO_REF:0000107 NCBI chr11:62,613,257...62,615,116
Ensembl chr11:62,611,722...62,615,116 		JBrowse link
G RP1 RP1 axonemal microtubule associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 8:54,559,185...54,871,234
Ensembl chr 8:54,509,422...54,871,720 		JBrowse link
G RPGR retinitis pigmentosa GTPase regulator acts_upstream_of_or_within ISO (PMID:10725384) MGI PMID:10725384 NCBI chr  X:38,269,163...38,327,509
Ensembl chr  X:38,269,163...38,327,544 		JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:16651659) MGI PMID:16651659 NCBI chr 3:181,711,925...181,714,436
Ensembl chr 3:181,711,925...181,714,436 		JBrowse link
G VSX2 visual system homeobox 2 acts_upstream_of_or_within ISO (PMID:16854970), (PMID:8630490) MGI PMID:8630490 PMID:16854970 NCBI chr14:74,239,449...74,262,738
Ensembl chr14:74,239,449...74,262,738 		JBrowse link
retina vasculature development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR2B activin A receptor type 2B involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:38,453,890...38,493,142
Ensembl chr 3:38,453,890...38,493,142 		JBrowse link
G ACVRL1 activin A receptor like type 1 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:51,906,944...51,923,361
Ensembl chr12:51,906,908...51,923,361 		JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:202,376,327...202,567,749
Ensembl chr 2:202,376,327...202,567,751 		JBrowse link
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19005183) Ensembl
MGI		 PMID:19005183 GO_REF:0000107 NCBI chr 2:38,067,509...38,076,151
Ensembl chr 2:38,066,973...38,109,902 		JBrowse link
G FZD4 frizzled class receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23217714)
(PMID:25083995), (PMID:25414188)		 Ensembl
MGI		 PMID:23217714 PMID:25083995 PMID:25414188 GO_REF:0000107 NCBI chr11:86,945,679...86,955,395
Ensembl chr11:86,945,679...86,955,395 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21212189) Ensembl
MGI		 PMID:21212189 GO_REF:0000107 NCBI chr14:61,695,513...61,748,258
Ensembl chr14:61,695,513...61,748,259 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16111892) Ensembl
MGI		 PMID:16111892 GO_REF:0000107 NCBI chr22:33,066,663...33,922,824
Ensembl chr22:33,162,226...33,922,841 		JBrowse link
G LRP5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22272305)
(PMID:25083995)		 Ensembl
MGI		 PMID:22272305 PMID:25083995 GO_REF:0000107 NCBI chr11:68,298,412...68,449,275
Ensembl chr11:68,312,591...68,449,275 		JBrowse link
G MIR218-1 microRNA 218-1 acts_upstream_of_or_within ISO (PMID:20947829) MGI PMID:20947829 NCBI chr 4:20,528,275...20,528,384
Ensembl chr 4:20,528,275...20,528,384 		JBrowse link
G MIR218-2 microRNA 218-2 acts_upstream_of_or_within ISO (PMID:20947829) MGI PMID:20947829 NCBI chr 5:168,768,146...168,768,255
Ensembl chr 5:168,768,146...168,768,255 		JBrowse link
G MIR23A microRNA 23a acts_upstream_of_or_within ISO (PMID:21536891) MGI PMID:21536891 NCBI chr19:13,836,587...13,836,659
Ensembl chr19:13,836,587...13,836,659 		JBrowse link
G MIR23B microRNA 23b acts_upstream_of_or_within ISO (PMID:21536891) MGI PMID:21536891 NCBI chr 9:95,085,208...95,085,304
Ensembl chr 9:95,085,208...95,085,304 		JBrowse link
G MIR24-1 microRNA 24-1 acts_upstream_of_or_within ISO (PMID:21536891) MGI PMID:21536891 NCBI chr 9:95,086,021...95,086,088
Ensembl chr 9:95,086,021...95,086,088 		JBrowse link
G MIR24-2 microRNA 24-2 acts_upstream_of_or_within ISO (PMID:21536891) MGI PMID:21536891 NCBI chr19:13,836,287...13,836,359
Ensembl chr19:13,836,287...13,836,359 		JBrowse link
G MIR27A microRNA 27a acts_upstream_of_or_within ISO (PMID:21536891) MGI PMID:21536891 NCBI chr19:13,836,440...13,836,517
Ensembl chr19:13,836,440...13,836,517 		JBrowse link
G MIR27B microRNA 27b acts_upstream_of_or_within ISO (PMID:21536891) MGI PMID:21536891 NCBI chr 9:95,085,445...95,085,541
Ensembl chr 9:95,085,445...95,085,541 		JBrowse link
G NDP norrin cystine knot growth factor NDP involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15716406), (PMID:18978344), (PMID:28575130), (PMID:29654250)
(PMID:23217714)
(PMID:15716406), (PMID:29715368)
(PMID:25083995), (PMID:25414188)		 Ensembl
MGI		 PMID:15716406 PMID:18978344 PMID:23217714 PMID:25083995 PMID:25414188 More... GO_REF:0000107 NCBI chr  X:43,948,776...43,973,390
Ensembl chr  X:43,948,776...43,973,395 		JBrowse link
G NRP1 neuropilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25414188) Ensembl
MGI		 PMID:25414188 GO_REF:0000107 NCBI chr10:33,177,493...33,334,667
Ensembl chr10:33,177,492...33,336,262 		JBrowse link
G PDGFB platelet derived growth factor subunit B acts_upstream_of_or_within ISO (PMID:25224828) MGI PMID:25224828 NCBI chr22:39,223,359...39,244,982
Ensembl chr22:39,223,359...39,244,982 		JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:54,229,293...54,298,245
Ensembl chr 4:54,229,280...54,298,245 		JBrowse link
G PDGFRB platelet derived growth factor receptor beta involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:150,113,839...150,155,845
Ensembl chr 5:150,113,839...150,155,872 		JBrowse link
G ROM1 retinal outer segment membrane protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20300562) Ensembl
MGI		 PMID:20300562 GO_REF:0000107 NCBI chr11:62,613,257...62,615,116
Ensembl chr11:62,611,722...62,615,116 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29715368) Ensembl
MGI		 PMID:29715368 GO_REF:0000107 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922 		JBrowse link
G VSTM4 V-set and transmembrane domain containing 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31698979) Ensembl
MGI		 PMID:31698979 GO_REF:0000107 NCBI chr10:49,014,236...49,115,522
Ensembl chr10:49,014,236...49,115,522 		JBrowse link
retina vasculature morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARHGEF15 Rho guanine nucleotide exchange factor 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22535667) Ensembl
MGI		 PMID:22535667 GO_REF:0000107 NCBI chr17:8,310,241...8,322,511
Ensembl chr17:8,310,241...8,322,514 		JBrowse link
G CLIC4 chloride intracellular channel 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19197003) Ensembl
MGI		 PMID:19197003 GO_REF:0000107 NCBI chr 1:24,745,447...24,844,321
Ensembl chr 1:24,745,382...24,844,321 		JBrowse link
G FZD4 frizzled class receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
IMP		 (PMID:19837032)
(PMID:12172548), (PMID:15024691)		 Ensembl
MGI
GO_Central
BHF-UCL		 PMID:12172548