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ONTOLOGY REPORT - ANNOTATIONS

Term:camera-type eye development
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Accession:GO:0043010 term browser browse the term
Definition:The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field.
Synonyms:alt_id: GO:0001747;   GO:0031075
 never_in_taxon: NCBITaxon:6656 ! Arthropoda


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camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI2 abl interactor 2 acts_upstream_of_or_within ISO (PMID:15572692) MGI PMID:15572692 NCBI chr37:12,162,815...12,278,505
Ensembl chr37:12,162,392...12,282,395 		JBrowse link
G AHR aryl hydrocarbon receptor involved_in ISO (PMID:10973493) DFLAT PMID:10973493 NCBI chr14:31,743,704...31,793,484
Ensembl chr14:31,686,170...31,791,444 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16368932)
(PMID:15366004)		 Ensembl
MGI		 PMID:15366004 PMID:16368932 GO_REF:0000107 NCBI chr30:23,074,432...23,170,374
Ensembl chr30:23,074,432...23,340,030 		JBrowse link
G ARHGAP35 Rho GTPase activating protein 35 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11044403) Ensembl
MGI		 PMID:11044403 GO_REF:0000107 NCBI chr 1:108,952,836...109,034,329
Ensembl chr 1:108,952,562...109,034,337 		JBrowse link
G B3GLCT beta 3-glucosyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31600785) MGI
Ensembl		 PMID:31600785 GO_REF:0000107 NCBI chr25:8,815,681...8,938,899
Ensembl chr25:8,817,628...8,939,249 		JBrowse link
G B9D1 B9 domain containing 1 acts_upstream_of_or_within ISO (PMID:22179047) MGI PMID:22179047 NCBI chr 5:40,854,110...40,866,828
Ensembl chr 5:40,854,127...40,866,824 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9268572)
(PMID:14681194)		 Ensembl
MGI		 PMID:9268572 PMID:14681194 GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15673568) Ensembl
MGI		 PMID:15673568 GO_REF:0000107 NCBI chr32:17,761,555...17,978,056
Ensembl chr32:17,870,904...18,016,444 		JBrowse link
G CACNA1C calcium voltage-gated channel subunit alpha1 C involved_in ISO (PMID:15454078) BHF-UCL PMID:15454078 NCBI chr27:44,007,363...44,748,251
Ensembl chr27:44,008,020...44,746,429 		JBrowse link
G CC2D2A coiled-coil and C2 domain containing 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24947469) Ensembl
MGI		 PMID:24947469 GO_REF:0000107 NCBI chr 3:64,731,165...64,867,743
Ensembl chr 3:64,731,171...64,867,547 		JBrowse link
G CDKN1C cyclin dependent kinase inhibitor 1C acts_upstream_of_or_within ISO (PMID:19276117) MGI PMID:19276117 NCBI chr18:46,860,636...46,861,697 JBrowse link
G CEP290 centrosomal protein 290 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:29,194,449...29,281,351
Ensembl chr15:29,194,983...29,280,429 		JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16207732) Ensembl
MGI		 PMID:16207732 GO_REF:0000107 NCBI chr29:11,115,865...11,284,713
Ensembl chr29:11,156,340...11,283,627 		JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within ISO (PMID:12546709) MGI PMID:12546709 NCBI chr31:37,307,070...37,310,262
Ensembl chr31:37,307,093...37,310,247 		JBrowse link
G CRYAB crystallin alpha B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12546709) Ensembl
MGI		 PMID:12546709 GO_REF:0000107 NCBI chr 5:21,181,836...21,185,164
Ensembl chr 5:21,179,936...21,360,132 		JBrowse link
G CRYBA1 crystallin beta A1 acts_upstream_of_or_within ISO (PMID:10585769) MGI PMID:10585769 NCBI chr 9:43,372,507...43,378,561
Ensembl chr 9:43,372,505...43,378,590 		JBrowse link
G CRYBA4 crystallin beta A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:20,272,962...20,280,368
Ensembl chr26:20,273,739...20,280,367 		JBrowse link
G CRYBB2 crystallin beta B2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:11381063) RGD
Ensembl
MGI		 PMID:8706714 PMID:11381063 GO_REF:0000107 RGD:1298813 NCBI chr26:19,298,947...19,308,447
Ensembl chr26:19,298,863...19,308,400 		JBrowse link
G CRYGC crystallin gamma C acts_upstream_of_or_within ISO (PMID:11773036) MGI PMID:11773036 Ensembl chr37:16,424,884...16,482,227 JBrowse link
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 ISO RGD PMID:15967433 RGD:2306661 NCBI chr30:37,793,277...37,799,535
Ensembl chr30:37,793,508...37,796,866 		JBrowse link
G DIP2A disco interacting protein 2 homolog A acts_upstream_of_or_within ISO (PMID:25220058) MGI PMID:25220058 NCBI chr31:39,695,620...39,778,527
Ensembl chr31:39,686,465...39,777,484 		JBrowse link
G EFEMP1 EGF containing fibulin extracellular matrix protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:56,632,801...56,694,872
Ensembl chr10:56,579,899...56,787,187 		JBrowse link
G FAT1 FAT atypical cadherin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:44,113,621...44,241,187
Ensembl chr16:44,128,386...44,241,192 		JBrowse link
G FBN1 fibrillin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:14,640,973...14,864,151
Ensembl chr30:14,640,973...14,864,151 		JBrowse link
G FBN2 fibrillin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:17,311,238...17,551,536
Ensembl chr11:17,311,226...17,551,536 		JBrowse link
G FKBP8 FKBP prolyl isomerase 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15105374) Ensembl
MGI		 PMID:15105374 GO_REF:0000107 NCBI chr20:44,494,856...44,504,084
Ensembl chr20:44,489,219...44,598,497 		JBrowse link
G FKRP fukutin related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23591631)
(PMID:19155270)		 Ensembl
MGI		 PMID:19155270 PMID:23591631 GO_REF:0000107 NCBI chr 1:109,166,527...109,177,393
Ensembl chr 1:109,168,644...109,178,319 		JBrowse link
G FOXC1 forkhead box C1 acts_upstream_of_or_within ISO (PMID:10395790)
(PMID:10767326)		 MGI PMID:10395790 PMID:10767326
G FOXC2 forkhead box C2 acts_upstream_of_or_within ISO (PMID:10767326) MGI PMID:10767326 NCBI chr 5:66,234,336...66,296,007
Ensembl chr 5:66,294,176...66,295,693 		JBrowse link
G FOXC2 forkhead box C2 involved_in IEA Ensembl GO_REF:0000107
G FOXE3 forkhead box E3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11309658) Ensembl
MGI		 PMID:11309658 GO_REF:0000107 NCBI chr15:13,291,160...13,295,982 JBrowse link
G FOXP2 forkhead box P2 acts_upstream_of_or_within ISO (PMID:17619227) MGI PMID:17619227 NCBI chr14:53,311,214...53,864,056
Ensembl chr14:53,312,045...53,862,655 		JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:17525797) MGI PMID:17525797 NCBI chr 1:72,927,346...72,930,119
Ensembl chr 1:72,927,670...72,928,827 		JBrowse link
G GJA8 gap junction protein alpha 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15253273)
(PMID:11782410)		 Ensembl
MGI		 PMID:11782410 PMID:15253273 GO_REF:0000107 NCBI chr17:58,360,313...58,428,751
Ensembl chr17:58,424,072...58,425,391 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18582859) Ensembl
MGI		 PMID:18582859 GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G GNAT2 G protein subunit alpha transducin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32049342) Ensembl
MGI		 PMID:32049342 GO_REF:0000107 NCBI chr 6:42,259,404...42,271,197
Ensembl chr 6:42,259,702...42,268,082 		JBrowse link
G GPD2 glycerol-3-phosphate dehydrogenase 2 acts_upstream_of_or_within ISO (PMID:21296886) MGI PMID:21296886 NCBI chr36:2,678,749...2,780,173
Ensembl chr36:2,681,188...2,777,535 		JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21377456) Ensembl
MGI		 PMID:21377456 GO_REF:0000107 NCBI chr13:3,204,898...3,362,533
Ensembl chr13:3,204,925...3,362,096 		JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:57,387,961...57,389,412
Ensembl chr 5:57,388,674...57,389,388 		JBrowse link
G HESX1 HESX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19093031) Ensembl
MGI		 PMID:19093031 GO_REF:0000107 NCBI chr20:33,193,813...33,197,226
Ensembl chr20:33,195,123...33,196,601 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:16488668 RGD:10002779 NCBI chr 1:75,499,334...75,511,525
Ensembl chr 1:75,499,393...75,511,425 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18582859) Ensembl
MGI		 PMID:18582859 GO_REF:0000107 NCBI chr37:25,616,942...25,622,989 JBrowse link
G JAG1 jagged canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10196361) Ensembl
MGI		 PMID:10196361 GO_REF:0000107 NCBI chr24:11,656,926...11,693,146
Ensembl chr24:11,657,416...11,692,199 		JBrowse link
G LAMA1 laminin subunit alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:73,309,383...73,438,543
Ensembl chr 7:73,309,388...73,448,151 		JBrowse link
G LIM2 lens intrinsic membrane protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9238094) Ensembl
MGI		 PMID:9238094 GO_REF:0000107 NCBI chr 1:105,593,457...105,599,788
Ensembl chr 1:105,593,224...105,599,650 		JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (PMID:20568247)
(PMID:10660670)		 MGI PMID:10660670 PMID:20568247 NCBI chr 9:56,542,844...56,625,609
Ensembl chr 9:56,542,826...56,625,530 		JBrowse link
G MAB21L1 mab-21 like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12642482) Ensembl
MGI		 PMID:12642482 GO_REF:0000107 NCBI chr25:5,055,149...5,058,126
Ensembl chr25:5,055,773...5,056,852 		JBrowse link
G MAB21L2 mab-21 like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15385160) Ensembl
MGI		 PMID:15385160 GO_REF:0000107 NCBI chr15:48,538,912...48,541,651
Ensembl chr15:48,539,955...48,541,034 		JBrowse link
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 acts_upstream_of_or_within ISO (PMID:12941696) MGI PMID:12941696 NCBI chr 2:43,918,210...43,996,817
Ensembl chr 2:43,917,604...43,995,209 		JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14500757) Ensembl
MGI		 PMID:14500757 GO_REF:0000107 NCBI chr 9:22,989,257...23,019,350
Ensembl chr 9:22,989,301...23,019,349 		JBrowse link
G MITF melanocyte inducing transcription factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15576400) MGI
Ensembl		 PMID:15576400 GO_REF:0000107 NCBI chr20:21,772,147...21,873,545
Ensembl chr20:21,612,927...21,870,578 		JBrowse link
G MTERF4 mitochondrial transcription termination factor 4 acts_upstream_of_or_within ISO (PMID:21531335) MGI PMID:21531335 NCBI chr25:51,129,186...51,144,452 JBrowse link
G MTNR1A melatonin receptor 1A ISO RGD PMID:12890503 RGD:9588674 NCBI chr16:44,258,239...44,286,761 JBrowse link
G MTNR1B melatonin receptor 1B ISO RGD PMID:12890503 RGD:9588674 NCBI chr21:7,639,532...7,643,534
Ensembl chr21:7,640,317...7,641,498 		JBrowse link
G MYF5 myogenic factor 5 acts_upstream_of_or_within ISO (PMID:19531352) MGI PMID:19531352 NCBI chr15:23,049,235...23,051,604
Ensembl chr15:23,048,585...23,051,970 		JBrowse link
G NEUROD1 neuronal differentiation 1 acts_upstream_of_or_within ISO (PMID:11861467) MGI PMID:11861467 NCBI chr36:24,853,591...24,857,886 JBrowse link
G NEUROD4 neuronal differentiation 4 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:11861467) Ensembl
GO_Central
MGI		 PMID:11861467 GO_REF:0000033 GO_REF:0000107 NCBI chr27:384,809...396,731
Ensembl chr27:389,095...390,090 		JBrowse link
G NFIX nuclear factor I X involved_in ISO (PMID:18477394) MGI PMID:18477394 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16000615)
(PMID:15371513)		 Ensembl
MGI		 PMID:15371513 PMID:16000615 GO_REF:0000107 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998 		JBrowse link
G PAX2 paired box 2 acts_upstream_of_or_within ISO (PMID:12756174) MGI PMID:12756174 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11062307)
(PMID:12183364)
(PMID:12756174)
(PMID:12648492), (PMID:16080917)
(PMID:12072567)
(PMID:11069887)		 Ensembl
MGI		 PMID:11062307 PMID:11069887 PMID:12072567 PMID:12183364 PMID:12648492 More... GO_REF:0000107
G PITX2 paired like homeodomain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:30,710,161...30,730,162
Ensembl chr32:30,710,685...30,730,273 		JBrowse link
G PKNOX1 PBX/knotted 1 homeobox 1 acts_upstream_of_or_within ISO (PMID:16847320) MGI PMID:16847320 NCBI chr31:37,189,753...37,223,844
Ensembl chr31:37,192,992...37,220,926 		JBrowse link
G PRSS56 serine protease 56 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21532570) Ensembl
MGI		 PMID:21532570 GO_REF:0000107 NCBI chr25:44,157,247...44,165,625
Ensembl chr25:44,160,615...44,165,625 		JBrowse link
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:37,861,844...38,006,433
Ensembl chr19:37,861,804...37,963,501 		JBrowse link
G RAX retina and anterior neural fold homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11105055), (PMID:15789424)
(PMID:13970081), (PMID:17247120), (PMID:640224)		 Ensembl
MGI		 PMID:640224 PMID:11105055 PMID:13970081 PMID:15789424 PMID:17247120 GO_REF:0000107 NCBI chr 1:16,940,671...16,945,127
Ensembl chr 1:16,940,658...16,943,633 		JBrowse link
G RCN1 reticulocalbin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19474196) Ensembl
MGI		 PMID:19474196 GO_REF:0000107 NCBI chr18:35,373,175...35,393,389
Ensembl chr18:35,374,116...35,395,528 		JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 ISO RGD PMID:9512345 RGD:633787 NCBI chr 6:76,887,399...76,911,133
Ensembl chr 6:76,887,399...76,911,131 		JBrowse link
G RPGRIP1L RPGRIP1 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17553904), (PMID:17558409) Ensembl
MGI		 PMID:17553904 PMID:17558409 GO_REF:0000107 NCBI chr 2:62,080,159...62,179,694
Ensembl chr 2:62,080,080...62,178,284 		JBrowse link
G RXRA retinoid X receptor alpha acts_upstream_of_or_within ISO (PMID:9376317) MGI PMID:9376317 NCBI chr 9:50,525,195...50,575,720
Ensembl chr 9:50,484,567...50,573,119 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12195432)
(PMID:18582859)
(PMID:16236765)
(PMID:12756179)		 Ensembl
MGI		 PMID:12195432 PMID:12756179 PMID:16236765 PMID:18582859 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within ISO (PMID:12072567) MGI PMID:12072567 NCBI chr10:47,332,875...47,369,359
Ensembl chr10:47,332,888...47,343,635 		JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (PMID:11731796) MGI PMID:11731796 NCBI chr 5:57,144,178...57,216,385
Ensembl chr 5:57,145,825...57,214,403 		JBrowse link
G SLC25A25 solute carrier family 25 member 25 acts_upstream_of_or_within ISO (PMID:21296886) MGI PMID:21296886 NCBI chr 9:55,358,348...55,394,624
Ensembl chr 9:55,360,043...55,394,519 		JBrowse link
G SLITRK6 SLIT and NTRK like family member 6 acts_upstream_of_or_within ISO (PMID:23543054) MGI PMID:23543054 NCBI chr22:37,911,533...37,918,273
Ensembl chr22:37,912,612...37,925,177 		JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:37,331,834...37,359,449
Ensembl chr30:37,331,832...37,353,529 		JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14757819) Ensembl
MGI		 PMID:14757819 GO_REF:0000107 NCBI chr24:20,400,647...20,419,652
Ensembl chr24:20,400,791...20,419,655 		JBrowse link
G TBC1D32 TBC1 domain family member 32 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20159594) Ensembl
MGI		 PMID:20159594 GO_REF:0000107 NCBI chr 1:60,662,704...60,873,881
Ensembl chr 1:60,667,721...60,873,614 		JBrowse link
G TMEM231 transmembrane protein 231 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22179047) Ensembl
MGI		 PMID:22179047 GO_REF:0000107 NCBI chr 5:75,246,043...75,266,705
Ensembl chr 5:75,246,043...75,265,021 		JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan acts_upstream_of_or_within ISO (PMID:21856951) MGI PMID:21856951 NCBI chr21:21,910,333...21,927,758
Ensembl chr21:21,915,956...21,928,119 		JBrowse link
G TWSG1 twisted gastrulation BMP signaling modulator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14681194) Ensembl
MGI		 PMID:14681194 GO_REF:0000107 NCBI chr 7:75,337,347...75,397,485
Ensembl chr 7:75,335,235...75,398,325 		JBrowse link
G VAX1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15905411) Ensembl
MGI		 PMID:15905411 GO_REF:0000107 NCBI chr28:27,624,699...27,628,736
Ensembl chr28:27,623,971...27,628,717 		JBrowse link
G VAX2 ventral anterior homeobox 2 acts_upstream_of_or_within ISO (PMID:15905411) MGI PMID:15905411 NCBI chr10:69,252,926...69,262,225 JBrowse link
G VSX2 visual system homeobox 2 acts_upstream_of_or_within ISO (PMID:15576400) MGI PMID:15576400 NCBI chr 8:47,455,337...47,473,786
Ensembl chr 8:47,455,340...47,473,684 		JBrowse link
G WDPCP WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24302887) Ensembl
MGI		 PMID:24302887 GO_REF:0000107 NCBI chr10:62,894,818...63,316,555
Ensembl chr10:62,877,527...63,316,345 		JBrowse link
G WT1 WT1 transcription factor acts_upstream_of_or_within ISO (PMID:11889045) MGI PMID:11889045 NCBI chr18:35,099,660...35,148,767
Ensembl chr18:35,103,934...35,148,000 		JBrowse link
amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BARHL2 BarH like homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14998930) Ensembl
MGI		 PMID:14998930 GO_REF:0000107 NCBI chr 6:57,971,077...57,977,197
Ensembl chr 6:57,971,018...57,977,211 		JBrowse link
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:17092954) MGI PMID:17092954
G FOXN4 forkhead box N4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15363391) Ensembl
MGI		 PMID:15363391 GO_REF:0000107 NCBI chr26:17,730,638...17,757,173
Ensembl chr26:17,728,878...17,755,602 		JBrowse link
G GDF11 growth differentiation factor 11 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15976303) Ensembl
MGI		 PMID:15976303 GO_REF:0000107 NCBI chr10:142,039...152,537
Ensembl chr10:145,036...148,373 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16038893) Ensembl
MGI		 PMID:16038893 GO_REF:0000107
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:25654255) MGI PMID:25654255 NCBI chr18:1,661,851...1,750,987
Ensembl chr18:1,661,690...1,770,768 		JBrowse link
G NEUROD1 neuronal differentiation 1 involved_in ISO (PMID:11861467) UniProt PMID:11861467 NCBI chr36:24,853,591...24,857,886 JBrowse link
G NEUROD4 neuronal differentiation 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:384,809...396,731
Ensembl chr27:389,095...390,090 		JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17301087) Ensembl
MGI		 PMID:17301087 GO_REF:0000107 NCBI chr 2:10,069,594...10,071,360
Ensembl chr 2:10,069,581...10,071,336 		JBrowse link
G RORB RAR related orphan receptor B involved_in ISO (PMID:23652001) UniProt PMID:23652001 NCBI chr 1:83,470,569...83,666,200
Ensembl chr 1:83,476,816...83,666,061 		JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of ISO (PMID:18973577) MGI PMID:18973577 NCBI chr 7:70,040,376...70,048,346
Ensembl chr 7:70,040,508...70,047,912 		JBrowse link
G TGIF2 TGFB induced factor homeobox 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:18926818) Ensembl
MGI		 PMID:18926818 GO_REF:0000107 NCBI chr24:25,360,363...25,375,531
Ensembl chr24:25,364,357...25,373,302 		JBrowse link
camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27687499) MGI
Ensembl		 PMID:27687499 GO_REF:0000107 NCBI chr20:26,589,529...26,749,422
Ensembl chr20:26,588,654...26,748,604 		JBrowse link
G AQP1 aquaporin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11891232) MGI
Ensembl		 PMID:11891232 GO_REF:0000107 NCBI chr14:43,592,266...43,603,903
Ensembl chr14:43,578,721...43,605,720 		JBrowse link
G AQP5 aquaporin 5 acts_upstream_of_or_within ISO (PMID:11891232) MGI PMID:11891232 NCBI chr27:4,735,313...4,742,975
Ensembl chr27:4,735,538...4,737,650 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9268572) Ensembl
MGI		 PMID:9268572 GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16854970)
(PMID:16154126)		 Ensembl
MGI		 PMID:16154126 PMID:16854970 GO_REF:0000107 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653 		JBrowse link
G C27H12orf57 chromosome 27 C12orf57 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:38,101,705...38,103,553
Ensembl chr27:38,101,786...38,127,910
Ensembl chr27:38,101,786...38,127,910 		JBrowse link
G CMSS1 cms1 ribosomal small subunit homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:6,442,721...6,818,394
Ensembl chr33:6,443,035...6,818,171 		JBrowse link
G COL8A1 collagen type VIII alpha 1 chain acts_upstream_of_or_within ISO (PMID:16051690) MGI PMID:16051690 NCBI chr33:6,285,742...6,428,172
Ensembl chr33:6,285,415...6,425,414 		JBrowse link
G COL8A2 collagen type VIII alpha 2 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16051690) Ensembl
MGI		 PMID:16051690 GO_REF:0000107 NCBI chr15:6,095,872...6,115,538
Ensembl chr15:6,095,728...6,115,538 		JBrowse link
G EPHB1 EPH receptor B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12971893) Ensembl
MGI		 PMID:12971893 GO_REF:0000107 NCBI chr23:31,485,701...31,918,754
Ensembl chr23:31,485,534...31,917,393 		JBrowse link
G EPHB2 EPH receptor B2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12971893) Ensembl
MGI		 PMID:12971893 GO_REF:0000107 NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786 		JBrowse link
G FAT1 FAT atypical cadherin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:44,113,621...44,241,187
Ensembl chr16:44,128,386...44,241,192 		JBrowse link
G GDF11 growth differentiation factor 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15976303) Ensembl
MGI		 PMID:15976303 GO_REF:0000107 NCBI chr10:142,039...152,537
Ensembl chr10:145,036...148,373 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8387379) Ensembl
MGI		 PMID:8387379 GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22627278) Ensembl
MGI		 PMID:22627278 GO_REF:0000107 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692 		JBrowse link
G IFT122 intraflagellar transport 122 involved_in ISO (PMID:19000668) UniProt PMID:19000668 NCBI chr20:5,644,002...5,716,702
Ensembl chr20:5,644,089...5,715,906 		JBrowse link
G MFN2 mitofusin 2 acts_upstream_of_or_within ISO (PMID:16104381) MGI PMID:16104381 NCBI chr 2:84,284,719...84,310,715
Ensembl chr 2:84,284,719...84,308,225 		JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728677) Ensembl
MGI		 PMID:15728677 GO_REF:0000107 NCBI chr 5:14,228,197...14,292,825
Ensembl chr 5:14,228,197...14,315,060 		JBrowse link
G NF1 neurofibromin 1 acts_upstream_of_or_within ISO (PMID:7926784) MGI PMID:7926784 NCBI chr 9:41,467,460...41,679,388
Ensembl chr 9:41,469,416...41,679,382 		JBrowse link
G RING1 ring finger protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16624538) Ensembl
MGI		 PMID:16624538 GO_REF:0000107 NCBI chr12:2,671,578...2,675,488
Ensembl chr12:2,671,578...2,675,488 		JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (PMID:17003410) MGI PMID:17003410 NCBI chr 5:57,144,178...57,216,385
Ensembl chr 5:57,145,825...57,214,403 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IBA GO_Central GO_REF:0000033
G SOX12 SRY-box transcription factor 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr24:20,509,931...20,515,013
Ensembl chr24:20,513,567...20,514,532 		JBrowse link
G SOX4 SRY-box transcription factor 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr35:20,098,783...20,101,357
Ensembl chr35:20,099,773...20,101,154 		JBrowse link
G TENM3 teneurin transmembrane protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:47,440,673...47,883,311
Ensembl chr16:47,441,348...48,044,322
Ensembl chr16:47,441,348...48,044,322 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16251428) Ensembl
MGI		 PMID:16251428 GO_REF:0000107 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965 		JBrowse link
G VHL von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO (PMID:22627278) MGI PMID:22627278 NCBI chr20:8,206,616...8,211,347
Ensembl chr20:8,206,616...8,211,323 		JBrowse link
G YY1 YY1 transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16624538) Ensembl
MGI		 PMID:16624538 GO_REF:0000107 NCBI chr 8:68,539,511...68,572,796
Ensembl chr 8:68,539,353...68,568,058 		JBrowse link
camera-type eye photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PROM1 prominin 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:64,229,487...64,362,346
Ensembl chr 3:64,260,685...64,382,009 		JBrowse link
G ROM1 retinal outer segment membrane protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20300562) Ensembl
MGI		 PMID:20300562 GO_REF:0000107 NCBI chr18:54,025,603...54,027,803
Ensembl chr18:54,025,606...54,027,375 		JBrowse link
G SDK2 sidekick cell adhesion molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:6,788,305...6,868,052
Ensembl chr 9:6,734,504...6,867,078 		JBrowse link
G SLC4A7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO (PMID:12808454) MGI PMID:12808454 NCBI chr23:16,710,649...16,788,277
Ensembl chr23:16,710,701...16,785,541 		JBrowse link
G TTC8 tetratricopeptide repeat domain 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21646512) Ensembl
MGI		 PMID:21646512 GO_REF:0000107 NCBI chr 8:60,061,670...60,115,464
Ensembl chr 8:60,061,732...60,115,075 		JBrowse link
camera-type eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18582859) Ensembl
MGI		 PMID:18582859 GO_REF:0000107 NCBI chr37:25,616,942...25,622,989 JBrowse link
ciliary body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXE3 forkhead box E3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:13,291,160...13,295,982 JBrowse link
G JAG1 jagged canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23676271) Ensembl
MGI		 PMID:23676271 GO_REF:0000107 NCBI chr24:11,656,926...11,693,146
Ensembl chr24:11,657,416...11,692,199 		JBrowse link
G NOTCH2 notch receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23676271) Ensembl
MGI		 PMID:23676271 GO_REF:0000107 NCBI chr17:56,854,825...57,020,157
Ensembl chr17:56,860,429...57,020,857 		JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan acts_upstream_of_or_within ISO (PMID:21856951) MGI PMID:21856951 NCBI chr21:21,910,333...21,927,758
Ensembl chr21:21,915,956...21,928,119 		JBrowse link
G VHL von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO (PMID:22627278) MGI PMID:22627278 NCBI chr20:8,206,616...8,211,347
Ensembl chr20:8,206,616...8,211,323 		JBrowse link
closure of optic fissure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHACTR4 phosphatase and actin regulator 4 involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr 2:71,982,524...72,079,916
Ensembl chr 2:71,984,730...72,080,194 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IEA Ensembl GO_REF:0000107
cone retinal bipolar cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BBS10 Bardet-Biedl syndrome 10 involved_in IEA Ensembl GO_REF:0000107
G GNAT2 G protein subunit alpha transducin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23580486)
(PMID:29518352)		 Ensembl
MGI		 PMID:23580486 PMID:29518352 GO_REF:0000107 NCBI chr 6:42,259,404...42,271,197
Ensembl chr 6:42,259,702...42,268,082 		JBrowse link
G LOC100688777 Bardet-Biedl syndrome 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:36125046) MGI
Ensembl		 PMID:36125046 GO_REF:0000107 NCBI chr15:19,302,988...19,334,763
Ensembl chr15:19,331,876...19,335,583 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26607664) Ensembl
MGI		 PMID:26607664 GO_REF:0000107 NCBI chr 9:20,407,296...20,414,094
Ensembl chr 9:20,407,281...20,414,056 		JBrowse link
G NDP norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO (PMID:9071226) MGI PMID:9071226 NCBI chr  X:37,949,560...37,975,573
Ensembl chr  X:37,950,489...37,975,346 		JBrowse link
cornea development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27687499) MGI
Ensembl		 PMID:27687499 GO_REF:0000107 NCBI chr20:26,589,529...26,749,422
Ensembl chr20:26,588,654...26,748,604 		JBrowse link
G FOXE3 forkhead box E3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:13,291,160...13,295,982 JBrowse link
G KERA keratocan involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10802664) Ensembl
MGI		 PMID:10802664 GO_REF:0000107 NCBI chr15:31,750,768...31,758,588
Ensembl chr15:31,670,924...31,758,871 		JBrowse link
G KRT12 keratin 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8977471) Ensembl
MGI		 PMID:8977471 GO_REF:0000107 NCBI chr 9:21,823,976...21,829,557
Ensembl chr 9:21,823,976...21,829,550 		JBrowse link
G LIMK2 LIM domain kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26234751) Ensembl
MGI		 PMID:26234751 GO_REF:0000107 NCBI chr26:24,182,595...24,242,429
Ensembl chr26:24,146,005...24,240,653 		JBrowse link
G PAX6 paired box 6 involved_in IEA Ensembl GO_REF:0000107
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:11,327,086...11,437,799
Ensembl chr27:11,426,647...11,437,303 		JBrowse link
G RNF185 ring finger protein 185 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:24,146,172...24,177,747
Ensembl chr26:24,146,005...24,240,653 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IEA Ensembl GO_REF:0000107
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:16186342) MGI PMID:16186342 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270 		JBrowse link
G TWIST2 twist family bHLH transcription factor 2 acts_upstream_of_or_within ISO (PMID:20574024) MGI PMID:20574024 NCBI chr25:49,165,450...49,216,545
Ensembl chr25:49,165,641...49,166,123 		JBrowse link
embryonic camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17184764) Ensembl
MGI		 PMID:17184764 GO_REF:0000107 NCBI chr30:23,074,432...23,170,374
Ensembl chr30:23,074,432...23,340,030 		JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17184764) Ensembl
MGI		 PMID:17184764 GO_REF:0000107 NCBI chr 3:40,130,904...40,168,686
Ensembl chr 3:40,132,726...40,168,664 		JBrowse link
G CDK20 cyclin dependent kinase 20 acts_upstream_of_or_within ISO (PMID:28817564) MGI PMID:28817564 NCBI chr 1:97,623,126...97,662,668
Ensembl chr 1:97,622,998...97,662,662 		JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15958512) Ensembl
MGI		 PMID:15958512 GO_REF:0000107 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18791178) Ensembl
MGI		 PMID:18791178 GO_REF:0000107 NCBI chr37:16,123,788...16,126,634
Ensembl chr37:16,123,798...16,125,567 		JBrowse link
G IFT140 intraflagellar transport 140 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23469164) Ensembl
MGI		 PMID:23469164 GO_REF:0000107 NCBI chr 6:39,262,887...39,308,912
Ensembl chr 6:39,295,045...39,308,758 		JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (PMID:10572050)
(PMID:10498698)		 MGI PMID:10498698 PMID:10572050 NCBI chr32:30,710,161...30,730,162
Ensembl chr32:30,710,685...30,730,273 		JBrowse link
G PPP1R13L protein phosphatase 1 regulatory subunit 13 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15661756) Ensembl
MGI		 PMID:15661756 GO_REF:0000107 NCBI chr 1:110,149,393...110,166,029
Ensembl chr 1:110,156,749...110,165,915 		JBrowse link
G RARA retinoic acid receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7607067) Ensembl
MGI		 PMID:7607067 GO_REF:0000107 NCBI chr 9:22,254,803...22,298,614
Ensembl chr 9:22,254,806...22,289,459 		JBrowse link
G RARG retinoic acid receptor gamma involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7607067) Ensembl
MGI		 PMID:7607067 GO_REF:0000107 NCBI chr27:1,958,432...1,978,471
Ensembl chr27:1,958,204...1,978,476 		JBrowse link
G RDH10 retinol dehydrogenase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17473173) Ensembl
MGI		 PMID:17473173 GO_REF:0000107 NCBI chr29:21,886,014...21,912,451
Ensembl chr29:21,885,012...21,911,303 		JBrowse link
G TRAF3IP1 TRAF3 interacting protein 1 acts_upstream_of_or_within ISO (PMID:21945076) MGI PMID:21945076 NCBI chr25:48,782,448...48,836,993
Ensembl chr25:48,782,463...48,834,374 		JBrowse link
G TULP3 TUB like protein 3 acts_upstream_of_or_within ISO (PMID:19286674) MGI PMID:19286674 NCBI chr27:41,819,574...41,884,198
Ensembl chr27:41,819,455...41,884,097 		JBrowse link
G WDR19 WD repeat domain 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22228095) Ensembl
MGI		 PMID:22228095 GO_REF:0000107 NCBI chr 3:73,115,560...73,213,823
Ensembl chr 3:73,137,250...73,221,512 		JBrowse link
embryonic camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:37,331,834...37,359,449
Ensembl chr30:37,331,832...37,353,529 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107
embryonic camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10049573) Ensembl
MGI		 PMID:10049573 GO_REF:0000107 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18653562) Ensembl
MGI		 PMID:18653562 GO_REF:0000107 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995 		JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within ISO (PMID:18056999) MGI PMID:18056999 NCBI chr31:37,307,070...37,310,262
Ensembl chr31:37,307,093...37,310,247 		JBrowse link
G FOXF2 forkhead box F2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:1,841,165...1,846,649
Ensembl chr35:1,841,123...1,846,663 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:16,123,788...16,126,634
Ensembl chr37:16,123,798...16,125,567 		JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:51,732,079...51,783,534
Ensembl chr17:51,732,016...51,781,063 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:9,066,957...9,256,916
Ensembl chr16:9,066,970...9,244,526 		JBrowse link
G IFT122 intraflagellar transport 122 acts_upstream_of_or_within ISO (PMID:28778798) MGI PMID:28778798 NCBI chr20:5,644,002...5,716,702
Ensembl chr20:5,644,089...5,715,906 		JBrowse link
G IFT172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28778798) Ensembl
MGI		 PMID:28778798 GO_REF:0000107 NCBI chr17:21,389,462...21,426,970
Ensembl chr17:21,389,482...21,426,796 		JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18582859) Ensembl
MGI		 PMID:18582859 GO_REF:0000107 NCBI chr37:25,616,942...25,622,989 JBrowse link
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:7,625,857...7,746,049
Ensembl chr26:7,598,931...7,745,113 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:18985738)
(PMID:19653321)		 MGI PMID:18985738 PMID:19653321 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18653562) Ensembl
MGI		 PMID:18653562 GO_REF:0000107
G SP1 Sp1 transcription factor acts_upstream_of_or_within ISO (PMID:17584888) MGI PMID:17584888 NCBI chr27:1,802,587...1,861,187
Ensembl chr27:1,805,184...1,847,226 		JBrowse link
G SP3 Sp3 transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17584888) Ensembl
MGI		 PMID:17584888 GO_REF:0000107 NCBI chr36:18,023,750...18,086,995
Ensembl chr36:18,024,627...18,077,587 		JBrowse link
G TBX2 T-box transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:35,237,323...35,245,066
Ensembl chr 9:35,235,649...35,245,736 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:9811866) MGI PMID:9811866 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270 		JBrowse link
G TH tyrosine hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:46,327,136...46,334,973
Ensembl chr18:46,327,137...46,335,602 		JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18436818) Ensembl
MGI		 PMID:18436818 GO_REF:0000107 NCBI chr 2:15,300,401...15,481,535
Ensembl chr 2:15,299,723...15,481,495 		JBrowse link
embryonic retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDON cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19754878) Ensembl
MGI		 PMID:19754878 GO_REF:0000107 NCBI chr 5:8,439,606...8,536,088
Ensembl chr 5:8,446,346...8,533,426 		JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:51,732,079...51,783,534
Ensembl chr17:51,732,016...51,781,063 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:9,066,957...9,256,916
Ensembl chr16:9,066,970...9,244,526 		JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19653321) MGI PMID:19653321 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036 		JBrowse link
G RBP4 retinol binding protein 4 involved_in ISO (PMID:10469643) BHF-UCL PMID:10469643 NCBI chr28:7,822,936...7,830,735
Ensembl chr28:7,822,944...7,830,750 		JBrowse link
establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAT1 FAT atypical cadherin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:44,113,621...44,241,187
Ensembl chr16:44,128,386...44,241,192 		JBrowse link
extraocular skeletal muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1S calcium voltage-gated channel subunit alpha1 S involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14618389) Ensembl
MGI		 PMID:14618389 GO_REF:0000107 NCBI chr 7:2,108,716...2,172,246
Ensembl chr 7:2,108,455...2,303,220 		JBrowse link
G FOXL2 forkhead box L2 involved_in ISO (PMID:12630957) UniProt PMID:12630957 NCBI chr23:35,145,856...35,147,185 JBrowse link
G MYH15 myosin heavy chain 15 ISO RGD PMID:19948655 RGD:2317122 NCBI chr33:13,620,132...13,758,477
Ensembl chr33:13,620,520...13,758,862 		JBrowse link
G MYOM1 myomesin 1 ISO RGD PMID:12878677 RGD:633368 NCBI chr 7:69,703,057...69,837,987
Ensembl chr 7:69,703,540...69,857,740 		JBrowse link
G MYOM2 myomesin 2 ISO RGD PMID:12878677 RGD:633368 NCBI chr16:54,379,342...54,392,955 JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (PMID:16638982)
(PMID:21035439)		 MGI PMID:16638982 PMID:21035439 NCBI chr32:30,710,161...30,730,162
Ensembl chr32:30,710,685...30,730,273 		JBrowse link
eyelid development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGFR epidermal growth factor receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9030684) Ensembl
MGI		 PMID:9030684 GO_REF:0000107 NCBI chr18:5,983,669...6,044,092
Ensembl chr18:5,982,770...6,042,631 		JBrowse link
G GRHL3 grainyhead like transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21262862) Ensembl
MGI		 PMID:21262862 GO_REF:0000107 NCBI chr 2:75,290,594...75,324,593
Ensembl chr 2:75,290,596...75,324,496 		JBrowse link
G HDAC1 histone deacetylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:68,901,339...68,936,473
Ensembl chr 2:68,901,651...68,936,186 		JBrowse link
G HDAC2 histone deacetylase 2 involved_in ISO (PMID:21093383) BHF-UCL PMID:21093383 NCBI chr12:70,053,822...70,083,491
Ensembl chr12:70,053,297...70,103,578 		JBrowse link
G INHBA inhibin subunit beta A involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:8,272,978...8,288,432
Ensembl chr18:8,272,872...8,283,794 		JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:25224220) MGI PMID:25224220 NCBI chr 5:50,966,698...50,968,939 JBrowse link
G KMT2C lysine methyltransferase 2C acts_upstream_of_or_within ISO (PMID:17021013) MGI PMID:17021013 NCBI chr16:15,962,045...16,117,601
Ensembl chr16:15,963,901...16,158,408 		JBrowse link
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 acts_upstream_of_or_within ISO (PMID:23201579), (PMID:25224220) MGI PMID:23201579 PMID:25224220 NCBI chr 2:43,918,210...43,996,817
Ensembl chr 2:43,917,604...43,995,209 		JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:1,019,167...1,031,622
Ensembl chr13:1,023,879...1,031,225 		JBrowse link
G PRICKLE1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:11,327,086...11,437,799
Ensembl chr27:11,426,647...11,437,303 		JBrowse link
G SOS1 SOS Ras/Rac guanine nucleotide exchange factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9030684) Ensembl
MGI		 PMID:9030684 GO_REF:0000107 NCBI chr17:31,007,940...31,181,569
Ensembl chr17:31,009,257...31,142,063 		JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IEA Ensembl GO_REF:0000107
G SRF serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20047077) Ensembl
MGI		 PMID:20047077 GO_REF:0000107 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533 		JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:37,331,834...37,359,449
Ensembl chr30:37,331,832...37,353,529 		JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISO (PMID:9811866) UniProt PMID:9811866 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107
hyaloid vascular plexus regression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DRD2 dopamine receptor D2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:19,732,842...19,795,241
Ensembl chr 5:19,732,836...19,795,241 		JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 involved_in ISO (PMID:30936473) UniProt PMID:30936473 NCBI chr25:11,231,958...11,410,379
Ensembl chr25:11,231,737...11,407,621 		JBrowse link
G NINJ1 ninjurin 1 acts_upstream_of_or_within ISO (PMID:19557008) MGI PMID:19557008 NCBI chr 1:98,566,520...98,576,668
Ensembl chr 1:98,567,680...98,576,657 		JBrowse link
G OPN4 opsin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:34,350,058...34,365,410
Ensembl chr 4:34,355,128...34,365,215 		JBrowse link
G OPN5 opsin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:15,831,311...15,858,121
Ensembl chr12:15,831,311...15,877,721 		JBrowse link
G SLC17A6 solute carrier family 17 member 6 involved_in ISO (PMID:30936473) UniProt PMID:30936473 NCBI chr21:44,015,161...44,056,286
Ensembl chr21:44,016,133...44,054,931 		JBrowse link
G SLC6A3 solute carrier family 6 member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:11,209,118...11,245,456
Ensembl chr34:11,210,939...11,246,742 		JBrowse link
G TH tyrosine hydroxylase involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr18:46,327,136...46,334,973
Ensembl chr18:46,327,137...46,335,602 		JBrowse link
iris morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXE3 forkhead box E3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:13,291,160...13,295,982 JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22627278) Ensembl
MGI		 PMID:22627278 GO_REF:0000107 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692 		JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:51,732,079...51,783,534
Ensembl chr17:51,732,016...51,781,063 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:9,066,957...9,256,916
Ensembl chr16:9,066,970...9,244,526 		JBrowse link
G PAX6 paired box 6 involved_in IEA Ensembl GO_REF:0000107
G PITX2 paired like homeodomain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:30,710,161...30,730,162
Ensembl chr32:30,710,685...30,730,273 		JBrowse link
G VHL von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO (PMID:22627278) MGI PMID:22627278 NCBI chr20:8,206,616...8,211,347
Ensembl chr20:8,206,616...8,211,323 		JBrowse link
lens development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27687499) MGI
Ensembl		 PMID:27687499 GO_REF:0000107 NCBI chr20:26,589,529...26,749,422
Ensembl chr20:26,588,654...26,748,604 		JBrowse link
G BIRC7 baculoviral IAP repeat containing 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:26218911) MGI
Ensembl		 PMID:26218911 GO_REF:0000107 NCBI chr24:46,950,700...46,956,375
Ensembl chr24:46,952,474...46,955,495 		JBrowse link
G CASP6 caspase 6 ISO RGD PMID:15161922 RGD:2301319 NCBI chr32:29,897,706...29,910,522
Ensembl chr32:29,897,823...29,911,469 		JBrowse link
G CDK2 cyclin dependent kinase 2 ISO RGD PMID:10620399 RGD:724665 NCBI chr10:300,863...306,546
Ensembl chr10:300,903...305,438 		JBrowse link
G CDK4 cyclin dependent kinase 4 ISO RGD PMID:10620399 RGD:724665 NCBI chr10:1,812,864...1,815,815
Ensembl chr10:1,812,886...1,815,789 		JBrowse link
G CDON cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19754878) Ensembl
MGI		 PMID:19754878 GO_REF:0000107 NCBI chr 5:8,439,606...8,536,088
Ensembl chr 5:8,446,346...8,533,426 		JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:16439475), (PMID:9023351)
(PMID:11687536)		 RGD
MGI
GO_Central		 PMID:8187157 PMID:9023351 PMID:11687536 PMID:16439475 GO_REF:0000033 RGD:1600991 NCBI chr31:37,307,070...37,310,262
Ensembl chr31:37,307,093...37,310,247 		JBrowse link
G CRYAB crystallin alpha B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16439475) Ensembl
MGI		 PMID:16439475 GO_REF:0000107 NCBI chr 5:21,181,836...21,185,164
Ensembl chr 5:21,179,936...21,360,132 		JBrowse link
G CRYBA1 crystallin beta A1 involved_in ISO
IBA		 RGD
GO_Central		 PMID:2753045 GO_REF:0000033 RGD:1298814 NCBI chr 9:43,372,507...43,378,561
Ensembl chr 9:43,372,505...43,378,590 		JBrowse link
G CRYBA2 crystallin beta A2 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:21212184) Ensembl
GO_Central
MGI		 PMID:21212184 GO_REF:0000033 GO_REF:0000107 NCBI chr37:25,556,308...25,567,952
Ensembl chr37:25,556,303...25,564,284 		JBrowse link
G CRYBA4 crystallin beta A4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr26:20,272,962...20,280,368
Ensembl chr26:20,273,739...20,280,367 		JBrowse link
G CRYBB1 crystallin beta B1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr26:20,258,873...20,269,647
Ensembl chr26:20,258,877...20,287,217 		JBrowse link
G CRYBB2 crystallin beta B2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr26:19,298,947...19,308,447
Ensembl chr26:19,298,863...19,308,400 		JBrowse link
G CRYBB3 crystallin beta B3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr26:19,276,101...19,291,412
Ensembl chr26:19,284,927...19,291,421 		JBrowse link
G CRYBG3 crystallin beta-gamma domain containing 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr33:4,864,458...4,967,707
Ensembl chr33:4,864,458...4,966,440 		JBrowse link
G CRYGA crystallin gamma A acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (PMID:6510713), (PMID:6877261)
(PMID:7088001), (PMID:8034315)		 RGD
MGI
GO_Central
Ensembl		 PMID:2338125 PMID:6510713 PMID:6877261 PMID:7088001 PMID:8034315 GO_REF:0000033 GO_REF:0000107 RGD:2303725 NCBI chr37:16,453,644...16,457,116
Ensembl chr37:16,453,713...16,455,542 		JBrowse link
G CRYGB crystallin gamma B acts_upstream_of_or_within ISO (PMID:18172107)
(PMID:12426373), (PMID:8626090)		 RGD
MGI		 PMID:2338125 PMID:8626090 PMID:12426373 PMID:18172107 RGD:2303725 NCBI chr37:16,440,804...16,442,823
Ensembl chr37:16,440,805...16,442,912 		JBrowse link
G CRYGC crystallin gamma C involved_in ISO
IBA		 RGD
GO_Central		 PMID:2338125 GO_REF:0000033 RGD:2303725 Ensembl chr37:16,424,884...16,482,227 JBrowse link
G CRYGD crystallin, gamma D involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:10704279)
(PMID:17652744)		 RGD
GO_Central
MGI		 PMID:2338125 PMID:10704279 PMID:17652744 GO_REF:0000033 RGD:2303725 NCBI chr37:16,424,884...16,433,479 JBrowse link
G CRYGN crystallin gamma N involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:15,416,628...15,427,664
Ensembl chr16:15,414,814...15,422,940 		JBrowse link
G CRYGS crystallin gamma S involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 (PMID:6877261), (PMID:8034315) GO_Central
Ensembl
MGI		 PMID:6877261 PMID:8034315 GO_REF:0000033 GO_REF:0000107 NCBI chr34:19,157,116...19,163,349
Ensembl chr34:19,157,109...19,163,349 		JBrowse link
G CTNS cystinosin, lysosomal cystine transporter involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21897743) Ensembl
MGI		 PMID:21897743 GO_REF:0000107 NCBI chr 9:47,474,488...47,490,951
Ensembl chr 9:47,473,901...47,490,252 		JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14645510) Ensembl
MGI		 PMID:14645510 GO_REF:0000107 NCBI chr33:30,016,323...30,253,180
Ensembl chr33:30,016,600...30,253,547 		JBrowse link
G FAT1 FAT atypical cadherin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:44,113,621...44,241,187
Ensembl chr16:44,128,386...44,241,192 		JBrowse link
G FOXE3 forkhead box E3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:13,291,160...13,295,982 JBrowse link
G FRS2 fibroblast growth factor receptor substrate 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23136392) Ensembl
MGI		 PMID:23136392 GO_REF:0000107 NCBI chr10:11,445,843...11,552,325
Ensembl chr10:11,539,994...11,552,890 		JBrowse link
G GATA3 GATA binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19623612) Ensembl
MGI		 PMID:19623612 GO_REF:0000107 NCBI chr 2:28,068,143...28,098,445
Ensembl chr 2:28,069,051...28,087,760 		JBrowse link
G GJA1 gap junction protein alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9620080) Ensembl
MGI		 PMID:9620080 GO_REF:0000107 NCBI chr 1:60,941,772...60,944,694
Ensembl chr 1:60,929,097...60,942,936 		JBrowse link
G GJA8 gap junction protein alpha 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:6877261) Ensembl
MGI		 PMID:6877261 GO_REF:0000107 NCBI chr17:58,360,313...58,428,751
Ensembl chr17:58,424,072...58,425,391 		JBrowse link
G GJE1 gap junction protein epsilon 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18385072) Ensembl
MGI		 PMID:18385072 GO_REF:0000107
G LIM2 lens intrinsic membrane protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:6510713), (PMID:6877261), (PMID:7088001), (PMID:8812411) Ensembl
MGI		 PMID:6510713 PMID:6877261 PMID:7088001 PMID:8812411 GO_REF:0000107 NCBI chr 1:105,593,457...105,599,788
Ensembl chr 1:105,593,224...105,599,650 		JBrowse link
G LOC609894 gamma-crystallin F involved_in IBA GO_Central GO_REF:0000033 NCBI chr37:16,415,044...16,418,271 JBrowse link
G MAF MAF bZIP transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10383433)
(PMID:12835653)
(PMID:10603348)		 Ensembl
MGI		 PMID:10383433 PMID:10603348 PMID:12835653 GO_REF:0000107 NCBI chr 5:71,965,291...71,982,903
Ensembl chr 5:71,965,500...71,981,735 		JBrowse link
G MED1 mediator complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,989,257...23,019,350
Ensembl chr 9:22,989,301...23,019,349 		JBrowse link
G MIP major intrinsic protein of lens fiber involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7333462) Ensembl
MGI		 PMID:7333462 GO_REF:0000107 NCBI chr10:701,385...707,005
Ensembl chr10:701,387...706,151 		JBrowse link
G NDP norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO (PMID:15716406) MGI PMID:15716406 NCBI chr  X:37,949,560...37,975,573
Ensembl chr  X:37,950,489...37,975,346 		JBrowse link
G NHS NHS actin remodeling regulator involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:8282045) Ensembl
GO_Central
MGI		 PMID:8282045 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:13,487,919...13,834,869
Ensembl chr  X:13,488,515...13,831,386 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:6877261) Ensembl
MGI		 PMID:6877261 GO_REF:0000107
G PDS5A PDS5 cohesin associated factor A acts_upstream_of_or_within ISO (PMID:19412548) MGI PMID:19412548 NCBI chr 3:72,521,839...72,673,164
Ensembl chr 3:72,521,868...72,673,164 		JBrowse link
G PDS5B PDS5 cohesin associated factor B acts_upstream_of_or_within ISO (PMID:19412548) MGI PMID:19412548 NCBI chr25:7,407,533...7,587,177
Ensembl chr25:7,410,481...7,586,563 		JBrowse link
G PITX3 paired like homeodomain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:14,760,741...14,775,584
Ensembl chr28:14,761,094...14,762,716 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036 		JBrowse link
G PYGO2 pygopus family PHD finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17425782) Ensembl
MGI		 PMID:17425782 GO_REF:0000107 NCBI chr 7:42,509,760...42,513,744
Ensembl chr 7:42,509,968...42,512,091 		JBrowse link
G SIX3 SIX homeobox 3 involved_in ISO (PMID:11139622) UniProt PMID:11139622 NCBI chr10:47,332,875...47,369,359
Ensembl chr10:47,332,888...47,343,635 		JBrowse link
G SIX5 SIX homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10802668)
(PMID:10802667)		 Ensembl
MGI		 PMID:10802667 PMID:10802668 GO_REF:0000107 NCBI chr 1:109,835,781...109,839,925
Ensembl chr 1:109,835,577...109,837,921 		JBrowse link
G SLITRK6 SLIT and NTRK like family member 6 acts_upstream_of_or_within ISO (PMID:23543054) MGI PMID:23543054 NCBI chr22:37,911,533...37,918,273
Ensembl chr22:37,912,612...37,925,177 		JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24239381) Ensembl
MGI		 PMID:24239381 GO_REF:0000107 NCBI chr24:20,400,647...20,419,652
Ensembl chr24:20,400,791...20,419,655 		JBrowse link
G TBC1D32 TBC1 domain family member 32 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20159594) Ensembl
MGI		 PMID:20159594 GO_REF:0000107 NCBI chr 1:60,662,704...60,873,881
Ensembl chr 1:60,667,721...60,873,614 		JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11641223) Ensembl
MGI		 PMID:11641223 GO_REF:0000107 NCBI chr11:56,191,383...56,223,042
Ensembl chr11:56,161,772...56,218,594 		JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11641223) Ensembl
MGI		 PMID:11641223 GO_REF:0000107 NCBI chr23:13,886,869...13,946,480
Ensembl chr23:13,889,000...13,977,636 		JBrowse link
lens fiber cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BFSP1 beaded filament structural protein 1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:15037121) MGI
GO_Central		 PMID:15037121 GO_REF:0000033 NCBI chr24:5,432,098...5,500,278
Ensembl chr24:5,439,512...5,499,307 		JBrowse link
G BFSP2 beaded filament structural protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15037121), (PMID:17065509) Ensembl
MGI		 PMID:15037121 PMID:17065509 GO_REF:0000107 NCBI chr23:30,334,080...30,394,202
Ensembl chr23:29,992,021...30,396,840 		JBrowse link
G CRYGB crystallin gamma B acts_upstream_of_or_within ISO (PMID:18172107) MGI PMID:18172107 NCBI chr37:16,440,804...16,442,823
Ensembl chr37:16,440,805...16,442,912 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:23136392)
(PMID:18455718)		 MGI PMID:18455718 PMID:23136392 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:18455718) MGI PMID:18455718 NCBI chr 3:62,309,128...62,318,932
Ensembl chr 3:62,303,756...62,323,896 		JBrowse link
G FRS2 fibroblast growth factor receptor substrate 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23136392) Ensembl
MGI		 PMID:23136392 GO_REF:0000107 NCBI chr10:11,445,843...11,552,325
Ensembl chr10:11,539,994...11,552,890 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (PMID:21118511) MGI PMID:21118511 NCBI chr20:50,175,489...50,268,865
Ensembl chr20:50,175,687...50,268,836 		JBrowse link
G TMOD1 tropomodulin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:54,853,205...54,914,236
Ensembl chr11:54,853,204...54,912,773 		JBrowse link
G VIM vimentin acts_upstream_of_or_within ISO (PMID:15037121) MGI PMID:15037121 NCBI chr 2:19,671,316...19,679,367
Ensembl chr 2:19,671,316...19,679,466 		JBrowse link
lens fiber cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B9D2 B9 domain containing 2 acts_upstream_of_or_within ISO (PMID:17215516) MGI PMID:17215516 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
G CRYGD crystallin, gamma D acts_upstream_of_or_within ISO (PMID:17652744) RGD
MGI		 PMID:8575616 PMID:17652744 RGD:1601018 NCBI chr37:16,424,884...16,433,479 JBrowse link
G FZR1 fizzy and cell division cycle 20 related 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17215516) Ensembl
MGI		 PMID:17215516 GO_REF:0000107 NCBI chr20:55,866,893...55,877,077
Ensembl chr20:55,869,693...55,876,936 		JBrowse link
G HSF4 heat shock transcription factor 4 involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:82,190,996...82,201,224
Ensembl chr 5:82,196,500...82,201,151
Ensembl chr 5:82,196,500...82,201,151 		JBrowse link
G KDM5B lysine demethylase 5B ISO RGD PMID:24142921 RGD:9587771 NCBI chr 7:336,452...415,568
Ensembl chr 7:330,705...412,386 		JBrowse link
G MAF MAF bZIP transcription factor involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:10383433)
(PMID:12835653)		 Ensembl
GO_Central
MGI		 PMID:10383433 PMID:12835653 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:71,965,291...71,982,903
Ensembl chr 5:71,965,500...71,981,735 		JBrowse link
G NF2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:22,816,869...22,896,103
Ensembl chr26:22,816,551...22,894,196 		JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (PMID:23136392) MGI PMID:23136392 NCBI chr 3:51,131,470...51,491,112
Ensembl chr 3:51,138,751...51,513,024 		JBrowse link
G PITX3 paired like homeodomain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:14,760,741...14,775,584
Ensembl chr28:14,761,094...14,762,716 		JBrowse link
G PLAAT3 phospholipase A and acyltransferase 3 involved_in ISO (PMID:33854238) UniProt PMID:33854238 NCBI chr18:53,367,441...53,412,165
Ensembl chr18:53,368,030...53,398,290 		JBrowse link
G SIX3 SIX homeobox 3 involved_in ISO (PMID:12072567) UniProt PMID:12072567 NCBI chr10:47,332,875...47,369,359
Ensembl chr10:47,332,888...47,343,635 		JBrowse link
G SKIL SKI like proto-oncogene involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17215516) Ensembl
MGI		 PMID:17215516 GO_REF:0000107 NCBI chr34:34,871,770...34,898,681
Ensembl chr34:34,871,574...34,894,854 		JBrowse link
G SLC7A11 solute carrier family 7 member 11 ISO RGD PMID:16043861 RGD:2315033 NCBI chr19:4,289,792...4,379,060
Ensembl chr19:4,289,850...4,389,048 		JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17215516) Ensembl
MGI		 PMID:17215516 GO_REF:0000107 NCBI chr30:31,246,313...31,360,098
Ensembl chr30:31,245,657...31,363,337 		JBrowse link
G TDRD7 tudor domain containing 7 involved_in ISS
IBA
IEA		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr11:54,758,092...54,828,766
Ensembl chr11:54,758,826...54,828,743 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
lens fiber cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI2 abl interactor 2 involved_in ISO (PMID:15572692) UniProt PMID:15572692 NCBI chr37:12,162,815...12,278,505
Ensembl chr37:12,162,392...12,282,395 		JBrowse link
G ATF4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:25,528,880...25,531,018
Ensembl chr10:25,528,874...25,530,993 		JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within ISO (PMID:16799046)
(PMID:18056999)		 MGI PMID:16799046 PMID:18056999 NCBI chr31:37,307,070...37,310,262
Ensembl chr31:37,307,093...37,310,247 		JBrowse link
G CRYGB crystallin gamma B acts_upstream_of_or_within ISO (PMID:12426373), (PMID:8626090) MGI PMID:8626090 PMID:12426373 NCBI chr37:16,440,804...16,442,823
Ensembl chr37:16,440,805...16,442,912 		JBrowse link
G EPHA2 EPH receptor A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:81,534,130...81,561,722
Ensembl chr 2:81,534,125...81,561,725 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036 		JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24239381) Ensembl
MGI		 PMID:24239381 GO_REF:0000107 NCBI chr24:20,400,647...20,419,652
Ensembl chr24:20,400,791...20,419,655 		JBrowse link
lens induction in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9851982) Ensembl
MGI		 PMID:9851982 GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:51,732,079...51,783,534
Ensembl chr17:51,732,016...51,781,063 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:9,066,957...9,256,916
Ensembl chr16:9,066,970...9,244,526 		JBrowse link
G POU2F1 POU class 2 homeobox 1 acts_upstream_of_or_within ISO (PMID:17140559) MGI PMID:17140559 NCBI chr 7:30,975,303...31,162,288
Ensembl chr 7:30,986,181...31,162,246 		JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within ISO (PMID:17066077) MGI PMID:17066077 NCBI chr10:47,332,875...47,369,359
Ensembl chr10:47,332,888...47,343,635 		JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:17140559) MGI PMID:17140559 NCBI chr34:14,853,000...14,855,153 JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:10571739) MGI PMID:10571739 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270 		JBrowse link
lens morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAR3 BCAR3 adaptor protein, NSP family member involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19365570) Ensembl
MGI		 PMID:19365570 GO_REF:0000107 NCBI chr 6:55,276,300...55,525,246
Ensembl chr 6:55,347,955...55,525,246 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18653562) Ensembl
MGI		 PMID:18653562 GO_REF:0000107 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995 		JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within ISO (PMID:16799046)
(PMID:8812430)		 MGI PMID:8812430 PMID:16799046 NCBI chr31:37,307,070...37,310,262
Ensembl chr31:37,307,093...37,310,247 		JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16102745) Ensembl
MGI		 PMID:16102745 GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927 		JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (PMID:11290300) MGI PMID:11290300 NCBI chr 3:62,309,128...62,318,932
Ensembl chr 3:62,303,756...62,323,896 		JBrowse link
G LCTL lactase like involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:30,808,356...30,827,504
Ensembl chr30:30,808,359...30,822,419 		JBrowse link
G MEIS1 Meis homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14713950) Ensembl
MGI		 PMID:14713950 GO_REF:0000107 NCBI chr10:65,765,498...65,898,714
Ensembl chr10:65,683,560...65,897,573 		JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728677) Ensembl
MGI		 PMID:15728677 GO_REF:0000107 NCBI chr 5:14,228,197...14,292,825
Ensembl chr 5:14,228,197...14,315,060 		JBrowse link
G NECTIN3 nectin cell adhesion molecule 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728677) Ensembl
MGI		 PMID:15728677 GO_REF:0000107 NCBI chr33:15,868,813...16,173,158
Ensembl chr33:15,911,411...15,933,307 		JBrowse link
G NECTIN3 nectin cell adhesion molecule 3 involved_in IEA Ensembl GO_REF:0000107
G PITX3 paired like homeodomain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:14,760,741...14,775,584
Ensembl chr28:14,761,094...14,762,716 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036 		JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (PMID:17003410) MGI PMID:17003410 NCBI chr 5:57,144,178...57,216,385
Ensembl chr 5:57,145,825...57,214,403 		JBrowse link
G SOX1 SRY-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:9512512) MGI PMID:9512512 NCBI chr22:59,902,113...59,903,820 JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IEA Ensembl GO_REF:0000107
G TDRD7 tudor domain containing 7 involved_in IEA
IBA
ISS		 Ensembl
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr11:54,758,092...54,828,766
Ensembl chr11:54,758,826...54,828,743 		JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:18224708), (PMID:9918694) MGI PMID:9918694 PMID:18224708 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270 		JBrowse link
lens placode formation involved in camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FRS2 fibroblast growth factor receptor substrate 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15569927) Ensembl
MGI		 PMID:15569927 GO_REF:0000107 NCBI chr10:11,445,843...11,552,325
Ensembl chr10:11,539,994...11,552,890 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036 		JBrowse link
negative regulation of amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASZ1 castor zinc finger 1 acts_upstream_of_or_within ISO (PMID:25654255) MGI PMID:25654255 NCBI chr 2:85,194,640...85,218,068
Ensembl chr 2:85,176,161...85,232,920 		JBrowse link
G GDF11 growth differentiation factor 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15976303) Ensembl
MGI		 PMID:15976303 GO_REF:0000107 NCBI chr10:142,039...152,537
Ensembl chr10:145,036...148,373 		JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16038893) Ensembl
MGI		 PMID:16038893 GO_REF:0000107
G POU4F2 POU class 4 homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:45,030,818...45,034,446
Ensembl chr15:45,031,094...45,032,784 		JBrowse link
negative regulation of lens fiber cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXE3 forkhead box E3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:13,291,160...13,295,982 JBrowse link
G SPRED1 sprouty related EVH1 domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:5,594,327...5,716,082
Ensembl chr30:5,594,473...5,712,040 		JBrowse link
G SPRED2 sprouty related EVH1 domain containing 2 involved_in ISO (PMID:29501879) UniProt PMID:29501879 NCBI chr10:64,764,275...64,815,937
Ensembl chr10:64,764,311...64,867,009 		JBrowse link
G SPRED3 sprouty related EVH1 domain containing 3 involved_in ISO (PMID:29501879) UniProt PMID:29501879 NCBI chr 1:114,604,265...114,614,764
Ensembl chr 1:114,607,058...114,685,985 		JBrowse link
G SPRY1 sprouty RTK signaling antagonist 1 involved_in ISO (PMID:29501879) UniProt PMID:29501879 NCBI chr19:16,969,869...16,976,573
Ensembl chr19:16,970,904...16,972,089 		JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 involved_in ISO (PMID:29501879) UniProt PMID:29501879 NCBI chr22:33,366,139...33,371,102
Ensembl chr22:33,366,931...33,367,878 		JBrowse link
negative regulation of retinal cone cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASZ1 castor zinc finger 1 acts_upstream_of_or_within ISO (PMID:25654255) MGI PMID:25654255 NCBI chr 2:85,194,640...85,218,068
Ensembl chr 2:85,176,161...85,232,920 		JBrowse link
negative regulation of vasculature development involved in avascular cornea development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGPTL7 angiopoietin like 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,876,881...84,883,582
Ensembl chr 2:84,877,682...84,883,160 		JBrowse link
neural retina development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTL6A actin like 6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:12,922,506...12,988,334
Ensembl chr34:12,960,699...12,987,962 		JBrowse link
G ATOH7 atonal bHLH transcription factor 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21441919) MGI
InterPro
Ensembl		 PMID:21441919 GO_REF:0000002 GO_REF:0000107 NCBI chr 4:19,466,476...19,479,279
Ensembl chr 4:19,478,694...19,479,152 		JBrowse link
G ATP2B1 ATPase plasma membrane Ca2+ transporting 1 ISO RGD PMID:16079002 RGD:2317729 NCBI chr15:30,547,009...30,674,094
Ensembl chr15:30,547,015...30,616,429 		JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 ISO RGD PMID:16079002 RGD:2317729 NCBI chr20:7,665,468...8,037,407
Ensembl chr20:7,749,807...8,034,474 		JBrowse link
G ATP2B3 ATPase plasma membrane Ca2+ transporting 3 ISO RGD PMID:16079002 RGD:2317729 NCBI chr  X:121,355,217...121,405,245
Ensembl chr  X:121,361,239...121,403,609 		JBrowse link
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 ISO RGD PMID:16079002 RGD:2317729 NCBI chr38:321,246...420,262
Ensembl chr38:366,656...416,952 		JBrowse link
G BSG basigin involved_in ISO (PMID:10967074), (PMID:11273674), (PMID:11853760) UniProt PMID:10967074 PMID:11273674 PMID:11853760 NCBI chr20:57,942,703...57,951,089
Ensembl chr20:57,943,276...57,951,061 		JBrowse link
G CASP2 caspase 2 ISO RGD PMID:9809666 RGD:4107085 NCBI chr16:6,378,447...6,396,251
Ensembl chr16:6,379,913...6,396,646 		JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:20589906 RGD:405650605 NCBI chr 8:48,330,856...48,334,273
Ensembl chr 8:48,331,026...48,333,467 		JBrowse link
G GPM6A glycoprotein M6A involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:53,697,830...53,846,773
Ensembl chr16:53,698,043...53,845,259 		JBrowse link
G NDP norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO (PMID:15716406) MGI PMID:15716406 NCBI chr  X:37,949,560...37,975,573
Ensembl chr  X:37,950,489...37,975,346 		JBrowse link
G OPTN optineurin ISO RGD PMID:17687037 RGD:7800681 NCBI chr 2:23,356,471...23,390,569
Ensembl chr 2:23,357,237...23,392,511 		JBrowse link
G PER1 period circadian regulator 1 ISO RGD PMID:20589906 RGD:405650605 NCBI chr 5:32,957,517...32,972,368
Ensembl chr 5:32,957,127...32,968,465 		JBrowse link
G PER2 period circadian regulator 2 ISO RGD PMID:20589906 RGD:405650605 NCBI chr25:48,716,499...48,761,617
Ensembl chr25:48,717,173...48,758,755 		JBrowse link
G PSEN1 presenilin 1 ISO RGD PMID:12401445 RGD:729595 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532 		JBrowse link
G RAB11FIP4 RAB11 family interacting protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:41,336,537...41,416,230
Ensembl chr 9:41,341,877...41,416,176 		JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 ISO RGD PMID:2631392 RGD:9585660 NCBI chr 6:76,887,399...76,911,133
Ensembl chr 6:76,887,399...76,911,131 		JBrowse link
G SLC17A6 solute carrier family 17 member 6 ISO RGD PMID:18482716 RGD:9999162 NCBI chr21:44,015,161...44,056,286
Ensembl chr21:44,016,133...44,054,931 		JBrowse link
G SLC17A7 solute carrier family 17 member 7 ISO RGD PMID:18482716 RGD:9999162 NCBI chr 1:107,054,242...107,064,444
Ensembl chr 1:107,054,410...107,063,550 		JBrowse link
G SLC17A8 solute carrier family 17 member 8 ISO RGD PMID:18482716 RGD:9999162 NCBI chr15:39,443,790...39,489,988
Ensembl chr15:39,443,518...39,486,595 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:50,175,489...50,268,865
Ensembl chr20:50,175,687...50,268,836 		JBrowse link
G SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:15,279,295...15,311,210
Ensembl chr16:15,279,309...15,417,027 		JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in ISO (PMID:9217007) BHF-UCL PMID:9217007 NCBI chr38:13,430,832...13,511,655
Ensembl chr38:13,429,148...13,510,242 		JBrowse link
optic cup formation involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID1A AT-rich interaction domain 1A acts_upstream_of_or_within ISO (PMID:23129809) MGI PMID:23129809 NCBI chr 2:73,331,606...73,401,151
Ensembl chr 2:73,324,852...73,401,102 		JBrowse link
optic cup morphogenesis involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (PMID:16611695) MGI PMID:16611695 NCBI chr 1:84,940,411...84,994,789
Ensembl chr 1:84,940,411...84,994,789 		JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16611695) Ensembl
MGI		 PMID:16611695 GO_REF:0000107 NCBI chr 3:40,130,904...40,168,686
Ensembl chr 3:40,132,726...40,168,664 		JBrowse link
G PAX2 paired box 2 involved_in ISO (PMID:8951055) DFLAT PMID:8951055 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094 		JBrowse link
optic cup structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TFAP2A transcription factor AP-2 alpha involved_in ISO (PMID:20150232) UniProt PMID:20150232 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270 		JBrowse link
optic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX3 SIX homeobox 3 involved_in ISO (PMID:11458394) UniProt PMID:11458394 NCBI chr10:47,332,875...47,369,359
Ensembl chr10:47,332,888...47,343,635 		JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISO (PMID:20150232) UniProt PMID:20150232 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270 		JBrowse link
positive regulation of amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLX1 distal-less homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:16,485,158...16,489,397
Ensembl chr36:16,484,859...16,487,886 		JBrowse link
G DLX2 distal-less homeobox 2 involved_in ISO (PMID:21875655) UniProt PMID:21875655 NCBI chr36:16,499,009...16,502,365
Ensembl chr36:16,484,302...16,502,510 		JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (PMID:18973577) MGI PMID:18973577 NCBI chr 7:70,040,376...70,048,346
Ensembl chr 7:70,040,508...70,047,912 		JBrowse link
G TGIF2 TGFB induced factor homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18926818) Ensembl
MGI		 PMID:18926818 GO_REF:0000107 NCBI chr24:25,360,363...25,375,531
Ensembl chr24:25,364,357...25,373,302 		JBrowse link
positive regulation of lens epithelial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXE3 forkhead box E3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:13,291,160...13,295,982 JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in IEA Ensembl GO_REF:0000107
positive regulation of lens fiber cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF2 fibroblast growth factor 2 involved_in ISO (PMID:29501879) UniProt PMID:29501879 NCBI chr19:17,403,288...17,463,143
Ensembl chr19:16,994,661...17,463,151 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 involved_in ISO (PMID:16162653) UniProt PMID:16162653 NCBI chr19:46,419,812...46,541,888
Ensembl chr19:46,423,998...46,542,122 		JBrowse link
post-embryonic camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL11B BCL11 transcription factor B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12717433) Ensembl
MGI		 PMID:12717433 GO_REF:0000107 NCBI chr 8:67,622,592...67,713,922
Ensembl chr 8:67,622,708...67,714,404 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18791178) Ensembl
MGI		 PMID:18791178 GO_REF:0000107 NCBI chr37:16,123,788...16,126,634
Ensembl chr37:16,123,798...16,125,567 		JBrowse link
G KLF4 KLF transcription factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17060454) Ensembl
MGI		 PMID:17060454 GO_REF:0000107 NCBI chr11:62,881,840...62,886,676
Ensembl chr11:62,882,767...62,928,251 		JBrowse link
G LOC111093530 keratin-associated protein 6-2-like acts_upstream_of_or_within ISO (PMID:17151017) MGI PMID:17151017 NCBI chr31:25,744,080...25,745,146 JBrowse link
G MUC4 mucin 4, cell surface associated ISO RGD PMID:11120573 RGD:2303744 NCBI chr33:29,061,372...29,084,938
Ensembl chr33:29,063,096...29,111,802 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10229225) Ensembl
MGI		 PMID:10229225 GO_REF:0000107 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965 		JBrowse link
post-embryonic camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAK1 BCL2 antagonist/killer 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15955981) Ensembl
MGI		 PMID:15955981 GO_REF:0000107 NCBI chr12:2,950,359...2,957,604
Ensembl chr12:2,948,364...2,957,018 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15955981) Ensembl
MGI		 PMID:15955981 GO_REF:0000107 NCBI chr 1:107,423,388...107,426,464
Ensembl chr 1:107,422,424...107,426,464 		JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (PMID:22426483) MGI PMID:22426483 NCBI chr25:11,231,958...11,410,379
Ensembl chr25:11,231,737...11,407,621 		JBrowse link
G HMGN1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO (PMID:16466397) MGI PMID:16466397 NCBI chr31:34,275,400...34,283,373
Ensembl chr31:34,275,839...34,282,340 		JBrowse link
G KDR kinase insert domain receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22426483) Ensembl
MGI		 PMID:22426483 GO_REF:0000107 NCBI chr13:47,442,861...47,484,574
Ensembl chr13:47,442,764...47,485,042 		JBrowse link
G MIR23A microRNA mir-23a acts_upstream_of_or_within ISO (PMID:24101522) MGI PMID:24101522 NCBI chr20:48,620,335...48,620,386
Ensembl chr20:48,620,323...48,620,397 		JBrowse link
post-embryonic retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRB1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15316081), (PMID:16885194) Ensembl
MGI		 PMID:15316081 PMID:16885194 GO_REF:0000107 NCBI chr 7:5,277,394...5,490,542
Ensembl chr 7:5,277,394...5,490,470 		JBrowse link
G DSCAM DS cell adhesion molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18216855) Ensembl
MGI		 PMID:18216855 GO_REF:0000107 NCBI chr31:34,666,300...35,277,651
Ensembl chr31:34,669,424...35,400,160 		JBrowse link
G GRK1 G protein-coupled receptor kinase 1 acts_upstream_of_or_within ISO (PMID:10097103) MGI PMID:10097103 NCBI chr22:60,911,953...60,929,330
Ensembl chr22:60,911,953...60,926,146 		JBrowse link
regulation of lens fiber cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN1B cyclin dependent kinase inhibitor 1B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9784491) Ensembl
MGI		 PMID:9784491 GO_REF:0000107 NCBI chr27:33,609,154...33,613,558
Ensembl chr27:33,611,760...33,612,906 		JBrowse link
G CDKN1C cyclin dependent kinase inhibitor 1C acts_upstream_of_or_within ISO (PMID:9784491) MGI PMID:9784491 NCBI chr18:46,860,636...46,861,697 JBrowse link
regulation of neural retina development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL4 delta like canonical Notch ligand 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,059,463...8,068,742
Ensembl chr30:8,059,512...8,067,940 		JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:10,069,594...10,071,360
Ensembl chr 2:10,069,581...10,071,336 		JBrowse link
G SIX3 SIX homeobox 3 involved_in ISO (PMID:20890044) UniProt PMID:20890044 NCBI chr10:47,332,875...47,369,359
Ensembl chr10:47,332,888...47,343,635 		JBrowse link
regulation of retina development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELF4 CUGBP Elav-like family member 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23932931) MGI
Ensembl		 PMID:23932931 GO_REF:0000107 NCBI chr 7:52,940,941...53,012,206
Ensembl chr 7:52,838,558...53,010,041 		JBrowse link
retina development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACHE acetylcholinesterase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15579149) Ensembl
MGI		 PMID:15579149 GO_REF:0000107 NCBI chr 6:8,874,747...8,879,926
Ensembl chr 6:8,873,584...8,879,702 		JBrowse link
G ACTB actin beta ISO RGD PMID:22916200 RGD:9587758 NCBI chr 6:12,421,006...12,424,449
Ensembl chr 6:12,418,932...12,462,845 		JBrowse link
G AGTPBP1 ATP/GTP binding carboxypeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:73,853,491...74,030,075
Ensembl chr 1:73,887,934...74,107,312 		JBrowse link
G AHI1 Abelson helper integration site 1 acts_upstream_of_or_within ISO (PMID:20592197) MGI PMID:20592197 NCBI chr 1:27,966,101...28,199,163
Ensembl chr 1:27,998,874...28,198,351 		JBrowse link
G ALMS1 ALMS1 centrosome and basal body associated protein acts_upstream_of_or_within ISO (PMID:31302159) MGI PMID:31302159 NCBI chr17:49,301,397...49,513,729
Ensembl chr17:49,301,606...49,513,625 		JBrowse link
G APC APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (PMID:10982921) MGI PMID:10982921 NCBI chr 3:252,052...380,506
Ensembl chr 3:253,081...322,993 		JBrowse link
G ARSG arylsulfatase G acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:26975023) MGI
Ensembl		 PMID:26975023 GO_REF:0000107 NCBI chr 9:15,048,563...15,115,095
Ensembl chr 9:15,048,588...15,115,101 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9699561) Ensembl
MGI		 PMID:9699561 GO_REF:0000107 NCBI chr 1:107,423,388...107,426,464
Ensembl chr 1:107,422,424...107,426,464 		JBrowse link
G BBS1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31302159) MGI
Ensembl		 PMID:31302159 GO_REF:0000107 NCBI chr18:50,816,126...50,835,354 JBrowse link
G BBS10 Bardet-Biedl syndrome 10 involved_in IEA Ensembl GO_REF:0000107
G BMP4 bone morphogenetic protein 4 ISO RGD PMID:17069773 RGD:2289001 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557 		JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12654290) Ensembl
MGI		 PMID:12654290 GO_REF:0000107 NCBI chr32:17,761,555...17,978,056
Ensembl chr32:17,870,904...18,016,444 		JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 ISO RGD PMID:10482474 RGD:5129487 NCBI chr37:11,342,292...11,540,199
Ensembl chr37:11,342,384...11,533,024 		JBrowse link
G C3 complement C3 acts_upstream_of_or_within ISO (PMID:28057640) MGI PMID:28057640 NCBI chr20:53,566,226...53,598,365
Ensembl chr20:53,566,261...53,598,761 		JBrowse link
G CACNA1F calcium voltage-gated channel subunit alpha1 F acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chr  X:42,302,971...42,327,787
Ensembl chr  X:42,303,158...42,326,774 		JBrowse link
G CALB1 calbindin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:35,551,836...35,572,985
Ensembl chr29:35,552,436...35,572,925 		JBrowse link
G CEP290 centrosomal protein 290 acts_upstream_of_or_within ISO (PMID:21052544), (PMID:31302159) MGI PMID:21052544 PMID:31302159 NCBI chr15:29,194,449...29,281,351
Ensembl chr15:29,194,983...29,280,429 		JBrowse link
G CFD complement factor D acts_upstream_of_or_within ISO (PMID:28057640) MGI PMID:28057640 NCBI chr20:57,785,297...57,787,773
Ensembl chr20:57,657,154...57,787,713 		JBrowse link
G CFH complement factor H acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect		 ISO (PMID:17921253), (PMID:28057640)
(PMID:28057640)
(PMID:30705315)		 MGI PMID:17921253 PMID:28057640 PMID:30705315 NCBI chr38:2,878,677...2,956,226 JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:11,115,865...11,284,713
Ensembl chr29:11,156,340...11,283,627 		JBrowse link
G CLCN2 chloride voltage-gated channel 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr34:17,224,136...17,238,755
Ensembl chr34:17,223,215...17,239,621 		JBrowse link
G CLN8 CLN8 transmembrane ER and ERGIC protein acts_upstream_of_or_within ISO (PMID:15565184)
(PMID:21052544)		 MGI PMID:15565184 PMID:21052544 NCBI chr37:30,863,098...30,885,831
Ensembl chr37:30,867,479...30,884,895 		JBrowse link
G CNGA3 cyclic nucleotide gated channel subunit alpha 3 acts_upstream_of_or_within ISO (PMID:21124780) MGI PMID:21124780 NCBI chr10:44,232,716...44,278,555
Ensembl chr10:44,234,004...44,260,746 		JBrowse link
G CRB1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22447858), (PMID:25147295) Ensembl
MGI		 PMID:22447858 PMID:25147295 GO_REF:0000107 NCBI chr 7:5,277,394...5,490,542
Ensembl chr 7:5,277,394...5,490,470 		JBrowse link
G CRX cone-rod homeobox acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chr 1:108,249,911...108,261,015
Ensembl chr 1:108,249,911...108,261,010 		JBrowse link
G DCLK1 doublecortin like kinase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr25:4,441,945...4,783,542
Ensembl chr25:4,345,771...4,778,047 		JBrowse link
G DCX doublecortin involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:84,408,762...84,541,157
Ensembl chr  X:84,408,895...84,517,827 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (PMID:19389377) UniProt PMID:19389377 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348 		JBrowse link
G DRAM2 DNA damage regulated autophagy modulator 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:37691820) MGI
Ensembl		 PMID:37691820 GO_REF:0000107 NCBI chr 6:40,878,094...40,898,883
Ensembl chr 6:40,877,746...40,898,843 		JBrowse link
G DRD4 dopamine receptor D4 ISO RGD PMID:18778704 RGD:7175073
G DTNBP1 dystrobrevin binding protein 1 ISO RGD PMID:23954924 RGD:11251759 NCBI chr35:14,738,025...14,862,609
Ensembl chr35:14,738,029...14,864,169 		JBrowse link
G ELP6 elongator acetyltransferase complex subunit 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27715390) MGI
Ensembl		 PMID:27715390 GO_REF:0000107 NCBI chr20:41,400,267...41,410,138
Ensembl chr20:41,400,336...41,409,632 		JBrowse link
G GDNF glial cell derived neurotrophic factor ISO RGD PMID:16650834 RGD:2324945 NCBI chr 4:70,966,694...70,991,860
Ensembl chr 4:70,971,432...70,989,714 		JBrowse link
G GNAT1 G protein subunit alpha transducin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21124780)
(PMID:21052544)		 MGI
Ensembl		 PMID:21052544 PMID:21124780 GO_REF:0000107 NCBI chr20:39,128,244...39,133,280
Ensembl chr20:39,128,244...39,133,280 		JBrowse link
G GNB1 G protein subunit beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 5:56,777,854...56,879,619
Ensembl chr 5:56,779,354...56,817,295 		JBrowse link
G GRM6 glutamate metabotropic receptor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr11:2,577,988...2,598,893
Ensembl chr11:2,577,988...2,597,575 		JBrowse link
G GRN granulin precursor acts_upstream_of_or_within ISO (PMID:28728022) MGI PMID:28728022 NCBI chr 9:19,077,430...19,085,443
Ensembl chr 9:19,077,427...19,082,268 		JBrowse link
G HPCA hippocalcin ISO RGD PMID:7789406 RGD:9686441 NCBI chr 2:68,464,631...68,473,661
Ensembl chr 2:68,465,280...68,473,310 		JBrowse link
G HPS1 HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chr28:11,547,457...11,572,248
Ensembl chr28:11,547,741...11,571,613 		JBrowse link
G IL4 interleukin 4 ISO RGD PMID:23070471 RGD:7829830 NCBI chr11:20,972,693...20,981,539
Ensembl chr11:20,972,690...20,981,534 		JBrowse link
G IMPDH1 inosine monophosphate dehydrogenase 1 ISO RGD PMID:18295529 RGD:5144133 NCBI chr14:8,001,575...8,013,181
Ensembl chr14:7,996,717...8,012,467 		JBrowse link
G IMPDH2 inosine monophosphate dehydrogenase 2 ISO RGD PMID:18295529 RGD:5144133 NCBI chr20:40,136,106...40,140,983
Ensembl chr20:40,136,154...40,140,972 		JBrowse link
G JMJD6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15345036) Ensembl
MGI		 PMID:15345036 GO_REF:0000107 NCBI chr 9:4,037,307...4,076,119
Ensembl chr 9:4,037,439...4,076,123 		JBrowse link
G LAMA1 laminin subunit alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 7:73,309,383...73,438,543
Ensembl chr 7:73,309,388...73,448,151 		JBrowse link
G LAMB2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19907020) Ensembl
MGI		 PMID:19907020 GO_REF:0000107 NCBI chr20:40,036,967...40,062,628
Ensembl chr20:40,050,157...40,062,523 		JBrowse link
G LAMC3 laminin subunit gamma 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19907020) Ensembl
MGI		 PMID:19907020 GO_REF:0000107 NCBI chr 9:52,970,313...53,028,817
Ensembl chr 9:52,970,306...53,028,821 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:16111892) MGI PMID:16111892 NCBI chr10:29,875,381...30,396,934
Ensembl chr10:29,919,521...30,395,787 		JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164 		JBrowse link
G LHX2 LIM homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19146846) Ensembl
MGI		 PMID:19146846 GO_REF:0000107 NCBI chr 9:58,825,505...58,859,311
Ensembl chr 9:58,825,492...58,845,883 		JBrowse link
G LIF LIF interleukin 6 family cytokine ISO RGD PMID:16643897 RGD:2326157 NCBI chr26:23,400,226...23,418,538
Ensembl chr26:23,403,364...23,406,851 		JBrowse link
G LOC100688777 Bardet-Biedl syndrome 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31302159), (PMID:36125046), (PMID:36700052) MGI
Ensembl		 PMID:31302159 PMID:36125046 PMID:36700052 GO_REF:0000107 NCBI chr15:19,302,988...19,334,763
Ensembl chr15:19,331,876...19,335,583 		JBrowse link
G LPCAT1 lysophosphatidylcholine acyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr34:11,162,715...11,195,380
Ensembl chr34:11,164,615...11,193,681 		JBrowse link
G MAX MYC associated factor X ISO RGD PMID:14603520 RGD:2316820 NCBI chr 8:39,441,216...39,465,703
Ensembl chr 8:39,380,686...39,465,959 		JBrowse link
G MDM1 Mdm1 nuclear protein acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:21052544) MGI
GO_Central		 PMID:21052544 GO_REF:0000033 NCBI chr10:10,523,656...10,552,824
Ensembl chr10:10,524,328...10,696,181 		JBrowse link
G MERTK MER proto-oncogene, tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr17:36,336,787...36,445,796
Ensembl chr17:36,336,861...36,445,380 		JBrowse link
G MFRP membrane frizzled-related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 5:14,555,619...14,561,577
Ensembl chr 5:14,556,065...14,561,623 		JBrowse link
G MFSD8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27654426) MGI
Ensembl		 PMID:27654426 GO_REF:0000107 NCBI chr19:12,905,336...13,030,901
Ensembl chr19:12,982,394...13,020,083 		JBrowse link
G MIR183 microRNA mir-183 acts_upstream_of_or_within ISO (PMID:28819115)
(PMID:23341629)		 MGI PMID:23341629 PMID:28819115 NCBI chr14:7,068,542...7,068,603
Ensembl chr14:7,068,519...7,068,625 		JBrowse link
G MIR96 microRNA mir-96 acts_upstream_of_or_within ISO (PMID:23341629)
(PMID:28819115)		 MGI PMID:23341629 PMID:28819115 NCBI chr14:7,068,754...7,068,842
Ensembl chr14:7,068,754...7,068,842 		JBrowse link
G MUSK muscle associated receptor tyrosine kinase ISO RGD PMID:16899069 RGD:2317091 NCBI chr11:65,552,320...65,642,165
Ensembl chr11:65,551,889...65,642,349 		JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:11283949), (PMID:9356462) MGI PMID:9356462 PMID:11283949 NCBI chr 5:33,239,800...33,360,459
Ensembl chr 5:33,241,266...33,360,934 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26607664) Ensembl
MGI		 PMID:26607664 GO_REF:0000107 NCBI chr 9:20,407,296...20,414,094
Ensembl chr 9:20,407,281...20,414,056 		JBrowse link
G NDP norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO (PMID:9071226) MGI PMID:9071226 NCBI chr  X:37,949,560...37,975,573
Ensembl chr  X:37,950,489...37,975,346 		JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728677) Ensembl
MGI		 PMID:15728677 GO_REF:0000107 NCBI chr 5:14,228,197...14,292,825
Ensembl chr 5:14,228,197...14,315,060 		JBrowse link
G NEUROD4 neuronal differentiation 4 ISO RGD PMID:15345241 RGD:2311603 NCBI chr27:384,809...396,731
Ensembl chr27:389,095...390,090 		JBrowse link
G NFIA nuclear factor I A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31128945) Ensembl
MGI		 PMID:31128945 GO_REF:0000107 NCBI chr 5:48,489,521...49,064,867
Ensembl chr 5:48,496,773...49,064,848 		JBrowse link
G NFIB nuclear factor I B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31128945) Ensembl
MGI		 PMID:31128945 GO_REF:0000107 NCBI chr11:34,573,136...35,010,319
Ensembl chr11:34,579,431...34,901,322 		JBrowse link
G NFIX nuclear factor I X acts_upstream_of_or_within ISO (PMID:31128945) MGI PMID:31128945 NCBI chr20:49,117,087...49,187,023
Ensembl chr20:49,117,943...49,214,788 		JBrowse link
G NOS3 nitric oxide synthase 3 ISO RGD PMID:16639026 RGD:7771562 NCBI chr16:15,054,196...15,072,454
Ensembl chr16:15,011,344...15,072,277 		JBrowse link
G NPHP1 nephrocystin 1 involved_in ISO (PMID:19208653) UniProt PMID:19208653 NCBI chr17:35,076,527...35,136,674
Ensembl chr17:35,076,636...35,136,425 		JBrowse link
G NPHP4 nephrocystin 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 5:59,819,236...59,936,220
Ensembl chr 5:59,814,274...59,929,386 		JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11997145)
(PMID:16702404)		 Ensembl
MGI		 PMID:11997145 PMID:16702404 GO_REF:0000107 NCBI chr12:65,209,177...65,230,274
Ensembl chr12:65,209,542...65,228,998 		JBrowse link
G NR2E3 nuclear receptor subfamily 2 group E member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544)
(PMID:12407160)		 Ensembl
MGI		 PMID:12407160 PMID:21052544 GO_REF:0000107 NCBI chr30:35,375,181...35,382,398 JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 ISO RGD PMID:22714110 RGD:124713571 NCBI chr36:2,546,237...2,554,559
Ensembl chr36:2,547,421...2,552,780 		JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25542970) Ensembl
MGI		 PMID:25542970 GO_REF:0000107 NCBI chr 1:74,447,927...74,777,910
Ensembl chr 1:74,449,060...74,777,032 		JBrowse link
G OPA1 OPA1 mitochondrial dynamin like GTPase ISO RGD PMID:15505078 RGD:1547836 NCBI chr23:52,068,123...52,154,410
Ensembl chr23:52,068,118...52,151,593 		JBrowse link
G OPN4 opsin 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21124780) Ensembl
MGI		 PMID:21124780 GO_REF:0000107 NCBI chr 4:34,350,058...34,365,410
Ensembl chr 4:34,355,128...34,365,215 		JBrowse link
G PAX4 paired box 4 involved_in ISO
IBA		 RGD
GO_Central		 PMID:19012751 GO_REF:0000033 RGD:2311636 NCBI chr14:8,714,251...8,719,387
Ensembl chr14:8,714,949...8,719,371 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:19146846) RGD
GO_Central
MGI
Ensembl		 PMID:19012751 PMID:19146846 GO_REF:0000033 GO_REF:0000107 RGD:2311636
G PDE6A phosphodiesterase 6A involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:21052544) GO_Central
MGI		 PMID:21052544 GO_REF:0000033 NCBI chr 4:59,103,965...59,163,857
Ensembl chr 4:59,103,945...59,163,857 		JBrowse link
G PDE6B phosphodiesterase 6B involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:21052544) Ensembl
MGI
GO_Central		 PMID:21052544 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:91,746,571...91,775,372
Ensembl chr 3:91,746,571...91,775,372 		JBrowse link
G PDGFB platelet derived growth factor subunit B acts_upstream_of_or_within ISO (PMID:25224828) MGI PMID:25224828 NCBI chr10:25,798,877...25,819,422
Ensembl chr10:25,798,938...25,817,746 		JBrowse link
G PFDN5 prefoldin subunit 5 acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chr27:1,906,133...1,909,613
Ensembl chr27:1,906,133...1,909,613 		JBrowse link
G POU4F2 POU class 4 homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8637595)
(PMID:9630743)		 Ensembl
MGI		 PMID:8637595 PMID:9630743 GO_REF:0000107 NCBI chr15:45,030,818...45,034,446
Ensembl chr15:45,031,094...45,032,784 		JBrowse link
G PRPH2 peripherin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28053051)
(PMID:15964665)
(PMID:21052544)		 Ensembl
MGI		 PMID:15964665 PMID:21052544 PMID:28053051 GO_REF:0000107 NCBI chr12:11,299,236...11,316,175
Ensembl chr12:11,299,236...11,316,175 		JBrowse link
G PTN pleiotrophin ISO RGD PMID:8453763 PMID:16914133 RGD:9831439 RGD:9831456 NCBI chr16:11,283,078...11,382,820
Ensembl chr16:11,283,077...11,382,814 		JBrowse link
G RBP4 retinol binding protein 4 acts_upstream_of_or_within ISO (PMID:11562477) MGI PMID:11562477 NCBI chr28:7,822,936...7,830,735
Ensembl chr28:7,822,944...7,830,750 		JBrowse link
G RD3 RD3 regulator of GUCY2D involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:21052544) Ensembl
GO_Central
MGI		 PMID:21052544 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:9,876,003...9,887,267 JBrowse link
G RET ret proto-oncogene ISO RGD PMID:16650834 RGD:2324945 NCBI chr28:3,946,132...3,995,505
Ensembl chr28:3,947,232...3,994,210 		JBrowse link
G RHO rhodopsin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr20:5,630,735...5,638,906 JBrowse link
G RNPEP arginyl aminopeptidase ISO RGD PMID:15500823 RGD:2325937 NCBI chr 7:966,563...985,169
Ensembl chr 7:966,607...984,714 		JBrowse link
G ROM1 retinal outer segment membrane protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28053051) Ensembl
MGI		 PMID:28053051 GO_REF:0000107 NCBI chr18:54,025,603...54,027,803
Ensembl chr18:54,025,606...54,027,375 		JBrowse link
G RORB RAR related orphan receptor B involved_in ISO (PMID:23652001) UniProt PMID:23652001 NCBI chr 1:83,470,569...83,666,200
Ensembl chr 1:83,476,816...83,666,061 		JBrowse link
G RP1 RP1 axonemal microtubule associated involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:21052544) Ensembl
MGI
GO_Central		 PMID:21052544 GO_REF:0000033 GO_REF:0000107 NCBI chr29:6,079,519...6,136,009
Ensembl chr29:6,079,377...6,136,009 		JBrowse link
G RP1L1 RP1 like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr25:27,317,102...27,332,075
Ensembl chr25:27,325,658...27,330,556 		JBrowse link
G RPGRIP1 RPGR interacting protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr15:18,316,887...18,388,724
Ensembl chr15:18,316,887...18,387,735 		JBrowse link
G RPL24 ribosomal protein L24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10049578), (PMID:9331275) Ensembl
MGI		 PMID:9331275 PMID:10049578 GO_REF:0000107 NCBI chr33:8,018,183...8,023,779
Ensembl chr33:8,018,190...8,073,124 		JBrowse link
G RRM1 ribonucleotide reductase catalytic subunit M1 ISO RGD PMID:2647502 RGD:5133699 NCBI chr21:26,595,838...26,631,476
Ensembl chr21:26,595,914...26,631,135 		JBrowse link
G SCAPER S-phase cyclin A associated protein in the ER acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:28794130) MGI
Ensembl		 PMID:28794130 GO_REF:0000107 NCBI chr30:39,380,315...39,812,030
Ensembl chr30:39,388,192...39,812,046 		JBrowse link
G SERPINF1 serpin family F member 1 ISO RGD PMID:21738387 RGD:8655555 NCBI chr 9:45,891,368...45,902,768
Ensembl chr 9:45,891,410...45,902,765 		JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (PMID:17003410) MGI PMID:17003410 NCBI chr 5:57,144,178...57,216,385
Ensembl chr 5:57,145,825...57,214,403 		JBrowse link
G SLC1A1 solute carrier family 1 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:92,898,274...92,978,260
Ensembl chr 1:92,898,274...92,978,260 		JBrowse link
G SLC38A8 solute carrier family 38 member 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:37862028) MGI
Ensembl		 PMID:37862028 GO_REF:0000107 NCBI chr 5:68,289,864...68,308,381
Ensembl chr 5:68,289,485...68,308,340 		JBrowse link
G SLC4A5 solute carrier family 4 member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21705333) Ensembl
MGI		 PMID:21705333 GO_REF:0000107 NCBI chr17:48,769,963...48,882,201
Ensembl chr17:48,797,807...48,880,441 		JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19490914) Ensembl
MGI		 PMID:19490914 GO_REF:0000107 NCBI chr 6:39,667,941...39,672,716
Ensembl chr 6:39,668,232...39,672,638 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:19490914) UniProt
MGI
Ensembl		 PMID:19490914 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172 		JBrowse link
G TBC1D32 TBC1 domain family member 32 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20159594) Ensembl
MGI		 PMID:20159594 GO_REF:0000107 NCBI chr 1:60,662,704...60,873,881
Ensembl chr 1:60,667,721...60,873,614 		JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20711468) Ensembl
MGI		 PMID:20711468 GO_REF:0000107 NCBI chr18:49,784,480...49,794,361
Ensembl chr18:49,784,490...49,794,317 		JBrowse link
G TENT2 terminal nucleotidyltransferase 2 ISO RGD PMID:23700402 RGD:11041783 NCBI chr 3:27,273,188...27,335,897
Ensembl chr 3:27,274,519...27,335,783 		JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (PMID:18973577) MGI PMID:18973577 NCBI chr 7:70,040,376...70,048,346
Ensembl chr 7:70,040,508...70,047,912 		JBrowse link
G TGIF2 TGFB induced factor homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18926818) Ensembl
MGI		 PMID:18926818 GO_REF:0000107 NCBI chr24:25,360,363...25,375,531
Ensembl chr24:25,364,357...25,373,302 		JBrowse link
G TTLL5 tubulin tyrosine ligase like 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24791901) MGI
Ensembl		 PMID:24791901 GO_REF:0000107 NCBI chr 8:48,651,766...48,920,733
Ensembl chr 8:48,651,814...48,920,039 		JBrowse link
G TUB TUB bipartite transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr21:31,566,095...31,629,545
Ensembl chr21:31,566,130...31,625,101 		JBrowse link
G TULP1 TUB like protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr12:4,632,580...4,644,313
Ensembl chr12:4,633,098...4,645,994 		JBrowse link
G UCHL3 ubiquitin C-terminal hydrolase L3 acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chr22:29,348,962...29,397,944
Ensembl chr22:29,348,706...29,407,965 		JBrowse link
G USH2A usherin ISO RGD PMID:12160733 RGD:634438 NCBI chr38:11,063,221...11,750,444
Ensembl chr38:11,063,817...11,750,444 		JBrowse link
G VAX2 ventral anterior homeobox 2 acts_upstream_of_or_within ISO (PMID:10595508) MGI PMID:10595508 NCBI chr10:69,252,926...69,262,225 JBrowse link
G XRN2 5'-3' exoribonuclease 2 ISO RGD PMID:23700402 RGD:11041783 NCBI chr24:2,042,521...2,128,942
Ensembl chr24:2,042,888...2,128,867 		JBrowse link
G ZNF513 zinc finger protein 513 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:21,332,279...21,335,954
Ensembl chr17:21,332,621...21,335,577 		JBrowse link
retina layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL6 ADP ribosylation factor like GTPase 6 acts_upstream_of_or_within ISO (PMID:22139371)
(PMID:20333246)		 MGI PMID:20333246 PMID:22139371 NCBI chr33:4,797,944...4,857,566
Ensembl chr33:4,800,917...4,839,635 		JBrowse link
G CALB1 calbindin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:35,551,836...35,572,985
Ensembl chr29:35,552,436...35,572,925 		JBrowse link
G CRB1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17234588) Ensembl
MGI		 PMID:17234588 GO_REF:0000107 NCBI chr 7:5,277,394...5,490,542
Ensembl chr 7:5,277,394...5,490,470 		JBrowse link
G FAT3 FAT atypical cadherin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21903076) Ensembl
MGI		 PMID:21903076 GO_REF:0000107 NCBI chr21:7,711,304...8,355,609
Ensembl chr21:7,711,995...8,213,266 		JBrowse link
G FJX1 four-jointed box kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21903076) Ensembl
MGI		 PMID:21903076 GO_REF:0000107 NCBI chr18:32,391,276...32,393,321 JBrowse link
G FOXN4 forkhead box N4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:17,730,638...17,757,173
Ensembl chr26:17,728,878...17,755,602 		JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:51,732,079...51,783,534
Ensembl chr17:51,732,016...51,781,063 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:9,066,957...9,256,916
Ensembl chr16:9,066,970...9,244,526 		JBrowse link
G IRX6 iroquois homeobox 6 acts_upstream_of_or_within ISO (PMID:23172916) MGI PMID:23172916 NCBI chr 2:60,630,688...60,636,285
Ensembl chr 2:60,630,447...60,636,416 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:16111892) MGI PMID:16111892 NCBI chr10:29,875,381...30,396,934
Ensembl chr10:29,919,521...30,395,787 		JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164 		JBrowse link
G MEGF11 multiple EGF like domains 11 involved_in ISO (PMID:22407321) UniProt PMID:22407321 NCBI chr30:30,224,538...30,561,565
Ensembl chr30:30,227,160...30,561,562 		JBrowse link
G MIR145 microRNA mir-145 ISO RGD PMID:34291866 RGD:155260301 NCBI chr 4:59,533,128...59,533,210
Ensembl chr 4:59,533,128...59,533,210 		JBrowse link
G NDP norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO (PMID:29654250) MGI PMID:29654250 NCBI chr  X:37,949,560...37,975,573
Ensembl chr  X:37,950,489...37,975,346 		JBrowse link
G PROM1 prominin 1 involved_in ISO (PMID:19228982) UniProt PMID:19228982 NCBI chr 3:64,229,487...64,362,346
Ensembl chr 3:64,260,685...64,382,009 		JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:10,069,594...10,071,360
Ensembl chr 2:10,069,581...10,071,336 		JBrowse link
G PTPRM protein tyrosine phosphatase receptor type M involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:74,005,682...74,597,498
Ensembl chr 7:73,815,186...74,609,116 		JBrowse link
G RDH13 retinol dehydrogenase 13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22605914) Ensembl
MGI		 PMID:22605914 GO_REF:0000107 NCBI chr 1:102,539,363...102,552,749
Ensembl chr 1:102,539,124...102,554,027 		JBrowse link
G RS1 retinoschisin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11983912)
(PMID:15326152)		 Ensembl
MGI		 PMID:11983912 PMID:15326152 GO_REF:0000107 NCBI chr  X:14,727,016...14,749,674
Ensembl chr  X:14,727,062...14,749,492 		JBrowse link
G SDK2 sidekick cell adhesion molecule 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:6,788,305...6,868,052
Ensembl chr 9:6,734,504...6,867,078 		JBrowse link
G SLC1A1 solute carrier family 1 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19766171) Ensembl
MGI		 PMID:19766171 GO_REF:0000107 NCBI chr 1:92,898,274...92,978,260
Ensembl chr 1:92,898,274...92,978,260 		JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISO (PMID:20607706) UniProt PMID:20607706 NCBI chr35:10,157,043...10,180,484
Ensembl chr35:10,157,882...10,180,270 		JBrowse link
G TFAP2B transcription factor AP-2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:18,544,176...18,574,300
Ensembl chr12:18,544,446...18,572,902 		JBrowse link
G TSPAN12 tetraspanin 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:58,941,658...59,005,507
Ensembl chr14:58,941,551...59,005,463 		JBrowse link
retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:17092954) MGI PMID:17092954
G CRB1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17234588), (PMID:25147295) Ensembl
MGI		 PMID:17234588 PMID:25147295 GO_REF:0000107 NCBI chr 7:5,277,394...5,490,542
Ensembl chr 7:5,277,394...5,490,470 		JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in ISO (PMID:19389377) UniProt PMID:19389377 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348 		JBrowse link
G IMPG2 interphotoreceptor matrix proteoglycan 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32265257) Ensembl
MGI		 PMID:32265257 GO_REF:0000107 NCBI chr33:7,706,069...7,785,817
Ensembl chr33:7,709,683...7,785,309 		JBrowse link
G LRP5 LDL receptor related protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:49,439,494...49,555,375
Ensembl chr18:49,439,483...49,516,396 		JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:18985738) MGI PMID:18985738 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437 		JBrowse link
G MAN2A1 mannosidase alpha class 2A member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20144606) Ensembl
MGI		 PMID:20144606 GO_REF:0000107 NCBI chr 3:2,340,392...2,477,458
Ensembl chr 3:2,330,959...2,488,393 		JBrowse link
G MFSD2A MFSD2 lysolipid transporter A, lysophospholipid involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27008858) Ensembl
ARUK-UCL		 PMID:27008858 GO_REF:0000107 NCBI chr15:2,966,433...2,979,030
Ensembl chr15:2,966,461...2,978,968 		JBrowse link
G NDP norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO (PMID:15716406) MGI PMID:15716406 NCBI chr  X:37,949,560...37,975,573
Ensembl chr  X:37,950,489...37,975,346 		JBrowse link
G NECTIN3 nectin cell adhesion molecule 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728677) Ensembl
MGI		 PMID:15728677 GO_REF:0000107 NCBI chr33:15,868,813...16,173,158
Ensembl chr33:15,911,411...15,933,307 		JBrowse link
G NECTIN3 nectin cell adhesion molecule 3 involved_in IEA Ensembl GO_REF:0000107
G PROM1 prominin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:64,229,487...64,362,346
Ensembl chr 3:64,260,685...64,382,009 		JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17301087) Ensembl
MGI		 PMID:17301087 GO_REF:0000107 NCBI chr 2:10,069,594...10,071,360
Ensembl chr 2:10,069,581...10,071,336 		JBrowse link
G ROM1 retinal outer segment membrane protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20300562) Ensembl
MGI		 PMID:20300562 GO_REF:0000107 NCBI chr18:54,025,603...54,027,803
Ensembl chr18:54,025,606...54,027,375 		JBrowse link
G RP1 RP1 axonemal microtubule associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr29:6,079,519...6,136,009
Ensembl chr29:6,079,377...6,136,009 		JBrowse link
G RPGR retinitis pigmentosa GTPase regulator acts_upstream_of_or_within ISO (PMID:10725384) MGI PMID:10725384 NCBI chr  X:33,056,371...33,105,036
Ensembl chr  X:32,745,020...33,330,841 		JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:16651659) MGI PMID:16651659 NCBI chr34:14,853,000...14,855,153 JBrowse link
G VSX2 visual system homeobox 2 acts_upstream_of_or_within ISO (PMID:16854970), (PMID:8630490) MGI PMID:8630490 PMID:16854970 NCBI chr 8:47,455,337...47,473,786
Ensembl chr 8:47,455,340...47,473,684 		JBrowse link
retina vasculature development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR2B activin A receptor type 2B involved_in ISO (PMID:19903896) BHF-UCL PMID:19903896 NCBI chr23:8,211,555...8,225,596
Ensembl chr23:8,192,483...8,218,894 		JBrowse link
G ACVRL1 activin A receptor like type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:3,075,373...3,090,549
Ensembl chr27:3,076,124...3,092,469 		JBrowse link
G B9D2 B9 domain containing 2 acts_upstream_of_or_within ISO (PMID:29715368) MGI PMID:29715368 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:11,342,292...11,540,199
Ensembl chr37:11,342,384...11,533,024 		JBrowse link
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19005183) Ensembl
MGI		 PMID:19005183 GO_REF:0000107 NCBI chr17:30,273,281...30,278,554
Ensembl chr17:30,272,749...30,278,554 		JBrowse link
G FZD4 frizzled class receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25083995), (PMID:25414188)
(PMID:23217714)		 Ensembl
MGI		 PMID:23217714 PMID:25083995 PMID:25414188 GO_REF:0000107 NCBI chr21:12,699,886...12,709,132
Ensembl chr21:12,699,774...12,724,923 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21212189) Ensembl
MGI		 PMID:21212189 GO_REF:0000107 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692 		JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:16111892) MGI PMID:16111892 NCBI chr10:29,875,381...30,396,934
Ensembl chr10:29,919,521...30,395,787 		JBrowse link
G LRP5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25083995)
(PMID:22272305)		 Ensembl
MGI		 PMID:22272305 PMID:25083995 GO_REF:0000107 NCBI chr18:49,439,494...49,555,375
Ensembl chr18:49,439,483...49,516,396 		JBrowse link
G MIR218-1 microRNA mir-218-1 acts_upstream_of_or_within ISO (PMID:20947829) MGI PMID:20947829 NCBI chr 3:89,044,709...89,044,772
Ensembl chr 3:89,044,699...89,044,782 		JBrowse link
G MIR218-2 microRNA mir-218-2 acts_upstream_of_or_within ISO (PMID:20947829) MGI PMID:20947829 NCBI chr 4:43,010,775...43,010,838
Ensembl chr 4:43,010,751...43,010,860 		JBrowse link
G MIR23A microRNA mir-23a acts_upstream_of_or_within ISO (PMID:21536891) MGI PMID:21536891 NCBI chr20:48,620,335...48,620,386
Ensembl chr20:48,620,323...48,620,397 		JBrowse link
G MIR23B microRNA mir-23b acts_upstream_of_or_within ISO (PMID:21536891) MGI PMID:21536891 NCBI chr 1:71,678,353...71,678,406
Ensembl chr 1:71,678,346...71,678,416 		JBrowse link
G MIR24-1 microRNA mir-24-1 acts_upstream_of_or_within ISO (PMID:21536891) MGI PMID:21536891 NCBI chr 1:71,677,608...71,677,669
Ensembl chr 1:71,677,608...71,677,669 		JBrowse link
G MIR24-2 microRNA mir-24-2 acts_upstream_of_or_within ISO (PMID:21536891) MGI PMID:21536891 NCBI chr20:48,620,684...48,620,745
Ensembl chr20:48,620,674...48,620,745 		JBrowse link
G MIR27A microRNA mir-27a acts_upstream_of_or_within ISO (PMID:21536891) MGI PMID:21536891 NCBI chr20:48,620,556...48,620,615
Ensembl chr20:48,620,556...48,620,615 		JBrowse link
G MIR27B microRNA mir-27b acts_upstream_of_or_within ISO (PMID:21536891) MGI PMID:21536891 NCBI chr 1:71,678,117...71,678,179
Ensembl chr 1:71,678,105...71,678,191 		JBrowse link
G NDP norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO (PMID:15716406), (PMID:18978344), (PMID:28575130), (PMID:29654250)
(PMID:23217714)
(PMID:15716406), (PMID:29715368)
(PMID:25083995), (PMID:25414188)		 MGI PMID:15716406 PMID:18978344 PMID:23217714 PMID:25083995 PMID:25414188 More... NCBI chr  X:37,949,560...37,975,573
Ensembl chr  X:37,950,489...37,975,346 		JBrowse link
G NRP1 neuropilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25414188) Ensembl
MGI		 PMID:25414188 GO_REF:0000107 NCBI chr 2:3,416,062...3,553,929
Ensembl chr 2:3,413,821...3,552,483 		JBrowse link
G PDGFB platelet derived growth factor subunit B acts_upstream_of_or_within ISO (PMID:25224828) MGI PMID:25224828 NCBI chr10:25,798,877...25,819,422
Ensembl chr10:25,798,938...25,817,746 		JBrowse link
G PDGFRA platelet derived growth factor receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:46,729,722...46,775,828
Ensembl chr13:46,730,703...46,773,278 		JBrowse link
G PDGFRB platelet derived growth factor receptor beta involved_in ISS UniProt GO_REF:0000024 NCBI chr 4:58,925,922...58,963,639
Ensembl chr 4:58,926,351...58,962,283 		JBrowse link
G ROM1 retinal outer segment membrane protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20300562) Ensembl
MGI		 PMID:20300562 GO_REF:0000107 NCBI chr18:54,025,603...54,027,803
Ensembl chr18:54,025,606...54,027,375 		JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885 		JBrowse link
G VSTM4 V-set and transmembrane domain containing 4 acts_upstream_of_or_within ISO (PMID:31698979) MGI PMID:31698979 NCBI chr28:932,483...1,026,893 JBrowse link
retina vasculature morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARHGEF15 Rho guanine nucleotide exchange factor 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22535667) Ensembl
MGI		 PMID:22535667 GO_REF:0000107 NCBI chr 5:33,096,108...33,110,551
Ensembl chr 5:33,098,159...33,121,083 		JBrowse link
G CLIC4 chloride intracellular channel 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19197003) Ensembl
MGI		 PMID:19197003 GO_REF:0000107 NCBI chr 2:74,903,653...74,974,103
Ensembl chr 2:74,906,948...74,974,032 		JBrowse link
G FZD4 frizzled class receptor 4 involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 (PMID:19837032) Ensembl
GO_Central
MGI		 PMID:19837032 GO_REF:0000033 GO_REF:0000107 NCBI chr21:12,699,886...12,709,132
Ensembl chr21:12,699,774...12,724,923 		JBrowse link
G LRP5 LDL receptor related protein 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11956231)
(PMID:18263894)
(PMID:19837032)		 RGD
MGI
Ensembl		 PMID:11956231 PMID:18263894 PMID:19837032 PMID:32833527 GO_REF:0000107 RGD:40902996 NCBI chr18:49,439,494...49,555,375
Ensembl chr18:49,439,483...49,516,396 		JBrowse link
G NDP norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO (PMID:18978344)
(PMID:19837032)		 MGI PMID:18978344 PMID:19837032 NCBI chr  X:37,949,560...37,975,573
Ensembl chr  X:37,950,489...37,975,346 		JBrowse link
G NRP1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:3,416,062...3,553,929
Ensembl chr 2:3,413,821...3,552,483 		JBrowse link
G RHOJ ras homolog family member J involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22535667) Ensembl
MGI		 PMID:22535667 GO_REF:0000107 NCBI chr 8:37,803,460...37,880,411
Ensembl chr 8:37,803,717...37,882,207 		JBrowse link
G SLC4A7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO (PMID:12808454) MGI PMID:12808454 NCBI chr23:16,710,649...16,788,277
Ensembl chr23:16,710,701...16,785,541 		JBrowse link
retinal bipolar neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE22 basic helix-loop-helix family member e22 acts_upstream_of_or_within ISO (PMID:17092954) MGI PMID:17092954
G CABP4 calcium binding protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16249514) Ensembl
MGI		 PMID:16249514 GO_REF:0000107 NCBI chr18:50,014,698...50,017,854
Ensembl chr18:50,014,698...50,017,854 		JBrowse link
G CASZ1 castor zinc finger 1 acts_upstream_of_or_within ISO (PMID:24467707) MGI PMID:24467707 NCBI chr 2:85,194,640...85,218,068
Ensembl chr 2:85,176,161...85,232,920 		JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (PMID:25654255) MGI PMID:25654255 NCBI chr18:1,661,851...1,750,987
Ensembl chr18:1,661,690...1,770,768 		JBrowse link
G IRX5 iroquois homeobox 5 acts_upstream_of_or_within ISO (PMID:18322081) MGI PMID:18322081 NCBI chr 2:60,957,353...60,978,782
Ensembl chr 2:60,968,193...61,041,385 		JBrowse link
G IRX6 iroquois homeobox 6 acts_upstream_of_or_within ISO (PMID:23172916) MGI PMID:23172916 NCBI chr 2:60,630,688...60,636,285
Ensembl chr 2:60,630,447...60,636,416 		JBrowse link
G PRDM1 PR/SET domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28199486) Ensembl
MGI		 PMID:28199486 GO_REF:0000107 NCBI chr12:63,454,242...63,495,278
Ensembl chr12:63,470,974...63,495,579 		JBrowse link
G VSX1 visual system homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18322081)
(PMID:14745032)
(PMID:15043821)		 Ensembl
MGI		 PMID:14745032 PMID:15043821 PMID:18322081 GO_REF:0000107 NCBI chr23:1,268,465...1,274,854
Ensembl chr23:1,269,139...1,274,784 		JBrowse link
G VSX2 visual system homeobox 2 acts_upstream_of_or_within ISO (PMID:8630490) MGI PMID:8630490 NCBI chr 8:47,455,337...47,473,786
Ensembl chr 8:47,455,340...47,473,684 		JBrowse link
G ZHX2 zinc fingers and homeoboxes 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:21,231,985...21,393,756
Ensembl chr13:21,377,316...21,379,832 		JBrowse link
retinal blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL4A1 collagen type IV alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:58,511,210...58,651,949
Ensembl chr22:58,512,212...58,588,666 		JBrowse link
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:30,273,281...30,278,554
Ensembl chr17:30,272,749...30,278,554 		JBrowse link
G FZD4 frizzled class receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:12,699,886...12,709,132
Ensembl chr21:12,699,774...12,724,923 		JBrowse link
G LAMA1 laminin subunit alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 7:73,309,383...73,438,543
Ensembl chr 7:73,309,388...73,448,151 		JBrowse link
G LRP5 LDL receptor related protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:49,439,494...49,555,375
Ensembl chr18:49,439,483...49,516,396 		JBrowse link
G NDP norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO (PMID:18978344), (PMID:22394677), (PMID:28575130) MGI PMID:18978344 PMID:22394677 PMID:28575130 NCBI chr  X:37,949,560...37,975,573
Ensembl chr  X:37,950,489...37,975,346 		JBrowse link
retinal cone cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 involved_in ISO (PMID:20081859) CACAO PMID:20081859 NCBI chr 1:27,966,101...28,199,163
Ensembl chr 1:27,998,874...28,198,351 		JBrowse link
G CABP4 calcium binding protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16249514) Ensembl
MGI		 PMID:16249514 GO_REF:0000107 NCBI chr18:50,014,698...50,017,854
Ensembl chr18:50,014,698...50,017,854 		JBrowse link
G CNGA3 cyclic nucleotide gated channel subunit alpha 3 acts_upstream_of_or_within ISO (PMID:21052544) MGI PMID:21052544 NCBI chr10:44,232,716...44,278,555
Ensembl chr10:44,234,004...44,260,746 		JBrowse link
G CRB2 crumbs cell polarity complex component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:59,427,661...59,450,436
Ensembl chr 9:59,427,569...59,450,434 		JBrowse link
G DIO3 iodothyronine deiodinase 3 acts_upstream_of_or_within ISO (PMID:20203194) MGI PMID:20203194 NCBI chr 8:69,696,779...69,698,880 JBrowse link
G GNAT2 G protein subunit alpha transducin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17065522), (PMID:21052544) Ensembl
MGI		 PMID:17065522 PMID:21052544 GO_REF:0000107 NCBI chr 6:42,259,404...42,271,197
Ensembl chr 6:42,259,702...42,268,082 		JBrowse link
G HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr 4:64,777,069...65,162,603
Ensembl chr 4:64,775,577...65,160,444 		JBrowse link
G MIR124-1 microRNA mir-124-1 acts_upstream_of_or_within ISO (PMID:21857657) MGI PMID:21857657 NCBI chr25:28,188,264...28,188,322
Ensembl chr25:28,188,250...28,188,334 		JBrowse link
G MIR124-2 microRNA mir-124-2 acts_upstream_of_or_within ISO (PMID:21857657) MGI PMID:21857657 NCBI chr29:14,264,389...14,264,445 JBrowse link
G MIR183 microRNA mir-183 acts_upstream_of_or_within ISO (PMID:23341629) MGI PMID:23341629 NCBI chr14:7,068,542...7,068,603
Ensembl chr14:7,068,519...7,068,625 		JBrowse link
G MIR96 microRNA mir-96 acts_upstream_of_or_within ISO (PMID:23341629) MGI PMID:23341629 NCBI chr14:7,068,754...7,068,842
Ensembl chr14:7,068,754...7,068,842 		JBrowse link
G PDE6C phosphodiesterase 6C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21052544) Ensembl
MGI		 PMID:21052544 GO_REF:0000107 NCBI chr28:7,839,604...7,887,827
Ensembl chr28:7,839,847...7,887,776 		JBrowse link
G RORB RAR related orphan receptor B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:83,470,569...83,666,200
Ensembl chr 1:83,476,816...83,666,061 		JBrowse link
G RP1 RP1 axonemal microtubule associated involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr29:6,079,519...6,136,009
Ensembl chr29:6,079,377...6,136,009 		JBrowse link
G THRB thyroid hormone receptor beta involved_in
acts_upstream_of		 IEA
ISO		 (PMID:20203194) Ensembl
MGI		 PMID:20203194 GO_REF:0000107 NCBI chr23:19,278,650...19,648,547
Ensembl chr23:19,277,493...19,660,283 		JBrowse link
G THY1 Thy-1 cell surface antigen involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:14,503,902...14,509,113
Ensembl chr 5:14,503,902...14,509,113 		JBrowse link
G USH1C USH1 protein network component harmonin involved_in IBA GO_Central GO_REF:0000033 NCBI chr21:40,055,786...40,100,685
Ensembl chr21:40,055,730...40,101,430 		JBrowse link
retinal cone cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BBS10 Bardet-Biedl syndrome 10 involved_in IEA Ensembl GO_REF:0000107
G GNAT1 G protein subunit alpha transducin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19815523) MGI
Ensembl		 PMID:19815523 GO_REF:0000107 NCBI chr20:39,128,244...39,133,280
Ensembl chr20:39,128,244...39,133,280 		JBrowse link
G GNAT2 G protein subunit alpha transducin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19815523) Ensembl
MGI		 PMID:19815523 GO_REF:0000107 NCBI chr 6:42,259,404...42,271,197
Ensembl chr 6:42,259,702...42,268,082 		JBrowse link
G LOC100688777 Bardet-Biedl syndrome 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:36125046) MGI
Ensembl		 PMID:36125046 GO_REF:0000107 NCBI chr15:19,302,988...19,334,763
Ensembl chr15:19,331,876...19,335,583 		JBrowse link
G NOTCH1 notch receptor 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16452096) Ensembl
MGI		 PMID:16452096 GO_REF:0000107 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277 		JBrowse link
retinal pigment epithelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFH complement factor H acts_upstream_of_or_within ISO (PMID:23844226), (PMID:25991857) MGI PMID:23844226 PMID:25991857 NCBI chr38:2,878,677...2,956,226 JBrowse link
G CLDN19 claudin 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:626,721...631,643
Ensembl chr15:627,035...631,789 		JBrowse link
G CLDN3 claudin 3 involved_in ISO (PMID:27593915) ARUK-UCL PMID:27593915 NCBI chr 6:6,534,229...6,535,237 JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18582859) Ensembl
MGI		 PMID:18582859 GO_REF:0000107 NCBI chr37:25,616,942...25,622,989 JBrowse link
G MED1 mediator complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,989,257...23,019,350
Ensembl chr 9:22,989,301...23,019,349 		JBrowse link
G MFSD2A MFSD2 lysolipid transporter A, lysophospholipid involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27008858) Ensembl
ARUK-UCL		 PMID:27008858 GO_REF:0000107 NCBI chr15:2,966,433...2,979,030
Ensembl chr15:2,966,461...2,978,968 		JBrowse link
G NDP norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO (PMID:9071226) MGI PMID:9071226 NCBI chr  X:37,949,560...37,975,573
Ensembl chr  X:37,950,489...37,975,346 		JBrowse link
G PAX2 paired box 2 involved_in ISO (PMID:8951055) DFLAT