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ONTOLOGY REPORT - ANNOTATIONS

Term:camera-type eye development
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Accession:GO:0043010 term browser browse the term
Definition:The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field.
Synonyms:alt_id: GO:0001747;   GO:0031075

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camera-type eye development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl-interactor 2 ISO MGI:3526871 (MGI:3525751|PMID:15572692) RGD PMID:15572692 MGI:3525751 NCBI chr 9:67,234,612...67,284,504
Ensembl chr 9:67,234,303...67,282,600 		JBrowse link
G Ahr aryl hydrocarbon receptor ISO (MGI:1889403|PMID:10973493) RGD PMID:10973493 MGI:1889403 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 ISO MGI:1857891|MGI:2180721 (MGI:3055706|PMID:15366004), (MGI:3612223|PMID:16368932) RGD PMID:15366004 PMID:16368932 MGI:3055706 MGI:3612223 NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489 		JBrowse link
G Arhgap35 Rho GTPase activating protein 35 IEA
ISO		 GO_REF:0000107
MGI:2448591 (MGI:1926242|PMID:11044403)		 Ensembl
RGD		 PMID:11044403 GO_REF:0000107 MGI:1926242 NCBI chr 1:78,456,409...78,573,374
Ensembl chr 1:78,456,409...78,573,374 		JBrowse link
G B9d1 B9 domain containing 1 ISO MGI:5301332 (MGI:5300833|PMID:22179047) RGD PMID:22179047 MGI:5300833 NCBI chr10:47,784,294...47,794,399
Ensembl chr10:47,785,033...47,792,590
Ensembl chr10:47,785,033...47,792,590 		JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO MGI:1857137|MGI:2137520 (MGI:1095762|PMID:9268572), (MGI:3043486|PMID:14681194) RGD PMID:9268572 PMID:14681194 MGI:1095762 MGI:3043486 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740 		JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B ISO MGI:1338938 (MGI:3574003|PMID:15673568) RGD PMID:15673568 MGI:3574003 NCBI chr 2:247,392,195...247,662,026
Ensembl chr 2:247,403,920...247,446,882 		JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C ISO (PMID:15454078) RGD PMID:15454078 NCBI chr 4:150,635,808...151,270,790
Ensembl chr 4:150,641,066...150,829,913 		JBrowse link
G Cc2d2a coiled-coil and C2 domain containing 2A ISO MGI:5708063 (MGI:5696765|PMID:24947469) RGD PMID:24947469 MGI:5696765 NCBI chr14:71,895,128...71,979,452
Ensembl chr14:71,895,246...71,973,419 		JBrowse link
G Cdkn1c cyclin-dependent kinase inhibitor 1C ISO MGI:1933758|MGI:3840687 (MGI:3839493|PMID:19276117) RGD PMID:19276117 MGI:3839493 NCBI chr 1:216,661,067...216,663,791
Ensembl chr 1:216,661,080...216,663,721 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 ISO MGI:3588650 (MGI:3611161|PMID:16207732) RGD PMID:16207732 MGI:3611161 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696 		JBrowse link
G Cryaa crystallin, alpha A ISO MGI:1916503 (MGI:2682441|PMID:12546709) RGD PMID:12546709 MGI:2682441 NCBI chr20:10,438,444...10,442,189
Ensembl chr20:10,438,444...10,442,187 		JBrowse link
G Cryab crystallin, alpha B ISO MGI:88515 (MGI:2682441|PMID:12546709) RGD PMID:12546709 MGI:2682441 NCBI chr 8:55,178,543...55,182,546
Ensembl chr 8:55,178,289...55,182,545 		JBrowse link
G Cryba1 crystallin, beta A1 ISO MGI:1857969 (MGI:1350675|PMID:10585769) RGD PMID:10585769 MGI:1350675 NCBI chr10:65,160,777...65,167,504
Ensembl chr10:65,161,152...65,167,494 		JBrowse link
G Cryba4 crystallin, beta A4 ISO (PMID:16960806) RGD PMID:16960806 NCBI chr12:50,407,843...50,414,434
Ensembl chr12:50,407,843...50,414,432 		JBrowse link
G Crybb2 crystallin, beta B2 IEP
ISO		 MGI:2137511 (MGI:2137502|PMID:11381063) RGD PMID:11381063, PMID:8706714 MGI:2137502, RGD:1298813 NCBI chr12:49,577,580...49,588,555
Ensembl chr12:49,578,633...49,588,555 		JBrowse link
G Crygc crystallin, gamma C ISO MGI:2176919 (MGI:2156903|PMID:11773036) RGD PMID:11773036 MGI:2156903 NCBI chr 9:71,786,246...71,788,281
Ensembl chr 9:71,786,248...71,788,281 		JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IEP RGD PMID:15967433 RGD:2306661 NCBI chr 8:62,472,087...62,478,122
Ensembl chr 8:62,472,095...62,478,147 		JBrowse link
G Efemp1 EGF containing fibulin extracellular matrix protein 1 IEA
ISO		 GO_REF:0000107
(PMID:25406291)		 Ensembl
RGD		 PMID:25406291 GO_REF:0000107 NCBI chr14:113,202,382...113,294,993
Ensembl chr14:113,202,419...113,295,014 		JBrowse link
G Fat1 FAT atypical cadherin 1 ISO MGI:2662293 (MGI:5766588|PMID:26114487) RGD PMID:26114487 MGI:5766588 NCBI chr16:50,372,150...50,501,716
Ensembl chr16:50,372,128...50,501,921 		JBrowse link
G Fbn1 fibrillin 1 ISO (PMID:25406291) RGD PMID:25406291 NCBI chr 3:117,569,708...117,766,160
Ensembl chr 3:117,569,697...117,766,120 		JBrowse link
G Fbn2 fibrillin 2 ISO (PMID:25406291) RGD PMID:25406291 NCBI chr18:53,068,495...53,272,254
Ensembl chr18:53,068,495...53,181,503 		JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 ISO MGI:3042750 (MGI:3039989|PMID:15105374) RGD PMID:15105374 MGI:3039989 NCBI chr16:20,645,956...20,652,890
Ensembl chr16:20,645,957...20,652,889 		JBrowse link
G Foxc1 forkhead box C1 ISO MGI:1856705|MGI:1857869 (MGI:1340945|PMID:10395790), (MGI:1355577|PMID:10767326) RGD PMID:10395790 PMID:10767326 MGI:1340945 MGI:1355577 NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484 		JBrowse link
G Foxc2 forkhead box C2 ISO MGI:1857865 (MGI:1355577|PMID:10767326) RGD PMID:10767326 MGI:1355577 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081 		JBrowse link
G Foxe3 forkhead box E3 ISO MGI:2387330 (MGI:1932584|PMID:11309658) RGD PMID:11309658 MGI:1932584 NCBI chr 5:133,724,796...133,725,656
Ensembl chr 5:133,724,796...133,725,656 		JBrowse link
G Foxp2 forkhead box P2 ISO MGI:3723630 (MGI:3723373|PMID:17619227) RGD PMID:17619227 MGI:3723373 NCBI chr 4:41,364,441...41,944,685
Ensembl chr 4:41,364,441...41,942,023 		JBrowse link
G Gas1 growth arrest-specific 1 ISO MGI:2388397 (MGI:3713422|PMID:17525797) RGD PMID:17525797 MGI:3713422 NCBI chr17:4,846,116...4,849,350
Ensembl chr17:4,846,789...4,847,940 		JBrowse link
G Gja8 gap junction protein, alpha 8 ISO MGI:2137525|MGI:3052418 (MGI:2156142|PMID:11782410), (MGI:3047041|PMID:15253273) RGD PMID:11782410 PMID:15253273 MGI:2156142 MGI:3047041 NCBI chr 2:199,050,854...199,052,470
Ensembl chr 2:199,050,854...199,052,470 		JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:98297 (MGI:3807419|PMID:18582859) RGD PMID:18582859 MGI:3807419 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036 		JBrowse link
G Gpd2 glycerol-3-phosphate dehydrogenase 2 ISO MGI:1915913 (MGI:4947900|PMID:21296886) RGD PMID:21296886 MGI:4947900 NCBI chr 3:43,223,892...43,359,069
Ensembl chr 3:43,255,567...43,359,074 		JBrowse link
G Grhl2 grainyhead-like transcription factor 2 ISO MGI:4942413 (MGI:4943100|PMID:21377456) RGD PMID:21377456 MGI:4943100 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 ISS
ISO		 GO_REF:0000024
(MGI:3703278|PMID:17331197)		 UniProt
RGD		 PMID:17331197 GO_REF:0000024 MGI:3703278 NCBI chr 5:172,364,421...172,365,188
Ensembl chr 5:172,364,421...172,365,188 		JBrowse link
G Hesx1 HESX homeobox 1 ISO MGI:3822474 (MGI:3821905|PMID:19093031) RGD PMID:19093031 MGI:3821905 NCBI chr16:2,616,538...2,636,708
Ensembl chr16:2,634,603...2,636,708 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP RGD PMID:16488668 RGD:10002779 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654 		JBrowse link
G Hsf4 heat shock transcription factor 4 ISO MGI:3056560|MGI:3057199 (MGI:3056833|PMID:15483628), (MGI:3721138|PMID:16595169) RGD PMID:15483628 PMID:16595169 MGI:3056833 MGI:3721138 NCBI chr19:37,225,800...37,232,048
Ensembl chr19:37,226,186...37,231,912 		JBrowse link
G Ihh Indian hedgehog signaling molecule ISO MGI:1934258 (MGI:3807419|PMID:18582859) RGD PMID:18582859 MGI:3807419 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440 		JBrowse link
G Jag1 jagged canonical Notch ligand 1 ISO MGI:1857713 (MGI:1336582|PMID:10196361) RGD PMID:10196361 MGI:1336582 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770 		JBrowse link
G Lama1 laminin subunit alpha 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:115,916,907...116,042,123
Ensembl chr 9:115,916,907...116,042,123 		JBrowse link
G Lim2 lens intrinsic membrane protein 2 ISO MGI:1862040 (MGI:1197732|PMID:9238094) RGD PMID:9238094 MGI:1197732 NCBI chr 1:98,495,082...98,501,248
Ensembl chr 1:98,495,082...98,501,249 		JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta ISO MGI:2158463|MGI:2386570|MGI:3714802 (MGI:1353150|PMID:10660670), (MGI:4461349|PMID:20568247) RGD PMID:10660670 PMID:20568247 MGI:1353150 MGI:4461349 NCBI chr 3:12,608,748...12,686,937
Ensembl chr 3:12,609,574...12,686,869 		JBrowse link
G Mab21l1 mab-21 like 1 ISO (MGI:2652201|PMID:12642482) RGD PMID:12642482 MGI:2652201 NCBI chr 2:145,174,876...145,177,265
Ensembl chr 2:145,174,876...145,177,265 		JBrowse link
G Mab21l2 mab-21 like 2 ISO MGI:3511363 (MGI:3510098|PMID:15385160) RGD PMID:15385160 MGI:3510098 NCBI chr 2:185,849,749...185,852,833
Ensembl chr 2:185,850,232...185,852,759 		JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 ISO MGI:2676654 (MGI:2674169|PMID:12941696) RGD PMID:12941696 MGI:2674169 NCBI chr 2:43,329,516...43,393,203
Ensembl chr 2:43,329,516...43,393,207 		JBrowse link
G Med1 mediator complex subunit 1 ISO MGI:2684189 (MGI:2682174|PMID:14500757) RGD PMID:14500757 MGI:2682174 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880 		JBrowse link
G Mitf melanocyte inducing transcription factor ISO MGI:88401 (MGI:3512656|PMID:15576400) RGD PMID:15576400 MGI:3512656 NCBI chr 4:130,172,484...130,425,496
Ensembl chr 4:130,172,727...130,425,532 		JBrowse link
G Mterf4 mitochondrial transcription termination factor 4 ISO MGI:5288506 (MGI:5287350|PMID:21531335) RGD PMID:21531335 MGI:5287350 NCBI chr 9:100,440,482...100,445,158
Ensembl chr 9:100,440,486...100,445,158 		JBrowse link
G Mtnr1a melatonin receptor 1A IEP RGD PMID:12890503 RGD:9588674 NCBI chr16:50,339,358...50,358,809
Ensembl chr16:50,339,358...50,358,809 		JBrowse link
G Mtnr1b melatonin receptor 1B IEP RGD PMID:12890503 RGD:9588674 NCBI chr 8:14,359,270...14,373,894
Ensembl chr 8:14,359,270...14,373,894 		JBrowse link
G Myf5 myogenic factor 5 ISO MGI:1857973|MGI:3055340 (MGI:3849775|PMID:19531352) RGD PMID:19531352 MGI:3849775 NCBI chr 7:49,729,533...49,732,974
Ensembl chr 7:49,729,533...49,732,764 		JBrowse link
G Neurod1 neuronal differentiation 1 ISO MGI:108055 (MGI:2158684|PMID:11861467) RGD PMID:11861467 MGI:2158684 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741 		JBrowse link
G Neurod4 neuronal differentiation 4 ISO MGI:1339708 (MGI:2158684|PMID:11861467) RGD PMID:11861467 MGI:2158684 NCBI chr 7:9,699,964...9,712,067
Ensembl chr 7:9,699,961...9,711,928 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 ISO MGI:2176490|MGI:2176560 (MGI:3054148|PMID:15371513), (MGI:3582135|PMID:16000615) RGD PMID:15371513 PMID:16000615 MGI:3054148 MGI:3582135 NCBI chr20:47,286,843...47,306,318
Ensembl chr20:47,288,137...47,306,318 		JBrowse link
G Pax2 paired box 2 ISS
ISO		 GO_REF:0000024
MGI:1857673 (MGI:2662558|PMID:12756174)		 UniProt
RGD		 PMID:12756174 GO_REF:0000024 MGI:2662558 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329 		JBrowse link
G Pax6 paired box 6 ISO MGI:102764|MGI:108564|MGI:1856158|MGI:1931308|MGI:1934347|MGI:1934348 (MGI:1927276|PMID:11069887), (MGI:1928799|PMID:11062307), (MGI:2181466|PMID:12072567), (MGI:2384485|PMID:12183364), (MGI:2654287|PMID:12648492), (MGI:2662558|PMID:12756174), (MGI:3584303|PMID:16080917) RGD PMID:11062307 PMID:11069887 PMID:12072567 PMID:12183364 PMID:12648492 PMID:12756174 PMID:16080917 MGI:1927276 MGI:1928799 MGI:2181466 MGI:2384485 MGI:2654287 MGI:2662558 MGI:3584303 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624 		JBrowse link
G Pcnt pericentrin ISO MGI:4340776 (MGI:5696764|PMID:25220058) RGD PMID:25220058 MGI:5696764 NCBI chr20:12,943,523...13,038,615
Ensembl chr20:12,944,786...13,038,431 		JBrowse link
G Pitx2 paired-like homeodomain 2 ISO (PMID:9618168) RGD PMID:9618168 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129 		JBrowse link
G Pknox1 PBX/knotted 1 homeobox 1 ISO MGI:3530910 (MGI:3653971|PMID:16847320) RGD PMID:16847320 MGI:3653971 NCBI chr20:10,331,608...10,358,922
Ensembl chr20:10,334,308...10,358,922 		JBrowse link
G Prss56 serine protease 56 ISO (PMID:21397065)
MGI:5444189 (MGI:5441705|PMID:21532570)		 RGD PMID:21397065 PMID:21532570 MGI:5441705 NCBI chr 9:94,278,981...94,284,111
Ensembl chr 9:94,279,155...94,283,919 		JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 ISO
IEA		 (PMID:20512159)
GO_REF:0000107		 RGD
Ensembl		 PMID:20512159 GO_REF:0000107 NCBI chr13:44,578,208...44,649,876
Ensembl chr13:44,615,553...44,648,620 		JBrowse link
G Rarg retinoic acid receptor, gamma ISO MGI:98214 (MGI:1096258|PMID:9376317) RGD PMID:9376317 MGI:1096258 NCBI chr 7:143,840,739...143,863,206
Ensembl chr 7:143,839,980...143,863,186 		JBrowse link
G Rax retina and anterior neural fold homeobox IEA
ISO		 GO_REF:0000107
MGI:1856862|MGI:2152531 (MGI:1929394|PMID:11105055), (MGI:3575215|PMID:15789424), (MGI:48767|PMID:17247120), (MGI:54439|PMID:640224), (MGI:61292|PMID:13970081)		 Ensembl
RGD		 PMID:640224 PMID:11105055 PMID:13970081 PMID:15789424 PMID:17247120 GO_REF:0000107 MGI:1929394 MGI:3575215 MGI:48767 MGI:54439 MGI:61292 NCBI chr18:61,638,352...61,642,056
Ensembl chr18:61,638,352...61,642,056 		JBrowse link
G Rcn1 reticulocalbin 1 ISO (MGI:4355498|PMID:19474196) RGD PMID:19474196 MGI:4355498 NCBI chr 3:95,404,863...95,419,110
Ensembl chr 3:95,406,284...95,418,679 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 IEP RGD PMID:9512345 RGD:633787 NCBI chr 2:266,141,581...266,169,197
Ensembl chr 2:266,141,581...266,169,197 		JBrowse link
G Rpgrip1l Rpgrip1-like ISO MGI:3716208 (MGI:3715393|PMID:17553904), (MGI:3716248|PMID:17558409) RGD PMID:17553904 PMID:17558409 MGI:3715393 MGI:3716248 NCBI chr19:17,115,266...17,208,055
Ensembl chr19:17,115,412...17,208,055 		JBrowse link
G Rxra retinoid X receptor alpha ISO MGI:97858 (MGI:1096258|PMID:9376317) RGD PMID:9376317 MGI:1096258 NCBI chr 3:6,272,560...6,295,354
Ensembl chr 3:6,211,789...6,295,908 		JBrowse link
G Shh sonic hedgehog signaling molecule IEA
ISO		 GO_REF:0000107
MGI:1934268|MGI:3052661|MGI:95729 (MGI:2385969|PMID:12195432), (MGI:2662556|PMID:12756179), (MGI:3608482|PMID:16236765), (MGI:3807419|PMID:18582859)		 Ensembl
RGD		 PMID:12195432 PMID:12756179 PMID:16236765 PMID:18582859 GO_REF:0000107 MGI:2385969 MGI:2662556 MGI:3608482 MGI:3807419 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691 		JBrowse link
G Six3 SIX homeobox 3 ISO MGI:97490 (MGI:2181466|PMID:12072567) RGD PMID:12072567 MGI:2181466 NCBI chr 6:8,886,730...8,891,094
Ensembl chr 6:8,886,591...8,889,925 		JBrowse link
G Ski SKI proto-oncogene ISO MGI:2177555 (MGI:2176418|PMID:11731796) RGD PMID:11731796 MGI:2176418 NCBI chr 5:172,556,196...172,623,878
Ensembl chr 5:172,559,135...172,623,899 		JBrowse link
G Slc25a25 solute carrier family 25 member 25 ISO MGI:99778 (MGI:4947900|PMID:21296886) RGD PMID:21296886 MGI:4947900 NCBI chr 3:11,442,396...11,476,186
Ensembl chr 3:11,442,397...11,452,529 		JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 ISO MGI:4417931 (MGI:5513052|PMID:23543054) RGD PMID:23543054 MGI:5513052 NCBI chr15:95,507,632...95,514,259
Ensembl chr15:95,507,640...95,514,259 		JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 ISO
ISS		 (PMID:21901792)
GO_REF:0000024		 RGD
UniProt		 PMID:21901792 GO_REF:0000024 NCBI chr 8:62,925,364...62,944,438
Ensembl chr 8:62,925,357...62,944,437 		JBrowse link
G Tbc1d20 TBC1 domain family, member 20 ISO MGI:1856684 (MGI:3029604|PMID:14757819) RGD PMID:14757819 MGI:3029604 NCBI chr 3:147,772,006...147,790,946
Ensembl chr 3:147,772,165...147,789,158 		JBrowse link
G Tbc1d32 TBC1 domain family, member 32 ISO MGI:4127851|MGI:4440463 (MGI:4439200|PMID:20159594) RGD PMID:20159594 MGI:4439200 NCBI chr20:37,463,879...37,701,268
Ensembl chr20:37,465,278...37,700,937 		JBrowse link
G Tmem231 transmembrane protein 231 ISO MGI:4284576 (MGI:5300833|PMID:22179047) RGD PMID:22179047 MGI:5300833 NCBI chr19:44,137,444...44,158,624
Ensembl chr19:44,137,423...44,158,624 		JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan ISO
ISS		 (MGI:5285004|PMID:21856951)
GO_REF:0000024		 RGD
UniProt		 PMID:21856951 GO_REF:0000024 MGI:5285004 NCBI chr 1:163,317,281...163,328,697
Ensembl chr 1:163,317,282...163,328,591 		JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 ISO MGI:88180 (MGI:3043486|PMID:14681194) RGD PMID:14681194 MGI:3043486 NCBI chr 9:113,699,151...113,732,601
Ensembl chr 9:113,699,170...113,732,622 		JBrowse link
G Vax1 ventral anterior homeobox 1 ISO MGI:1346018 (MGI:3578573|PMID:15905411) RGD PMID:15905411 MGI:3578573 NCBI chr 1:280,334,897...280,338,813
Ensembl chr 1:280,334,897...280,338,813 		JBrowse link
G Vax2 ventral anterior homeobox 2 ISO MGI:1277163 (MGI:3578573|PMID:15905411) RGD PMID:15905411 MGI:3578573 NCBI chr 4:115,388,839...115,412,515
Ensembl chr 4:115,388,839...115,412,515 		JBrowse link
G Vsx2 visual system homeobox 2 ISO MGI:104554 (MGI:3512656|PMID:15576400) RGD PMID:15576400 MGI:3512656 NCBI chr 6:108,285,031...108,308,588
Ensembl chr 6:108,285,822...108,308,587 		JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector IEA
ISO		 GO_REF:0000107
MGI:5558098|MGI:5558100 (MGI:5544506|PMID:24302887)		 Ensembl
RGD		 PMID:24302887 GO_REF:0000107 MGI:5544506 NCBI chr14:106,393,959...106,759,511
Ensembl chr14:106,393,959...106,759,505 		JBrowse link
G Wt1 WT1 transcription factor ISS
ISO		 GO_REF:0000024
MGI:1857268|MGI:2183642 (MGI:2176638|PMID:11889045), (MGI:3574744|PMID:15716344)		 UniProt
RGD		 PMID:11889045 PMID:15716344 GO_REF:0000024 MGI:2176638 MGI:3574744 NCBI chr 3:95,133,221...95,180,574
Ensembl chr 3:95,133,713...95,180,564 		JBrowse link
amacrine cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxn4 forkhead box N4 ISO (MGI:3054139|PMID:15363391) RGD PMID:15363391 MGI:3054139 NCBI chr12:48,101,012...48,121,281
Ensembl chr12:48,101,673...48,121,270 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 ISO (MGI:5629913|PMID:25654255) RGD PMID:25654255 MGI:5629913 NCBI chr14:91,782,281...91,867,828
Ensembl chr14:91,782,354...91,867,424 		JBrowse link
G Miat myocardial infarction associated transcript ISO (MGI:4458994|PMID:20459797) RGD PMID:20459797 MGI:4458994 NCBI chr12:50,447,251...50,461,859 JBrowse link
G Neurod1 neuronal differentiation 1 ISS
ISO		 GO_REF:0000024
(MGI:2158684|PMID:11861467)		 UniProt
RGD		 PMID:11861467 GO_REF:0000024 MGI:2158684 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741 		JBrowse link
G Neurod4 neuronal differentiation 4 ISO (MGI:2158684|PMID:11861467) RGD PMID:11861467 MGI:2158684 NCBI chr 7:9,699,964...9,712,067
Ensembl chr 7:9,699,961...9,711,928 		JBrowse link
G Ptf1a pancreas associated transcription factor 1a ISS
ISO		 GO_REF:0000024
(MGI:3691257|PMID:17075007)		 UniProt
RGD		 PMID:17075007 GO_REF:0000024 MGI:3691257 NCBI chr17:86,199,623...86,201,477
Ensembl chr17:86,199,623...86,201,477 		JBrowse link
G Rorb RAR-related orphan receptor B ISS
ISO		 GO_REF:0000024
(MGI:5546314|PMID:23652001)		 UniProt
RGD		 PMID:23652001 GO_REF:0000024 MGI:5546314 NCBI chr 1:234,252,757...234,442,597
Ensembl chr 1:234,252,757...234,435,839 		JBrowse link
camera-type eye morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 ISO MGI:1857807 (MGI:2180433|PMID:11891232) RGD PMID:11891232 MGI:2180433 NCBI chr 4:85,551,503...85,563,683
Ensembl chr 4:85,551,502...85,569,360 		JBrowse link
G Aqp5 aquaporin 5 ISO MGI:2150059 (MGI:2180433|PMID:11891232) RGD PMID:11891232 MGI:2180433 NCBI chr 7:141,249,044...141,252,576
Ensembl chr 7:141,249,044...141,252,578 		JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO MGI:88180 (MGI:1095762|PMID:9268572) RGD PMID:9268572 MGI:1095762 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740 		JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO MGI:1857654|MGI:2136986 (MGI:3610441|PMID:16154126), (MGI:3701027|PMID:16854970) RGD PMID:16154126 PMID:16854970 MGI:3610441 MGI:3701027 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399 		JBrowse link
G Col8a1 collagen type VIII alpha 1 chain ISO MGI:88464 (MGI:3587134|PMID:16051690) RGD PMID:16051690 MGI:3587134 NCBI chr11:44,877,690...45,006,203
Ensembl chr11:44,877,859...45,007,891 		JBrowse link
G Col8a2 collagen type VIII alpha 2 chain ISO MGI:88463 (MGI:3587134|PMID:16051690) RGD PMID:16051690 MGI:3587134 NCBI chr 5:144,308,527...144,335,142
Ensembl chr 5:144,308,611...144,335,172 		JBrowse link
G Ephb1 Eph receptor B1 ISO MGI:2677305 (MGI:2675767|PMID:12971893) RGD PMID:12971893 MGI:2675767 NCBI chr 8:110,376,954...110,813,193
Ensembl chr 8:110,376,954...110,813,000 		JBrowse link
G Ephb2 Eph receptor B2 ISO MGI:2149765 (MGI:2675767|PMID:12971893) RGD PMID:12971893 MGI:2675767 NCBI chr 5:155,024,478...155,143,539
Ensembl chr 5:155,022,493...155,204,456 		JBrowse link
G Fat1 FAT atypical cadherin 1 ISO MGI:2662293 (MGI:5766588|PMID:26114487) RGD PMID:26114487 MGI:5766588 NCBI chr16:50,372,150...50,501,716
Ensembl chr16:50,372,128...50,501,921 		JBrowse link
G Gdf11 growth differentiation factor 11 ISO MGI:2449673 (MGI:3581514|PMID:15976303) RGD PMID:15976303 MGI:3581514 NCBI chr 7:3,306,863...3,315,856
Ensembl chr 7:3,306,863...3,315,856 		JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:1856276 (MGI:52587|PMID:8387379) RGD PMID:8387379 MGI:52587 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036 		JBrowse link
G Grcc10 gene rich cluster, C10 gene ISO (PMID:23453665), (PMID:23633300), (PMID:24798461) RGD PMID:23453665 PMID:23633300 PMID:24798461 NCBI chr 4:157,264,383...157,266,042
Ensembl chr 4:157,264,383...157,266,018 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO MGI:103223 (MGI:5429122|PMID:22627278) RGD PMID:22627278 MGI:5429122 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052 		JBrowse link
G Ift122 intraflagellar transport 122 ISO (MGI:3827087|PMID:19000668) RGD PMID:19000668 MGI:3827087 NCBI chr 4:147,756,574...147,826,983
Ensembl chr 4:147,756,553...147,826,997 		JBrowse link
G Mfn2 mitofusin 2 ISO MGI:1861626 (MGI:3589043|PMID:16104381) RGD PMID:16104381 MGI:3589043 NCBI chr 5:164,684,244...164,715,414
Ensembl chr 5:164,684,509...164,714,145 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 ISO MGI:3605480 (MGI:3604842|PMID:15728677) RGD PMID:15728677 MGI:3604842 NCBI chr 8:48,094,233...48,198,499
Ensembl chr 8:48,094,673...48,157,305 		JBrowse link
G Nf1 neurofibromin 1 IEA
ISO
ISS		 GO_REF:0000107
MGI:1857444 (MGI:66069|PMID:7926784)
GO_REF:0000024		 Ensembl
RGD
HGNC		 PMID:7926784 GO_REF:0000024 GO_REF:0000107 MGI:66069 NCBI chr10:66,732,460...66,928,706
Ensembl chr10:66,690,133...66,928,903 		JBrowse link
G Ring1 ring finger protein 1 ISO MGI:99150 (MGI:3628673|PMID:16624538) RGD PMID:16624538 MGI:3628673 NCBI chr20:3,812,287...3,815,834
Ensembl chr20:3,812,287...3,815,834 		JBrowse link
G Ski SKI proto-oncogene ISO MGI:2177555 (MGI:3693412|PMID:17003410) RGD PMID:17003410 MGI:3693412 NCBI chr 5:172,556,196...172,623,878
Ensembl chr 5:172,559,135...172,623,899 		JBrowse link
G Tenm3 teneurin transmembrane protein 3 ISO (PMID:22766609) RGD PMID:22766609 NCBI chr16:46,422,676...46,929,023
Ensembl chr16:46,731,403...46,926,245 		JBrowse link
G Vegfa vascular endothelial growth factor A ISO MGI:1931048|MGI:2387296 (MGI:3607459|PMID:16251428) RGD PMID:16251428 MGI:3607459 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO MGI:106918|MGI:2136645 (MGI:5429122|PMID:22627278) RGD PMID:22627278 MGI:5429122 NCBI chr 4:145,580,869...145,587,835
Ensembl chr 4:145,580,799...145,587,845 		JBrowse link
G Yy1 YY1 transcription factor ISO MGI:1101770 (MGI:3628673|PMID:16624538) RGD PMID:16624538 MGI:3628673 NCBI chr 6:132,702,443...132,726,848
Ensembl chr 6:132,702,448...132,727,046 		JBrowse link
camera-type eye photoreceptor cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dscam DS cell adhesion molecule ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:37,004,776...37,599,866
Ensembl chr11:37,004,902...37,253,776 		JBrowse link
G Prom1 prominin 1 ISO
IBA		 (PMID:18654668)
PMID:21873635
(MGI:3838023|PMID:19228982)		 RGD PMID:18654668 PMID:19228982, PMID:21873635 MGI:3838023, RGD:13792537 NCBI chr14:71,532,321...71,637,400
Ensembl chr14:71,533,063...71,637,417 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 ISO (MGI:4437581|PMID:20300562) RGD PMID:20300562 MGI:4437581 NCBI chr 1:225,126,732...225,128,740
Ensembl chr 1:225,126,734...225,128,740 		JBrowse link
G Sdk2 sidekick cell adhesion molecule 2 ISO (MGI:5693671|PMID:26287463) RGD PMID:26287463 MGI:5693671 NCBI chr10:102,299,593...102,576,554
Ensembl chr10:102,303,028...102,576,878 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 ISO GO:0060219 (MGI:2680888|PMID:12808454) RGD PMID:12808454 MGI:2680888 NCBI chr15:11,832,611...11,912,923
Ensembl chr15:11,836,286...11,912,916 		JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 ISO MGI:5140723 (MGI:5014119|PMID:21646512) RGD PMID:21646512 MGI:5014119 NCBI chr 6:122,920,308...122,974,525
Ensembl chr 6:122,920,317...122,974,522 		JBrowse link
camera-type eye photoreceptor cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ihh Indian hedgehog signaling molecule ISO MGI:1934258 (MGI:3807419|PMID:18582859) RGD PMID:18582859 MGI:3807419 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440 		JBrowse link
ciliary body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxe3 forkhead box E3 ISS
ISO		 PMID:17064680
(MGI:3703484|PMID:17064680)		 RGD PMID:17064680, PMID:17064680 MGI:3703484, RGD:10047226 NCBI chr 5:133,724,796...133,725,656
Ensembl chr 5:133,724,796...133,725,656 		JBrowse link
G Jag1 jagged canonical Notch ligand 1 IEA
ISO		 GO_REF:0000107
MGI:3692444 (MGI:5492288|PMID:23676271)		 Ensembl
RGD		 PMID:23676271 GO_REF:0000107 MGI:5492288 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770 		JBrowse link
G Notch2 notch receptor 2 IEA
ISO		 GO_REF:0000107
MGI:3617328 (MGI:5492288|PMID:23676271)		 Ensembl
RGD		 PMID:23676271 GO_REF:0000107 MGI:5492288 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215 		JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(MGI:5285004|PMID:21856951)		 Ensembl
UniProt
RGD		 PMID:21856951 GO_REF:0000024 GO_REF:0000107 MGI:5285004 NCBI chr 1:163,317,281...163,328,697
Ensembl chr 1:163,317,282...163,328,591 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO MGI:2136645 (MGI:5429122|PMID:22627278) RGD PMID:22627278 MGI:5429122 NCBI chr 4:145,580,869...145,587,835
Ensembl chr 4:145,580,799...145,587,845 		JBrowse link
closure of optic fissure term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phactr4 phosphatase and actin regulator 4 ISO (MGI:3719969|PMID:17609112) RGD PMID:17609112 MGI:3719969 NCBI chr 5:150,533,895...150,609,423
Ensembl chr 5:150,546,430...150,609,352 		JBrowse link
G Sox11 SRY-box transcription factor 11 ISS
ISO		 GO_REF:0000024
(MGI:3797299|PMID:18423449)		 UniProt
RGD		 PMID:18423449 GO_REF:0000024 MGI:3797299 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983 		JBrowse link
cornea development in camera-type eye term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxe3 forkhead box E3 ISS
ISO		 PMID:17064680
(MGI:3703484|PMID:17064680)		 RGD PMID:17064680, PMID:17064680 MGI:3703484, RGD:10047226 NCBI chr 5:133,724,796...133,725,656
Ensembl chr 5:133,724,796...133,725,656 		JBrowse link
G Kera keratocan ISO UniProtKB:O60938 (MGI:1855733|PMID:10802664) RGD PMID:10802664 MGI:1855733 NCBI chr 7:38,858,062...38,865,515
Ensembl chr 7:38,858,062...38,865,515 		JBrowse link
G Krt12 keratin 12 ISO
ISS
IEA		 (PMID:26758872)
MGI:3051854 (MGI:5752087|PMID:26758872), (MGI:85415|PMID:8977471)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:8977471 PMID:26758872 GO_REF:0000024 GO_REF:0000107 MGI:5752087 MGI:85415 NCBI chr10:87,328,547...87,336,710
Ensembl chr10:87,328,549...87,335,823 		JBrowse link
G Limk2 LIM domain kinase 2 ISO MGI:3612836 (MGI:5646594|PMID:26234751) RGD PMID:26234751 MGI:5646594 NCBI chr14:83,564,048...83,641,996
Ensembl chr14:83,573,928...83,641,892 		JBrowse link
G Pax6 paired box 6 ISO (PMID:7550230) RGD PMID:7550230 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624 		JBrowse link
G Sox11 SRY-box transcription factor 11 ISS
ISO		 GO_REF:0000024
(MGI:3797299|PMID:18423449)		 UniProt
RGD		 PMID:18423449 GO_REF:0000024 MGI:3797299 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983 		JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO MGI:2183192 (MGI:3610667|PMID:16186342) RGD PMID:16186342 MGI:3610667 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457 		JBrowse link
G Twist2 twist family bHLH transcription factor 2 ISO MGI:3044412 (MGI:4949824|PMID:20574024) RGD PMID:20574024 MGI:4949824 NCBI chr 9:98,924,134...98,968,510
Ensembl chr 9:98,924,134...98,968,510 		JBrowse link
embryonic camera-type eye development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 ISO MGI:1861722 (MGI:3700411|PMID:17184764) RGD PMID:17184764 MGI:3700411 NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 ISO MGI:107928 (MGI:3042765|PMID:14623956), (MGI:3700411|PMID:17184764) RGD PMID:14623956 PMID:17184764 MGI:3042765 MGI:3700411 NCBI chr 1:127,302,920...127,337,828
Ensembl chr 1:127,301,128...127,337,882 		JBrowse link
G Cdk20 cyclin-dependent kinase 20 ISO MGI:6113512 (MGI:5912686|PMID:28817564) RGD PMID:28817564 MGI:5912686 NCBI chr17:1,935,900...1,942,867
Ensembl chr17:1,936,163...1,942,865 		JBrowse link
G Fgf10 fibroblast growth factor 10 ISO MGI:1859647 (MGI:3588480|PMID:15958512) RGD PMID:15958512 MGI:3588480 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369 		JBrowse link
G Fzd5 frizzled class receptor 5 ISO MGI:3574771|MGI:3583769 (MGI:3821812|PMID:18791178) RGD PMID:18791178 MGI:3821812 NCBI chr 9:71,443,784...71,445,541
Ensembl chr 9:71,443,588...71,445,739 		JBrowse link
G Ift140 intraflagellar transport 140 ISO MGI:4458412 (MGI:5505384|PMID:23469164) RGD PMID:23469164 MGI:5505384 NCBI chr10:14,373,668...14,461,509
Ensembl chr10:14,373,679...14,461,160 		JBrowse link
G Nes nestin ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 2:187,343,109...187,352,972
Ensembl chr 2:187,344,056...187,352,969 		JBrowse link
G Pitx2 paired-like homeodomain 2 ISO MGI:1857844|MGI:1857846|MGI:1857880 (MGI:1344731|PMID:10498698), (MGI:1347482|PMID:10572050) RGD PMID:10498698 PMID:10572050 MGI:1344731 MGI:1347482 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129 		JBrowse link
G Ppp1r13l protein phosphatase 1, regulatory subunit 13 like ISO MGI:3575541 (MGI:3530389|PMID:15661756) RGD PMID:15661756 MGI:3530389 NCBI chr 1:80,271,288...80,290,946
Ensembl chr 1:80,279,706...80,290,408 		JBrowse link
G Rara retinoic acid receptor, alpha ISO MGI:97858 (MGI:69060|PMID:7607067) RGD PMID:7607067 MGI:69060 NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210 		JBrowse link
G Rarg retinoic acid receptor, gamma ISO MGI:97856 (MGI:69060|PMID:7607067) RGD PMID:7607067 MGI:69060 NCBI chr 7:143,840,739...143,863,206
Ensembl chr 7:143,839,980...143,863,186 		JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO (MGI:3709664|PMID:17473173) RGD PMID:17473173 MGI:3709664 NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030 		JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 ISO MGI:4129326 (MGI:5298450|PMID:21945076) RGD PMID:21945076 MGI:5298450 NCBI chr 9:98,621,499...98,658,223
Ensembl chr 9:98,621,506...98,656,901 		JBrowse link
G Tulp3 TUB like protein 3 ISO MGI:2388066 (MGI:3841503|PMID:19286674) RGD PMID:19286674 MGI:3841503 NCBI chr 4:161,636,084...161,677,807
Ensembl chr 4:161,637,892...161,658,519 		JBrowse link
G Wdr19 WD repeat domain 19 ISO MGI:5315747 (MGI:5314316|PMID:22228095) RGD PMID:22228095 MGI:5314316 NCBI chr14:44,705,012...44,767,120
Ensembl chr14:44,705,012...44,767,120 		JBrowse link
embryonic camera-type eye formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stra6 signaling receptor and transporter of retinol STRA6 ISO
IEA		 (PMID:17273977)
GO_REF:0000107		 RGD
Ensembl		 PMID:17273977 GO_REF:0000107 NCBI chr 8:62,925,364...62,944,438
Ensembl chr 8:62,925,357...62,944,437 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO (PMID:17070479) RGD PMID:17070479 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214 		JBrowse link
embryonic camera-type eye morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 ISO MGI:1857654 (MGI:1332362|PMID:10049573) RGD PMID:10049573 MGI:1332362 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 ISO MGI:97490 (MGI:3807101|PMID:18653562) RGD PMID:18653562 MGI:3807101 NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786 		JBrowse link
G Cryaa crystallin, alpha A ISO MGI:3777403 (MGI:3775669|PMID:18056999) RGD PMID:18056999 MGI:3775669 NCBI chr20:10,438,444...10,442,189
Ensembl chr20:10,438,444...10,442,187 		JBrowse link
G Foxf2 forkhead box F2 ISO (MGI:5297296|PMID:22022403) RGD PMID:22022403 MGI:5297296 NCBI chr17:34,150,417...34,156,450 JBrowse link
G Fzd5 frizzled class receptor 5 IEA
ISO		 GO_REF:0000107
(MGI:3826935|PMID:18832390)		 Ensembl
RGD		 PMID:18832390 GO_REF:0000107 MGI:3826935 NCBI chr 9:71,443,784...71,445,541
Ensembl chr 9:71,443,588...71,445,739 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 IEA
ISO		 GO_REF:0000107
(MGI:4818711|PMID:20579985)		 Ensembl
RGD		 PMID:20579985 GO_REF:0000107 MGI:4818711 NCBI chr 2:206,224,015...206,274,910
Ensembl chr 2:206,224,015...206,274,079 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (MGI:4818711|PMID:20579985) RGD PMID:20579985 MGI:4818711 NCBI chr 4:66,438,390...66,625,183
Ensembl chr 4:66,445,266...66,624,912 		JBrowse link
G Ift122 intraflagellar transport 122 ISO MGI:3578529 (MGI:6094959|PMID:28778798) RGD PMID:28778798 MGI:6094959 NCBI chr 4:147,756,574...147,826,983
Ensembl chr 4:147,756,553...147,826,997 		JBrowse link
G Ift172 intraflagellar transport 172 ISO MGI:2682066 (MGI:6094959|PMID:28778798) RGD PMID:28778798 MGI:6094959 NCBI chr 6:26,390,686...26,485,459 JBrowse link
G Ihh Indian hedgehog signaling molecule ISO MGI:1934258 (MGI:3807419|PMID:18582859) RGD PMID:18582859 MGI:3807419 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440 		JBrowse link
G Kdm2b lysine demethylase 2B ISO (MGI:4949568|PMID:21220025) RGD PMID:21220025 MGI:4949568 NCBI chr12:39,021,924...39,161,954
Ensembl chr12:39,078,119...39,161,956 		JBrowse link
G Lrp6 LDL receptor related protein 6 ISO
IBA		 MGI:2156191|MGI:4415718 (MGI:3823171|PMID:18985738), (MGI:4413396|PMID:19653321)
PMID:21873635		 RGD PMID:18985738 PMID:19653321, PMID:21873635 MGI:3823171 MGI:4413396, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751 		JBrowse link
G Pax6 paired box 6 IEA
ISO		 GO_REF:0000107
MGI:1306784 (MGI:3807101|PMID:18653562)		 Ensembl
RGD		 PMID:18653562 GO_REF:0000107 MGI:3807101 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624 		JBrowse link
G Sp1 Sp1 transcription factor ISO MGI:1277166 (MGI:3717030|PMID:17584888) RGD PMID:17584888 MGI:3717030 NCBI chr 7:144,014,173...144,044,635
Ensembl chr 7:144,014,173...144,044,629 		JBrowse link
G Sp3 Sp3 transcription factor ISO MGI:98372 (MGI:3717030|PMID:17584888) RGD PMID:17584888 MGI:3717030 NCBI chr 3:59,644,579...59,689,011
Ensembl chr 3:59,646,015...59,688,692 		JBrowse link
G Tbx2 T-box transcription factor 2 ISO (MGI:3487212|PMID:15459098) RGD PMID:15459098 MGI:3487212 NCBI chr10:73,278,932...73,290,764
Ensembl chr10:73,279,119...73,289,921 		JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO MGI:2176682 (MGI:1313057|PMID:9811866) RGD PMID:9811866 MGI:1313057 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457 		JBrowse link
G Th tyrosine hydroxylase ISO (MGI:3617102|PMID:16445854) RGD PMID:16445854 MGI:3617102 NCBI chr 1:216,073,034...216,080,287
Ensembl chr 1:216,073,031...216,080,287 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 IEA
ISO		 GO_REF:0000107
MGI:1857515 (MGI:3790562|PMID:18436818)		 Ensembl
RGD		 PMID:18436818 GO_REF:0000107 MGI:3790562 NCBI chr17:54,656,627...54,714,920
Ensembl chr17:54,658,463...54,714,914 		JBrowse link
embryonic retina morphogenesis in camera-type eye term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion associated, oncogene regulated IEA
ISO		 GO_REF:0000107
MGI:2653120 (MGI:4422144|PMID:19754878)		 Ensembl
RGD		 PMID:19754878 GO_REF:0000107 MGI:4422144 NCBI chr 8:36,625,757...36,712,091
Ensembl chr 8:36,625,733...36,710,949 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 IEA
ISO		 GO_REF:0000107
(MGI:4818711|PMID:20579985)		 Ensembl
RGD		 PMID:20579985 GO_REF:0000107 MGI:4818711 NCBI chr 2:206,224,015...206,274,910
Ensembl chr 2:206,224,015...206,274,079 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (MGI:4818711|PMID:20579985) RGD PMID:20579985 MGI:4818711 NCBI chr 4:66,438,390...66,625,183
Ensembl chr 4:66,445,266...66,624,912 		JBrowse link
G Lhx1 LIM homeobox 1 ISS
ISO		 GO_REF:0000024
(MGI:3772525|PMID:18094249)		 UniProt
RGD		 PMID:18094249 GO_REF:0000024 MGI:3772525 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293 		JBrowse link
G Lrp6 LDL receptor related protein 6 ISO
IBA		 MGI:4415718 (MGI:4413396|PMID:19653321)
PMID:21873635		 RGD PMID:19653321, PMID:21873635 MGI:4413396, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751 		JBrowse link
G Prox1 prospero homeobox 1 ISO (PMID:12692551) RGD PMID:12692551 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294 		JBrowse link
G Rbp4 retinol binding protein 4 ISO (MGI:1344892|PMID:10469643) RGD PMID:10469643 MGI:1344892 NCBI chr 1:256,806,476...256,813,678
Ensembl chr 1:256,806,472...256,813,711 		JBrowse link
establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fat1 FAT atypical cadherin 1 ISO MGI:2662293 (MGI:5766588|PMID:26114487) RGD PMID:26114487 MGI:5766588 NCBI chr16:50,372,150...50,501,716
Ensembl chr16:50,372,128...50,501,921 		JBrowse link
extraocular skeletal muscle development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1s calcium voltage-gated channel subunit alpha1 S ISO MGI:1856326 (MGI:3613415|PMID:14618389) RGD PMID:14618389 MGI:3613415 NCBI chr13:52,889,570...52,964,558
Ensembl chr13:52,889,737...52,964,155 		JBrowse link
G Foxl2 forkhead box L2 ISO (PMID:12630957) RGD PMID:12630957 NCBI chr 8:107,194,492...107,197,644
Ensembl chr 8:107,194,551...107,195,675 		JBrowse link
G Myh15 myosin, heavy chain 15 IEP RGD PMID:19948655 RGD:2317122 NCBI chr11:54,205,771...54,344,662
Ensembl chr11:54,204,775...54,344,615 		JBrowse link
G Myom1 myomesin 1 IEP RGD PMID:12878677 RGD:633368 NCBI chr 9:119,353,840...119,469,196
Ensembl chr 9:119,353,840...119,468,715 		JBrowse link
G Myom2 myomesin 2 IEP RGD PMID:12878677 RGD:633368 NCBI chr16:79,587,136...79,672,871
Ensembl chr16:79,587,640...79,671,719 		JBrowse link
G Pitx2 paired-like homeodomain 2 ISO MGI:1857844|MGI:1857846 (MGI:3624183|PMID:16638982), (MGI:4881620|PMID:21035439) RGD PMID:16638982 PMID:21035439 MGI:3624183 MGI:4881620 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129 		JBrowse link
eyelid development in camera-type eye term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egfr epidermal growth factor receptor ISO MGI:98354 (MGI:85697|PMID:9030684) RGD PMID:9030684 MGI:85697 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796 		JBrowse link
G Grhl3 grainyhead-like transcription factor 3 ISO MGI:1856837 (MGI:4947318|PMID:21262862) RGD PMID:21262862 MGI:4947318 NCBI chr 5:153,893,039...153,925,045
Ensembl chr 5:153,893,039...153,924,896 		JBrowse link
G Hdac1 histone deacetylase 1 ISO UniProtKB:P70288 (MGI:4889029|PMID:21093383) RGD PMID:21093383 MGI:4889029 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723 		JBrowse link
G Hdac2 histone deacetylase 2 ISO UniProtKB:O09106 (MGI:4889029|PMID:21093383) RGD PMID:21093383 MGI:4889029 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198 		JBrowse link
G Inhba inhibin subunit beta A ISS
ISO		 GO_REF:0000024
UniProtKB:Q04999 (MGI:2682175|PMID:14551263)		 UniProt
RGD		 PMID:14551263 GO_REF:0000024 MGI:2682175 NCBI chr17:51,894,869...51,919,998
Ensembl chr17:51,898,217...51,912,496 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO MGI:2673694 (MGI:5608927|PMID:25224220) RGD PMID:25224220 MGI:5608927 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277 		JBrowse link
G Kmt2c lysine methyltransferase 2C ISO MGI:3693319 (MGI:3692812|PMID:17021013) RGD PMID:17021013 MGI:3692812 NCBI chr 4:82,506...109,986
NCBI chr 4:6,083,650...6,294,413
Ensembl chr 4:6,083,736...6,292,516 		JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 ISO MGI:2676654 (MGI:5467663|PMID:23201579), (MGI:5608927|PMID:25224220) RGD PMID:23201579 PMID:25224220 MGI:5467663 MGI:5608927 NCBI chr 2:43,329,516...43,393,203
Ensembl chr 2:43,329,516...43,393,207 		JBrowse link
G Osr2 odd-skipped related transciption factor 2 ISS
ISO		 GO_REF:0000024
(MGI:3848564|PMID:19389375)		 UniProt
RGD		 PMID:19389375 GO_REF:0000024 MGI:3848564 NCBI chr 7:74,047,820...74,055,096
Ensembl chr 7:74,047,814...74,055,256 		JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 ISO MGI:95294 (MGI:85697|PMID:9030684) RGD PMID:9030684 MGI:85697 NCBI chr 6:3,105,443...3,182,977
Ensembl chr 6:3,104,861...3,182,996 		JBrowse link
G Sox11 SRY-box transcription factor 11 ISS
ISO		 GO_REF:0000024
(MGI:3052265|PMID:15254231)		 UniProt
RGD		 PMID:15254231 GO_REF:0000024 MGI:3052265 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983 		JBrowse link
G Srf serum response factor ISO MGI:2445832|MGI:3522206 (MGI:4421610|PMID:20047077) RGD PMID:20047077 MGI:4421610 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225 		JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 ISO
IEA		 (PMID:17273977)
GO_REF:0000107		 RGD
Ensembl		 PMID:17273977 GO_REF:0000107 NCBI chr 8:62,925,364...62,944,438
Ensembl chr 8:62,925,357...62,944,437 		JBrowse link
G Tfap2a transcription factor AP-2 alpha ISS
ISO		 GO_REF:0000024
(MGI:1313057|PMID:9811866)		 UniProt
RGD		 PMID:9811866 GO_REF:0000024 MGI:1313057 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO (PMID:17070479) RGD PMID:17070479 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214 		JBrowse link
horizontal cell localization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 ISO (MGI:3772525|PMID:18094249) RGD PMID:18094249 MGI:3772525 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293 		JBrowse link
hyaloid vascular plexus regression term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Drd2 dopamine receptor D2 ISS
ISO		 GO_REF:0000024
(MGI:6359287|PMID:30936473)		 UniProt
RGD		 PMID:30936473 GO_REF:0000024 MGI:6359287 NCBI chr 8:53,678,777...53,743,643
Ensembl chr 8:53,678,777...53,743,642 		JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 ISS
ISO		 GO_REF:0000024
(MGI:6359287|PMID:30936473)		 UniProt
RGD		 PMID:30936473 GO_REF:0000024 MGI:6359287 NCBI chr12:9,033,993...9,205,886
Ensembl chr12:9,034,308...9,205,905 		JBrowse link
G Ninj1 ninjurin 1 ISO (MGI:4940188|PMID:19557008) RGD PMID:19557008 MGI:4940188 NCBI chr17:15,866,235...15,881,284
Ensembl chr17:15,866,237...15,881,327 		JBrowse link
G Opn4 opsin 4 ISS
ISO		 GO_REF:0000024
(MGI:6359287|PMID:30936473)		 UniProt
RGD		 PMID:30936473 GO_REF:0000024 MGI:6359287 NCBI chr16:10,943,353...10,966,602
Ensembl chr16:10,943,341...10,952,549 		JBrowse link
G Opn5 opsin 5 ISO (MGI:6359287|PMID:30936473) RGD PMID:30936473 MGI:6359287 NCBI chr 9:21,045,457...21,092,517
Ensembl chr 9:21,045,457...21,093,172 		JBrowse link
G Slc17a6 solute carrier family 17 member 6 ISS
ISO		 GO_REF:0000024
(MGI:6359287|PMID:30936473)		 UniProt
RGD		 PMID:30936473 GO_REF:0000024 MGI:6359287 NCBI chr 1:106,980,463...107,038,717
Ensembl chr 1:106,998,623...107,038,704 		JBrowse link
G Slc6a3 solute carrier family 6 member 3 ISS
ISO		 GO_REF:0000024
(MGI:6359287|PMID:30936473)		 UniProt
RGD		 PMID:30936473 GO_REF:0000024 MGI:6359287 NCBI chr 1:32,323,011...32,363,983
Ensembl chr 1:32,321,580...32,363,983 		JBrowse link
G Th tyrosine hydroxylase ISS
ISO		 GO_REF:0000024
(MGI:6359287|PMID:30936473)		 UniProt
RGD		 PMID:30936473 GO_REF:0000024 MGI:6359287 NCBI chr 1:216,073,034...216,080,287
Ensembl chr 1:216,073,031...216,080,287 		JBrowse link
iris morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxe3 forkhead box E3 ISS
ISO		 PMID:17064680
(MGI:3703484|PMID:17064680)		 RGD PMID:17064680, PMID:17064680 MGI:3703484, RGD:10047226 NCBI chr 5:133,724,796...133,725,656
Ensembl chr 5:133,724,796...133,725,656 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEA
ISO		 GO_REF:0000107
MGI:103223 (MGI:5429122|PMID:22627278)		 Ensembl
RGD		 PMID:22627278 GO_REF:0000107 MGI:5429122 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 IEA
ISO		 GO_REF:0000107
(MGI:4818711|PMID:20579985)		 Ensembl
RGD		 PMID:20579985 GO_REF:0000107 MGI:4818711 NCBI chr 2:206,224,015...206,274,910
Ensembl chr 2:206,224,015...206,274,079 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (MGI:4818711|PMID:20579985) RGD PMID:20579985 MGI:4818711 NCBI chr 4:66,438,390...66,625,183
Ensembl chr 4:66,445,266...66,624,912 		JBrowse link
G Pax6 paired box 6 ISO (PMID:7550230) RGD PMID:7550230 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624 		JBrowse link
G Pitx2 paired-like homeodomain 2 ISO (PMID:9437321) RGD PMID:9437321 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO MGI:106918|MGI:2136645 (MGI:5429122|PMID:22627278) RGD PMID:22627278 MGI:5429122 NCBI chr 4:145,580,869...145,587,835
Ensembl chr 4:145,580,799...145,587,845 		JBrowse link
lens development in camera-type eye term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07033887.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr11:42,936,028...42,944,942 JBrowse link
G Birc7 baculoviral IAP repeat-containing 7 ISO MGI:3045749|MGI:5796183 (MGI:5766584|PMID:26218911) RGD PMID:26218911 MGI:5766584 NCBI chr 3:176,438,335...176,443,864
Ensembl chr 3:176,439,199...176,443,195 		JBrowse link
G Casp6 caspase 6 IEP RGD PMID:15161922 RGD:2301319 NCBI chr 2:235,341,326...235,353,715
Ensembl chr 2:235,341,365...235,353,967
Ensembl chr 2:235,341,365...235,353,967 		JBrowse link
G Cdk2 cyclin dependent kinase 2 IEP RGD PMID:10620399 RGD:724665 NCBI chr 7:3,124,953...3,132,533
Ensembl chr 7:3,124,954...3,132,457 		JBrowse link
G Cdk4 cyclin-dependent kinase 4 IEP RGD PMID:10620399 RGD:724665 NCBI chr 7:70,345,971...70,352,689
Ensembl chr 7:70,349,863...70,352,418 		JBrowse link
G Cdon cell adhesion associated, oncogene regulated IEA
ISO		 GO_REF:0000107
MGI:2653120 (MGI:4422144|PMID:19754878)		 Ensembl
RGD		 PMID:19754878 GO_REF:0000107 MGI:4422144 NCBI chr 8:36,625,757...36,712,091
Ensembl chr 8:36,625,733...36,710,949 		JBrowse link
G Cryaa crystallin, alpha A IEP
ISO		 MGI:1858025|MGI:2653028|MGI:88516 (MGI:2154010|PMID:11687536), (MGI:3617146|PMID:16439475), (MGI:85598|PMID:9023351) RGD PMID:9023351 PMID:11687536 PMID:16439475, PMID:8187157 MGI:2154010 MGI:3617146 MGI:85598, RGD:1600991 NCBI chr20:10,438,444...10,442,189
Ensembl chr20:10,438,444...10,442,187 		JBrowse link
G Cryab crystallin, alpha B ISO MGI:88515 (MGI:3617146|PMID:16439475) RGD PMID:16439475 MGI:3617146 NCBI chr 8:55,178,543...55,182,546
Ensembl chr 8:55,178,289...55,182,545 		JBrowse link
G Cryba1 crystallin, beta A1 IEP
IBA		 PMID:21873635 RGD
GO_Central		 PMID:2753045, PMID:21873635 RGD:1298814, RGD:13792537 NCBI chr10:65,160,777...65,167,504
Ensembl chr10:65,161,152...65,167,494 		JBrowse link
G Cryba2 crystallin, beta A2 ISO
IBA		 MGI:4950379 (MGI:4950336|PMID:21212184)
PMID:21873635		 RGD PMID:21212184, PMID:21873635 MGI:4950336, RGD:13792537 NCBI chr 9:82,151,056...82,154,266
Ensembl chr 9:82,151,057...82,154,266 		JBrowse link
G Cryba4 crystallin, beta A4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:50,407,843...50,414,434
Ensembl chr12:50,407,843...50,414,432 		JBrowse link
G Crybb1 crystallin, beta B1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:50,390,939...50,404,550
Ensembl chr12:50,390,940...50,404,550 		JBrowse link
G Crybb2 crystallin, beta B2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:49,577,580...49,588,555
Ensembl chr12:49,578,633...49,588,555 		JBrowse link
G Crybb3 crystallin, beta B3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:49,564,991...49,571,008
Ensembl chr12:49,565,992...49,571,006 		JBrowse link
G Crybg3 crystallin beta-gamma domain containing 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:42,895,610...43,006,568
Ensembl chr11:42,945,084...43,005,097 		JBrowse link
G Cryga crystallin, gamma A IEP
IBA
ISO		 PMID:21873635
MGI:1856493|MGI:1857595 (MGI:1333159|PMID:6510713), (MGI:65639|PMID:8034315), (MGI:69851|PMID:6877261), (MGI:71783|PMID:7088001)		 RGD PMID:6510713 PMID:6877261 PMID:7088001 PMID:8034315, PMID:2338125, PMID:21873635 MGI:1333159 MGI:65639 MGI:69851 MGI:71783, RGD:2303725, RGD:13792537 NCBI chr 9:71,828,308...71,855,900
Ensembl chr 9:71,835,883...71,852,113
Ensembl chr 9:71,835,883...71,852,113 		JBrowse link
G Crygb crystallin, gamma B IEP
IBA
ISO		 PMID:21873635
MGI:1857597|MGI:3777015 (MGI:3691890|PMID:12426373), (MGI:3776178|PMID:18172107), (MGI:81294|PMID:8626090)		 RGD PMID:8626090 PMID:12426373 PMID:18172107, PMID:2338125, PMID:21873635 MGI:3691890 MGI:3776178 MGI:81294, RGD:2303725, RGD:13792537 NCBI chr 9:71,796,204...71,798,265
Ensembl chr 9:71,796,204...71,798,265 		JBrowse link
G Crygc crystallin, gamma C IEP
IBA		 PMID:21873635 RGD
GO_Central		 PMID:2338125, PMID:21873635 RGD:2303725, RGD:13792537 NCBI chr 9:71,786,246...71,788,281
Ensembl chr 9:71,786,248...71,788,281 		JBrowse link
G Crygd crystallin, gamma D IEP
IBA
ISO		 PMID:21873635
MGI:1858026|MGI:3762620 (MGI:1354024|PMID:10704279), (MGI:3762268|PMID:17652744)		 RGD PMID:10704279 PMID:17652744, PMID:2338125, PMID:21873635 MGI:1354024 MGI:3762268, RGD:2303725, RGD:13792537 NCBI chr 9:71,776,568...71,778,323
Ensembl chr 9:71,764,318...71,778,323 		JBrowse link
G Cryge crystallin, gamma E IEP
IBA		 PMID:21873635 RGD
GO_Central		 PMID:2338125, PMID:21873635 RGD:2303725, RGD:13792537 NCBI chr 9:71,764,317...71,767,045 JBrowse link
G Crygf crystallin, gamma F IEP
IBA		 PMID:21873635 RGD
GO_Central		 PMID:2338125, PMID:21873635 RGD:2303725, RGD:13792537 NCBI chr 9:72,933,304...72,935,468
Ensembl chr 9:72,933,304...72,935,468 		JBrowse link
G Crygn crystallin, gamma N IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:6,900,811...6,909,167
Ensembl chr 4:6,903,198...6,909,167 		JBrowse link
G Crygs crystallin, gamma S ISO
IBA		 MGI:1861635 (MGI:65639|PMID:8034315), (MGI:69851|PMID:6877261)
PMID:21873635		 RGD PMID:6877261 PMID:8034315, PMID:21873635 MGI:65639 MGI:69851, RGD:13792537 NCBI chr11:81,796,891...81,802,172
Ensembl chr11:81,796,891...81,802,172 		JBrowse link
G Ctns cystinosin, lysosomal cystine transporter ISO MGI:2388945 (MGI:5302597|PMID:21897743) RGD PMID:21897743 MGI:5302597 NCBI chr10:59,749,250...59,772,475
Ensembl chr10:59,749,256...59,764,868 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 IEA
ISO		 GO_REF:0000107
MGI:2680670 (MGI:2682188|PMID:14645510)		 Ensembl
RGD		 PMID:14645510 GO_REF:0000107 MGI:2682188 NCBI chr11:72,164,566...72,378,895
Ensembl chr11:72,163,749...72,378,895 		JBrowse link
G Fat1 FAT atypical cadherin 1 ISO MGI:2662293 (MGI:5766588|PMID:26114487) RGD PMID:26114487 MGI:5766588 NCBI chr16:50,372,150...50,501,716
Ensembl chr16:50,372,128...50,501,921 		JBrowse link
G Foxe3 forkhead box E3 ISO
ISS		 (PMID:27218149)
(MGI:3703484|PMID:17064680)
GO_REF:0000024		 RGD
UniProt		 PMID:17064680 PMID:27218149, PMID:17064680 GO_REF:0000024 MGI:3703484, RGD:10047226 NCBI chr 5:133,724,796...133,725,656
Ensembl chr 5:133,724,796...133,725,656 		JBrowse link
G Frs2 fibroblast growth factor receptor substrate 2 ISO MGI:3045749|MGI:3768912 (MGI:5447585|PMID:23136392) RGD PMID:23136392 MGI:5447585 NCBI chr 7:60,128,506...60,210,482
Ensembl chr 7:60,128,508...60,210,518 		JBrowse link
G Gata3 GATA binding protein 3 ISO MGI:2181200 (MGI:4354418|PMID:19623612) RGD PMID:19623612 MGI:4354418 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681 		JBrowse link
G Gja1 gap junction protein, alpha 1 ISO MGI:1857177 (MGI:1267300|PMID:9620080) RGD PMID:9620080 MGI:1267300 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089 		JBrowse link
G Gja8 gap junction protein, alpha 8 ISO MGI:1857499 (MGI:69851|PMID:6877261) RGD PMID:6877261 MGI:69851 NCBI chr 2:199,050,854...199,052,470
Ensembl chr 2:199,050,854...199,052,470 		JBrowse link
G Gje1 gap junction protein, epsilon 1 ISO MGI:3529958 (MGI:3795311|PMID:18385072) RGD PMID:18385072 MGI:3795311 NCBI chr 1:8,883,767...8,887,721
Ensembl chr 1:8,883,961...8,885,967 		JBrowse link
G Lim2 lens intrinsic membrane protein 2 ISO MGI:1862040 (MGI:1333159|PMID:6510713), (MGI:69851|PMID:6877261), (MGI:71783|PMID:7088001), (MGI:82332|PMID:8812411) RGD PMID:6510713 PMID:6877261 PMID:7088001 PMID:8812411 MGI:1333159 MGI:69851 MGI:71783 MGI:82332 NCBI chr 1:98,495,082...98,501,248
Ensembl chr 1:98,495,082...98,501,249 		JBrowse link
G Maf MAF bZIP transcription factor ISO MGI:2148635|MGI:2148636|MGI:2148637 (MGI:1340085|PMID:10383433), (MGI:1350584|PMID:10603348), (MGI:3760711|PMID:12835653) RGD PMID:10383433 PMID:10603348 PMID:12835653 MGI:1340085 MGI:1350584 MGI:3760711 NCBI chr19:48,179,826...48,200,995
Ensembl chr19:48,194,804...48,196,748 		JBrowse link
G Med1 mediator complex subunit 1 ISS
ISO		 GO_REF:0000024
(MGI:2158098|PMID:11724781)		 UniProt
RGD		 PMID:11724781 GO_REF:0000024 MGI:2158098 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880 		JBrowse link
G Mip major intrinsic protein of lens fiber IEA
ISO		 GO_REF:0000107
MGI:1857105 (MGI:55175|PMID:7333462)		 Ensembl
RGD		 PMID:7333462 GO_REF:0000107 MGI:55175 NCBI chr 7:2,635,743...2,642,995
Ensembl chr 7:2,635,743...2,642,848 		JBrowse link
G Nhs NHS actin remodeling regulator ISO
IBA		 MGI:1861111 (MGI:64544|PMID:8282045)
PMID:21873635		 RGD PMID:8282045, PMID:21873635 MGI:64544, RGD:13792537 NCBI chr  X:34,312,102...34,675,912
Ensembl chr  X:34,623,405...34,673,742 		JBrowse link
G Pax6 paired box 6 IEA
ISO		 GO_REF:0000107
MGI:2156742 (MGI:69851|PMID:6877261)		 Ensembl
RGD		 PMID:6877261 GO_REF:0000107 MGI:69851 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624 		JBrowse link
G Pds5a PDS5 cohesin associated factor A ISO MGI:3722688 (MGI:3847057|PMID:19412548) RGD PMID:19412548 MGI:3847057 NCBI chr14:44,185,445...44,282,308
Ensembl chr14:44,185,446...44,280,079 		JBrowse link
G Pds5b PDS5 cohesin associated factor B ISO MGI:3722688 (MGI:3847057|PMID:19412548) RGD PMID:19412548 MGI:3847057 NCBI chr12:659,995...794,042
Ensembl chr12:660,011...794,042 		JBrowse link
G Pitx3 paired-like homeodomain 3 ISS
ISO		 GO_REF:0000024
(MGI:3831639|PMID:19007884), (MGI:4353482|PMID:19334279)		 UniProt
RGD		 PMID:19007884 PMID:19334279 GO_REF:0000024 MGI:3831639 MGI:4353482 NCBI chr 1:265,886,766...265,899,947
Ensembl chr 1:265,887,230...265,899,958 		JBrowse link
G Prox1 prospero homeobox 1 ISO (PMID:8812486) RGD PMID:8812486 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294 		JBrowse link
G Pygo2 pygopus family PHD finger 2 ISO MGI:3712856 (MGI:3712628|PMID:17425782) RGD PMID:17425782 MGI:3712628 NCBI chr 2:188,757,167...188,762,285
Ensembl chr 2:188,757,489...188,762,282 		JBrowse link
G Six3 SIX homeobox 3 ISO (MGI:1929788|PMID:11139622) RGD PMID:11139622 MGI:1929788 NCBI chr 6:8,886,730...8,891,094
Ensembl chr 6:8,886,591...8,889,925 		JBrowse link
G Six5 SIX homeobox 5 ISO MGI:2148689|MGI:2148692 (MGI:1855730|PMID:10802668), (MGI:1855731|PMID:10802667) RGD PMID:10802667 PMID:10802668 MGI:1855730 MGI:1855731 NCBI chr 1:80,000,106...80,005,303
Ensembl chr 1:80,000,165...80,003,232 		JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 ISO MGI:4417931 (MGI:5513052|PMID:23543054) RGD PMID:23543054 MGI:5513052 NCBI chr15:95,507,632...95,514,259
Ensembl chr15:95,507,640...95,514,259 		JBrowse link
G Tbc1d20 TBC1 domain family, member 20 ISO MGI:1856684 (MGI:5551670|PMID:24239381) RGD PMID:24239381 MGI:5551670 NCBI chr 3:147,772,006...147,790,946
Ensembl chr 3:147,772,165...147,789,158 		JBrowse link
G Tbc1d32 TBC1 domain family, member 32 ISO MGI:4440463 (MGI:4439200|PMID:20159594) RGD PMID:20159594 MGI:4439200 NCBI chr20:37,463,879...37,701,268
Ensembl chr20:37,465,278...37,700,937 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 ISO (MGI:2151112|PMID:11641223) RGD PMID:11641223 MGI:2151112 NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 ISO (MGI:2151112|PMID:11641223) RGD PMID:11641223 MGI:2151112 NCBI chr 8:124,310,288...124,399,345
Ensembl chr 8:124,312,754...124,399,494 		JBrowse link
lens fiber cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bfsp1 beaded filament structural protein 1 IEA
IBA
ISO		 GO_REF:0000107
PMID:21873635
(MGI:2673300|PMID:15037121)		 Ensembl
RGD		 PMID:15037121, PMID:21873635 GO_REF:0000107 MGI:2673300, RGD:13792537 NCBI chr 3:137,935,345...137,992,652
Ensembl chr 3:137,935,345...137,969,658 		JBrowse link
G Bfsp2 beaded filament structural protein 2 ISO MGI:2671074 (MGI:2673300|PMID:15037121), (MGI:3717045|PMID:17065509) RGD PMID:15037121 PMID:17065509 MGI:2673300 MGI:3717045 NCBI chr 8:111,908,614...111,965,889
Ensembl chr 8:111,908,614...111,965,889 		JBrowse link
G Crygb crystallin, gamma B ISO MGI:3777015 (MGI:3776178|PMID:18172107) RGD PMID:18172107 MGI:3776178 NCBI chr 9:71,796,204...71,798,265
Ensembl chr 9:71,796,204...71,798,265 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:3044679|MGI:3045749|MGI:95524 (MGI:3796810|PMID:18455718), (MGI:5447585|PMID:23136392) RGD PMID:18455718 PMID:23136392 MGI:3796810 MGI:5447585 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO MGI:95523 (MGI:3796810|PMID:18455718) RGD PMID:18455718 MGI:3796810 NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706 		JBrowse link
G Frs2 fibroblast growth factor receptor substrate 2 ISO MGI:3045749|MGI:3768912|MGI:97385 (MGI:5447585|PMID:23136392) RGD PMID:23136392 MGI:5447585 NCBI chr 7:60,128,506...60,210,482
Ensembl chr 7:60,128,508...60,210,518 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO MGI:2386105 (MGI:4888440|PMID:21118511) RGD PMID:21118511 MGI:4888440 NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468 		JBrowse link
G Tmod1 tropomodulin 1 IEA
ISO		 GO_REF:0000107
UniProtKB:Q6NVD9 (MGI:5475090|PMID:23144950)		 Ensembl
RGD		 PMID:23144950 GO_REF:0000107 MGI:5475090 NCBI chr 5:61,635,244...61,712,052
Ensembl chr 5:61,657,507...61,712,051 		JBrowse link
G Vim vimentin IEA
ISO		 GO_REF:0000107
(MGI:2673300|PMID:15037121)		 Ensembl
RGD		 PMID:15037121 GO_REF:0000107 MGI:2673300 NCBI chr17:80,882,715...80,891,200
Ensembl chr17:80,882,666...80,891,212 		JBrowse link
lens fiber cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crygd crystallin, gamma D IDA
ISO		 MGI:3762620 (MGI:3762268|PMID:17652744) RGD PMID:17652744, PMID:8575616 MGI:3762268, RGD:1601018 NCBI chr 9:71,776,568...71,778,323
Ensembl chr 9:71,764,318...71,778,323 		JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 ISO (MGI:3720408|PMID:17215516) RGD PMID:17215516 MGI:3720408 NCBI chr 7:11,201,690...11,213,614
Ensembl chr 7:11,201,690...11,213,613 		JBrowse link
G Kdm5b lysine demethylase 5B IEP RGD PMID:24142921 RGD:9587771 NCBI chr13:51,384,371...51,455,392
Ensembl chr13:51,384,389...51,455,357 		JBrowse link
G Maf MAF bZIP transcription factor ISO
IEA
IBA		 MGI:2148636|MGI:2148637 (MGI:1340085|PMID:10383433), (MGI:3760711|PMID:12835653)
GO_REF:0000107
PMID:21873635		 RGD
Ensembl		 PMID:10383433 PMID:12835653, PMID:21873635 GO_REF:0000107 MGI:1340085 MGI:3760711, RGD:13792537 NCBI chr19:48,179,826...48,200,995
Ensembl chr19:48,194,804...48,196,748 		JBrowse link
G Nf2 neurofibromin 2 IEA
ISO		 GO_REF:0000107
(MGI:4457460|PMID:20181838)		 Ensembl
RGD		 PMID:20181838 GO_REF:0000107 MGI:4457460 NCBI chr14:84,996,905...85,088,547
Ensembl chr14:84,996,905...85,088,523 		JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 ISO MGI:1100860 (MGI:5447585|PMID:23136392) RGD PMID:23136392 MGI:5447585 NCBI chr 1:139,890,537...140,262,503
Ensembl chr 1:139,890,560...140,262,503 		JBrowse link
G Pitx3 paired-like homeodomain 3 ISO (MGI:3831639|PMID:19007884) RGD PMID:19007884 MGI:3831639 NCBI chr 1:265,886,766...265,899,947
Ensembl chr 1:265,887,230...265,899,958 		JBrowse link
G Six3 SIX homeobox 3 ISO (MGI:2181466|PMID:12072567) RGD PMID:12072567 MGI:2181466 NCBI chr 6:8,886,730...8,891,094
Ensembl chr 6:8,886,591...8,889,925 		JBrowse link
G Skil SKI-like proto-oncogene ISO (MGI:3720408|PMID:17215516) RGD PMID:17215516 MGI:3720408 NCBI chr 2:115,862,932...115,891,304
Ensembl chr 2:115,866,701...115,891,097 		JBrowse link
G Slc7a11 solute carrier family 7 member 11 IEP RGD PMID:16043861 RGD:2315033 NCBI chr 2:139,453,774...139,528,479
Ensembl chr 2:139,453,774...139,528,162 		JBrowse link
G Smad3 SMAD family member 3 ISO (MGI:3720408|PMID:17215516) RGD PMID:17215516 MGI:3720408 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349 		JBrowse link
G Tdrd7 tudor domain containing 7 ISO
ISS		 (PMID:21436445)
(MGI:4943339|PMID:21436445)
GO_REF:0000024		 RGD
UniProt		 PMID:21436445 GO_REF:0000024 MGI:4943339 NCBI chr 5:61,557,909...61,631,719
Ensembl chr 5:61,564,864...61,631,710 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO (MGI:3720408|PMID:17215516) RGD PMID:17215516 MGI:3720408 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199 		JBrowse link
lens fiber cell morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl-interactor 2 ISO (MGI:3525751|PMID:15572692) RGD PMID:15572692 MGI:3525751 NCBI chr 9:67,234,612...67,284,504
Ensembl chr 9:67,234,303...67,282,600 		JBrowse link
G Atf4 activating transcription factor 4 ISS
ISO		 GO_REF:0000024
(MGI:1339872|PMID:10096021), (MGI:1859108|PMID:10885750), (MGI:2158533|PMID:11806972)		 UniProt
RGD		 PMID:10096021 PMID:10885750 PMID:11806972 GO_REF:0000024 MGI:1339872 MGI:1859108 MGI:2158533 NCBI chr 7:121,480,723...121,482,781
Ensembl chr 7:121,480,723...121,482,772 		JBrowse link
G Cryaa crystallin, alpha A ISO MGI:3665275|MGI:3777403 (MGI:3655912|PMID:16799046), (MGI:3775669|PMID:18056999) RGD PMID:16799046 PMID:18056999 MGI:3655912 MGI:3775669 NCBI chr20:10,438,444...10,442,189
Ensembl chr20:10,438,444...10,442,187 		JBrowse link
G Crygb crystallin, gamma B ISO MGI:1857597 (MGI:3691890|PMID:12426373), (MGI:81294|PMID:8626090) RGD PMID:8626090 PMID:12426373 MGI:3691890 MGI:81294 NCBI chr 9:71,796,204...71,798,265
Ensembl chr 9:71,796,204...71,798,265 		JBrowse link
G Epha2 Eph receptor A2 ISO (MGI:3831440|PMID:18948590) RGD PMID:18948590 MGI:3831440 NCBI chr 5:159,845,773...159,874,203
Ensembl chr 5:159,845,774...159,874,206 		JBrowse link
G Prox1 prospero homeobox 1 ISO (PMID:11850194)
(MGI:1332720|PMID:10080188)		 RGD PMID:10080188 PMID:11850194 MGI:1332720 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294 		JBrowse link
G Tbc1d20 TBC1 domain family, member 20 ISO MGI:1856684 (MGI:5551670|PMID:24239381) RGD PMID:24239381 MGI:5551670 NCBI chr 3:147,772,006...147,790,946
Ensembl chr 3:147,772,165...147,789,158 		JBrowse link
lens induction in camera-type eye term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISO		 GO_REF:0000107
MGI:1857137 (MGI:1316914|PMID:9851982)		 Ensembl
RGD		 PMID:9851982 GO_REF:0000107 MGI:1316914 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 IEA
ISO		 GO_REF:0000107
(MGI:4818711|PMID:20579985)		 Ensembl
RGD		 PMID:20579985 GO_REF:0000107 MGI:4818711 NCBI chr 2:206,224,015...206,274,910
Ensembl chr 2:206,224,015...206,274,079 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (MGI:4818711|PMID:20579985) RGD PMID:20579985 MGI:4818711 NCBI chr 4:66,438,390...66,625,183
Ensembl chr 4:66,445,266...66,624,912 		JBrowse link
G Pou2f1 POU class 2 homeobox 1 ISO MGI:98364 (MGI:3701404|PMID:17140559) RGD PMID:17140559 MGI:3701404 NCBI chr13:84,075,316...84,217,368
Ensembl chr13:84,083,632...84,217,366 		JBrowse link
G Six3 SIX homeobox 3 ISO MGI:3693322 (MGI:3692850|PMID:17066077) RGD PMID:17066077 MGI:3692850 NCBI chr 6:8,886,730...8,891,094
Ensembl chr 6:8,886,591...8,889,925 		JBrowse link
G Sox2 SRY-box transcription factor 2 ISO MGI:101898 (MGI:3701404|PMID:17140559) RGD PMID:17140559 MGI:3701404 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545 		JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO MGI:1888387 (MGI:1347707|PMID:10571739) RGD PMID:10571739 MGI:1347707 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457 		JBrowse link
lens morphogenesis in camera-type eye term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcar3 BCAR3 adaptor protein, NSP family member ISO MGI:4359826 (MGI:4358852|PMID:19365570) RGD PMID:19365570 MGI:4358852 NCBI chr 2:226,563,050...226,679,449
Ensembl chr 2:226,563,050...226,679,438 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 ISO MGI:3045749|MGI:3696062 (MGI:3807101|PMID:18653562) RGD PMID:18653562 MGI:3807101 NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786 		JBrowse link
G Cryaa crystallin, alpha A ISO MGI:1858023|MGI:3665274|MGI:3665275 (MGI:3655912|PMID:16799046), (MGI:82388|PMID:8812430) RGD PMID:8812430 PMID:16799046 MGI:3655912 MGI:82388 NCBI chr20:10,438,444...10,442,189
Ensembl chr20:10,438,444...10,442,187 		JBrowse link
G Ctnnb1 catenin beta 1 IEA
ISO		 GO_REF:0000107
MGI:2148567|MGI:3045749 (MGI:3603687|PMID:16102745)		 Ensembl
RGD		 PMID:16102745 GO_REF:0000107 MGI:3603687 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO (MGI:1933072|PMID:11290300) RGD PMID:11290300 MGI:1933072 NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706 		JBrowse link
G Lctl lactase-like ISO (MGI:6274960|PMID:29425878) RGD PMID:29425878 MGI:6274960 NCBI chr 8:69,070,340...69,090,405
Ensembl chr 8:69,070,994...69,086,992 		JBrowse link
G Meis1 Meis homeobox 1 ISO MGI:3029063 (MGI:3028436|PMID:14713950) RGD PMID:14713950 MGI:3028436 NCBI chr14:103,182,178...103,321,809
Ensembl chr14:103,181,281...103,321,270 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 ISO MGI:3605480 (MGI:3604842|PMID:15728677) RGD PMID:15728677 MGI:3604842 NCBI chr 8:48,094,233...48,198,499
Ensembl chr 8:48,094,673...48,157,305 		JBrowse link
G Nectin3 nectin cell adhesion molecule 3 ISO MGI:3605481 (MGI:3604842|PMID:15728677) RGD PMID:15728677 MGI:3604842 NCBI chr11:57,897,879...57,995,193
Ensembl chr11:57,897,879...57,993,548 		JBrowse link
G Pitx3 paired-like homeodomain 3 ISS
ISO		 GO_REF:0000024
(MGI:4353482|PMID:19334279)		 UniProt
RGD		 PMID:19334279 GO_REF:0000024 MGI:4353482 NCBI chr 1:265,886,766...265,899,947
Ensembl chr 1:265,887,230...265,899,958 		JBrowse link
G Prox1 prospero homeobox 1 ISO (MGI:1332720|PMID:10080188) RGD PMID:10080188 MGI:1332720 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294 		JBrowse link
G Ski SKI proto-oncogene ISO MGI:2177555 (MGI:3693412|PMID:17003410) RGD PMID:17003410 MGI:3693412 NCBI chr 5:172,556,196...172,623,878
Ensembl chr 5:172,559,135...172,623,899 		JBrowse link
G Sox1 SRY-box transcription factor 1 ISO MGI:2137412 (MGI:1201714|PMID:9512512) RGD PMID:9512512 MGI:1201714
G Sox11 SRY-box transcription factor 11 ISS
ISO		 GO_REF:0000024
(MGI:3797299|PMID:18423449)		 UniProt
RGD		 PMID:18423449 GO_REF:0000024 MGI:3797299 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983 		JBrowse link
G Tdrd7 tudor domain containing 7 ISO
ISS		 (PMID:21436445)
(MGI:4943339|PMID:21436445)
GO_REF:0000024		 RGD
UniProt		 PMID:21436445 GO_REF:0000024 MGI:4943339 NCBI chr 5:61,557,909...61,631,719
Ensembl chr 5:61,564,864...61,631,710 		JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO MGI:2176682 (MGI:1329246|PMID:9918694), (MGI:3774683|PMID:18224708) RGD PMID:9918694 PMID:18224708 MGI:1329246 MGI:3774683 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457 		JBrowse link
negative regulation of amacrine cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casz1 castor zinc finger 1 ISO MGI:3052661|MGI:4841554 (MGI:5629913|PMID:25654255) RGD PMID:25654255 MGI:5629913 NCBI chr 5:165,625,119...165,777,053
Ensembl chr 5:165,724,027...165,774,616 		JBrowse link
G Pou4f2 POU class 4 homeobox 2 ISS
ISO		 GO_REF:0000024
(MGI:5316576|PMID:21875655)		 UniProt
RGD		 PMID:21875655 GO_REF:0000024 MGI:5316576 NCBI chr19:33,160,180...33,163,821
Ensembl chr19:33,160,180...33,163,821 		JBrowse link
negative regulation of lens fiber cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxe3 forkhead box E3 ISS
ISO		 PMID:16199865
(MGI:1352262|PMID:10652278), (MGI:1861492|PMID:10890982), (MGI:3603877|PMID:16199865)		 RGD PMID:10652278 PMID:10890982 PMID:16199865, PMID:16199865 MGI:1352262 MGI:1861492 MGI:3603877, RGD:10047273 NCBI chr 5:133,724,796...133,725,656
Ensembl chr 5:133,724,796...133,725,656 		JBrowse link
G Spred1 sprouty-related, EVH1 domain containing 1 ISO (MGI:6414698|PMID:29501879) RGD PMID:29501879 MGI:6414698 NCBI chr 3:108,795,337...108,861,650
Ensembl chr 3:108,795,235...108,857,556 		JBrowse link
G Spred2 sprouty-related, EVH1 domain containing 2 ISS
ISO		 GO_REF:0000024
(MGI:6414698|PMID:29501879)		 UniProt
RGD		 PMID:29501879 GO_REF:0000024 MGI:6414698 NCBI chr14:104,268,362...104,290,206
Ensembl chr14:104,191,517...104,290,456 		JBrowse link
G Spred3 sprouty-related, EVH1 domain containing 3 ISO (MGI:6414698|PMID:29501879) RGD PMID:29501879 MGI:6414698 NCBI chr 1:88,101,213...88,112,719
Ensembl chr 1:88,103,719...88,112,683 		JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 ISO (MGI:6414698|PMID:29501879) RGD PMID:29501879 MGI:6414698 NCBI chr 2:124,400,689...124,405,331
Ensembl chr 2:124,400,679...124,405,331 		JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 ISO (MGI:6414698|PMID:29501879) RGD PMID:29501879 MGI:6414698 NCBI chr15:90,172,769...90,177,823
Ensembl chr15:90,172,975...90,175,802 		JBrowse link
negative regulation of retinal cone cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casz1 castor zinc finger 1 ISO MGI:3052661|MGI:4841554 (MGI:5629913|PMID:25654255) RGD PMID:25654255 MGI:5629913 NCBI chr 5:165,625,119...165,777,053
Ensembl chr 5:165,724,027...165,774,616 		JBrowse link
negative regulation of vasculature development involved in avascular cornea development in camera-type eye term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angptl7 angiopoietin like 7 ISO (PMID:25622036) RGD PMID:25622036 NCBI chr 5:165,311,794...165,318,361
Ensembl chr 5:165,312,130...165,316,652 		JBrowse link
neural retina development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl6a actin-like 6A ISO (PMID:18816825) RGD PMID:18816825 NCBI chr 2:119,112,776...119,128,870
Ensembl chr 2:119,112,513...119,129,751 		JBrowse link
G Atoh7 atonal bHLH transcription factor 7 ISO (PMID:21441919)
MGI:2159015 (MGI:5288596|PMID:21441919)		 RGD PMID:21441919 MGI:5288596 NCBI chr20:27,082,961...27,083,410
Ensembl chr20:27,082,961...27,083,410 		JBrowse link
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 IEP RGD PMID:16079002 RGD:2317729 NCBI chr 7:41,114,606...41,223,138
Ensembl chr 7:41,114,697...41,220,579 		JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 IEP RGD PMID:16079002 RGD:2317729 NCBI chr 4:145,704,779...145,948,997
Ensembl chr 4:145,703,046...146,016,325 		JBrowse link
G Atp2b3 ATPase plasma membrane Ca2+ transporting 3 IEP RGD PMID:16079002 RGD:2317729 NCBI chr  X:157,236,400...157,312,028
Ensembl chr  X:157,239,306...157,312,028 		JBrowse link
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 IEP RGD PMID:16079002 RGD:2317729 NCBI chr13:50,091,644...50,153,808
Ensembl chr13:50,091,430...50,153,823 		JBrowse link
G Bsg basigin (Ok blood group) ISS
ISO		 GO_REF:0000024
(MGI:1888850|PMID:10967074), (MGI:1932603|PMID:11273674), (MGI:3610672|PMID:11853760)		 UniProt
RGD		 PMID:10967074 PMID:11273674 PMID:11853760 GO_REF:0000024 MGI:1888850 MGI:1932603 MGI:3610672 NCBI chr 7:12,875,536...12,882,753
Ensembl chr 7:12,875,537...12,882,753 		JBrowse link
G Casp2 caspase 2 IEP RGD PMID:9809666 RGD:4107085 NCBI chr 4:71,652,358...71,670,228
Ensembl chr 4:71,652,354...71,670,239 		JBrowse link
G Gpm6a glycoprotein m6a ISS
ISO		 GO_REF:0000024
(MGI:3811956|PMID:18776950)		 UniProt
RGD		 PMID:18776950 GO_REF:0000024 MGI:3811956 NCBI chr16:39,367,697...39,719,292
Ensembl chr16:39,367,692...39,719,187 		JBrowse link
G Optn optineurin IEP RGD PMID:17687037 RGD:7800681 NCBI chr17:77,167,700...77,218,374
Ensembl chr17:77,167,740...77,218,389 		JBrowse link
G Psen1 presenilin 1 IEP RGD PMID:12401445 RGD:729595 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798 		JBrowse link
G Rab11fip4 RAB11 family interacting protein 4 ISO (MGI:3694624|PMID:17089410) RGD PMID:17089410 MGI:3694624 NCBI chr10:66,942,363...67,051,672
Ensembl chr10:66,942,398...67,048,308 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 IDA RGD PMID:2631392 RGD:9585660 NCBI chr 2:266,141,581...266,169,197
Ensembl chr 2:266,141,581...266,169,197 		JBrowse link
G Slc17a6 solute carrier family 17 member 6 IEP RGD PMID:18482716 RGD:9999162 NCBI chr 1:106,980,463...107,038,717
Ensembl chr 1:106,998,623...107,038,704 		JBrowse link
G Slc17a7 solute carrier family 17 member 7 IEP RGD PMID:18482716 RGD:9999162 NCBI chr 1:101,161,265...101,172,292
Ensembl chr 1:101,161,252...101,173,174 		JBrowse link
G Slc17a8 solute carrier family 17 member 8 IEP RGD PMID:18482716 RGD:9999162 NCBI chr 7:30,215,231...30,274,993
Ensembl chr 7:30,216,104...30,274,984 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO (PMID:18816825) RGD PMID:18816825 NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468 		JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 ISO (PMID:18816825) RGD PMID:18816825 NCBI chr 4:7,076,710...7,108,334
Ensembl chr 4:7,076,759...7,108,328 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 ISO (MGI:894212|PMID:9217007) RGD PMID:9217007 MGI:894212 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030 		JBrowse link
optic cup formation involved in camera-type eye development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A ISO MGI:5469314 (MGI:5466629|PMID:23129809) RGD PMID:23129809 MGI:5466629 NCBI chr 5:151,904,687...151,977,973
Ensembl chr 5:151,904,684...151,977,636 		JBrowse link
optic cup morphogenesis involved in camera-type eye development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 IEA
ISO		 GO_REF:0000107
MGI:1861722 (MGI:3624188|PMID:16611695)		 Ensembl
RGD		 PMID:16611695 GO_REF:0000107 MGI:3624188 NCBI chr 1:238,222,689...238,264,381
Ensembl chr 1:238,222,521...238,264,330 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 IEA
ISO		 GO_REF:0000107
MGI:1353450 (MGI:3624188|PMID:16611695)		 Ensembl
RGD		 PMID:16611695 GO_REF:0000107 MGI:3624188 NCBI chr 1:127,302,920...127,337,828
Ensembl chr 1:127,301,128...127,337,882 		JBrowse link
G Pax2 paired box 2 ISS
ISO		 GO_REF:0000024
(MGI:84247|PMID:8951055)		 UniProt
RGD		 PMID:8951055 GO_REF:0000024 MGI:84247 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329 		JBrowse link
optic cup structural organization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tfap2a transcription factor AP-2 alpha ISS
ISO		 GO_REF:0000024
(MGI:4439459|PMID:20150232)		 UniProt
RGD		 PMID:20150232 GO_REF:0000024 MGI:4439459 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457 		JBrowse link
optic placode formation involved in camera-type eye formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frs2 fibroblast growth factor receptor substrate 2 ISO MGI:3521833 (MGI:3513737|PMID:15569927) RGD PMID:15569927 MGI:3513737 NCBI chr 7:60,128,506...60,210,482
Ensembl chr 7:60,128,508...60,210,518 		JBrowse link
G Prox1 prospero homeobox 1 ISO (PMID:11850194) RGD PMID:11850194 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294 		JBrowse link
optic vesicle morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six3 SIX homeobox 3 ISO (MGI:2136715|PMID:11458394) RGD PMID:11458394 MGI:2136715 NCBI chr 6:8,886,730...8,891,094
Ensembl chr 6:8,886,591...8,889,925 		JBrowse link
G Tfap2a transcription factor AP-2 alpha ISS
ISO		 GO_REF:0000024
(MGI:4439459|PMID:20150232)		 UniProt
RGD		 PMID:20150232 GO_REF:0000024 MGI:4439459 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457 		JBrowse link
positive regulation of amacrine cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx1 distal-less homeobox 1 IEA
ISO
ISS		 GO_REF:0000107
(MGI:5316576|PMID:21875655)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:21875655 GO_REF:0000024 GO_REF:0000107 MGI:5316576 NCBI chr 3:58,164,931...58,169,521
Ensembl chr 3:58,164,931...58,169,521 		JBrowse link
G Dlx2 distal-less homeobox 2 IEA
ISO
ISS		 GO_REF:0000107
(MGI:5316576|PMID:21875655)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:21875655 GO_REF:0000024 GO_REF:0000107 MGI:5316576 NCBI chr 3:58,180,088...58,181,971
Ensembl chr 3:58,180,088...58,181,971 		JBrowse link
positive regulation of lens epithelial cell proliferation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxe3 forkhead box E3 ISO
ISS		 (PMID:22527307)
PMID:16199865
(MGI:1352262|PMID:10652278), (MGI:3603877|PMID:16199865)		 RGD PMID:10652278 PMID:16199865 PMID:22527307, PMID:16199865, PMID:22527307 MGI:1352262 MGI:3603877, RGD:10047273, RGD:10047255 NCBI chr 5:133,724,796...133,725,656
Ensembl chr 5:133,724,796...133,725,656 		JBrowse link
G Sox11 SRY-box transcription factor 11 ISS
ISO		 GO_REF:0000024
(MGI:3797299|PMID:18423449)		 UniProt
RGD		 PMID:18423449 GO_REF:0000024 MGI:3797299 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983 		JBrowse link
positive regulation of lens fiber cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf2 fibroblast growth factor 2 ISS
ISO		 GO_REF:0000024
(PMID:29501879)		 UniProt
RGD		 PMID:29501879 GO_REF:0000024 NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 ISO (MGI:3604916|PMID:16162653) RGD PMID:16162653 MGI:3604916 NCBI chr 3:29,857,289...29,985,932
Ensembl chr 3:29,862,473...29,996,865 		JBrowse link
post-embryonic camera-type eye development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BAF chromatin remodeling complex subunit BCL11B ISO MGI:2663971 (MGI:2662810|PMID:12717433) RGD PMID:12717433 MGI:2662810 NCBI chr 6:131,834,097...131,927,251
Ensembl chr 6:131,834,097...131,926,272 		JBrowse link
G Fzd5 frizzled class receptor 5 IEA
ISO		 GO_REF:0000107
MGI:3574771|MGI:3583769 (MGI:3821812|PMID:18791178), (MGI:3826935|PMID:18832390)		 Ensembl
RGD		 PMID:18791178 PMID:18832390 GO_REF:0000107 MGI:3821812 MGI:3826935 NCBI chr 9:71,443,784...71,445,541
Ensembl chr 9:71,443,588...71,445,739 		JBrowse link
G Klf4 Kruppel like factor 4 ISO MGI:2183917|MGI:3045749 (MGI:3697243|PMID:17060454) RGD PMID:17060454 MGI:3697243 NCBI chr 5:72,283,311...72,287,669
Ensembl chr 5:72,283,313...72,287,669 		JBrowse link
G Muc4 mucin 4, cell surface associated IEP RGD PMID:11120573 RGD:2303744 NCBI chr11:71,242,973...71,285,217
Ensembl chr11:71,243,334...71,284,939 		JBrowse link
G Vegfa vascular endothelial growth factor A ISO MGI:1931047 (MGI:1339868|PMID:10229225) RGD PMID:10229225 MGI:1339868 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681 		JBrowse link
post-embryonic camera-type eye morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bak1 BCL2-antagonist/killer 1 ISO MGI:99702 (MGI:3692135|PMID:15955981) RGD PMID:15955981 MGI:3692135 NCBI chr20:5,609,620...5,618,899
Ensembl chr20:5,609,625...5,618,260 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator IEA
ISO		 GO_REF:0000107
MGI:1097161 (MGI:3692135|PMID:15955981)		 Ensembl
RGD		 PMID:15955981 GO_REF:0000107 MGI:3692135 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207 		JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 ISO MGI:96683 (MGI:5318610|PMID:22426483) RGD PMID:22426483 MGI:5318610 NCBI chr12:9,033,993...9,205,886
Ensembl chr12:9,034,308...9,205,905 		JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 ISO MGI:3590648 (MGI:3614611|PMID:16466397) RGD PMID:16466397 MGI:3614611 NCBI chr11:36,474,028...36,479,947
Ensembl chr11:36,474,840...36,479,868 		JBrowse link
G Kdr kinase insert domain receptor ISO MGI:95558 (MGI:5318610|PMID:22426483) RGD PMID:22426483 MGI:5318610 NCBI chr14:34,727,677...34,787,127
Ensembl chr14:34,727,623...34,787,183 		JBrowse link
G Mir23a microRNA 23a ISO (MGI:5516374|PMID:24101522) RGD PMID:24101522 MGI:5516374 NCBI chr19:25,318,582...25,318,656
Ensembl chr19:25,318,582...25,318,656 		JBrowse link
post-embryonic retina morphogenesis in camera-type eye term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc66 coiled-coil domain containing 66 ISO MGI:3893603 (MGI:5141557|PMID:21680557) RGD PMID:21680557 MGI:5141557 NCBI chr16:3,107,119...3,139,188
Ensembl chr16:3,110,239...3,139,177 		JBrowse link
G Crb1 crumbs cell polarity complex component 1 ISO (MGI:2675211|PMID:12915475), (MGI:3051713|PMID:15316081), (MGI:3690408|PMID:16885194) RGD PMID:12915475 PMID:15316081 PMID:16885194 MGI:2675211 MGI:3051713 MGI:3690408 NCBI chr13:56,270,519...56,462,893
Ensembl chr13:56,270,781...56,462,834 		JBrowse link
G Dscam DS cell adhesion molecule IEA
ISO		 GO_REF:0000107
MGI:3761008 (MGI:3768917|PMID:18216855)		 Ensembl
RGD		 PMID:18216855 GO_REF:0000107 MGI:3768917 NCBI chr11:37,004,776...37,599,866
Ensembl chr11:37,004,902...37,253,776 		JBrowse link
G Grk1 G protein-coupled receptor kinase 1 ISO MGI:2668595 (MGI:1334014|PMID:10097103) RGD PMID:10097103 MGI:1334014 NCBI chr16:81,153,489...81,165,442
Ensembl chr16:81,153,489...81,165,442 		JBrowse link
regulation of lens fiber cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1b cyclin-dependent kinase inhibitor 1B ISO MGI:104564 (MGI:1309707|PMID:9784491) RGD PMID:9784491 MGI:1309707 NCBI chr 4:168,689,043...168,694,159
Ensembl chr 4:168,689,163...168,693,964 		JBrowse link
G Cdkn1c cyclin-dependent kinase inhibitor 1C ISO MGI:104565 (MGI:1309707|PMID:9784491) RGD PMID:9784491 MGI:1309707 NCBI chr 1:216,661,067...216,663,791
Ensembl chr 1:216,661,080...216,663,721 		JBrowse link
regulation of neural retina development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll4 delta like canonical Notch ligand 4 ISO (MGI:5314555|PMID:22323600) RGD PMID:22323600 MGI:5314555 NCBI chr 3:111,135,011...111,146,746
Ensembl chr 3:111,135,021...111,145,986 		JBrowse link
G Ptf1a pancreas associated transcription factor 1a ISS
ISO		 GO_REF:0000024
(MGI:3691257|PMID:17075007)		 UniProt
RGD		 PMID:17075007 GO_REF:0000024 MGI:3691257 NCBI chr17:86,199,623...86,201,477
Ensembl chr17:86,199,623...86,201,477 		JBrowse link
G Six3 SIX homeobox 3 ISO (MGI:4837018|PMID:20890044) RGD PMID:20890044 MGI:4837018 NCBI chr 6:8,886,730...8,891,094
Ensembl chr 6:8,886,591...8,889,925 		JBrowse link
regulation of retina development in camera-type eye term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf4 CUGBP, Elav-like family member 4 ISO (MGI:5523751|PMID:23932931) RGD PMID:23932931 MGI:5523751 NCBI chr18:17,689,090...18,079,835
Ensembl chr18:17,698,038...17,716,880 		JBrowse link
retina development in camera-type eye term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ache acetylcholinesterase IEA
ISO		 GO_REF:0000107
MGI:2179948 (MGI:3603700|PMID:15579149)		 Ensembl
RGD		 PMID:15579149 GO_REF:0000107 MGI:3603700 NCBI chr12:22,472,358...22,477,052
Ensembl chr12:22,472,358...22,478,753 		JBrowse link
G Actb actin, beta IEP RGD PMID:22916200 RGD:9587758 NCBI chr12:13,715,843...13,718,813
Ensembl chr12:13,715,843...13,718,841 		JBrowse link
G Agtpbp1 ATP/GTP binding protein 1 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:5,510,009...5,614,416
Ensembl chr17:5,511,385...5,614,435 		JBrowse link
G Ahi1 Abelson helper integration site 1 ISO MGI:4360696 (MGI:4461813|PMID:20592197) RGD PMID:20592197 MGI:4461813 NCBI chr 1:16,478,127...16,601,769
Ensembl chr 1:16,478,127...16,601,769 		JBrowse link
G Apc APC regulator of WNT signaling pathway ISO MGI:1857951 (MGI:3699582|PMID:10982921) RGD PMID:10982921 MGI:3699582 NCBI chr18:27,011,710...27,106,323
Ensembl chr18:27,047,382...27,105,531 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator IEA
ISO		 GO_REF:0000107
MGI:1857429 (MGI:1277631|PMID:9699561)		 Ensembl
RGD		 PMID:9699561 GO_REF:0000107 MGI:1277631 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207 		JBrowse link
G Bmp4 bone morphogenetic protein 4 IEP RGD PMID:17069773 RGD:2289001 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740 		JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B ISO MGI:2158497 (MGI:2654391|PMID:12654290) RGD PMID:12654290 MGI:2654391 NCBI chr 2:247,392,195...247,662,026
Ensembl chr 2:247,403,920...247,446,882 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 IEP RGD PMID:10482474 RGD:5129487 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494 		JBrowse link
G C3 complement C3 ISO (MGI:5883383|PMID:28057640) RGD PMID:28057640 MGI:5883383 NCBI chr 9:9,721,137...9,747,084
Ensembl chr 9:9,721,105...9,747,167 		JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F ISO MGI:3605845 (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr  X:15,712,709...15,741,135
Ensembl chr  X:15,712,713...15,741,103 		JBrowse link
G Calb1 calbindin 1 ISO (PMID:10741426) RGD PMID:10741426 NCBI chr 5:29,538,380...29,562,774
Ensembl chr 5:29,538,380...29,562,773 		JBrowse link
G Cep290 centrosomal protein 290 ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 7:40,217,269...40,306,327
Ensembl chr 7:40,217,269...40,306,327 		JBrowse link
G Cfd complement factor D ISO (MGI:5883383|PMID:28057640) RGD PMID:28057640 MGI:5883383 NCBI chr 7:12,634,216...12,635,939
Ensembl chr 7:12,634,216...12,635,943 		JBrowse link
G Cfh complement factor H ISO (MGI:3760334|PMID:17921253), (MGI:5883383|PMID:28057640), (MGI:6304909|PMID:30705315) RGD PMID:17921253 PMID:28057640 PMID:30705315 MGI:3760334 MGI:5883383 MGI:6304909 NCBI chr13:56,979,155...57,080,540
Ensembl chr13:56,978,607...57,080,622 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 ISO (PMID:15300250) RGD PMID:15300250 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696 		JBrowse link
G Clcn2 chloride voltage-gated channel 2 ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr11:82,862,664...82,876,165
Ensembl chr11:83,883,879...83,897,394 		JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein ISO MGI:1856959 (MGI:3695117|PMID:15565184), (MGI:4849309|PMID:21052544) RGD PMID:15565184 PMID:21052544 MGI:3695117 MGI:4849309 NCBI chr16:79,828,321...79,838,212
Ensembl chr16:79,828,324...79,838,212 		JBrowse link
G Crb1 crumbs cell polarity complex component 1 ISO (MGI:5315300|PMID:22447858), (MGI:5608935|PMID:25147295) RGD PMID:22447858 PMID:25147295 MGI:5315300 MGI:5608935 NCBI chr13:56,270,519...56,462,893
Ensembl chr13:56,270,781...56,462,834 		JBrowse link
G Crx cone-rod homeobox ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 1:77,744,593...77,758,913
Ensembl chr 1:77,745,288...77,750,960 		JBrowse link
G Dcx doublecortin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:115,098,675...115,175,515
Ensembl chr  X:115,098,675...115,175,299 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 ISS
ISO		 GO_REF:0000024
(MGI:3848562|PMID:19389377)		 UniProt
RGD		 PMID:19389377 GO_REF:0000024 MGI:3848562 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379 		JBrowse link
G Drd4 dopamine receptor D4 IEP RGD PMID:18778704 RGD:7175073 NCBI chr 1:214,278,296...214,282,818
Ensembl chr 1:214,278,296...214,281,483 		JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 IEP RGD PMID:23954924 RGD:11251759 NCBI chr17:20,090,136...20,182,332
Ensembl chr17:20,090,246...20,182,206 		JBrowse link
G Gdnf glial cell derived neurotrophic factor IEP RGD PMID:16650834 RGD:2324945 NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 8:116,433,302...116,438,038
Ensembl chr 8:116,433,302...116,438,038 		JBrowse link
G Gnb1 G protein subunit beta 1 ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 5:172,914,025...172,981,403
Ensembl chr 5:172,934,990...172,979,986 		JBrowse link
G Grm6 glutamate metabotropic receptor 6 ISO MGI:3605835 (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr10:36,345,503...36,363,416
Ensembl chr10:36,345,939...36,360,665 		JBrowse link
G Grn granulin precursor ISO MGI:3762618 (MGI:6101836|PMID:28728022) RGD PMID:28728022 MGI:6101836 NCBI chr10:90,377,103...90,383,207
Ensembl chr10:90,376,933...90,383,205 		JBrowse link
G Hpca hippocalcin IEP RGD PMID:7789406 RGD:9686441 NCBI chr 5:147,295,124...147,305,757
Ensembl chr 5:147,294,820...147,303,346 		JBrowse link
G Hps1 HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 1:261,989,178...262,015,282
Ensembl chr 1:261,989,178...262,015,153 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 ISO MGI:2158690 (MGI:3831471|PMID:18940586) RGD PMID:18940586 MGI:3831471 NCBI chr14:91,782,281...91,867,828
Ensembl chr14:91,782,354...91,867,424 		JBrowse link
G Il4 interleukin 4 IEP RGD PMID:23070471 RGD:7829830 NCBI chr10:38,963,979...38,969,531
Ensembl chr10:38,963,979...38,969,531 		JBrowse link
G Impdh1 inosine monophosphate dehydrogenase 1 IEP RGD PMID:18295529 RGD:5144133 NCBI chr 4:56,478,383...56,493,987
Ensembl chr 4:56,478,384...56,493,923 		JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 IEP RGD PMID:18295529 RGD:5144133 NCBI chr 8:117,346,983...117,351,619
Ensembl chr 8:117,347,029...117,351,610 		JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase ISO MGI:3580706 (MGI:3580691|PMID:15345036) RGD PMID:15345036 MGI:3580691 NCBI chr10:105,781,752...105,787,803
Ensembl chr10:105,781,753...105,787,803 		JBrowse link
G Lama1 laminin subunit alpha 1 ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 9:115,916,907...116,042,123
Ensembl chr 9:115,916,907...116,042,123 		JBrowse link
G Lamb2 laminin subunit beta 2 IEA
ISO		 GO_REF:0000107
MGI:1344394 (MGI:4454394|PMID:19907020)		 Ensembl
RGD		 PMID:19907020 GO_REF:0000107 MGI:4454394 NCBI chr 8:117,268,335...117,280,517
Ensembl chr 8:117,268,337...117,280,517 		JBrowse link
G Lamc3 laminin subunit gamma 3 ISO MGI:99916 (MGI:4454394|PMID:19907020) RGD PMID:19907020 MGI:4454394 NCBI chr 3:9,265,407...9,327,107
Ensembl chr 3:9,267,122...9,326,993 		JBrowse link
G Lhx1 LIM homeobox 1 ISO (PMID:10741426) RGD PMID:10741426 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293 		JBrowse link
G Lhx2 LIM homeobox 2 ISO
IEA		 MGI:97490 (MGI:3836385|PMID:19146846)
GO_REF:0000107		 RGD
Ensembl		 PMID:19146846 GO_REF:0000107 MGI:3836385 NCBI chr 3:22,628,674...22,658,447
Ensembl chr 3:22,640,545...22,658,446 		JBrowse link
G Lif LIF, interleukin 6 family cytokine IDA RGD PMID:16643897 RGD:2326157 NCBI chr14:84,482,652...84,500,574
Ensembl chr14:84,482,674...84,500,642 		JBrowse link
G Lpcat1 lysophosphatidylcholine acyltransferase 1 ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 1:32,379,431...32,429,917
Ensembl chr 1:32,379,432...32,429,917 		JBrowse link
G Max MYC associated factor X IEP RGD PMID:14603520 RGD:2316820 NCBI chr 6:99,984,260...100,011,460
Ensembl chr 6:99,984,260...100,011,388 		JBrowse link
G Mdm1 Mdm1 nuclear protein ISO
IBA		 MGI:2664154 (MGI:4849309|PMID:21052544)
PMID:21873635		 RGD PMID:21052544, PMID:21873635 MGI:4849309, RGD:13792537 NCBI chr 7:61,165,652...61,200,865
Ensembl chr 7:61,165,640...61,200,879 		JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 3:121,235,230...121,340,932
Ensembl chr 3:121,235,119...121,342,444 		JBrowse link
G Mfrp membrane frizzled-related protein ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 8:48,437,720...48,443,421
Ensembl chr 8:48,437,918...48,443,421 		JBrowse link
G Mir183 microRNA 183 ISO MGI:2676846|MGI:3619440 (MGI:5469752|PMID:23341629), (MGI:6108693|PMID:28819115) RGD PMID:23341629 PMID:28819115 MGI:5469752 MGI:6108693 NCBI chr 4:57,463,569...57,463,678
Ensembl chr 4:57,463,569...57,463,678 		JBrowse link
G Mir96 microRNA 96 ISO MGI:2676846|MGI:2676847 (MGI:5469752|PMID:23341629), (MGI:6108693|PMID:28819115) RGD PMID:23341629 PMID:28819115 MGI:5469752 MGI:6108693 NCBI chr 4:57,463,366...57,463,471
Ensembl chr 4:57,463,366...57,463,471 		JBrowse link
G Musk muscle associated receptor tyrosine kinase IEP RGD PMID:16899069 RGD:2317091 NCBI chr 5:75,392,790...75,498,694
Ensembl chr 5:75,392,790...75,498,694 		JBrowse link
G Myh10 myosin heavy chain 10 ISO MGI:2386445 (MGI:1099556|PMID:9356462), (MGI:1933038|PMID:11283949) RGD PMID:9356462 PMID:11283949 MGI:1099556 MGI:1933038 NCBI chr10:55,274,910...55,406,738
Ensembl chr10:55,275,411...55,406,732 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 ISO MGI:3605480 (MGI:3604842|PMID:15728677) RGD PMID:15728677 MGI:3604842 NCBI chr 8:48,094,233...48,198,499
Ensembl chr 8:48,094,673...48,157,305 		JBrowse link
G Neurod4 neuronal differentiation 4 IEP RGD PMID:15345241 RGD:2311603 NCBI chr 7:9,699,964...9,712,067
Ensembl chr 7:9,699,961...9,711,928 		JBrowse link
G Nos3 nitric oxide synthase 3 IEP RGD PMID:16639026 RGD:7771562 NCBI chr 4:7,321,908...7,342,404
Ensembl chr 4:7,320,668...7,342,410 		JBrowse link
G Nphp1 nephrocystin 1 ISO (MGI:3839506|PMID:19208653) RGD PMID:19208653 MGI:3839506 NCBI chr 3:120,316,048...120,370,089
Ensembl chr 3:120,316,047...120,373,500 		JBrowse link
G Nphp4 nephrocystin 4 ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 5:169,647,581...169,744,662
Ensembl chr 5:169,659,188...169,744,660 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 ISO MGI:2176490|MGI:2176560 (MGI:2151063|PMID:11997145), (MGI:3624573|PMID:16702404) RGD PMID:11997145 PMID:16702404 MGI:2151063 MGI:3624573 NCBI chr20:47,286,843...47,306,318
Ensembl chr20:47,288,137...47,306,318 		JBrowse link
G Nr2e3 nuclear receptor subfamily 2, group E, member 3 ISO MGI:1346317 (MGI:3624051|PMID:12407160), (MGI:4849309|PMID:21052544) RGD PMID:12407160 PMID:21052544 MGI:3624051 MGI:4849309 NCBI chr 8:64,797,518...64,801,587
Ensembl chr 8:64,797,518...64,800,467 		JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 ISO (MGI:5619875|PMID:25542970) RGD PMID:25542970 MGI:5619875 NCBI chr17:5,934,651...6,245,778
Ensembl chr17:5,933,729...6,244,676 		JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase IEP RGD PMID:15505078 RGD:1547836 NCBI chr11:74,717,600...74,793,902
Ensembl chr11:74,720,254...74,793,803 		JBrowse link
G Pax4 paired box 4 IEP RGD PMID:19012751 RGD:2311636 NCBI chr 4:55,735,640...55,753,461
Ensembl chr 4:55,735,682...55,740,627 		JBrowse link
G Pax6 paired box 6 IEP
ISO
IEA		 MGI:96785 (MGI:3836385|PMID:19146846)
GO_REF:0000107		 RGD
Ensembl		 PMID:19146846, PMID:19012751 GO_REF:0000107 MGI:3836385, RGD:2311636 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624 		JBrowse link
G Pde6a phosphodiesterase 6A ISO
IBA		 (MGI:4849309|PMID:21052544)
PMID:21873635		 RGD PMID:21052544, PMID:21873635 MGI:4849309, RGD:13792537 NCBI chr18:56,544,652...56,617,480
Ensembl chr18:56,544,652...56,617,480 		JBrowse link
G Pde6b phosphodiesterase 6B ISO
IBA		 (MGI:4849309|PMID:21052544)
PMID:21873635		 RGD PMID:21052544, PMID:21873635 MGI:4849309, RGD:13792537 NCBI chr14:2,328,690...2,371,913
Ensembl chr14:2,328,750...2,371,883 		JBrowse link
G Pdgfb platelet derived growth factor subunit B ISO MGI:2670574 (MGI:5607451|PMID:25224828) RGD PMID:25224828 MGI:5607451 NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741 		JBrowse link
G Pfdn5 prefoldin subunit 5 ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 7:143,924,662...143,929,400
Ensembl chr 7:143,924,662...143,929,397 		JBrowse link
G Pou4f2 POU class 4 homeobox 2 ISO MGI:2176272|MGI:3582493 (MGI:3621691|PMID:9630743), (MGI:80981|PMID:8637595) RGD PMID:8637595 PMID:9630743 MGI:3621691 MGI:80981 NCBI chr19:33,160,180...33,163,821
Ensembl chr19:33,160,180...33,163,821 		JBrowse link
G Prph2 peripherin 2 ISO MGI:1856523|MGI:6367794|MGI:97998 (MGI:3610839|PMID:15964665), (MGI:4849309|PMID:21052544), (MGI:5905515|PMID:28053051) RGD PMID:15964665 PMID:21052544 PMID:28053051 MGI:3610839 MGI:4849309 MGI:5905515 NCBI chr 9:16,085,933...16,386,176 JBrowse link
G Ptn pleiotrophin IEP RGD PMID:16914133, PMID:8453763 RGD:9831439, RGD:9831456 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996 		JBrowse link
G Rarb retinoic acid receptor, beta ISO MGI:97858 (MGI:81656|PMID:8681798) RGD PMID:8681798 MGI:81656 NCBI chr15:9,915,223...10,262,599
Ensembl chr15:10,120,206...10,262,599 		JBrowse link
G Rarg retinoic acid receptor, gamma ISO MGI:97857 (MGI:81656|PMID:8681798) RGD PMID:8681798 MGI:81656 NCBI chr 7:143,840,739...143,863,206
Ensembl chr 7:143,839,980...143,863,186 		JBrowse link
G Rbp4 retinol binding protein 4 ISO MGI:2445721 (MGI:2150869|PMID:11562477) RGD PMID:11562477 MGI:2150869 NCBI chr 1:256,806,476...256,813,678
Ensembl chr 1:256,806,472...256,813,711 		JBrowse link
G Rd3 retinal degeneration 3, GUCY2D regulator ISO
IBA		 (MGI:4849309|PMID:21052544), (MGI:52860|PMID:8486383)
PMID:21873635		 RGD PMID:8486383 PMID:21052544, PMID:21873635 MGI:4849309 MGI:52860, RGD:13792537 NCBI chr13:110,739,645...110,749,167
Ensembl chr13:110,743,098...110,748,365 		JBrowse link
G Ret ret proto-oncogene IEP RGD PMID:16650834 RGD:2324945 NCBI chr 4:150,202,170...150,249,196
Ensembl chr 4:150,202,058...150,244,372 		JBrowse link
G Rho rhodopsin IEA
ISO		 GO_REF:0000107
(MGI:4849309|PMID:21052544)		 Ensembl
RGD		 PMID:21052544 GO_REF:0000107 MGI:4849309 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298 		JBrowse link
G Rnpep arginyl aminopeptidase IEP RGD PMID:15500823 RGD:2325937 NCBI chr13:52,092,863...52,124,006
Ensembl chr13:52,092,859...52,111,363 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 ISO MGI:102791|MGI:2181662 (MGI:5905515|PMID:28053051) RGD PMID:28053051 MGI:5905515 NCBI chr 1:225,126,732...225,128,740
Ensembl chr 1:225,126,734...225,128,740 		JBrowse link
G Rorb RAR-related orphan receptor B ISS
ISO		 GO_REF:0000024
(MGI:5546314|PMID:23652001)		 UniProt
RGD		 PMID:23652001 GO_REF:0000024 MGI:5546314 NCBI chr 1:234,252,757...234,442,597
Ensembl chr 1:234,252,757...234,435,839 		JBrowse link
G Rp1 RP1, axonemal microtubule associated ISO
IBA		 (MGI:4849309|PMID:21052544)
PMID:21873635		 RGD PMID:21052544, PMID:21873635 MGI:4849309, RGD:13792537 NCBI chr 5:15,005,028...15,060,508
Ensembl chr 5:15,043,955...15,060,508 		JBrowse link
G Rp1l1 RP1 like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:47,344,380...47,384,461
Ensembl chr15:47,373,120...47,383,508 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 2:266,141,581...266,169,197
Ensembl chr 2:266,141,581...266,169,197 		JBrowse link
G Rpgrip1 RPGR interacting protein 1 ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr15:28,521,287...28,575,046
Ensembl chr15:28,522,737...28,574,737 		JBrowse link
G Rpl24 ribosomal protein L24 ISO MGI:1856685 (MGI:1097191|PMID:9331275), (MGI:1332363|PMID:10049578) RGD PMID:9331275 PMID:10049578 MGI:1097191 MGI:1332363 NCBI chr11:47,116,885...47,122,093
Ensembl chr11:47,116,886...47,122,095 		JBrowse link
G Rrm1 ribonucleotide reductase catalytic subunit M1 IEP RGD PMID:2647502 RGD:5133699 NCBI chr 1:167,538,387...167,562,688
Ensembl chr 1:167,538,263...167,562,688 		JBrowse link
G Serpinf1 serpin family F member 1 IEP RGD PMID:21738387 RGD:8655555 NCBI chr10:62,241,750...62,254,145
Ensembl chr10:62,241,756...62,254,287 		JBrowse link
G Ski SKI proto-oncogene ISO MGI:2177555 (MGI:3693412|PMID:17003410) RGD PMID:17003410 MGI:3693412 NCBI chr 5:172,556,196...172,623,878
Ensembl chr 5:172,559,135...172,623,899 		JBrowse link
G Slc1a1 solute carrier family 1 member 1 ISO (MGI:6492417|PMID:28703795) RGD PMID:28703795 MGI:6492417 NCBI chr 1:246,955,017...247,035,159
Ensembl chr 1:246,954,980...247,037,056 		JBrowse link
G Slc4a5 solute carrier family 4 member 5 ISO (MGI:5292606|PMID:21705333) RGD PMID:21705333 MGI:5292606 NCBI chr 4:114,918,488...115,002,290
Ensembl chr 4:114,918,488...115,002,300 		JBrowse link
G Sox8 SRY-box transcription factor 8 ISS
ISO		 GO_REF:0000024
MGI:98371 (MGI:4368088|PMID:19490914)		 UniProt
RGD		 PMID:19490914 GO_REF:0000024 MGI:4368088 NCBI chr10:14,932,348...14,937,336
Ensembl chr10:14,932,348...14,937,336 		JBrowse link
G Sox9 SRY-box transcription factor 9 ISS
ISO		 GO_REF:0000024
MGI:98370 (MGI:4368088|PMID:19490914)		 UniProt
RGD		 PMID:19490914 GO_REF:0000024 MGI:4368088 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379 		JBrowse link
G Tbc1d32 TBC1 domain family, member 32 ISO MGI:4440463 (MGI:4439200|PMID:20159594) RGD PMID:20159594 MGI:4439200 NCBI chr20:37,463,879...37,701,268
Ensembl chr20:37,465,278...37,700,937 		JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 ISO MGI:3852642 (MGI:4819740|PMID:20711468) RGD PMID:20711468 MGI:4819740 NCBI chr 1:219,126,687...219,139,466
Ensembl chr 1:219,127,602...219,139,464 		JBrowse link
G Tent2 terminal nucleotidyltransferase 2 IEP RGD PMID:23700402 RGD:11041783 NCBI chr 2:22,746,290...22,798,252
Ensembl chr 2:22,747,547...22,798,214 		JBrowse link
G Tgif1 TGFB-induced factor homeobox 1 ISO (MGI:3826282|PMID:18973577) RGD PMID:18973577 MGI:3826282 NCBI chr 9:119,181,079...119,190,698
Ensembl chr 9:119,181,083...119,190,698 		JBrowse link
G Tgif2 TGFB-induced factor homeobox 2 ISO (MGI:3826300|PMID:18926818) RGD PMID:18926818 MGI:3826300 NCBI chr 3:152,906,961...152,924,380
Ensembl chr 3:152,909,189...152,924,377 		JBrowse link
G Ttll5 tubulin tyrosine ligase like 5 ISO (PMID:24791901) RGD PMID:24791901 NCBI chr 6:109,693,915...109,910,479
Ensembl chr 6:109,710,781...109,879,607 		JBrowse link
G Tub TUB bipartite transcription factor ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 1:173,550,929...173,629,550
Ensembl chr 1:173,607,101...173,625,550 		JBrowse link
G Tulp1 TUB like protein 1 ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr20:7,931,673...7,943,601
Ensembl chr20:7,931,674...7,943,575 		JBrowse link
G Uchl3 ubiquitin C-terminal hydrolase L3 ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr15:86,153,624...86,198,127
Ensembl chr15:86,153,628...86,198,127 		JBrowse link
G Ush2a usherin IEP RGD PMID:12160733 RGD:634438 NCBI chr13:106,750,738...107,434,195
Ensembl chr13:106,751,625...107,427,329 		JBrowse link
G Vax2 ventral anterior homeobox 2 IEA
ISO		 GO_REF:0000107
(MGI:1349226|PMID:10595508)		 Ensembl
RGD		 PMID:10595508 GO_REF:0000107 MGI:1349226 NCBI chr 4:115,388,839...115,412,515
Ensembl chr 4:115,388,839...115,412,515 		JBrowse link
G Xrn2 5'-3' exoribonuclease 2 IEP RGD PMID:23700402 RGD:11041783 NCBI chr 3:141,224,858...141,298,272
Ensembl chr 3:141,225,290...141,298,265 		JBrowse link
G Zfp513 zinc finger protein 513 ISO
ISS		 (PMID:20797688)
GO_REF:0000024		 RGD
UniProt		 PMID:20797688 GO_REF:0000024 NCBI chr 6:26,537,707...26,541,051
Ensembl chr 6:26,537,707...26,541,048 		JBrowse link
retina layer formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 ISS
ISO		 GO_REF:0000024
UniProtKB:F8W3V6 (MGI:5306539|PMID:21959375)		 UniProt
RGD		 PMID:21959375 GO_REF:0000024 MGI:5306539 NCBI chr 1:16,478,127...16,601,769
Ensembl chr 1:16,478,127...16,601,769 		JBrowse link
G Arl6 ADP-ribosylation factor like GTPase 6 ISO MGI:4442928|MGI:5310744 (MGI:4442100|PMID:20333246), (MGI:5306530|PMID:22139371) RGD PMID:20333246 PMID:22139371 MGI:4442100 MGI:5306530 NCBI chr11:42,858,476...42,884,324
Ensembl chr11:42,858,478...42,884,603 		JBrowse link
G Atp8a2 ATPase phospholipid transporting 8A2 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr15:39,955,689...40,488,737
Ensembl chr15:40,000,322...40,428,800 		JBrowse link
G Calb1 calbindin 1 ISO (PMID:10741426) RGD PMID:10741426 NCBI chr 5:29,538,380...29,562,774
Ensembl chr 5:29,538,380...29,562,773 		JBrowse link
G Crb1 crumbs cell polarity complex component 1 ISO
IEA		 (MGI:3696487|PMID:17234588)
GO_REF:0000107		 RGD
Ensembl		 PMID:17234588 GO_REF:0000107 MGI:3696487 NCBI chr13:56,270,519...56,462,893
Ensembl chr13:56,270,781...56,462,834 		JBrowse link
G Dscam DS cell adhesion molecule ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:37,004,776...37,599,866
Ensembl chr11:37,004,902...37,253,776 		JBrowse link
G Fat3 FAT atypical cadherin 3 ISO
IEA		 MGI:1341907 (MGI:5292419|PMID:21903076)
GO_REF:0000107		 RGD
Ensembl		 PMID:21903076 GO_REF:0000107 MGI:5292419 NCBI chr 8:14,417,039...15,011,596
Ensembl chr 8:14,417,584...14,880,644 		JBrowse link
G Fjx1 four-jointed box kinase 1 ISO MGI:2444314 (MGI:5292419|PMID:21903076) RGD PMID:21903076 MGI:5292419 NCBI chr 3:92,288,818...92,290,919
Ensembl chr 3:92,288,818...92,290,919 		JBrowse link
G Foxn4 forkhead box N4 ISO (MGI:3054139|PMID:15363391) RGD PMID:15363391 MGI:3054139 NCBI chr12:48,101,012...48,121,281
Ensembl chr12:48,101,673...48,121,270 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 IEA
ISO		 GO_REF:0000107
(MGI:4818711|PMID:20579985)		 Ensembl
RGD		 PMID:20579985 GO_REF:0000107 MGI:4818711 NCBI chr 2:206,224,015...206,274,910
Ensembl chr 2:206,224,015...206,274,079 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (MGI:4818711|PMID:20579985) RGD PMID:20579985 MGI:4818711 NCBI chr 4:66,438,390...66,625,183
Ensembl chr 4:66,445,266...66,624,912 		JBrowse link
G Igfn1 immunoglobulin-like and fibronectin type III domain containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:52,791,188...52,823,037
Ensembl chr13:52,791,606...52,834,134 		JBrowse link
G Irx6 iroquois homeobox 6 ISO MGI:5448232 (MGI:5447580|PMID:23172916) RGD PMID:23172916 MGI:5447580 NCBI chr19:15,726,633...15,733,442
Ensembl chr19:15,727,514...15,733,412 		JBrowse link
G Lhx1 LIM homeobox 1 ISS
ISO		 GO_REF:0000024
(MGI:3772525|PMID:18094249), (PMID:10741426)		 UniProt
RGD		 PMID:10741426 PMID:18094249 GO_REF:0000024 MGI:3772525 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293 		JBrowse link
G Megf11 multiple EGF-like-domains 11 ISO (MGI:5316136|PMID:22407321) RGD PMID:22407321 MGI:5316136 NCBI chr 8:69,859,256...70,191,070
Ensembl chr 8:69,971,778...70,184,742 		JBrowse link
G Obsl1 obscurin like cytoskeletal adaptor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:82,673,871...82,699,577
Ensembl chr 9:82,680,384...82,699,551 		JBrowse link
G Prom1 prominin 1 ISO (MGI:3838023|PMID:19228982) RGD PMID:19228982 MGI:3838023 NCBI chr14:71,532,321...71,637,400
Ensembl chr14:71,533,063...71,637,417 		JBrowse link
G Ptf1a pancreas associated transcription factor 1a ISS
ISO		 GO_REF:0000024
(MGI:3691257|PMID:17075007)		 UniProt
RGD		 PMID:17075007 GO_REF:0000024 MGI:3691257 NCBI chr17:86,199,623...86,201,477
Ensembl chr17:86,199,623...86,201,477 		JBrowse link
G Ptprm protein tyrosine phosphatase, receptor type, M ISO
ISS		 (PMID:14623235)
GO_REF:0000024		 RGD
UniProt		 PMID:14623235 GO_REF:0000024 NCBI chr 9:114,846,095...115,555,261
Ensembl chr 9:114,846,095...115,555,261 		JBrowse link
G Rdh13 retinol dehydrogenase 13 ISO MGI:5467544 (MGI:5462166|PMID:22605914) RGD PMID:22605914 MGI:5462166 NCBI chr 1:72,956,017...72,983,811
Ensembl chr 1:72,956,026...72,984,350 		JBrowse link
G Rs1 retinoschisin 1 ISO MGI:2179757|MGI:3056058 (MGI:2179152|PMID:11983912), (MGI:3055638|PMID:15326152) RGD PMID:11983912 PMID:15326152 MGI:2179152 MGI:3055638 NCBI chr  X:35,749,957...35,777,243
Ensembl chr  X:35,749,957...35,777,243 		JBrowse link
G Sdk2 sidekick cell adhesion molecule 2 ISO
IBA		 (MGI:5693671|PMID:26287463)
PMID:21873635		 RGD PMID:26287463, PMID:21873635 MGI:5693671, RGD:13792537 NCBI chr10:102,299,593...102,576,554
Ensembl chr10:102,303,028...102,576,878 		JBrowse link
G Slc1a1 solute carrier family 1 member 1 IEA
ISO		 GO_REF:0000107
MGI:2655190 (MGI:4414613|PMID:19766171), (MGI:6155272|PMID:29677370)		 Ensembl
RGD		 PMID:19766171 PMID:29677370 GO_REF:0000107 MGI:4414613 MGI:6155272 NCBI chr 1:246,955,017...247,035,159
Ensembl chr 1:246,954,980...247,037,056 		JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO (PMID:20607706) RGD PMID:20607706 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457 		JBrowse link
G Tfap2b transcription factor AP-2 beta ISO (PMID:20607706) RGD PMID:20607706 NCBI chr 9:25,410,669...25,440,568
Ensembl chr 9:25,410,669...25,440,411 		JBrowse link
G Tspan12 tetraspanin 12 ISS
ISO		 GO_REF:0000024
(MGI:4410396|PMID:19837033)		 UniProt
RGD		 PMID:19837033 GO_REF:0000024 MGI:4410396 NCBI chr 4:48,852,823...48,953,240
Ensembl chr 4:48,852,827...48,928,372 		JBrowse link
retina morphogenesis in camera-type eye term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 ISO MGI:3707409 (MGI:3703109|PMID:17092954) RGD PMID:17092954 MGI:3703109 NCBI chr 2:102,685,513...102,688,624
Ensembl chr 2:102,685,513...102,688,624 		JBrowse link
G Crb1 crumbs cell polarity complex component 1 ISO (MGI:2675211|PMID:12915475), (MGI:3696487|PMID:17234588), (MGI:5608935|PMID:25147295) RGD PMID:12915475 PMID:17234588 PMID:25147295 MGI:2675211 MGI:3696487 MGI:5608935 NCBI chr13:56,270,519...56,462,893
Ensembl chr13:56,270,781...56,462,834 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 IEA
ISO
ISS		 GO_REF:0000107
(MGI:3848562|PMID:19389377)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:19389377 GO_REF:0000024 GO_REF:0000107 MGI:3848562 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379 		JBrowse link
G Lrp5 LDL receptor related protein 5 ISO (PMID:15346351) RGD PMID:15346351 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094 		JBrowse link
G Lrp6 LDL receptor related protein 6 ISO MGI:2156191 (MGI:3823171|PMID:18985738) RGD PMID:18985738 MGI:3823171 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751 		JBrowse link
G Man2a1 mannosidase, alpha, class 2A, member 1 ISO MGI:2159011|MGI:2673381 (MGI:4453938|PMID:20144606) RGD PMID:20144606 MGI:4453938 NCBI chr 9:112,293,388...112,451,677
Ensembl chr 9:112,293,388...112,451,677 		JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A ISO (MGI:5789479|PMID:27008858) RGD PMID:27008858 MGI:5789479 NCBI chr 5:140,642,865...140,657,759
Ensembl chr 5:140,642,885...140,657,745 		JBrowse link
G Nectin3 nectin cell adhesion molecule 3 ISO MGI:3605481 (MGI:3604842|PMID:15728677) RGD PMID:15728677 MGI:3604842 NCBI chr11:57,897,879...57,995,193
Ensembl chr11:57,897,879...57,993,548 		JBrowse link
G Prom1 prominin 1 ISO (PMID:18654668) RGD PMID:18654668 NCBI chr14:71,532,321...71,637,400
Ensembl chr14:71,533,063...71,637,417 		JBrowse link
G Ptf1a pancreas associated transcription factor 1a ISO MGI:3701996 (MGI:3701413|PMID:17301087) RGD PMID:17301087 MGI:3701413 NCBI chr17:86,199,623...86,201,477
Ensembl chr17:86,199,623...86,201,477 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 ISO (MGI:4437581|PMID:20300562) RGD PMID:20300562 MGI:4437581 NCBI chr 1:225,126,732...225,128,740
Ensembl chr 1:225,126,734...225,128,740 		JBrowse link
G Rp1 RP1, axonemal microtubule associated ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 5:15,005,028...15,060,508
Ensembl chr 5:15,043,955...15,060,508 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 2:266,141,581...266,169,197
Ensembl chr 2:266,141,581...266,169,197 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator ISO MGI:2386674 (MGI:1354839|PMID:10725384) RGD PMID:10725384 MGI:1354839 NCBI chr  X:14,271,012...14,331,745
Ensembl chr  X:14,271,017...14,331,486 		JBrowse link
G Sox2 SRY-box transcription factor 2 ISO MGI:3625176 (MGI:3624065|PMID:16651659) RGD PMID:16651659 MGI:3624065 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545 		JBrowse link
G Vsx2 visual system homeobox 2 ISO MGI:1856112 (MGI:3701027|PMID:16854970), (MGI:79586|PMID:8630490) RGD PMID:8630490 PMID:16854970 MGI:3701027 MGI:79586 NCBI chr 6:108,285,031...108,308,588
Ensembl chr 6:108,285,822...108,308,587 		JBrowse link
retina vasculature development in camera-type eye term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2b activin A receptor type 2B IEA
ISO		 GO_REF:0000107
(MGI:4436974|PMID:19903896)		 Ensembl
RGD		 PMID:19903896 GO_REF:0000107 MGI:4436974 NCBI chr 8:128,087,308...128,126,776
Ensembl chr 8:128,087,345...128,118,746 		JBrowse link
G Acvrl1 activin A receptor like type 1 ISO (MGI:4436974|PMID:19903896) RGD PMID:19903896 MGI:4436974 NCBI chr 7:142,769,942...142,787,336
Ensembl chr 7:142,776,252...142,787,335 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 ISO (MGI:4436974|PMID:19903896) RGD PMID:19903896 MGI:4436974 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494 		JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 ISO MGI:2154690 (MGI:3829820|PMID:19005183) RGD PMID:19005183 MGI:3829820 NCBI chr 6:2,308,179...2,316,739
Ensembl chr 6:2,307,808...2,316,722 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEA
ISO		 GO_REF:0000107
MGI:2386679 (MGI:4950335|PMID:21212189)		 Ensembl
RGD		 PMID:21212189 GO_REF:0000107 MGI:4950335 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052 		JBrowse link
G Mir218-2 microRNA 218-2 ISO (MGI:5297649|PMID:20947829) RGD PMID:20947829 MGI:5297649 NCBI chr10:20,428,661...20,428,770
Ensembl chr10:20,428,661...20,428,770 		JBrowse link
G Mir23a microRNA 23a ISO (MGI:5002393|PMID:21536891) RGD PMID:21536891 MGI:5002393 NCBI chr19:25,318,582...25,318,656
Ensembl chr19:25,318,582...25,318,656 		JBrowse link
G Mir23b microRNA 23b ISO (MGI:5002393|PMID:21536891) RGD PMID:21536891 MGI:5002393 NCBI chr17:823,222...823,318
Ensembl chr17:823,222...823,318 		JBrowse link
G Mir24-2 microRNA 24-2 ISO (MGI:5002393|PMID:21536891) RGD PMID:21536891 MGI:5002393 NCBI chr19:25,318,863...25,318,970
Ensembl chr19:25,318,863...25,318,970 		JBrowse link
G Mir27a microRNA 27a ISO (MGI:5002393|PMID:21536891) RGD PMID:21536891 MGI:5002393 NCBI chr19:25,318,736...25,318,822
Ensembl chr19:25,318,736...25,318,822 		JBrowse link
G Mir27b microRNA 27b ISO (MGI:5002393|PMID:21536891) RGD PMID:21536891 MGI:5002393 NCBI chr17:823,461...823,557
Ensembl chr17:823,461...823,557 		JBrowse link
G Pdgfb platelet derived growth factor subunit B ISO MGI:2670574 (MGI:5607451|PMID:25224828) RGD PMID:25224828 MGI:5607451 NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha IEA
ISO
ISS		 GO_REF:0000107
UniProtKB:P05622 (MGI:1931346|PMID:11239463)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:11239463 GO_REF:0000024 GO_REF:0000107 MGI:1931346 NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISS
ISO		 GO_REF:0000024
UniProtKB:P26618 (MGI:1931346|PMID:11239463), (MGI:2680741|PMID:14624252)		 UniProt
RGD		 PMID:11239463 PMID:14624252 GO_REF:0000024 MGI:1931346 MGI:2680741 NCBI chr18:56,364,586...56,406,381
Ensembl chr18:56,364,620...56,406,381 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 ISO (MGI:4437581|PMID:20300562) RGD PMID:20300562 MGI:4437581 NCBI chr 1:225,126,732...225,128,740
Ensembl chr 1:225,126,734...225,128,740 		JBrowse link
retina vasculature morphogenesis in camera-type eye term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef15 Rho guanine nucleotide exchange factor 15 ISO MGI:3812708 (MGI:5441394|PMID:22535667) RGD PMID:22535667 MGI:5441394 NCBI chr10:55,532,097...55,545,675
Ensembl chr10:55,532,077...55,544,429 		JBrowse link
G Clic4 chloride intracellular channel 4 IEA
ISO		 GO_REF:0000107
MGI:3838012 (MGI:3837628|PMID:19197003)		 Ensembl
RGD		 PMID:19197003 GO_REF:0000107 MGI:3837628 NCBI chr 5:153,568,937...153,625,669
Ensembl chr 5:153,568,745...153,625,869 		JBrowse link
G Fzd4 frizzled class receptor 4 ISO
IBA		 (PMID:12172548), (PMID:15024691)
PMID:21873635
MGI:102570|MGI:1278315|MGI:4412057 (MGI:4366716|PMID:19837032)		 RGD PMID:12172548 PMID:15024691 PMID:19837032, PMID:21873635 MGI:4366716, RGD:13792537 NCBI chr 1:153,589,471...153,598,376
Ensembl chr 1:153,589,471...153,598,375 		JBrowse link
G Lrp5 LDL receptor related protein 5 ISO MGI:102570|MGI:108520|MGI:2183279|MGI:3774282 (MGI:2178168|PMID:11956231), (MGI:3790936|PMID:18263894), (MGI:4366716|PMID:19837032) RGD PMID:11956231 PMID:18263894 PMID:19837032 MGI:2178168 MGI:3790936 MGI:4366716 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094 		JBrowse link
G Ndp norrin cystine knot growth factor NDP ISO MGI:108520|MGI:1278315 (MGI:4366716|PMID:19837032) RGD PMID:19837032 MGI:4366716 NCBI chr  X:6,791,090...6,815,586
Ensembl chr  X:6,791,136...6,815,583
Ensembl chr  X:6,791,136...6,815,583 		JBrowse link
G Nrp1 neuropilin 1 ISO (MGI:5562961|PMID:24401374) RGD PMID:24401374 MGI:5562961 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858 		JBrowse link
G Rhoj ras homolog family member J ISO MGI:4365246 (MGI:5441394|PMID:22535667) RGD PMID:22535667 MGI:5441394 NCBI chr 6:98,284,361...98,367,122
Ensembl chr 6:98,284,170...98,367,756 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 ISO MGI:2682641 (MGI:2680888|PMID:12808454) RGD PMID:12808454 MGI:2680888 NCBI chr15:11,832,611...11,912,923
Ensembl chr15:11,836,286...11,912,916 		JBrowse link
retinal bipolar neuron differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 ISO MGI:3707409 (MGI:3703109|PMID:17092954) RGD PMID:17092954 MGI:3703109 NCBI chr 2:102,685,513...102,688,624
Ensembl chr 2:102,685,513...102,688,624 		JBrowse link
G Cabp4 calcium binding protein 4 ISO MGI:3056615 (MGI:3609280|PMID:16249514) RGD PMID:16249514 MGI:3609280 NCBI chr 1:219,383,452...219,388,009
Ensembl chr 1:219,383,452...219,388,009 		JBrowse link
G Casz1 castor zinc finger 1 ISO (MGI:5630049|PMID:24467707) RGD PMID:24467707 MGI:5630049 NCBI chr 5:165,625,119...165,777,053
Ensembl chr 5:165,724,027...165,774,616 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 ISO (MGI:5629913|PMID:25654255) RGD PMID:25654255 MGI:5629913 NCBI chr14:91,782,281...91,867,828
Ensembl chr14:91,782,354...91,867,424 		JBrowse link
G Irx5 iroquois homeobox 5 ISO MGI:1890816 (MGI:3776945|PMID:18322081) RGD PMID:18322081 MGI:3776945 NCBI chr19:16,415,813...16,421,088
Ensembl chr19:16,415,636...16,421,191 		JBrowse link
G Irx6 iroquois homeobox 6 ISO MGI:5448232 (MGI:5447580|PMID:23172916) RGD PMID:23172916 MGI:5447580 NCBI chr19:15,726,633...15,733,442
Ensembl chr19:15,727,514...15,733,412 		JBrowse link
G Vsx1 visual system homeobox 1 ISO MGI:1859086|MGI:3033929|MGI:3040317 (MGI:3029641|PMID:14745032), (MGI:3039332|PMID:15043821), (MGI:3776945|PMID:18322081) RGD PMID:14745032 PMID:15043821 PMID:18322081 MGI:3029641 MGI:3039332 MGI:3776945 NCBI chr 3:146,484,235...146,494,757
Ensembl chr 3:146,484,238...146,491,837 		JBrowse link
G Vsx2 visual system homeobox 2 ISO MGI:1856112 (MGI:79586|PMID:8630490) RGD PMID:8630490 MGI:79586 NCBI chr 6:108,285,031...108,308,588
Ensembl chr 6:108,285,822...108,308,587 		JBrowse link
G Zhx2 zinc fingers and homeoboxes 2 ISO (MGI:6214404|PMID:30146259) RGD PMID:30146259 MGI:6214404 NCBI chr 7:97,559,653...97,707,872
Ensembl chr 7:97,559,841...97,695,739 		JBrowse link
retinal blood vessel morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034833.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:53,872...54,885 JBrowse link
G AABR07071701.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 8:126,975,833...126,976,850 JBrowse link
G Col4a1 collagen type IV alpha 1 chain ISO (PMID:20818663) RGD PMID:20818663 NCBI chr16:83,522,162...83,632,153
Ensembl chr16:83,522,162...83,632,153 		JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 IEA
ISO
ISS		 GO_REF:0000107
(MGI:4431324|PMID:20032512)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:20032512 GO_REF:0000024 GO_REF:0000107 MGI:4431324 NCBI chr 6:2,308,179...2,316,739
Ensembl chr 6:2,307,808...2,316,722 		JBrowse link
G Fzd4 frizzled class receptor 4 ISO (MGI:3621833|PMID:15035989) RGD PMID:15035989 MGI:3621833 NCBI chr 1:153,589,471...153,598,376
Ensembl chr 1:153,589,471...153,598,375 		JBrowse link
G Lama1 laminin subunit alpha 1 ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 9:115,916,907...116,042,123
Ensembl chr 9:115,916,907...116,042,123 		JBrowse link
G LOC102554748 nidogen-2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:380,313...427,615
Ensembl chr 7:380,741...381,732 		JBrowse link
G Lrp5 LDL receptor related protein 5 ISO
IBA		 (PMID:15024691), (PMID:15346351)
PMID:21873635
(MGI:6092915|PMID:27031698)		 RGD PMID:15024691 PMID:15346351 PMID:27031698, PMID:21873635 MGI:6092915, RGD:13792537 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094 		JBrowse link
retinal cone cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 ISO (MGI:4437526|PMID:20081859) RGD PMID:20081859 MGI:4437526 NCBI chr 1:16,478,127...16,601,769
Ensembl chr 1:16,478,127...16,601,769 		JBrowse link
G Cabp4 calcium binding protein 4 ISO MGI:3056615 (MGI:3609280|PMID:16249514) RGD PMID:16249514 MGI:3609280 NCBI chr 1:219,383,452...219,388,009
Ensembl chr 1:219,383,452...219,388,009 		JBrowse link
G Cnga3 cyclic nucleotide gated channel subunit alpha 3 ISO MGI:3608770 (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 9:43,807,412...43,858,225
Ensembl chr 9:43,807,677...43,854,396 		JBrowse link
G Crb2 crumbs cell polarity complex component 2 ISO
IEA		 (MGI:5461109|PMID:23001562)
GO_REF:0000107		 RGD
Ensembl		 PMID:23001562 GO_REF:0000107 MGI:5461109 NCBI chr 3:22,037,812...22,061,247
Ensembl chr 3:22,038,357...22,058,871 		JBrowse link
G Dio3 iodothyronine deiodinase 3 ISO MGI:2664293 (MGI:4441081|PMID:20203194) RGD PMID:20203194 MGI:4441081 NCBI chr 6:134,627,278...134,629,139
Ensembl chr 6:134,627,278...134,629,138 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 ISO MGI:3588845 (MGI:3714271|PMID:17065522), (MGI:4849309|PMID:21052544) RGD PMID:17065522 PMID:21052544 MGI:3714271 MGI:4849309 NCBI chr 2:210,880,754...210,890,765
Ensembl chr 2:210,880,777...210,889,881 		JBrowse link
G Hcn1 hyperpolarization-activated cyclic nucleotide-gated potassium channel 1 IEA
ISO		 GO_REF:0000107
(MGI:4849309|PMID:21052544)		 Ensembl
RGD		 PMID:21052544 GO_REF:0000107 MGI:4849309 NCBI chr 2:50,099,576...50,499,799
Ensembl chr 2:50,099,576...50,499,799 		JBrowse link
G Mir124-1 microRNA 124-1 ISO MGI:3618700|MGI:5307015|MGI:5307017 (MGI:5303045|PMID:21857657) RGD PMID:21857657 MGI:5303045 NCBI chr15:47,964,298...47,964,382
Ensembl chr15:47,964,298...47,964,382 		JBrowse link
G Mir124-2 microRNA 124-2 ISO MGI:2676807 (MGI:5303045|PMID:21857657) RGD PMID:21857657 MGI:5303045 NCBI chr 2:102,311,603...102,311,711
Ensembl chr 2:102,311,603...102,311,711 		JBrowse link
G Mir183 microRNA 183 ISO MGI:2676846|MGI:3619440 (MGI:5469752|PMID:23341629) RGD PMID:23341629 MGI:5469752 NCBI chr 4:57,463,569...57,463,678
Ensembl chr 4:57,463,569...57,463,678 		JBrowse link
G Mir96 microRNA 96 ISO MGI:2676846|MGI:2676847 (MGI:5469752|PMID:23341629) RGD PMID:23341629 MGI:5469752 NCBI chr 4:57,463,366...57,463,471
Ensembl chr 4:57,463,366...57,463,471 		JBrowse link
G Pde6c phosphodiesterase 6C ISO (MGI:4849309|PMID:21052544) RGD PMID:21052544 MGI:4849309 NCBI chr 1:256,822,099...256,885,879
Ensembl chr 1:256,822,334...256,877,810 		JBrowse link
G Rorb RAR-related orphan receptor B IEA
ISO
ISS		 GO_REF:0000107
(MGI:3652638|PMID:16574740)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:16574740 GO_REF:0000024 GO_REF:0000107 MGI:3652638 NCBI chr 1:234,252,757...234,442,597
Ensembl chr 1:234,252,757...234,435,839 		JBrowse link
G Rp1 RP1, axonemal microtubule associated ISO (MGI:2676521|PMID:14507858) RGD PMID:14507858 MGI:2676521 NCBI chr 5:15,005,028...15,060,508
Ensembl chr 5:15,043,955...15,060,508 		JBrowse link
G Thrb thyroid hormone receptor beta IEA
ISO		 GO_REF:0000107
(MGI:4441081|PMID:20203194)		 Ensembl
RGD		 PMID:20203194 GO_REF:0000107 MGI:4441081 NCBI chr15:8,890,578...9,239,815
Ensembl chr15:8,890,578...9,086,282 		JBrowse link
G Thy1 Thy-1 cell surface antigen ISS
IBA
ISO		 GO_REF:0000024
PMID:21873635
(MGI:1349255|PMID:10567740)		 UniProt
RGD		 PMID:10567740, PMID:21873635 GO_REF:0000024 MGI:1349255, RGD:13792537 NCBI chr 8:48,382,121...48,387,271
Ensembl chr 8:48,382,121...48,386,935 		JBrowse link
G Ush1c USH1 protein network component harmonin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:102,207,096...102,256,779
Ensembl chr 1:102,207,096...102,255,459 		JBrowse link
retinal pigment epithelium development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfh complement factor H ISO (MGI:5532224|PMID:23844226), (MGI:5648643|PMID:25991857) RGD PMID:23844226 PMID:25991857 MGI:5532224 MGI:5648643 NCBI chr13:56,979,155...57,080,540
Ensembl chr13:56,978,607...57,080,622 		JBrowse link
G Ihh Indian hedgehog signaling molecule ISO MGI:1934258 (MGI:3807419|PMID:18582859) RGD PMID:18582859 MGI:3807419 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440 		JBrowse link
G Med1 mediator complex subunit 1 ISO (MGI:2158098|PMID:11724781) RGD PMID:11724781 MGI:2158098 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880 		JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A ISO (MGI:5789479|PMID:27008858) RGD PMID:27008858 MGI:5789479 NCBI chr 5:140,642,865...140,657,759
Ensembl chr 5:140,642,885...140,657,745 		JBrowse link
G Pax2 paired box 2 ISS
ISO		 GO_REF:0000024
(MGI:84247|PMID:8951055)		 UniProt
RGD		 PMID:8951055 GO_REF:0000024 MGI:84247 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329 		JBrowse link
G Rarb retinoic acid receptor, beta ISO MGI:97858 (MGI:81656|PMID:8681798) RGD PMID:8681798 MGI:81656 NCBI chr15:9,915,223...10,262,599
Ensembl chr15:10,120,206...10,262,599 		JBrowse link
G Rarg retinoic acid receptor, gamma ISO MGI:97857 (MGI:81656|PMID:8681798) RGD PMID:8681798 MGI:81656 NCBI chr 7:143,840,739...143,863,206
Ensembl chr 7:143,839,980...143,863,186 		JBrowse link
G Tbc1d32 TBC1 domain family, member 32 ISO MGI:4440463 (MGI:4439200|PMID:20159594) RGD PMID:20159594 MGI:4439200 NCBI chr20:37,463,879...37,701,268
Ensembl chr20:37,465,278...37,700,937 		JBrowse link
retinal rod cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 ISO (MGI:4437526|PMID:20081859) RGD PMID:20081859 MGI:4437526 NCBI chr 1:16,478,127...16,601,769
Ensembl chr 1:16,478,127...16,601,769 		JBrowse link
G Alms1 ALMS1, centrosome and basal body associated protein ISO MGI:3576051 (MGI:3588454|PMID:16000322) RGD PMID:16000322 MGI:3588454 NCBI chr 4:117,371,544...117,472,310
Ensembl chr 4:117,371,659...117,472,198 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 ISO MGI:3045473 (MGI:3044824|PMID:15173597) RGD PMID:15173597 MGI:3044824 NCBI chr 8:64,115,005...64,154,432
Ensembl chr 8:64,121,392...64,154,396 		JBrowse link
G Bhlhe23 basic helix-loop-helix family, member e23 ISO MGI:3054837 (MGI:3814679|PMID:17255172) RGD PMID:17255172 MGI:3814679