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ONTOLOGY REPORT - ANNOTATIONS

Term:chordate embryonic development
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Accession:GO:0043009 term browser browse the term
Definition:The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching.
Synonyms:only_in_taxon: NCBITaxon:7711 ! Chordata

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chordate embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca1 BRCA1 DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9171368) TreeGrafter
MGI		 PMID:9171368 GO_REF:0000118 NCBI chrNW_004936490:17,735,444...17,801,456 JBrowse link
G Brca2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (PMID:9171368) MGI PMID:9171368 NCBI chrNW_004936472:26,945,659...27,017,693 JBrowse link
G Cenpu centromere protein U involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23724000) Ensembl
MGI		 PMID:23724000 GO_REF:0000107 NCBI chrNW_004936554:4,497,675...4,536,274
Ensembl chrNW_004936554:4,500,486...4,536,239 		JBrowse link
G Fas Fas cell surface death receptor ISO RGD PMID:11331665 RGD:8686426 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Lims1 LIM zinc finger domain containing 1 acts_upstream_of_or_within ISO (PMID:15798193) MGI PMID:15798193 NCBI chrNW_004936829:187,234...240,213 JBrowse link
G Trip6 thyroid hormone receptor interactor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:838,266...841,705
Ensembl chrNW_004936543:838,209...841,913 		JBrowse link
G Vezt vezatin, adherens junctions transmembrane protein acts_upstream_of_or_within ISO (PMID:16199027) MGI PMID:16199027 NCBI chrNW_004936507:11,438,790...11,518,021
Ensembl chrNW_004936507:11,438,901...11,515,151 		JBrowse link
anterior neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp3 caspase 3 acts_upstream_of_or_within ISO (PMID:21515572) MGI PMID:21515572 NCBI chrNW_004936554:4,571,072...4,593,765 JBrowse link
G Folr1 folate receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:1,489,916...1,497,200
Ensembl chrNW_004936498:1,491,547...1,497,226 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21515572) Ensembl
MGI		 PMID:21515572 GO_REF:0000107 NCBI chrNW_004936470:41,856,683...41,961,666
Ensembl chrNW_004936470:41,859,035...42,002,844 		JBrowse link
G Specc1l sperm antigen with calponin homology and coiled-coil domains 1 like acts_upstream_of_or_within ISO (PMID:26787558) MGI PMID:26787558 NCBI chrNW_004936619:448,304...592,981
Ensembl chrNW_004936619:448,303...593,001 		JBrowse link
anterior neuropore closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gatad2a GATA zinc finger domain containing 2A acts_upstream_of_or_within ISO (PMID:17565372) MGI PMID:17565372 NCBI chrNW_004936596:1,958,961...2,074,471
Ensembl chrNW_004936596:1,958,844...2,074,707 		JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:8622765) MGI PMID:8622765 NCBI chrNW_004936534:2,481,804...2,518,573
Ensembl chrNW_004936534:2,481,806...2,499,317 		JBrowse link
axis elongation involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:11029008) MGI PMID:11029008 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191 		JBrowse link
G Med12 mediator complex subunit 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20630950) Ensembl
MGI		 PMID:20630950 GO_REF:0000107 NCBI chrNW_004936762:460,342...483,264
Ensembl chrNW_004936762:460,342...483,195 		JBrowse link
G Wnt3a Wnt family member 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11029008) Ensembl
MGI		 PMID:11029008 GO_REF:0000107 NCBI chrNW_004936864:150,742...179,205
Ensembl chrNW_004936864:150,732...192,423 		JBrowse link
blastocyst development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 acts_upstream_of_or_within ISO MGI MGI:1888635 NCBI chrNW_004936481:17,438,146...17,460,329
Ensembl chrNW_004936481:17,436,270...17,460,348 		JBrowse link
G Bnip2 BCL2 interacting protein 2 acts_upstream_of_or_within ISO (PMID:19117032) MGI PMID:19117032 NCBI chrNW_004936471:20,655,415...20,675,351
Ensembl chrNW_004936471:20,652,601...20,675,325 		JBrowse link
G Capn2 calpain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16433929) Ensembl
MGI		 PMID:16433929 GO_REF:0000107 NCBI chrNW_004936526:879,765...932,682
Ensembl chrNW_004936526:879,765...932,682 		JBrowse link
G Cdx2 caudal type homeobox 2 acts_upstream_of_or_within ISO (PMID:15788452) MGI PMID:15788452 NCBI chrNW_004936472:23,137,936...23,141,205 JBrowse link
G Dad1 defender against cell death 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10748466) Ensembl
MGI		 PMID:10748466 GO_REF:0000107 NCBI chrNW_004936722:1,678,952...1,698,583
Ensembl chrNW_004936722:1,678,862...1,698,579 		JBrowse link
G Elf3 E74 like ETS transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16630543) Ensembl
MGI		 PMID:16630543 GO_REF:0000107 NCBI chrNW_004936567:2,494,645...2,500,361
Ensembl chrNW_004936567:2,494,505...2,499,601 		JBrowse link
G Emg1 EMG1 N1-specific pseudouridine methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20858271) Ensembl
MGI		 PMID:20858271 GO_REF:0000107 NCBI chrNW_004936709:847,229...854,471
Ensembl chrNW_004936709:845,633...854,976 		JBrowse link
G Eomes eomesodermin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15788452) Ensembl
MGI		 PMID:15788452 GO_REF:0000107 NCBI chrNW_004936473:18,825,969...18,833,179
Ensembl chrNW_004936473:18,825,942...18,833,179 		JBrowse link
G Etv2 ETS variant transcription factor 2 acts_upstream_of_or_within ISO (PMID:16630543) MGI PMID:16630543 NCBI chrNW_004936570:671,152...673,768 JBrowse link
G G2e3 G2/M-phase specific E3 ubiquitin protein ligase acts_upstream_of_or_within ISO (PMID:18511420) MGI PMID:18511420 NCBI chrNW_004936494:5,352,126...5,409,648
Ensembl chrNW_004936494:5,352,238...5,409,739 		JBrowse link
G Gdf9 growth differentiation factor 9 involved_in ISO (PMID:24313324) AgBase PMID:24313324 NCBI chrNW_004936647:2,351,604...2,357,043
Ensembl chrNW_004936647:2,353,198...2,356,790 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:8,289,764...8,292,937
Ensembl chrNW_004936515:8,289,315...8,293,175 		JBrowse link
G Hnf1a HNF1 homeobox A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16880268) Ensembl
MGI		 PMID:16880268 GO_REF:0000107 NCBI chrNW_004936668:62,103...81,549
Ensembl chrNW_004936668:67,535...81,505 		JBrowse link
G Hormad1 HORMA domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:933,123...956,201
Ensembl chrNW_004936580:933,365...954,486 		JBrowse link
G Kpna7 karyopherin subunit alpha 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20699224) Ensembl
MGI		 PMID:20699224 GO_REF:0000107 NCBI chrNW_004936750:1,496,735...1,519,759
Ensembl chrNW_004936750:1,498,637...1,519,759 		JBrowse link
G LOC101959402 deleted in malignant brain tumors 1 protein acts_upstream_of_or_within ISO (PMID:15452149) MGI PMID:15452149 NCBI chrNW_004936486:11,377,485...11,545,624 JBrowse link
G LOC101973967 cyclin-dependent kinase 11B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936737:1,609,676...1,628,861 JBrowse link
G Med21 mediator complex subunit 21 acts_upstream_of_or_within ISO (PMID:10500093) MGI PMID:10500093 NCBI chrNW_004936548:461,610...466,682
Ensembl chrNW_004936548:461,605...466,723 		JBrowse link
G N4bp2l2 NEDD4 binding protein 2 like 2 acts_upstream_of_or_within ISO (PMID:18360097) MGI PMID:18360097 NCBI chrNW_004936472:27,045,052...27,134,170 JBrowse link
G Nasp nuclear autoantigenic sperm protein involved_in ISO (MGI:3694318|PMID:16728391) UniProt PMID:16728391 MGI:3694318 NCBI chrNW_004936474:26,710,364...26,743,336
Ensembl chrNW_004936474:26,710,229...26,743,254 		JBrowse link
G Nek2 NIMA related kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19117032) Ensembl
MGI		 PMID:19117032 GO_REF:0000107 NCBI chrNW_004936557:1,683,027...1,695,410
Ensembl chrNW_004936557:1,682,984...1,695,414 		JBrowse link
G Npm2 nucleophosmin/nucleoplasmin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:5,850,024...5,868,049
Ensembl chrNW_004936555:5,844,854...5,868,306 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 involved_in ISO (MGI:4946964|PMID:21258368) BHF-UCL PMID:21258368 MGI:4946964 NCBI chrNW_004936837:827,568...838,933 JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12606345) Ensembl
MGI		 PMID:12606345 GO_REF:0000107 NCBI chrNW_004936558:3,631,794...3,651,754
Ensembl chrNW_004936558:3,630,561...3,651,786 		JBrowse link
G Psmc3 proteasome 26S subunit, ATPase 3 acts_upstream_of_or_within ISO (PMID:10945464) MGI PMID:10945464 NCBI chrNW_004936562:1,810,883...1,817,040
Ensembl chrNW_004936562:1,810,864...1,823,077 		JBrowse link
G Psmc4 proteasome 26S subunit, ATPase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10945464) Ensembl
MGI		 PMID:10945464 GO_REF:0000107 NCBI chrNW_004936661:2,522,665...2,528,279
Ensembl chrNW_004936661:2,522,615...2,528,284 		JBrowse link
G Rpl13 ribosomal protein L13 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:26902285) Ensembl
MGI		 PMID:26902285 GO_REF:0000107 NCBI chrNW_004936641:437,684...441,257
Ensembl chrNW_004936641:437,731...440,999 		JBrowse link
G Rrm2 ribonucleotide reductase regulatory subunit M2 acts_upstream_of ISO (PMID:26902285) MGI PMID:26902285 NCBI chrNW_004936532:6,348,041...6,390,144 JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11313485)
(PMID:11263494)		 Ensembl
MGI		 PMID:11263494 PMID:11313485 GO_REF:0000107 NCBI chrNW_004936619:1,276,239...1,308,945
Ensembl chrNW_004936619:1,275,362...1,308,913 		JBrowse link
G Specc1 sperm antigen with calponin homology and coiled-coil domains 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:34166821) Ensembl
MGI		 PMID:34166821 GO_REF:0000107 NCBI chrNW_004936821:641,863...914,188
Ensembl chrNW_004936821:641,852...914,208 		JBrowse link
G Spic Spi-C transcription factor acts_upstream_of_or_within ISO (PMID:16630543) MGI PMID:16630543 NCBI chrNW_004936492:12,532,389...12,539,965 JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9921650) Ensembl
MGI		 PMID:9921650 GO_REF:0000107 NCBI chrNW_004936524:7,656,523...7,680,043
Ensembl chrNW_004936524:7,655,847...7,681,097 		JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 acts_upstream_of_or_within ISO (PMID:9921650) MGI PMID:9921650 NCBI chrNW_004936537:7,154,125...7,340,218
Ensembl chrNW_004936537:7,175,516...7,336,895 		JBrowse link
G Thoc2 THO complex 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24315442) Ensembl
MGI		 PMID:24315442 GO_REF:0000107 NCBI chrNW_004936479:6,855,405...6,972,256
Ensembl chrNW_004936479:6,855,411...6,972,256 		JBrowse link
G Thoc5 THO complex subunit 5 acts_upstream_of_or_within ISO (PMID:24315442) MGI PMID:24315442 NCBI chrNW_004936657:3,465,707...3,503,966
Ensembl chrNW_004936657:3,461,789...3,503,976 		JBrowse link
G Xab2 XPA binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15725628) Ensembl
MGI		 PMID:15725628 GO_REF:0000107 NCBI chrNW_004936588:4,670,866...4,679,888
Ensembl chrNW_004936588:4,670,841...4,679,965 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of		 IEA
ISO		 (PMID:26902285) Ensembl
MGI		 PMID:26902285 GO_REF:0000107 NCBI chrNW_004936551:5,638,383...5,740,523
Ensembl chrNW_004936551:5,634,751...5,740,567 		JBrowse link
blastocyst formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl6a actin like 6A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936566:3,577,412...3,587,182
Ensembl chrNW_004936566:3,573,974...3,595,534 		JBrowse link
G Bysl bystin like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17242206) Ensembl
MGI		 PMID:17242206 GO_REF:0000107 NCBI chrNW_004936476:17,887,998...17,896,598
Ensembl chrNW_004936476:17,888,335...17,896,268 		JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 acts_upstream_of_or_within ISO (PMID:17784788) MGI PMID:17784788 NCBI chrNW_004936877:523,022...528,387 JBrowse link
G Furin furin, paired basic amino acid cleaving enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:16,136,099...16,147,945
Ensembl chrNW_004936483:16,136,099...16,144,635 		JBrowse link
G Gabpa GA binding protein transcription factor subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936640:1,882,297...1,917,210
Ensembl chrNW_004936640:1,882,238...1,914,232 		JBrowse link
G Kdm4c lysine demethylase 4C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19696013) Ensembl
MGI		 PMID:19696013 GO_REF:0000107 NCBI chrNW_004936539:1,198,105...1,580,078
Ensembl chrNW_004936539:1,198,147...1,580,082 		JBrowse link
G Matr3 matrin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936531:8,385,919...8,418,753
Ensembl chrNW_004936531:8,385,743...8,420,836 		JBrowse link
G Mfn2 mitofusin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16083859) Ensembl
MGI		 PMID:16083859 GO_REF:0000107 NCBI chrNW_004936474:767,754...795,258
Ensembl chrNW_004936474:767,671...796,556 		JBrowse link
G Mfng MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936492:3,547,345...3,561,940
Ensembl chrNW_004936492:3,547,282...3,562,022 		JBrowse link
G Mxi1 MAX interactor 1, dimerization protein acts_upstream_of_or_within ISO (PMID:27869233) MGI PMID:27869233 NCBI chrNW_004936486:1,103,908...1,173,982
Ensembl chrNW_004936486:1,101,552...1,177,220 		JBrowse link
G Nop2 NOP2 nucleolar protein acts_upstream_of_or_within ISO (PMID:27869233) MGI PMID:27869233 NCBI chrNW_004936709:1,215,100...1,228,117 JBrowse link
G Pbrm1 polybromo 1 acts_upstream_of_or_within ISO (PMID:27869233) MGI PMID:27869233 NCBI chrNW_004936473:3,382,618...3,476,049
Ensembl chrNW_004936473:3,382,260...3,476,052 		JBrowse link
G Pnldc1 PARN like ribonuclease domain containing exonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936489:11,289,557...11,308,136
Ensembl chrNW_004936489:11,290,008...11,308,118 		JBrowse link
G Ptpn18 protein tyrosine phosphatase non-receptor type 18 acts_upstream_of_or_within ISO (PMID:27869233) MGI PMID:27869233 NCBI chrNW_004936469:41,104,698...41,117,753 JBrowse link
G Rpl7l1 ribosomal protein L7 like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23211737), (PMID:27869233) Ensembl
MGI		 PMID:23211737 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936476:17,022,292...17,030,534
Ensembl chrNW_004936476:17,017,950...17,030,857 		JBrowse link
G Rrp7a ribosomal RNA processing 7 homolog A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23211737), (PMID:27869233) Ensembl
MGI		 PMID:23211737 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936718:498,841...506,972
Ensembl chrNW_004936718:496,742...507,016 		JBrowse link
G Rtn4 reticulon 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936491:1,407,414...1,474,031
Ensembl chrNW_004936491:1,407,414...1,474,360 		JBrowse link
G Sf3b1 splicing factor 3b subunit 1 acts_upstream_of_or_within ISO (PMID:23211737), (PMID:27869233) MGI PMID:23211737 PMID:27869233 NCBI chrNW_004936506:1,749,591...1,790,860
Ensembl chrNW_004936506:1,749,563...1,791,739 		JBrowse link
G Sf3b6 splicing factor 3b subunit 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23211737), (PMID:27869233) Ensembl
MGI		 PMID:23211737 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936493:7,906,701...7,912,777
Ensembl chrNW_004936493:7,906,701...7,912,438 		JBrowse link
G Skil SKI like proto-oncogene involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10811619) Ensembl
MGI		 PMID:10811619 GO_REF:0000107 NCBI chrNW_004936593:2,109,414...2,132,871
Ensembl chrNW_004936593:2,109,223...2,132,882 		JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936538:4,878,645...4,910,613
Ensembl chrNW_004936538:4,878,662...4,910,597 		JBrowse link
G Tead4 TEA domain transcription factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18804437) Ensembl
MGI		 PMID:18804437 GO_REF:0000107 NCBI chrNW_004936606:3,310,905...3,358,519
Ensembl chrNW_004936606:3,310,823...3,356,509 		JBrowse link
G Tjp1 tight junction protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18423437) Ensembl
MGI		 PMID:18423437 GO_REF:0000107 NCBI chrNW_004936483:1,814,870...2,045,802
Ensembl chrNW_004936483:1,814,894...2,030,946 		JBrowse link
G Tm4sf1 transmembrane 4 L six family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936519:6,306,281...6,314,045
Ensembl chrNW_004936519:6,305,881...6,314,113 		JBrowse link
G Txnrd3 thioredoxin reductase 3 acts_upstream_of_or_within ISO (PMID:27869233) MGI PMID:27869233 NCBI chrNW_004936798:1,190,975...1,231,732
Ensembl chrNW_004936798:1,203,418...1,230,988 		JBrowse link
G Uspl1 ubiquitin specific peptidase like 1 acts_upstream_of_or_within ISO (PMID:27869233) MGI PMID:27869233 NCBI chrNW_004936472:25,370,381...25,409,800
Ensembl chrNW_004936472:25,374,332...25,410,343 		JBrowse link
G Wdr74 WD repeat domain 74 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21799883), (PMID:27869233) Ensembl
MGI		 PMID:21799883 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936581:456,354...461,610
Ensembl chrNW_004936581:455,606...461,635 		JBrowse link
G Zp3 zona pellucida glycoprotein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,013,231...2,022,270 JBrowse link
blastocyst growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24036311) Ensembl
MGI		 PMID:24036311 GO_REF:0000107 NCBI chrNW_004936528:7,585,937...7,613,022
Ensembl chrNW_004936528:7,585,787...7,613,047 		JBrowse link
G Ints1 integrator complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17544522) Ensembl
MGI		 PMID:17544522 GO_REF:0000107 NCBI chrNW_004936754:1,597,574...1,626,578
Ensembl chrNW_004936754:1,597,575...1,626,398 		JBrowse link
G Nbn nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936544:3,773,828...3,812,673
Ensembl chrNW_004936544:3,775,220...3,808,837 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (PMID:24036311) MGI PMID:24036311 NCBI chrNW_004936837:827,568...838,933 JBrowse link
G Rad51b RAD51 paralog B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10567591) Ensembl
MGI		 PMID:10567591 GO_REF:0000107 NCBI chrNW_004936495:11,185,560...11,762,254
Ensembl chrNW_004936495:11,195,767...11,467,458 		JBrowse link
G Rtf1 RTF1 homolog, Paf1/RNA polymerase II complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24036311) Ensembl
MGI		 PMID:24036311 GO_REF:0000107 NCBI chrNW_004936471:4,770,060...4,829,562
Ensembl chrNW_004936471:4,770,063...4,829,578 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (PMID:11163203) MGI PMID:11163203 NCBI chrNW_004936659:1,152,846...1,246,718
Ensembl chrNW_004936659:1,169,792...1,249,213 		JBrowse link
G Ubtfl1 upstream binding transcription factor like 1 acts_upstream_of_or_within ISO (PMID:19915186) MGI PMID:19915186 NCBI chrNW_004936933:371,183...376,907 JBrowse link
G Znf830 zinc finger protein 830 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15988037) Ensembl
MGI		 PMID:15988037 GO_REF:0000107 NCBI chrNW_004936538:243,557...245,353
Ensembl chrNW_004936538:244,188...245,300 		JBrowse link
blastocyst hatching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap3 A-kinase anchoring protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936606:4,771,158...4,794,666
Ensembl chrNW_004936606:4,771,180...4,794,902 		JBrowse link
G Ankrd7 ankyrin repeat domain 7 acts_upstream_of_or_within ISO (PMID:27869233) MGI PMID:27869233 NCBI chrNW_004936589:1,069,112...1,106,858 JBrowse link
G Arhgdig Rho GDP dissociation inhibitor gamma involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936501:637,150...640,984
Ensembl chrNW_004936501:637,299...639,096 		JBrowse link
G Asf1b anti-silencing function 1B histone chaperone involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936659:2,772,310...2,782,687
Ensembl chrNW_004936659:2,770,900...2,782,748 		JBrowse link
G Bcor BCL6 corepressor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936502:6,764,043...6,812,194
Ensembl chrNW_004936502:6,764,907...6,792,916 		JBrowse link
G Ccdc24 coiled-coil domain containing 24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936474:25,308,459...25,313,073
Ensembl chrNW_004936474:25,309,054...25,312,215 		JBrowse link
G Ccdc62 coiled-coil domain containing 62 acts_upstream_of_or_within ISO (PMID:27869233) MGI PMID:27869233 NCBI chrNW_004936558:1,807,973...1,851,208 JBrowse link
G Cmtm3 CKLF like MARVEL transmembrane domain containing 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936475:16,929,726...16,935,403
Ensembl chrNW_004936475:16,929,628...16,931,385 		JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936528:7,585,937...7,613,022
Ensembl chrNW_004936528:7,585,787...7,613,047 		JBrowse link
G CUNH6orf141 chromosome unknown C6orf141 homolog acts_upstream_of_or_within ISO (PMID:27869233) MGI PMID:27869233 NCBI chrNW_004936476:11,151,455...11,155,130 JBrowse link
G Fbll1 fibrillarin like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936622:844,128...846,673
Ensembl chrNW_004936622:846,044...847,081 		JBrowse link
G Grn granulin precursor acts_upstream_of_or_within ISO (PMID:15901638) MGI PMID:15901638 NCBI chrNW_004936541:793,548...800,271
Ensembl chrNW_004936541:793,523...800,217 		JBrowse link
G Hcfc1 host cell factor C1 acts_upstream_of_or_within ISO (PMID:27869233) MGI PMID:27869233 NCBI chrNW_004936809:827,008...853,689
Ensembl chrNW_004936809:827,031...853,644 		JBrowse link
G Hs3st6 heparan sulfate-glucosamine 3-sulfotransferase 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 Ensembl chrNW_004936694:2,100,040...2,105,658 JBrowse link
G LOC101955001 UTP6 small subunit processome component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:3,004,851...3,039,422
Ensembl chrNW_004936538:3,004,835...3,042,142
Ensembl chrNW_004936538:3,004,835...3,042,142 		JBrowse link
G LOC101973689 solute carrier family 35 member E2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936737:1,590,095...1,607,894
Ensembl chrNW_004936737:1,595,278...1,607,997 		JBrowse link
G Lpar6 lysophosphatidic acid receptor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936565:1,688,218...1,689,876
Ensembl chrNW_004936565:1,688,314...1,689,348 		JBrowse link
G Ndufa2 NADH:ubiquinone oxidoreductase subunit A2 acts_upstream_of_or_within ISO (PMID:27869233) MGI PMID:27869233 NCBI chrNW_004936531:9,587,139...9,589,007 JBrowse link
G Necab1 N-terminal EF-hand calcium binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936544:4,439,739...4,589,060
Ensembl chrNW_004936544:4,439,900...4,583,885 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936741:1,131,792...1,207,460
Ensembl chrNW_004936741:1,128,616...1,207,499 		JBrowse link
G Phf6 PHD finger protein 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936691:716,723...767,960
Ensembl chrNW_004936691:716,697...768,016 		JBrowse link
G Plpp4 phospholipid phosphatase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936486:9,697,598...9,811,994
Ensembl chrNW_004936486:9,697,592...9,812,011 		JBrowse link
G Ppp4r4 protein phosphatase 4 regulatory subunit 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936733:2,007,843...2,119,766
Ensembl chrNW_004936733:2,007,839...2,119,503 		JBrowse link
G Rbbp8 RB binding protein 8, endonuclease involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15831459) Ensembl
MGI		 PMID:15831459 GO_REF:0000107 NCBI chrNW_004936550:2,482,915...2,554,077 JBrowse link
G Slc25a34 solute carrier family 25 member 34 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936474:3,367,374...3,371,315
Ensembl chrNW_004936474:3,367,695...3,370,133 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (PMID:11163203) MGI PMID:11163203 NCBI chrNW_004936659:1,152,846...1,246,718
Ensembl chrNW_004936659:1,169,792...1,249,213 		JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11313485)
(PMID:11263494)		 Ensembl
MGI		 PMID:11263494 PMID:11313485 GO_REF:0000107 NCBI chrNW_004936619:1,276,239...1,308,945
Ensembl chrNW_004936619:1,275,362...1,308,913 		JBrowse link
G Smim14 small integral membrane protein 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936482:7,131,500...7,206,489
Ensembl chrNW_004936482:7,131,501...7,206,378 		JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936520:9,869,166...9,990,205
Ensembl chrNW_004936520:9,869,195...9,988,541 		JBrowse link
G Stmn3 stathmin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936514:10,910,444...10,914,676
Ensembl chrNW_004936514:10,906,732...10,912,960 		JBrowse link
G Suds3 SDS3 homolog, SIN3A corepressor complex component acts_upstream_of_or_within ISO (PMID:27869233) MGI PMID:27869233 NCBI chrNW_004936668:2,078,783...2,113,154
Ensembl chrNW_004936668:2,077,729...2,113,361 		JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within ISO (PMID:27869233) MGI PMID:27869233 NCBI chrNW_004936721:646,778...661,144
Ensembl chrNW_004936721:646,772...661,091 		JBrowse link
G Tbl1xr1 TBL1X/Y related 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936566:5,721,541...5,861,838
Ensembl chrNW_004936566:5,790,532...5,861,838 		JBrowse link
G Ube2a ubiquitin conjugating enzyme E2 A acts_upstream_of_or_within ISO (PMID:27869233) MGI PMID:27869233 NCBI chrNW_004936479:10,330,666...10,340,268
Ensembl chrNW_004936479:10,330,632...10,340,367 		JBrowse link
G Zbed6 zinc finger BED-type containing 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 NCBI chrNW_004936567:895,758...901,684
Ensembl chrNW_004936567:897,053...899,992 		JBrowse link
G Zfp14 ZFP14 zinc finger protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27869233) Ensembl
MGI		 PMID:27869233 GO_REF:0000107 Ensembl chrNW_004936922:516,805...530,368 JBrowse link
G Zfp30 ZFP30 zinc finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936801:542,165...559,235
Ensembl chrNW_004936801:543,275...551,303 		JBrowse link
G Znf420 zinc finger protein 420 acts_upstream_of_or_within ISO (PMID:27869233) MGI PMID:27869233 NCBI chrNW_004936801:338,743...403,206 JBrowse link
branching involved in labyrinthine layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16981008) Ensembl
MGI		 PMID:16981008 GO_REF:0000107 NCBI chrNW_004936528:8,005,223...8,007,586
Ensembl chrNW_004936528:8,005,189...8,007,643 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:9435295) MGI PMID:9435295 NCBI chrNW_004936486:10,506,680...10,606,272
Ensembl chrNW_004936486:10,507,097...10,602,019 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23610556) Ensembl
MGI		 PMID:23610556 GO_REF:0000107 NCBI chrNW_004936631:3,909,046...3,915,939
Ensembl chrNW_004936631:3,911,693...3,915,560 		JBrowse link
G Gcm1 glial cells missing transcription factor 1 acts_upstream_of_or_within ISO (PMID:10888880) MGI PMID:10888880 NCBI chrNW_004936476:7,724,666...7,738,401 JBrowse link
G Grb2 growth factor receptor bound protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11369229) Ensembl
MGI		 PMID:11369229 GO_REF:0000107 NCBI chrNW_004936594:592,760...661,369
Ensembl chrNW_004936594:592,740...661,369 		JBrowse link
G Il10 interleukin 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12842419) Ensembl
MGI		 PMID:12842419 GO_REF:0000107 NCBI chrNW_004936557:5,834,874...5,838,502
Ensembl chrNW_004936557:5,834,874...5,838,502 		JBrowse link
G Llgl2 LLGL scribble cell polarity complex component 2 acts_upstream_of_or_within ISO (PMID:21606200) MGI PMID:21606200 NCBI chrNW_004936594:754,140...792,493
Ensembl chrNW_004936594:765,310...792,155 		JBrowse link
G Rspo3 R-spondin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16963017) Ensembl
MGI		 PMID:16963017 GO_REF:0000107 NCBI chrNW_004936639:2,475,710...2,552,725
Ensembl chrNW_004936639:2,475,710...2,552,725 		JBrowse link
G Socs3 suppressor of cytokine signaling 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11481489) Ensembl
MGI		 PMID:11481489 GO_REF:0000107 NCBI chrNW_004936594:2,932,297...2,935,358
Ensembl chrNW_004936594:2,933,747...2,934,451 		JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17174946) Ensembl
MGI		 PMID:17174946 GO_REF:0000107 NCBI chrNW_004936471:4,238,883...4,251,291
Ensembl chrNW_004936471:4,238,845...4,251,350 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30236446) Ensembl
MGI		 PMID:30236446 GO_REF:0000107 NCBI chrNW_004936558:1,223,114...1,258,699
Ensembl chrNW_004936558:1,223,114...1,231,479 		JBrowse link
cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eomes eomesodermin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:18,825,969...18,833,179
Ensembl chrNW_004936473:18,825,942...18,833,179 		JBrowse link
G Gcm1 glial cells missing transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10888880) TreeGrafter
MGI		 PMID:10888880 GO_REF:0000118 NCBI chrNW_004936476:7,724,666...7,738,401 JBrowse link
G Krt19 keratin 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11062258) Ensembl
MGI		 PMID:11062258 GO_REF:0000107 NCBI chrNW_004936490:16,440,723...16,444,679
Ensembl chrNW_004936490:16,440,693...16,444,791 		JBrowse link
G Krt8 keratin 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11062258) Ensembl
MGI		 PMID:11062258 GO_REF:0000107 NCBI chrNW_004936512:10,247,049...10,254,748
Ensembl chrNW_004936512:10,246,991...10,254,827 		JBrowse link
G LOC101977702 chorion-specific transcription factor GCMa-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936782:759,274...760,584 JBrowse link
G Stk3 serine/threonine kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19786569) Ensembl
MGI		 PMID:19786569 GO_REF:0000107 NCBI chrNW_004936470:44,159,449...44,436,295
Ensembl chrNW_004936470:44,159,419...44,436,330 		JBrowse link
G Stk4 serine/threonine kinase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19786569) Ensembl
MGI		 PMID:19786569 GO_REF:0000107 NCBI chrNW_004936514:7,686,760...7,784,948
Ensembl chrNW_004936514:7,686,087...7,785,025 		JBrowse link
chorio-allantoic fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp5 bone morphogenetic protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:5,350,870...5,464,561
Ensembl chrNW_004936476:5,350,870...5,464,354 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:71,965...143,940
Ensembl chrNW_004936530:71,920...143,940 		JBrowse link
G Ccn1 cellular communication network factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12446788) Ensembl
MGI		 PMID:12446788 GO_REF:0000107 NCBI chrNW_004936608:152,174...155,123
Ensembl chrNW_004936608:151,838...155,358 		JBrowse link
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 acts_upstream_of_or_within ISO (PMID:10021343) MGI PMID:10021343 NCBI chrNW_004936797:332,962...377,397 JBrowse link
G Erf ETS2 repressor factor acts_upstream_of_or_within ISO (PMID:17502352) MGI PMID:17502352 NCBI chrNW_004936706:255,479...263,154
Ensembl chrNW_004936706:255,407...263,179 		JBrowse link
G Itga4 integrin subunit alpha 4 acts_upstream_of_or_within ISO (PMID:7539359) MGI PMID:7539359 NCBI chrNW_004936509:10,215,283...10,293,653
Ensembl chrNW_004936509:10,215,283...10,292,252 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10090727) Ensembl
MGI		 PMID:10090727 GO_REF:0000107 NCBI chrNW_004936818:453,635...569,194
Ensembl chrNW_004936818:453,635...567,469 		JBrowse link
G Vcam1 vascular cell adhesion molecule 1 acts_upstream_of_or_within ISO (PMID:7530222)
(PMID:7539357)		 MGI PMID:7530222 PMID:7539357 NCBI chrNW_004936748:785,491...802,791
Ensembl chrNW_004936748:785,455...803,048 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO (PMID:11543617) MGI PMID:11543617 NCBI chrNW_004936629:3,869,976...3,907,932
Ensembl chrNW_004936629:3,869,523...3,909,808 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15226444) Ensembl
MGI		 PMID:15226444 GO_REF:0000107 NCBI chrNW_004936495:12,045,679...12,050,737
Ensembl chrNW_004936495:12,045,377...12,051,536 		JBrowse link
convergent extension involved in neural plate elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dvl1 dishevelled segment polarity protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16571627) Ensembl
MGI		 PMID:16571627 GO_REF:0000107 NCBI chrNW_004936737:1,797,348...1,811,043
Ensembl chrNW_004936737:1,797,326...1,810,286 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16571627) Ensembl
MGI		 PMID:16571627 GO_REF:0000107 NCBI chrNW_004936595:520,299...528,361
Ensembl chrNW_004936595:520,548...528,371 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:16571627), (PMID:17229766) MGI PMID:16571627 PMID:17229766 NCBI chrNW_004936740:228,377...242,318
Ensembl chrNW_004936740:228,317...242,601 		JBrowse link
convergent extension involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18257070) Ensembl
MGI		 PMID:18257070 GO_REF:0000107 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017 		JBrowse link
dorsal/ventral neural tube patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15218525) Ensembl
MGI		 PMID:15218525 GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468 		JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18003640)
(PMID:18590716)		 Ensembl
MGI		 PMID:18003640 PMID:18590716 GO_REF:0000107 NCBI chrNW_004936596:2,728,089...2,735,718
Ensembl chrNW_004936596:2,728,114...2,735,317 		JBrowse link
G Foxa1 forkhead box A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23383217) Ensembl
MGI		 PMID:23383217 GO_REF:0000107 NCBI chrNW_004936494:11,529,546...11,535,224
Ensembl chrNW_004936494:11,529,546...11,535,224 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:18590716)
(PMID:9226455)
(PMID:23383217)		 MGI PMID:9226455 PMID:18590716 PMID:23383217 NCBI chrNW_004936620:2,966,341...2,969,349
Ensembl chrNW_004936620:2,966,341...2,969,349 		JBrowse link
G Gli2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18590716), (PMID:19286674)
(PMID:9247260)		 Ensembl
MGI		 PMID:9247260 PMID:18590716 PMID:19286674 GO_REF:0000107 NCBI chrNW_004936469:49,616,552...49,788,760
Ensembl chrNW_004936469:49,617,095...49,673,213 		JBrowse link
G Gsc goosecoid homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9226455) Ensembl
MGI		 PMID:9226455 GO_REF:0000107 NCBI chrNW_004936846:286,429...288,405
Ensembl chrNW_004936846:286,420...288,405 		JBrowse link
G Kif3a kinesin family member 3A involved_in
acts_upstream_of_or_within		 ISO (MGI:4888042|PMID:21209331)
(PMID:18590716), (PMID:19286674)		 BHF-UCL
MGI		 PMID:18590716 PMID:19286674 PMID:21209331 MGI:4888042 NCBI chrNW_004936647:2,461,017...2,502,550
Ensembl chrNW_004936647:2,461,138...2,501,871 		JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO (PMID:18590716) MGI PMID:18590716 NCBI chrNW_004936797:618,696...623,219 JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within ISO (PMID:18590716) MGI PMID:18590716 NCBI chrNW_004936474:5,045,284...5,131,859
Ensembl chrNW_004936474:5,045,284...5,131,859 		JBrowse link
G Psen1 presenilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10557208) Ensembl
MGI		 PMID:10557208 GO_REF:0000107 NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065 		JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO (PMID:10557208) MGI PMID:10557208 NCBI chrNW_004936526:3,584,194...3,611,719
Ensembl chrNW_004936526:3,584,188...3,614,074 		JBrowse link
G Ptch1 patched 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9262482) Ensembl
MGI		 PMID:9262482 GO_REF:0000107 NCBI chrNW_004936626:4,241,993...4,301,919
Ensembl chrNW_004936626:4,241,908...4,309,476 		JBrowse link
G Rab23 RAB23, member RAS oncogene family involved_in ISO (MGI:69552|PMID:7720556) UniProt PMID:7720556 MGI:69552 NCBI chrNW_004936476:4,095,829...4,127,714
Ensembl chrNW_004936476:4,095,329...4,127,701 		JBrowse link
G Rnf220 ring finger protein 220 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30177510) Ensembl
MGI		 PMID:30177510 GO_REF:0000107 NCBI chrNW_004936474:25,678,672...25,894,337
Ensembl chrNW_004936474:25,678,667...25,897,665 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17504941)
(PMID:17442700), (PMID:18590716)		 Ensembl
MGI		 PMID:17442700 PMID:17504941 PMID:18590716 GO_REF:0000107 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18590716) Ensembl
MGI		 PMID:18590716 GO_REF:0000107 NCBI chrNW_004936579:5,893,064...5,917,021
Ensembl chrNW_004936579:5,892,542...5,917,281 		JBrowse link
G Tctn1 tectonic family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16357211) Ensembl
MGI		 PMID:16357211 GO_REF:0000107 NCBI chrNW_004936558:3,552,909...3,581,212
Ensembl chrNW_004936558:3,552,864...3,581,368 		JBrowse link
G Tulp3 TUB like protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19286674) Ensembl
MGI		 PMID:19286674 GO_REF:0000107 NCBI chrNW_004936606:3,209,170...3,278,809
Ensembl chrNW_004936606:3,209,141...3,278,563 		JBrowse link
G Wnt3a Wnt family member 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8299937) Ensembl
MGI		 PMID:8299937 GO_REF:0000107 NCBI chrNW_004936864:150,742...179,205
Ensembl chrNW_004936864:150,732...192,423 		JBrowse link
embryonic cranial skeleton morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9268572) Ensembl
MGI		 PMID:9268572 GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468 		JBrowse link
G Dlx2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7590232) Ensembl
MGI		 PMID:7590232 GO_REF:0000107 NCBI chrNW_004936509:2,262,873...2,265,391
Ensembl chrNW_004936509:2,262,873...2,265,391 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:4,148,401...4,160,290
Ensembl chrNW_004936594:4,147,685...4,160,293 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:10,506,680...10,606,272
Ensembl chrNW_004936486:10,507,097...10,602,019 		JBrowse link
G Foxc2 forkhead box C2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9106663) Ensembl
MGI		 PMID:9106663 GO_REF:0000107 NCBI chrNW_004936641:2,236,224...2,238,501
Ensembl chrNW_004936641:2,236,873...2,238,375 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21377456) Ensembl
MGI		 PMID:21377456 GO_REF:0000107 NCBI chrNW_004936470:41,856,683...41,961,666
Ensembl chrNW_004936470:41,859,035...42,002,844 		JBrowse link
G Ift140 intraflagellar transport 140 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23469164) Ensembl
MGI		 PMID:23469164 GO_REF:0000107 NCBI chrNW_004936694:2,344,448...2,419,396
Ensembl chrNW_004936694:2,344,283...2,423,520 		JBrowse link
G Irx5 iroquois homeobox 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:7,354,273...7,358,328
Ensembl chrNW_004936475:7,354,642...7,358,553 		JBrowse link
G LOC101971027 neuroendocrine secretory protein 55 acts_upstream_of_or_within ISO (PMID:15797856) MGI PMID:15797856 NCBI chrNW_004936530:1,353,432...1,407,437 JBrowse link
G Mmp14 matrix metallopeptidase 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18022611) Ensembl
MGI		 PMID:18022611 GO_REF:0000107 NCBI chrNW_004936722:1,447,189...1,457,632
Ensembl chrNW_004936722:1,447,335...1,457,611 		JBrowse link
G Mmp16 matrix metallopeptidase 16 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18022611) Ensembl
MGI		 PMID:18022611 GO_REF:0000107 NCBI chrNW_004936544:2,297,698...2,546,683
Ensembl chrNW_004936544:2,298,028...2,546,689 		JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19763162) Ensembl
MGI		 PMID:19763162 GO_REF:0000107 NCBI chrNW_004936518:4,870,686...5,041,099
Ensembl chrNW_004936518:4,869,546...4,969,450 		JBrowse link
G Nodal nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11311163) Ensembl
MGI		 PMID:11311163 GO_REF:0000107 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705 		JBrowse link
G Pax5 paired box 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23349049) Ensembl
MGI		 PMID:23349049 GO_REF:0000107 NCBI chrNW_004936524:4,700,815...4,887,035
Ensembl chrNW_004936524:4,700,841...4,887,106 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936482:16,804,129...16,853,539
Ensembl chrNW_004936482:16,807,569...16,853,587 		JBrowse link
G Prrx1 paired related homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9729491)
(PMID:7758948)		 Ensembl
MGI		 PMID:7758948 PMID:9729491 GO_REF:0000107 NCBI chrNW_004936481:16,208,243...16,272,836
Ensembl chrNW_004936481:16,205,240...16,272,850 		JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15030764) Ensembl
MGI		 PMID:15030764 GO_REF:0000107 NCBI chrNW_004936476:14,695,965...14,818,246
Ensembl chrNW_004936476:14,695,965...14,905,157 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20133625) Ensembl
MGI		 PMID:20133625 GO_REF:0000107 NCBI chrNW_004936596:795,940...898,823
Ensembl chrNW_004936596:796,601...883,373 		JBrowse link
G Six1 SIX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20515681) Ensembl
MGI		 PMID:20515681 GO_REF:0000107 NCBI chrNW_004936495:4,839,496...4,842,906
Ensembl chrNW_004936495:4,838,051...4,842,994 		JBrowse link
G Six2 SIX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20515681) Ensembl
MGI		 PMID:20515681 GO_REF:0000107 NCBI chrNW_004936508:7,047,563...7,051,129
Ensembl chrNW_004936508:7,047,304...7,051,732 		JBrowse link
G Six4 SIX homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20515681) Ensembl
MGI		 PMID:20515681 GO_REF:0000107 NCBI chrNW_004936495:4,887,718...4,900,198
Ensembl chrNW_004936495:4,887,718...4,900,198 		JBrowse link
G Slc39a1 solute carrier family 39 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16652366) Ensembl
MGI		 PMID:16652366 GO_REF:0000107 NCBI chrNW_004936580:3,704,738...3,708,671
Ensembl chrNW_004936580:3,704,723...3,708,677 		JBrowse link
G Slc39a3 solute carrier family 39 member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16652366) Ensembl
MGI		 PMID:16652366 GO_REF:0000107 NCBI chrNW_004936588:1,583,884...1,590,656
Ensembl chrNW_004936588:1,584,061...1,588,983 		JBrowse link
G Smad2 SMAD family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15183723) Ensembl
MGI		 PMID:15183723 GO_REF:0000107 NCBI chrNW_004936497:14,723,199...14,812,160
Ensembl chrNW_004936497:14,723,199...14,801,697 		JBrowse link
G Smad3 SMAD family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15183723) Ensembl
MGI		 PMID:15183723 GO_REF:0000107 NCBI chrNW_004936471:27,080,662...27,185,861
Ensembl chrNW_004936471:27,080,575...27,189,793 		JBrowse link
G Tbx1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:15190012) MGI PMID:15190012 NCBI chrNW_004936619:3,662,567...3,670,470
Ensembl chrNW_004936619:3,664,468...3,670,525 		JBrowse link
G Tbx15 T-box transcription factor 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728667) Ensembl
MGI		 PMID:15728667 GO_REF:0000107 NCBI chrNW_004936627:3,745,399...3,852,861
Ensembl chrNW_004936627:3,745,287...3,853,309 		JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in
acts_upstream_of_or_within		 ISO (MGI:80519|PMID:8622766)
(PMID:8622765)		 UniProt
MGI		 PMID:8622765 PMID:8622766 MGI:80519 NCBI chrNW_004936534:2,481,804...2,518,573
Ensembl chrNW_004936534:2,481,806...2,499,317 		JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16806156) Ensembl
MGI		 PMID:16806156 GO_REF:0000107 NCBI chrNW_004936524:7,656,523...7,680,043
Ensembl chrNW_004936524:7,655,847...7,681,097 		JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15030764) Ensembl
MGI		 PMID:15030764 GO_REF:0000107 NCBI chrNW_004936546:5,331,220...5,332,669
Ensembl chrNW_004936546:5,331,863...5,332,555 		JBrowse link
G Twist2 twist family bHLH transcription factor 2 acts_upstream_of_or_within ISO (PMID:15030764) MGI PMID:15030764 NCBI chrNW_004936745:2,067,272...2,067,948
Ensembl chrNW_004936745:2,028,286...2,067,948 		JBrowse link
G Wdr19 WD repeat domain 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22228095) Ensembl
MGI		 PMID:22228095 GO_REF:0000107 NCBI chrNW_004936482:6,863,592...6,937,810
Ensembl chrNW_004936482:6,863,571...6,937,979 		JBrowse link
G Wnt9b Wnt family member 9B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16054034)
(PMID:16998816)		 Ensembl
MGI		 PMID:16054034 PMID:16998816 GO_REF:0000107 NCBI chrNW_004936541:1,899,039...1,939,561
Ensembl chrNW_004936541:1,899,039...1,939,561 		JBrowse link
embryonic neurocranium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27395007) Ensembl
MGI		 PMID:27395007 GO_REF:0000107 NCBI chrNW_004936600:4,004,847...4,010,626
Ensembl chrNW_004936600:4,004,824...4,010,689 		JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within ISO (PMID:27395007) MGI PMID:27395007 NCBI chrNW_004936664:3,596,764...3,601,676
Ensembl chrNW_004936664:3,596,952...3,601,342 		JBrowse link
G Gli3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27395007) Ensembl
MGI		 PMID:27395007 GO_REF:0000107 NCBI chrNW_004936478:17,129,922...17,403,630
Ensembl chrNW_004936478:17,126,911...17,403,011 		JBrowse link
G Hoxa1 homeobox A1 involved_in ISO (PMID:16155570) DFLAT PMID:16155570 NCBI chrNW_004936478:3,721,662...3,724,471
Ensembl chrNW_004936478:3,721,662...3,724,433 		JBrowse link
G Med12 mediator complex subunit 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20589884) Ensembl
MGI		 PMID:20589884 GO_REF:0000107 NCBI chrNW_004936762:460,342...483,264
Ensembl chrNW_004936762:460,342...483,195 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:3,877,423...4,060,129
Ensembl chrNW_004936489:3,876,680...4,051,933 		JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16020517) Ensembl
MGI		 PMID:16020517 GO_REF:0000107 NCBI chrNW_004936504:4,413,549...4,495,933
Ensembl chrNW_004936504:4,413,549...4,454,109 		JBrowse link
G Tgfb2 transforming growth factor beta 2 ISO RGD PMID:11002343 RGD:1579866 NCBI chrNW_004936628:310,720...394,002
Ensembl chrNW_004936628:308,691...394,007 		JBrowse link
G Tgfb3 transforming growth factor beta 3 ISO RGD PMID:11002343 RGD:1579866 NCBI chrNW_004936488:4,986,712...5,008,728
Ensembl chrNW_004936488:4,986,748...5,008,496 		JBrowse link
G Tulp3 TUB like protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19286674) Ensembl
MGI		 PMID:19286674 GO_REF:0000107 NCBI chrNW_004936606:3,209,170...3,278,809
Ensembl chrNW_004936606:3,209,141...3,278,563 		JBrowse link
embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arnt aryl hydrocarbon receptor nuclear translocator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16287860) Ensembl
MGI		 PMID:16287860 GO_REF:0000107 NCBI chrNW_004936580:1,038,420...1,093,319
Ensembl chrNW_004936580:1,036,973...1,082,984 		JBrowse link
G Bptf bromodomain PHD finger transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18794365) Ensembl
MGI		 PMID:18794365 GO_REF:0000107 NCBI chrNW_004936541:5,261,899...5,396,930
Ensembl chrNW_004936541:5,262,773...5,395,519 		JBrowse link
G Cebpa CCAAT enhancer binding protein alpha acts_upstream_of_or_within ISO (PMID:15509779) MGI PMID:15509779 NCBI chrNW_004936570:2,513,561...2,516,213 JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16579983) Ensembl
MGI		 PMID:16579983 GO_REF:0000107 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735 		JBrowse link
G Csf2 colony stimulating factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19228596) Ensembl
MGI		 PMID:19228596 GO_REF:0000107 NCBI chrNW_004936647:3,081,896...3,083,864
Ensembl chrNW_004936647:3,081,896...3,083,864 		JBrowse link
G Egfr epidermal growth factor receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7618084) Ensembl
MGI		 PMID:7618084 GO_REF:0000107 NCBI chrNW_004936678:365,005...560,546
Ensembl chrNW_004936678:365,834...436,528 		JBrowse link
G Epas1 endothelial PAS domain protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16287860) Ensembl
MGI		 PMID:16287860 GO_REF:0000107 NCBI chrNW_004936508:5,855,748...5,938,879
Ensembl chrNW_004936508:5,855,732...5,938,856 		JBrowse link
G Esrrb estrogen related receptor beta acts_upstream_of_or_within ISO (PMID:9285590) MGI PMID:9285590 NCBI chrNW_004936488:5,350,133...5,452,366
Ensembl chrNW_004936488:5,292,466...5,454,689 		JBrowse link
G Foxd3 forkhead box D3 acts_upstream_of_or_within ISO (PMID:16039639) MGI PMID:16039639 NCBI chrNW_004936692:951,394...953,612
Ensembl chrNW_004936692:951,562...953,001 		JBrowse link
G Gata2 GATA binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9043071) Ensembl
MGI		 PMID:9043071 GO_REF:0000107 NCBI chrNW_004936798:406,258...414,785
Ensembl chrNW_004936798:406,258...414,931 		JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (PMID:24855001) MGI PMID:24855001 NCBI chrNW_004936494:5,761,801...5,853,673
Ensembl chrNW_004936494:5,758,347...5,851,952 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16287860) Ensembl
MGI		 PMID:16287860 GO_REF:0000107 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157 		JBrowse link
G Hsf1 heat shock transcription factor 1 acts_upstream_of_or_within ISO (PMID:10545106) MGI PMID:10545106 NCBI chrNW_004936470:7,927,734...7,950,805
Ensembl chrNW_004936470:7,928,095...7,933,337 		JBrowse link
G Igf2 insulin like growth factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936816:972,902...981,232
Ensembl chrNW_004936816:972,282...979,167 		JBrowse link
G Med1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14500757) Ensembl
MGI		 PMID:14500757 GO_REF:0000107 NCBI chrNW_004936490:14,625,201...14,663,184
Ensembl chrNW_004936490:14,625,897...14,657,802 		JBrowse link
G Nodal nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11456449) Ensembl
MGI		 PMID:11456449 GO_REF:0000107 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705 		JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in ISO (MGI:3039044|PMID:15084468) UniProt PMID:15084468 MGI:3039044 NCBI chrNW_004936492:2,353,840...2,368,573
Ensembl chrNW_004936492:2,353,841...2,368,573 		JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:1,923,383...1,958,160
Ensembl chrNW_004936694:1,930,621...1,957,179 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16301212) Ensembl
MGI		 PMID:16301212 GO_REF:0000107 NCBI chrNW_004936905:76,781...128,995 JBrowse link
G Prdm1 PR/SET domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15750184) Ensembl
MGI		 PMID:15750184 GO_REF:0000107 NCBI chrNW_004936564:2,594,362...2,690,680
Ensembl chrNW_004936564:2,667,660...2,690,683 		JBrowse link
G Rtl1 retrotransposon Gag like 1 acts_upstream_of_or_within ISO (PMID:26138477)
(PMID:28111885)		 MGI PMID:26138477 PMID:28111885 NCBI chrNW_004936604:4,648,928...4,655,418 JBrowse link
G Slc8a1 solute carrier family 8 member A1 acts_upstream_of_or_within ISO (PMID:21302256) MGI PMID:21302256 NCBI chrNW_004936508:10,894,918...11,256,084
Ensembl chrNW_004936508:10,968,656...11,253,070 		JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO (PMID:17584888) MGI PMID:17584888 NCBI chrNW_004936512:10,655,116...10,693,025
Ensembl chrNW_004936512:10,655,349...10,693,042 		JBrowse link
G Sp3 Sp3 transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17584888) Ensembl
MGI		 PMID:17584888 GO_REF:0000107 NCBI chrNW_004936509:3,740,393...3,782,873
Ensembl chrNW_004936509:3,741,836...3,793,136 		JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15964823) Ensembl
MGI		 PMID:15964823 GO_REF:0000107 NCBI chrNW_004936471:4,238,883...4,251,291
Ensembl chrNW_004936471:4,238,845...4,251,350 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:667,960...669,367
Ensembl chrNW_004936842:667,936...669,441 		JBrowse link
G Tfeb transcription factor EB involved_in ISO (MGI:1306865|PMID:9806910) UniProt PMID:9806910 MGI:1306865 NCBI chrNW_004936476:18,189,096...18,233,622
Ensembl chrNW_004936476:18,189,041...18,233,701 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20178780) Ensembl
MGI		 PMID:20178780 GO_REF:0000107 NCBI chrNW_004936558:1,223,114...1,258,699
Ensembl chrNW_004936558:1,223,114...1,231,479 		JBrowse link
G Ttpa alpha tocopherol transfer protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16014812) Ensembl
MGI		 PMID:16014812 GO_REF:0000107 NCBI chrNW_004936496:10,409,948...10,466,722
Ensembl chrNW_004936496:10,454,605...10,465,301 		JBrowse link
embryonic placenta morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1c cyclin dependent kinase inhibitor 1C acts_upstream_of_or_within ISO (PMID:19276117) MGI PMID:19276117 NCBI chrNW_004936794:1,023,891...1,025,470 JBrowse link
G Igf2 insulin like growth factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936816:972,902...981,232
Ensembl chrNW_004936816:972,282...979,167 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20133625) Ensembl
MGI		 PMID:20133625 GO_REF:0000107 NCBI chrNW_004936596:795,940...898,823
Ensembl chrNW_004936596:796,601...883,373 		JBrowse link
G Trim28 tripartite motif containing 28 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22110054) Ensembl
MGI		 PMID:22110054 GO_REF:0000107 NCBI chrNW_004937062:126,832...132,938
Ensembl chrNW_004937062:126,708...134,366 		JBrowse link
G Vcam1 vascular cell adhesion molecule 1 acts_upstream_of_or_within ISO (PMID:7530222) MGI PMID:7530222 NCBI chrNW_004936748:785,491...802,791
Ensembl chrNW_004936748:785,455...803,048 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO (PMID:11543617) MGI PMID:11543617 NCBI chrNW_004936629:3,869,976...3,907,932
Ensembl chrNW_004936629:3,869,523...3,909,808 		JBrowse link
embryonic skeletal joint development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21185280) Ensembl
MGI		 PMID:21185280 GO_REF:0000107 NCBI chrNW_004936470:28,303,213...28,566,470
Ensembl chrNW_004936470:28,303,828...28,566,118 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17191253) Ensembl
MGI		 PMID:17191253 GO_REF:0000107 NCBI chrNW_004936569:1,474,693...1,480,562
Ensembl chrNW_004936569:1,474,665...1,480,568 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:11,888,024...11,895,058
Ensembl chrNW_004936493:11,888,024...11,895,058 		JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:44,024,497...44,032,429
Ensembl chrNW_004936470:44,024,439...44,032,429 		JBrowse link
G Slc2a10 solute carrier family 2 member 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18565096) ARUK-UCL
Ensembl		 PMID:18565096 GO_REF:0000107 NCBI chrNW_004936514:6,490,728...6,504,152
Ensembl chrNW_004936514:6,493,512...6,497,063 		JBrowse link
embryonic skeletal joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin1 axin 1 acts_upstream_of_or_within ISO MGI MGI:48782 NCBI chrNW_004936501:599,963...633,837
Ensembl chrNW_004936501:599,919...633,873 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9664686) Ensembl
MGI		 PMID:9664686 GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9664686) Ensembl
MGI		 PMID:9664686 GO_REF:0000107 NCBI chrNW_004936530:71,965...143,940
Ensembl chrNW_004936530:71,920...143,940 		JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:5,861,933...5,894,898
Ensembl chrNW_004936512:5,861,933...5,892,853 		JBrowse link
G Hoxa11 homeobox A11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20978074) Ensembl
MGI		 PMID:20978074 GO_REF:0000107 NCBI chrNW_004936478:3,809,288...3,813,014
Ensembl chrNW_004936478:3,809,288...3,813,014 		JBrowse link
G Hoxc11 homeobox C11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20978074) Ensembl
MGI		 PMID:20978074 GO_REF:0000107 NCBI chrNW_004936512:11,194,876...11,197,316
Ensembl chrNW_004936512:11,194,876...11,197,316 		JBrowse link
G Hyal1 hyaluronidase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18772348) Ensembl
MGI		 PMID:18772348 GO_REF:0000107 NCBI chrNW_004936529:1,838,212...1,842,399
Ensembl chrNW_004936529:1,838,676...1,841,188 		JBrowse link
G Nog noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:11,888,024...11,895,058
Ensembl chrNW_004936493:11,888,024...11,895,058 		JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:44,024,497...44,032,429
Ensembl chrNW_004936470:44,024,439...44,032,429 		JBrowse link
G Shox2 SHOX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18514492) Ensembl
MGI		 PMID:18514492 GO_REF:0000107 NCBI chrNW_004936519:4,810,777...4,818,733
Ensembl chrNW_004936519:4,809,687...4,818,792 		JBrowse link
embryonic skeletal limb joint morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:11,888,024...11,895,058
Ensembl chrNW_004936493:11,888,024...11,895,058 		JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:44,024,497...44,032,429
Ensembl chrNW_004936470:44,024,439...44,032,429 		JBrowse link
embryonic skeletal system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2a activin A receptor type 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7885474) Ensembl
MGI		 PMID:7885474 GO_REF:0000107 NCBI chrNW_004936469:29,195,329...29,273,237
Ensembl chrNW_004936469:29,194,908...29,273,196 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11290297) Ensembl
MGI		 PMID:11290297 GO_REF:0000107 NCBI chrNW_004936520:5,707,542...5,716,966
Ensembl chrNW_004936520:5,707,778...5,717,024 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16712836) Ensembl
MGI		 PMID:16712836 GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468 		JBrowse link
G Cdk20 cyclin dependent kinase 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28817564) Ensembl
MGI		 PMID:28817564 GO_REF:0000107 NCBI chrNW_004936854:810,996...817,136
Ensembl chrNW_004936854:812,575...817,202 		JBrowse link
G Col1a1 collagen type I alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:11,448,552...11,465,836
Ensembl chrNW_004936490:11,448,654...11,464,444 		JBrowse link
G Deaf1 DEAF1 transcription factor involved_in ISO (MGI:3029622|PMID:14966286) UniProt PMID:14966286 MGI:3029622 NCBI chrNW_004936888:473,651...497,152
Ensembl chrNW_004936888:473,974...497,158 		JBrowse link
G Dlk1 delta like non-canonical Notch ligand 1 acts_upstream_of_or_within ISO (PMID:19247431) MGI PMID:19247431 NCBI chrNW_004936604:4,504,519...4,511,897
Ensembl chrNW_004936604:4,504,503...4,511,910 		JBrowse link
G Dlx1 distal-less homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9187081) Ensembl
MGI		 PMID:9187081 GO_REF:0000107 NCBI chrNW_004936509:2,248,181...2,250,991
Ensembl chrNW_004936509:2,248,181...2,250,991 		JBrowse link
G Dlx2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9187081) Ensembl
MGI		 PMID:9187081 GO_REF:0000107 NCBI chrNW_004936509:2,262,873...2,265,391
Ensembl chrNW_004936509:2,262,873...2,265,391 		JBrowse link
G Dmrt2 doublesex and mab-3 related transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16387292) Ensembl
MGI		 PMID:16387292 GO_REF:0000107 NCBI chrNW_004936503:3,857,165...3,864,130
Ensembl chrNW_004936503:3,857,165...3,864,147 		JBrowse link
G Ednra endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:1,950,117...2,005,786
Ensembl chrNW_004936535:1,949,941...2,005,910 		JBrowse link
G Fgf9 fibroblast growth factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17544391) Ensembl
MGI		 PMID:17544391 GO_REF:0000107 NCBI chrNW_004936720:282,291...316,629
Ensembl chrNW_004936720:279,521...316,674 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936516:4,692,926...4,695,625
Ensembl chrNW_004936516:4,692,926...4,695,632 		JBrowse link
G Hoxa2 homeobox A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:3,729,079...3,731,353
Ensembl chrNW_004936478:3,729,107...3,730,870 		JBrowse link
G Hoxa3 homeobox A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7913519) Ensembl
MGI		 PMID:7913519 GO_REF:0000107 NCBI chrNW_004936478:3,735,509...3,767,899
Ensembl chrNW_004936478:3,735,505...3,767,899 		JBrowse link
G Hoxa5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17626057) Ensembl
MGI
UniProt		 PMID:17626057 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936478:3,768,757...3,771,850
Ensembl chrNW_004936478:3,769,258...3,771,840 		JBrowse link
G Hoxa6 homeobox A6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17626057) Ensembl
MGI
UniProt		 PMID:17626057 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936478:3,773,131...3,775,461
Ensembl chrNW_004936478:3,772,773...3,775,707 		JBrowse link
G Hoxa7 homeobox A7 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936478:3,782,476...3,784,361
Ensembl chrNW_004936478:3,782,482...3,784,361 		JBrowse link
G Hoxa9 homeobox A9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8625797)
(PMID:17626057)
(PMID:9013929)		 Ensembl
MGI		 PMID:8625797 PMID:9013929 PMID:17626057 GO_REF:0000107 NCBI chrNW_004936478:3,789,961...3,793,116
Ensembl chrNW_004936478:3,789,961...3,793,845 		JBrowse link
G Hoxb5 homeobox B5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17626057) Ensembl
MGI
UniProt		 PMID:17626057 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936490:12,793,485...12,796,219
Ensembl chrNW_004936490:12,793,485...12,796,219 		JBrowse link
G Hoxb6 homeobox B6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17626057)
(PMID:7828847)		 Ensembl
MGI
UniProt		 PMID:7828847 PMID:17626057 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936490:12,782,864...12,791,743
Ensembl chrNW_004936490:12,789,173...12,791,759 		JBrowse link
G Hoxb9 homeobox B9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17626057)
(PMID:9013929)
(PMID:10885747)		 Ensembl
MGI		 PMID:9013929 PMID:10885747 PMID:17626057 GO_REF:0000107 NCBI chrNW_004936490:12,761,668...12,765,658
Ensembl chrNW_004936490:12,761,522...12,766,657 		JBrowse link
G Hoxc5 homeobox C5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17626057) Ensembl
MGI
UniProt		 PMID:17626057 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936512:11,254,959...11,258,702
Ensembl chrNW_004936512:11,254,942...11,258,702 		JBrowse link
G Hoxc6 homeobox C6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17626057) Ensembl
MGI
UniProt		 PMID:17626057 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936512:11,238,905...11,252,750
Ensembl chrNW_004936512:11,250,326...11,252,750 		JBrowse link
G Hoxc9 homeobox C9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17626057) Ensembl
MGI		 PMID:17626057 GO_REF:0000107 NCBI chrNW_004936512:11,222,120...11,225,455
Ensembl chrNW_004936512:11,217,547...11,225,455 		JBrowse link
G Hoxd1 homeobox D1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11511348) Ensembl
MGI		 PMID:11511348 GO_REF:0000107 NCBI chrNW_004936509:5,673,184...5,674,636
Ensembl chrNW_004936509:5,673,184...5,674,521 		JBrowse link
G Hoxd9 homeobox D9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8625797)
(PMID:17626057)		 Ensembl
MGI		 PMID:8625797 PMID:17626057 GO_REF:0000107 NCBI chrNW_004936509:5,609,744...5,611,943
Ensembl chrNW_004936509:5,609,744...5,611,943 		JBrowse link
G Hsd17b7 hydroxysteroid 17-beta dehydrogenase 7 acts_upstream_of_or_within ISO (PMID:21515572) MGI PMID:21515572 NCBI chrNW_004936831:951,603...976,159
Ensembl chrNW_004936831:951,562...977,208 		JBrowse link
G Kiaa1217 KIAA1217 ortholog involved_in ISO (MGI:3614233|PMID:16204209) UniProt PMID:16204209 MGI:3614233 NCBI chrNW_004936484:33,125...319,136
Ensembl chrNW_004936484:33,086...319,307 		JBrowse link
G LOC101955357 uncharacterized LOC101955357 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936862:405,205...413,920
Ensembl chrNW_004936862:404,476...413,561 		JBrowse link
G Mbtd1 mbt domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21252303) Ensembl
MGI		 PMID:21252303 GO_REF:0000107 NCBI chrNW_004936490:10,567,146...10,633,130
Ensembl chrNW_004936490:10,587,010...10,630,049 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21045211) Ensembl
MGI		 PMID:21045211 GO_REF:0000107 NCBI chrNW_004936490:4,865,243...4,876,601
Ensembl chrNW_004936490:4,865,243...4,878,912 		JBrowse link
G Mosmo modulator of smoothened acts_upstream_of_or_within ISO (PMID:34486668) MGI PMID:34486668 NCBI chrNW_004936501:6,981,331...7,047,046 JBrowse link
G Nkx3-2 NK3 homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10572046)
(PMID:10449756)		 Ensembl
MGI		 PMID:10449756 PMID:10572046 GO_REF:0000107 NCBI chrNW_004936477:13,999,045...14,001,659
Ensembl chrNW_004936477:13,999,045...14,001,659 		JBrowse link
G Nog noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483 		JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within ISO (PMID:8631261) MGI PMID:8631261 NCBI chrNW_004936474:5,045,284...5,131,859
Ensembl chrNW_004936474:5,045,284...5,131,859 		JBrowse link
G Pbx1 PBX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11566859) Ensembl
MGI		 PMID:11566859 GO_REF:0000107 NCBI chrNW_004936481:20,200,236...20,440,623
Ensembl chrNW_004936481:20,203,405...20,440,629 		JBrowse link
G Pcgf2 polycomb group ring finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11290297) Ensembl
MGI		 PMID:11290297 GO_REF:0000107 NCBI chrNW_004936490:14,139,125...14,150,377
Ensembl chrNW_004936490:14,138,980...14,150,756 		JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:11,466,955...11,896,887
Ensembl chrNW_004936503:11,466,950...11,896,887 		JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (MGI:3604178|PMID:15994349) BHF-UCL PMID:15994349 MGI:3604178 NCBI chrNW_004936601:1,401,215...1,410,195
Ensembl chrNW_004936601:1,402,691...1,410,208 		JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:72077|PMID:7743923) UniProt PMID:7743923 MGI:72077 NCBI chrNW_004936470:7,966,096...7,972,379 JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17504941) Ensembl
MGI		 PMID:17504941 GO_REF:0000107 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599 		JBrowse link
G Slc35d1 solute carrier family 35 member D1 acts_upstream_of_or_within ISO (PMID:17952091) MGI PMID:17952091 NCBI chrNW_004936591:4,519,136...4,574,925
Ensembl chrNW_004936591:4,531,403...4,570,631 		JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO (PMID:17584888) MGI PMID:17584888 NCBI chrNW_004936512:10,655,116...10,693,025
Ensembl chrNW_004936512:10,655,349...10,693,042 		JBrowse link
G Sp3 Sp3 transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17584888) Ensembl
MGI		 PMID:17584888 GO_REF:0000107 NCBI chrNW_004936509:3,740,393...3,782,873
Ensembl chrNW_004936509:3,741,836...3,793,136 		JBrowse link
G Sulf1 sulfatase 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936496:4,755,806...4,931,964
Ensembl chrNW_004936496:4,755,754...4,893,027 		JBrowse link
G Sulf2 sulfatase 2 involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936514:5,819,375...5,899,324
Ensembl chrNW_004936514:5,819,400...5,899,316 		JBrowse link
G Tapt1 transmembrane anterior posterior transformation 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17151244) Ensembl
MGI		 PMID:17151244 GO_REF:0000107 NCBI chrNW_004936477:11,777,657...11,823,296
Ensembl chrNW_004936477:11,777,415...11,823,421 		JBrowse link
G Tbxt T-box transcription factor T involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8293872) Ensembl
MGI		 PMID:8293872 GO_REF:0000107 NCBI chrNW_004936489:16,027,359...16,035,041
Ensembl chrNW_004936489:16,027,359...16,035,041 		JBrowse link
G Wnt11 Wnt family member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:4,909,041...4,927,482
Ensembl chrNW_004936498:4,908,978...4,927,165 		JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159 		JBrowse link
G Xylt1 xylosyltransferase 1 involved_in ISO (MGI:5544658|PMID:24161523) UniProt PMID:24161523 MGI:5544658 NCBI chrNW_004936501:4,164,714...4,337,604
Ensembl chrNW_004936501:4,187,213...4,331,783 		JBrowse link
embryonic skeletal system morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx1 ALX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728667), (PMID:9847249) TreeGrafter
MGI		 PMID:9847249 PMID:15728667 GO_REF:0000118 NCBI chrNW_004936507:2,775,752...2,797,065
Ensembl chrNW_004936507:2,775,752...2,797,062 		JBrowse link
G Alx3 ALX homeobox 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11641221), (PMID:15728667) Ensembl
MGI		 PMID:11641221 PMID:15728667 GO_REF:0000107 NCBI chrNW_004936704:1,519,932...1,530,470
Ensembl chrNW_004936704:1,520,639...1,530,470 		JBrowse link
G Alx4 ALX homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11641221)
(PMID:15728667)
(PMID:9847249)		 Ensembl
MGI		 PMID:9847249 PMID:11641221 PMID:15728667 GO_REF:0000107 NCBI chrNW_004936562:4,316,550...4,326,022
Ensembl chrNW_004936562:4,314,870...4,326,000 		JBrowse link
G Asxl2 ASXL transcriptional regulator 2 acts_upstream_of_or_within ISO (PMID:19270745) MGI PMID:19270745 NCBI chrNW_004936493:6,463,771...6,602,244
Ensembl chrNW_004936493:6,463,744...6,594,252 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11290297) Ensembl
MGI		 PMID:11290297 GO_REF:0000107 NCBI chrNW_004936520:5,707,542...5,716,966
Ensembl chrNW_004936520:5,707,778...5,717,024 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16712836) Ensembl
MGI		 PMID:16712836 GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468 		JBrowse link
G Chst11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16079159) Ensembl
MGI		 PMID:16079159 GO_REF:0000107 NCBI chrNW_004936492:9,886,269...10,092,725
Ensembl chrNW_004936492:9,886,254...10,092,221 		JBrowse link
G Col11a1 collagen type XI alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:4100752) Ensembl
MGI		 PMID:4100752 GO_REF:0000107 NCBI chrNW_004936730:466,912...680,823
Ensembl chrNW_004936730:468,039...680,753 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11238884) Ensembl
MGI		 PMID:11238884 GO_REF:0000107 NCBI chrNW_004936833:551,989...843,064
Ensembl chrNW_004936833:551,799...844,121 		JBrowse link
G Dscaml1 DS cell adhesion molecule like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:2,619,910...2,939,578
Ensembl chrNW_004936542:2,620,469...2,939,578 		JBrowse link
G Dync2i1 dynein 2 intermediate chain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936856:724,863...792,490
Ensembl chrNW_004936856:725,076...792,725 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10471511) Ensembl
MGI		 PMID:10471511 GO_REF:0000107 NCBI chrNW_004936648:395,526...546,705
Ensembl chrNW_004936648:395,524...546,729 		JBrowse link
G Flvcr1 FLVCR choline and heme transporter 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23187127) Ensembl
MGI		 PMID:23187127 GO_REF:0000107 NCBI chrNW_004936557:693,445...727,166
Ensembl chrNW_004936557:692,489...726,965 		JBrowse link
G Foxc2 forkhead box C2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9409679) Ensembl
MGI		 PMID:9409679 GO_REF:0000107 NCBI chrNW_004936641:2,236,224...2,238,501
Ensembl chrNW_004936641:2,236,873...2,238,375 		JBrowse link
G Fuz fuzzy planar cell polarity protein involved_in ISO (MGI:4438317|PMID:19767740), (MGI:5296432|PMID:21935430), (MGI:5498583|PMID:23806618) UniProt PMID:19767740 PMID:21935430 PMID:23806618 MGI:4438317 MGI:5296432 MGI:5498583 NCBI chrNW_004936664:3,596,764...3,601,676
Ensembl chrNW_004936664:3,596,952...3,601,342 		JBrowse link
G Gli3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728667) Ensembl
MGI		 PMID:15728667 GO_REF:0000107 NCBI chrNW_004936478:17,129,922...17,403,630
Ensembl chrNW_004936478:17,126,911...17,403,011 		JBrowse link
G Gsc goosecoid homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7555726)
(PMID:7555718)		 Ensembl
MGI		 PMID:7555718 PMID:7555726 GO_REF:0000107 NCBI chrNW_004936846:286,429...288,405
Ensembl chrNW_004936846:286,420...288,405 		JBrowse link
G Hoxa2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15634706) Ensembl
MGI		 PMID:15634706 GO_REF:0000107 NCBI chrNW_004936478:3,729,079...3,731,353
Ensembl chrNW_004936478:3,729,107...3,730,870 		JBrowse link
G Hoxa3 homeobox A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9441667) Ensembl
MGI
TreeGrafter		 PMID:9441667 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936478:3,735,509...3,767,899
Ensembl chrNW_004936478:3,735,505...3,767,899 		JBrowse link
G Hoxa4 homeobox A4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7628700)
(PMID:7918106)		 TreeGrafter
MGI		 PMID:7628700 PMID:7918106 GO_REF:0000118 NCBI chrNW_004936478:3,756,289...3,758,020 JBrowse link
G Hoxa5 homeobox A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7901120), (PMID:9603431)
(PMID:17417799)		 Ensembl
MGI		 PMID:7901120 PMID:9603431 PMID:17417799 GO_REF:0000107 NCBI chrNW_004936478:3,768,757...3,771,850
Ensembl chrNW_004936478:3,769,258...3,771,840 		JBrowse link
G Hoxa7 homeobox A7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9784603) Ensembl
MGI		 PMID:9784603 GO_REF:0000107 NCBI chrNW_004936478:3,782,476...3,784,361
Ensembl chrNW_004936478:3,782,482...3,784,361 		JBrowse link
G Hoxa9 homeobox A9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936478:3,789,961...3,793,116
Ensembl chrNW_004936478:3,789,961...3,793,845 		JBrowse link
G Hoxb1 homeobox B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10885747) Ensembl
MGI		 PMID:10885747 GO_REF:0000107 NCBI chrNW_004936490:12,853,983...12,855,428
Ensembl chrNW_004936490:12,853,983...12,855,428 		JBrowse link
G Hoxb2 homeobox B2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10885747) Ensembl
MGI		 PMID:10885747 GO_REF:0000107 NCBI chrNW_004936490:12,841,286...12,843,782
Ensembl chrNW_004936490:12,841,695...12,843,494 		JBrowse link
G Hoxb3 homeobox B3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9441667)
(PMID:10885747)		 Ensembl
MGI
TreeGrafter		 PMID:9441667 PMID:10885747 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:12,834,240...12,836,812
Ensembl chrNW_004936490:12,834,240...12,836,398 		JBrowse link
G Hoxb4 homeobox B4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10885747)
(PMID:7628700)		 Ensembl
MGI
TreeGrafter		 PMID:7628700 PMID:10885747 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:12,808,679...12,811,688
Ensembl chrNW_004936490:12,808,679...12,811,688 		JBrowse link
G Hoxb5 homeobox B5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7828847)
(PMID:10885747)		 Ensembl
MGI		 PMID:7828847 PMID:10885747 GO_REF:0000107 NCBI chrNW_004936490:12,793,485...12,796,219
Ensembl chrNW_004936490:12,793,485...12,796,219 		JBrowse link
G Hoxb6 homeobox B6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10885747) Ensembl
MGI		 PMID:10885747 GO_REF:0000107 NCBI chrNW_004936490:12,782,864...12,791,743
Ensembl chrNW_004936490:12,789,173...12,791,759 		JBrowse link
G Hoxb7 homeobox B7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10885747)
(PMID:9784603)		 Ensembl
MGI		 PMID:9784603 PMID:10885747 GO_REF:0000107 NCBI chrNW_004936490:12,777,005...12,780,515
Ensembl chrNW_004936490:12,777,020...12,780,522 		JBrowse link
G Hoxb8 homeobox B8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10885747)
(PMID:10559485)		 Ensembl
MGI		 PMID:10559485 PMID:10885747 GO_REF:0000107 NCBI chrNW_004936490:12,773,295...12,774,832
Ensembl chrNW_004936490:12,773,295...12,774,852 		JBrowse link
G Hoxb9 homeobox B9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:12,761,668...12,765,658
Ensembl chrNW_004936490:12,761,522...12,766,657 		JBrowse link
G Hoxc4 homeobox C4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936512:11,238,905...11,277,531
Ensembl chrNW_004936512:11,274,416...11,277,531 		JBrowse link
G Hoxc9 homeobox C9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7547473) Ensembl
MGI
TreeGrafter		 PMID:7547473 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936512:11,222,120...11,225,455
Ensembl chrNW_004936512:11,217,547...11,225,455 		JBrowse link
G Hoxd10 homeobox D10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10642795) Ensembl
MGI		 PMID:10642795 GO_REF:0000107 NCBI chrNW_004936509:5,603,661...5,606,850
Ensembl chrNW_004936509:5,603,642...5,606,850 		JBrowse link
G Hoxd3 homeobox D3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7913519)
(PMID:7910549), (PMID:7913519)		 Ensembl
MGI
TreeGrafter		 PMID:7910549 PMID:7913519 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936509:5,654,737...5,659,937
Ensembl chrNW_004936509:5,651,190...5,659,937 		JBrowse link
G Hoxd4 homeobox D4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7628700)
(PMID:7750651)		 Ensembl
MGI
TreeGrafter		 PMID:7628700 PMID:7750651 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936509:5,637,600...5,640,335
Ensembl chrNW_004936509:5,637,600...5,640,917 		JBrowse link
G Hoxd9 homeobox D9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10642795) Ensembl
MGI
TreeGrafter		 PMID:10642795 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936509:5,609,744...5,611,943
Ensembl chrNW_004936509:5,609,744...5,611,943 		JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO (PMID:10579729) MGI PMID:10579729 NCBI chrNW_004936474:7,407,622...7,478,950
Ensembl chrNW_004936474:7,408,518...7,467,851 		JBrowse link
G Mdfi MyoD family inhibitor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9799236) Ensembl
MGI		 PMID:9799236 GO_REF:0000107 NCBI chrNW_004936476:18,262,662...18,276,159
Ensembl chrNW_004936476:18,263,194...18,275,935 		JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO (PMID:17420000) MGI PMID:17420000 NCBI chrNW_004936469:7,060,480...7,225,497
Ensembl chrNW_004936469:7,060,480...7,204,661 		JBrowse link
G Megf8 multiple EGF like domains 8 involved_in IEA
ISS		 Ensembl
CAFA		 GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936706:157,167...198,071
Ensembl chrNW_004936706:157,019...197,500 		JBrowse link
G Men1 menin 1 acts_upstream_of_or_within ISO (PMID:17927973) MGI PMID:17927973 NCBI chrNW_004936599:4,504,489...4,510,085
Ensembl chrNW_004936599:4,504,397...4,510,555 		JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (PMID:17360777) MGI PMID:17360777 NCBI chrNW_004936493:14,618,176...14,624,201
Ensembl chrNW_004936493:14,618,060...14,624,315 		JBrowse link
G Myf5 myogenic factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10929709) Ensembl
MGI		 PMID:10929709 GO_REF:0000107 NCBI chrNW_004936698:1,609,227...1,611,283
Ensembl chrNW_004936698:1,609,227...1,611,283 		JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15175245) Ensembl
MGI		 PMID:15175245 GO_REF:0000107 NCBI chrNW_004936470:44,024,497...44,032,429
Ensembl chrNW_004936470:44,024,439...44,032,429 		JBrowse link
G Pcgf2 polycomb group ring finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11290297) Ensembl
MGI		 PMID:11290297 GO_REF:0000107 NCBI chrNW_004936490:14,139,125...14,150,377
Ensembl chrNW_004936490:14,138,980...14,150,756 		JBrowse link
G Prrx1 paired related homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7758948)
(PMID:11532916), (PMID:9729491), (PMID:9876178)		 Ensembl
MGI		 PMID:7758948 PMID:9729491 PMID:9876178 PMID:11532916 GO_REF:0000107 NCBI chrNW_004936481:16,208,243...16,272,836
Ensembl chrNW_004936481:16,205,240...16,272,850 		JBrowse link
G Satb2 SATB homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16751105)
(PMID:16960803)		 Ensembl
MGI		 PMID:16751105 PMID:16960803 GO_REF:0000107 NCBI chrNW_004936506:34,968...206,432
Ensembl chrNW_004936506:34,962...206,490 		JBrowse link
G Six1 SIX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15788460) Ensembl
MGI		 PMID:15788460 GO_REF:0000107 NCBI chrNW_004936495:4,839,496...4,842,906
Ensembl chrNW_004936495:4,838,051...4,842,994 		JBrowse link
G Six2 SIX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15634706) Ensembl
MGI		 PMID:15634706 GO_REF:0000107 NCBI chrNW_004936508:7,047,563...7,051,129
Ensembl chrNW_004936508:7,047,304...7,051,732 		JBrowse link
G Six4 SIX homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15788460) Ensembl
MGI		 PMID:15788460 GO_REF:0000107 NCBI chrNW_004936495:4,887,718...4,900,198
Ensembl chrNW_004936495:4,887,718...4,900,198 		JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISO (MGI:3052265|PMID:15254231) UniProt PMID:15254231 MGI:3052265 NCBI chrNW_004937107:203,120...207,185 JBrowse link
G Tbx15 T-box transcription factor 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728667) Ensembl
MGI		 PMID:15728667 GO_REF:0000107 NCBI chrNW_004936627:3,745,399...3,852,861
Ensembl chrNW_004936627:3,745,287...3,853,309 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15030764) Ensembl
MGI		 PMID:15030764 GO_REF:0000107 NCBI chrNW_004936546:5,331,220...5,332,669
Ensembl chrNW_004936546:5,331,863...5,332,555 		JBrowse link
G Wnt9a Wnt family member 9A acts_upstream_of_or_within ISO (PMID:16818445) MGI PMID:16818445 NCBI chrNW_004936864:216,381...245,885
Ensembl chrNW_004936864:239,651...244,312 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9389660) Ensembl
MGI		 PMID:9389660 GO_REF:0000107 NCBI chrNW_004936574:17,643...175,762
Ensembl chrNW_004936574:17,684...178,293 		JBrowse link
embryonic viscerocranium morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16079159) Ensembl
MGI		 PMID:16079159 GO_REF:0000107 NCBI chrNW_004936492:9,886,269...10,092,725
Ensembl chrNW_004936492:9,886,254...10,092,221 		JBrowse link
G Foxc2 forkhead box C2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9409679) Ensembl
MGI		 PMID:9409679 GO_REF:0000107 NCBI chrNW_004936641:2,236,224...2,238,501
Ensembl chrNW_004936641:2,236,873...2,238,375 		JBrowse link
G Hoxa2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16221728) Ensembl
MGI		 PMID:16221728 GO_REF:0000107 NCBI chrNW_004936478:3,729,079...3,731,353
Ensembl chrNW_004936478:3,729,107...3,730,870 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:1,324,378...1,332,177
Ensembl chrNW_004936490:1,324,370...1,331,505 		JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO (PMID:17420000) MGI PMID:17420000 NCBI chrNW_004936469:7,060,480...7,225,497
Ensembl chrNW_004936469:7,060,480...7,204,661 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:3,877,423...4,060,129
Ensembl chrNW_004936489:3,876,680...4,051,933 		JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16020517) Ensembl
MGI		 PMID:16020517 GO_REF:0000107 NCBI chrNW_004936504:4,413,549...4,495,933
Ensembl chrNW_004936504:4,413,549...4,454,109 		JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19763162) Ensembl
MGI
TreeGrafter		 PMID:19763162 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936518:4,870,686...5,041,099
Ensembl chrNW_004936518:4,869,546...4,969,450 		JBrowse link
G Rdh10 retinol dehydrogenase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17473173) Ensembl
MGI		 PMID:17473173 GO_REF:0000107 NCBI chrNW_004936648:2,060,131...2,088,021
Ensembl chrNW_004936648:2,060,125...2,088,833 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in ISO (PMID:14585638) UniProt PMID:14585638 NCBI chrNW_004936619:3,662,567...3,670,470
Ensembl chrNW_004936619:3,664,468...3,670,525 		JBrowse link
epithelial cell morphogenesis involved in placental branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grhl2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25758223) Ensembl
MGI		 PMID:25758223 GO_REF:0000107 NCBI chrNW_004936470:41,856,683...41,961,666
Ensembl chrNW_004936470:41,859,035...42,002,844 		JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19592578) Ensembl
MGI		 PMID:19592578 GO_REF:0000107 NCBI chrNW_004936801:1,041,946...1,069,617
Ensembl chrNW_004936801:1,041,708...1,069,776 		JBrowse link
G St14 ST14 transmembrane serine protease matriptase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19592578) Ensembl
MGI		 PMID:19592578 GO_REF:0000107 NCBI chrNW_004936572:2,137,820...2,182,674
Ensembl chrNW_004936572:2,137,332...2,182,742 		JBrowse link
establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cthrc1 collagen triple helix repeat containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18606138) Ensembl
MGI		 PMID:18606138 GO_REF:0000107 NCBI chrNW_004936470:40,381,215...40,392,105
Ensembl chrNW_004936470:40,377,835...40,392,225 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:18606138) MGI PMID:18606138 NCBI chrNW_004936740:228,377...242,318
Ensembl chrNW_004936740:228,317...242,601 		JBrowse link
floor plate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cby1 chibby 1, beta catenin antagonist involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29487109) Ensembl
MGI		 PMID:29487109 GO_REF:0000107 NCBI chrNW_004936492:2,677,502...2,681,845
Ensembl chrNW_004936492:2,677,502...2,681,511 		JBrowse link
G Cobl cordon-bleu WH2 repeat protein involved_in ISO (MGI:76306|PMID:7586755) BHF-UCL PMID:7586755 MGI:76306 NCBI chrNW_004936686:621,502...872,824 JBrowse link
G Dzip1l DAZ interacting zinc finger protein 1 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29487109) Ensembl
MGI		 PMID:29487109 GO_REF:0000107 NCBI chrNW_004936540:437,638...469,945
Ensembl chrNW_004936540:436,161...469,951 		JBrowse link
G Ferd3l Fer3 like bHLH transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20460368) Ensembl
MGI		 PMID:20460368 GO_REF:0000107 NCBI chrNW_004936546:5,358,006...5,358,652
Ensembl chrNW_004936546:5,358,097...5,358,603 		JBrowse link
G Foxb1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:20,934,524...20,935,584
Ensembl chrNW_004936471:20,934,580...20,935,557 		JBrowse link
G Stil STIL centriolar assembly protein acts_upstream_of_or_within ISO (PMID:10385121) MGI PMID:10385121 NCBI chrNW_004936474:28,079,114...28,131,214
Ensembl chrNW_004936474:28,079,492...28,131,198 		JBrowse link
floor plate formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk20 cyclin dependent kinase 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28817564) Ensembl
MGI		 PMID:28817564 GO_REF:0000107 NCBI chrNW_004936854:810,996...817,136
Ensembl chrNW_004936854:812,575...817,202 		JBrowse link
G Cluap1 clusterin associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23351563) Ensembl
MGI		 PMID:23351563 GO_REF:0000107 NCBI chrNW_004936694:779,399...810,534
Ensembl chrNW_004936694:780,197...810,457 		JBrowse link
G Gli2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9636069), (PMID:9655799) Ensembl
MGI		 PMID:9636069 PMID:9655799 GO_REF:0000107 NCBI chrNW_004936469:49,616,552...49,788,760
Ensembl chrNW_004936469:49,617,095...49,673,213 		JBrowse link
floor plate morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nodal nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11311163) Ensembl
MGI		 PMID:11311163 GO_REF:0000107 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705 		JBrowse link
forebrain-midbrain boundary formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9169845) Ensembl
MGI		 PMID:9169845 GO_REF:0000107 NCBI chrNW_004936533:5,952,529...5,980,889
Ensembl chrNW_004936533:5,957,971...5,982,075 		JBrowse link
glycogen cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12783884) Ensembl
MGI		 PMID:12783884 GO_REF:0000107 NCBI chrNW_004936621:620,163...639,115
Ensembl chrNW_004936621:620,074...639,093 		JBrowse link
in utero embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15037318)
(PMID:17117439)
(PMID:14729481)		 Ensembl
MGI		 PMID:14729481 PMID:15037318 PMID:17117439 GO_REF:0000107 NCBI chrNW_004936469:20,743,195...20,811,567
Ensembl chrNW_004936469:20,743,213...20,811,569 		JBrowse link
G Acvr1b activin A receptor type 1B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15485907), (PMID:16564040) Ensembl
MGI		 PMID:15485907 PMID:16564040 GO_REF:0000107 NCBI chrNW_004936512:9,407,578...9,449,611
Ensembl chrNW_004936512:9,407,581...9,449,632 		JBrowse link
G Acvr1c activin A receptor type 1C NOT|acts_upstream_of_or_within ISO (PMID:15485907) MGI PMID:15485907 NCBI chrNW_004936469:20,892,715...20,964,674
Ensembl chrNW_004936469:20,892,466...20,960,098 		JBrowse link
G Acvrl1 activin A receptor like type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17911384) Ensembl
MGI		 PMID:17911384 GO_REF:0000107 NCBI chrNW_004936512:9,364,551...9,379,131
Ensembl chrNW_004936512:9,364,149...9,379,431 		JBrowse link
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:7731963), (PMID:9272950) MGI PMID:7731963 PMID:9272950 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Adam10 ADAM metallopeptidase domain 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:19,760,709...19,911,759
Ensembl chrNW_004936471:19,758,118...19,911,759 		JBrowse link
G Adamts3 ADAM metallopeptidase with thrombospondin type 1 motif 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936598:2,680,623...2,901,308
Ensembl chrNW_004936598:2,680,087...2,901,330 		JBrowse link
G Adcy9 adenylate cyclase 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936694:336,269...449,490
Ensembl chrNW_004936694:336,269...452,943 		JBrowse link
G Add1 adducin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18723693) Ensembl
MGI		 PMID:18723693 GO_REF:0000107 NCBI chrNW_004936477:20,695,109...20,766,053
Ensembl chrNW_004936477:20,691,951...20,766,152 		JBrowse link
G Als2 alsin Rho guanine nucleotide exchange factor ALS2 ISO RGD PMID:16049005 RGD:1599081 NCBI chrNW_004936726:940,696...1,015,771
Ensembl chrNW_004936726:939,341...1,015,799 		JBrowse link
G Amot angiomotin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12676095) Ensembl
MGI		 PMID:12676095 GO_REF:0000107 NCBI chrNW_004936499:2,594,190...2,661,307
Ensembl chrNW_004936499:2,594,239...2,661,359 		JBrowse link
G Angpt1 angiopoietin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11172728) Ensembl
MGI		 PMID:11172728 GO_REF:0000107 NCBI chrNW_004936470:37,105,469...37,328,183
Ensembl chrNW_004936470:37,105,466...37,328,190 		JBrowse link
G Ankrd11 ankyrin repeat domain containing 11 acts_upstream_of_or_within ISO (PMID:17986521) MGI PMID:17986521 NCBI chrNW_004936641:569,002...661,935
Ensembl chrNW_004936641:627,398...661,137 		JBrowse link
G Anks6 ankyrin repeat and sterile alpha motif domain containing 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936524:7,320,069...7,379,417
Ensembl chrNW_004936524:7,320,497...7,357,350 		JBrowse link
G Apba1 amyloid beta precursor protein binding family A member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17167098) Ensembl
MGI		 PMID:17167098 GO_REF:0000107 NCBI chrNW_004936503:5,699,580...5,770,920
Ensembl chrNW_004936503:5,699,558...5,771,030 		JBrowse link
G Apba2 amyloid beta precursor protein binding family A member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17167098) Ensembl
MGI		 PMID:17167098 GO_REF:0000107 NCBI chrNW_004936483:1,062,971...1,315,059
Ensembl chrNW_004936483:1,250,152...1,315,088 		JBrowse link
G Apba3 amyloid beta precursor protein binding family A member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17167098) Ensembl
MGI		 PMID:17167098 GO_REF:0000107 NCBI chrNW_004936588:2,124,286...2,130,085
Ensembl chrNW_004936588:2,124,396...2,130,085 		JBrowse link
G Apob apolipoprotein B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9502790)
(PMID:7878058)		 Ensembl
MGI		 PMID:7878058 PMID:9502790 GO_REF:0000107 NCBI chrNW_004936493:10,509,118...10,549,144
Ensembl chrNW_004936493:10,509,118...10,549,144 		JBrowse link
G Ar androgen receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10319319) Ensembl
MGI		 PMID:10319319 GO_REF:0000107 NCBI chrNW_004936635:485,903...647,820
Ensembl chrNW_004936635:485,903...647,932 		JBrowse link
G Armc5 armadillo repeat containing 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28169274) Ensembl
MGI		 PMID:28169274 GO_REF:0000107 NCBI chrNW_004936543:8,354,795...8,366,123
Ensembl chrNW_004936543:8,354,760...8,361,269 		JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:20,041,712...20,218,853
Ensembl chrNW_004936483:20,041,657...20,218,965 		JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8090202) Ensembl
MGI		 PMID:8090202 GO_REF:0000107 NCBI chrNW_004936794:567,462...569,195
Ensembl chrNW_004936794:568,567...569,139 		JBrowse link
G Atf2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:4,729,984...4,826,367
Ensembl chrNW_004936509:4,732,930...4,826,443 		JBrowse link
G Atp11a ATPase phospholipid transporting 11A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936472:665,967...750,396
Ensembl chrNW_004936472:669,155...730,035 		JBrowse link
G Atp7a ATPase copper transporting alpha ISO RGD PMID:10864443 RGD:1599395 NCBI chrNW_004936683:2,874,022...2,936,214
Ensembl chrNW_004936683:2,874,042...2,935,040 		JBrowse link
G Axin1 axin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19204372) Ensembl
MGI		 PMID:19204372 GO_REF:0000107 NCBI chrNW_004936501:599,963...633,837
Ensembl chrNW_004936501:599,919...633,873 		JBrowse link
G B9d1 B9 domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22179047) Ensembl
MGI		 PMID:22179047 GO_REF:0000107 NCBI chrNW_004936881:396,930...411,059
Ensembl chrNW_004936881:396,930...411,031 		JBrowse link
G Bap1 BRCA1 associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:3,239,009...3,247,806
Ensembl chrNW_004936473:3,239,010...3,247,806 		JBrowse link
G Bcl2l1 BCL2 like 1 acts_upstream_of_or_within ISO (PMID:10618441) MGI PMID:10618441 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Bcl2l11 BCL2 like 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16282979) Ensembl
MGI		 PMID:16282979 GO_REF:0000107 NCBI chrNW_004936783:15,493...50,959
Ensembl chrNW_004936783:18,194...50,983 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11290297) Ensembl
MGI		 PMID:11290297 GO_REF:0000107 NCBI chrNW_004936520:5,707,542...5,716,966
Ensembl chrNW_004936520:5,707,778...5,717,024 		JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16314491) Ensembl
MGI		 PMID:16314491 GO_REF:0000107 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17359964) Ensembl
MGI		 PMID:17359964 GO_REF:0000107 NCBI chrNW_004936804:52,435...115,289
Ensembl chrNW_004936804:48,947...115,412 		JBrowse link
G Brk1 BRICK1 subunit of SCAR/WAVE actin nucleating complex involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20861187) Ensembl
MGI		 PMID:20861187 GO_REF:0000107 NCBI chrNW_004936602:3,147,773...3,155,739
Ensembl chrNW_004936602:3,148,567...3,155,736 		JBrowse link
G Btf3 basic transcription factor 3 acts_upstream_of_or_within ISO (PMID:7655515) MGI PMID:7655515 NCBI chrNW_004936549:3,066,182...3,073,898
Ensembl chrNW_004936549:3,066,641...3,073,744 		JBrowse link
G Bysl bystin like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17055491) Ensembl
MGI		 PMID:17055491 GO_REF:0000107 NCBI chrNW_004936476:17,887,998...17,896,598
Ensembl chrNW_004936476:17,888,335...17,896,268 		JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19004860) Ensembl
MGI		 PMID:19004860 GO_REF:0000107 NCBI chrNW_004936498:3,099,419...3,242,334
Ensembl chrNW_004936498:3,099,396...3,242,335 		JBrowse link
G C5 complement C5 acts_upstream_of_or_within ISO (PMID:18947875) MGI PMID:18947875 NCBI chrNW_004936487:9,391,774...9,474,168
Ensembl chrNW_004936487:9,391,804...9,474,159 		JBrowse link
G C6 complement C6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18947875) Ensembl
MGI		 PMID:18947875 GO_REF:0000107 NCBI chrNW_004936518:1,471,116...1,532,733
Ensembl chrNW_004936518:1,471,355...1,532,439 		JBrowse link
G Camsap3 calmodulin regulated spectrin associated protein family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936588:4,660,664...4,669,836
Ensembl chrNW_004936588:4,655,311...4,669,532 		JBrowse link
G Ccm2 CCM2 scaffold protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19151727) Ensembl
MGI		 PMID:19151727 GO_REF:0000107 NCBI chrNW_004936478:19,820,092...19,882,358
Ensembl chrNW_004936478:19,819,675...19,882,343 		JBrowse link
G Ccnb1 cyclin B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9539739) Ensembl
MGI		 PMID:9539739 GO_REF:0000107 NCBI chrNW_004936480:400,287...407,677
Ensembl chrNW_004936480:399,224...407,704 		JBrowse link
G Ccnb2 cyclin B2 acts_upstream_of_or_within ISO (PMID:9539739) MGI PMID:9539739 NCBI chrNW_004936471:20,216,435...20,238,543 JBrowse link
G Ccnk cyclin K acts_upstream_of_or_within ISO (PMID:22012619) MGI PMID:22012619 NCBI chrNW_004936604:3,283,996...3,316,516
Ensembl chrNW_004936604:3,283,715...3,319,572 		JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO (PMID:15775979) MGI PMID:15775979 NCBI chrNW_004936475:18,990,529...19,065,954
Ensembl chrNW_004936475:18,990,474...19,067,203 		JBrowse link
G Cdk2ap1 cyclin dependent kinase 2 associated protein 1 acts_upstream_of_or_within ISO (PMID:19229340) MGI PMID:19229340 NCBI chrNW_004936558:1,458,885...1,468,698 JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26334721) Ensembl
MGI		 PMID:26334721 GO_REF:0000107 NCBI chrNW_004936476:22,717,308...22,725,127
Ensembl chrNW_004936476:22,717,260...22,725,182 		JBrowse link
G Cert1 ceramide transporter 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19139267)
(PMID:27996060)		 Ensembl
MGI		 PMID:19139267 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936549:1,261,913...1,368,743
Ensembl chrNW_004936549:1,261,931...1,371,380 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16207732) Ensembl
MGI		 PMID:16207732 GO_REF:0000107 NCBI chrNW_004936496:12,381,225...12,505,121
Ensembl chrNW_004936496:12,381,126...12,505,150 		JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15367660) Ensembl
MGI		 PMID:15367660 GO_REF:0000107 NCBI chrNW_004936880:546,250...608,061
Ensembl chrNW_004936880:546,236...608,080 		JBrowse link
G Chrd chordin involved_in ISO (PMID:12810603) MGI PMID:12810603 NCBI chrNW_004936578:5,498,473...5,507,195
Ensembl chrNW_004936578:5,498,887...5,507,198 		JBrowse link
G Chst11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936492:9,886,269...10,092,725
Ensembl chrNW_004936492:9,886,254...10,092,221 		JBrowse link
G Chtop chromatin target of PRMT1 acts_upstream_of_or_within ISO (PMID:27996060) MGI PMID:27996060 NCBI chrNW_004936580:3,436,260...3,444,522
Ensembl chrNW_004936580:3,434,773...3,445,080 		JBrowse link
G Cir1 corepressor interacting with RBPJ, CIR1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936509:4,131,257...4,171,984
Ensembl chrNW_004936509:4,130,629...4,172,408 		JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16579983) Ensembl
MGI		 PMID:16579983 GO_REF:0000107 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735 		JBrowse link
G Cmip c-Maf inducing protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936475:29,130,483...29,205,750
Ensembl chrNW_004936475:29,131,720...29,205,885 		JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:32879327) MGI PMID:32879327 NCBI chrNW_004936527:2,859,442...4,748,885
Ensembl chrNW_004936527:2,859,930...4,746,995 		JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936506:8,886,494...8,923,921
Ensembl chrNW_004936506:8,886,494...8,923,930 		JBrowse link
G Cops3 COP9 signalosome subunit 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12972600) Ensembl
MGI		 PMID:12972600 GO_REF:0000107 NCBI chrNW_004936741:905,593...931,148
Ensembl chrNW_004936741:905,252...931,408 		JBrowse link
G Coq7 coenzyme Q7, hydroxylase acts_upstream_of_or_within ISO (PMID:11585841)
(PMID:11716496)		 MGI PMID:11585841 PMID:11716496 NCBI chrNW_004936501:5,035,986...5,043,864
Ensembl chrNW_004936501:5,034,224...5,043,909 		JBrowse link
G Cpt2 carnitine palmitoyltransferase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936522:7,858,172...7,875,679
Ensembl chrNW_004936522:7,856,087...7,875,685 		JBrowse link
G Cripto cripto, EGF-CFC family member acts_upstream_of_or_within ISO (PMID:9876177) MGI PMID:9876177 NCBI chrNW_004936596:451,483...453,892 JBrowse link
G Ctcf CCCTC-binding factor acts_upstream_of_or_within ISO (PMID:28846746) MGI PMID:28846746 NCBI chrNW_004936475:17,987,137...18,031,733
Ensembl chrNW_004936475:17,987,156...18,031,760 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19204372)
(PMID:18231602)		 Ensembl
MGI		 PMID:18231602 PMID:19204372 GO_REF:0000107 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293 		JBrowse link
G Cubn cubilin ISO RGD PMID:15616221 RGD:1599657 NCBI chrNW_004936520:10,140,784...10,410,082
Ensembl chrNW_004936520:10,140,784...10,409,851 		JBrowse link
G Cul3 cullin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10500095) Ensembl
MGI		 PMID:10500095 GO_REF:0000107 NCBI chrNW_004936569:6,067,230...6,131,467
Ensembl chrNW_004936569:6,065,367...6,132,316 		JBrowse link
G Cul4a cullin 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:409,083...432,442
Ensembl chrNW_004936472:408,659...432,379 		JBrowse link
G CUNH19orf67 chromosome unknown C19orf67 homolog acts_upstream_of_or_within ISO (PMID:27996060) MGI PMID:27996060 NCBI chrNW_004936659:2,740,595...2,743,490
Ensembl chrNW_004936659:2,740,728...2,743,490 		JBrowse link
G CUNH1orf43 chromosome unknown C1orf43 homolog acts_upstream_of_or_within ISO (PMID:27996060) MGI PMID:27996060 NCBI chrNW_004936580:3,902,345...3,914,293
Ensembl chrNW_004936580:3,906,135...3,914,298 		JBrowse link
G Dab2 DAB adaptor protein 2 acts_upstream_of_or_within ISO (PMID:12413896) MGI PMID:12413896 NCBI chrNW_004936518:2,915,819...2,936,474
Ensembl chrNW_004936518:2,915,764...2,937,875 		JBrowse link
G Dbn1 drebrin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936597:1,735,589...1,751,628
Ensembl chrNW_004936597:1,735,380...1,747,569 		JBrowse link
G Dhx35 DEAH-box helicase 35 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936561:2,449,924...2,521,145
Ensembl chrNW_004936561:2,449,662...2,521,151 		JBrowse link
G Diaph3 diaphanous related formin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24239357) Ensembl
MGI		 PMID:24239357 GO_REF:0000107 NCBI chrNW_004936705:1,381,025...1,833,890
Ensembl chrNW_004936705:1,380,445...1,731,280 		JBrowse link
G Dnaaf2 dynein axonemal assembly factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31107948) Ensembl
MGI		 PMID:31107948 GO_REF:0000107 NCBI chrNW_004936583:386,806...394,650
Ensembl chrNW_004936583:387,189...394,910 		JBrowse link
G Dsc3 desmocollin 3 acts_upstream_of_or_within ISO (PMID:16418220) MGI PMID:16418220 NCBI chrNW_004936682:2,126,394...2,161,672
Ensembl chrNW_004936682:2,057,190...2,164,429 		JBrowse link
G Dusp3 dual specificity phosphatase 3 ISO RGD PMID:18035061 RGD:2317890 NCBI chrNW_004936541:325,443...338,426 JBrowse link
G Edn1 endothelin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15327783) Ensembl
MGI		 PMID:15327783 GO_REF:0000107 NCBI chrNW_004936534:885,489...892,292
Ensembl chrNW_004936534:885,287...891,772 		JBrowse link
G Ednra endothelin receptor type A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15327783) Ensembl
MGI		 PMID:15327783 GO_REF:0000107 NCBI chrNW_004936535:1,950,117...2,005,786
Ensembl chrNW_004936535:1,949,941...2,005,910 		JBrowse link
G Eif2s2 eukaryotic translation initiation factor 2 subunit beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19168544) Ensembl
MGI		 PMID:19168544 GO_REF:0000107 NCBI chrNW_004936561:6,529,204...6,548,126
Ensembl chrNW_004936561:6,529,162...6,549,714 		JBrowse link
G Eif4e2 eukaryotic translation initiation factor 4E family member 2 acts_upstream_of_or_within ISO (PMID:22751931) MGI PMID:22751931 NCBI chrNW_004936525:4,519,709...4,549,364
Ensembl chrNW_004936525:4,519,724...4,549,364 		JBrowse link
G Ell elongation factor for RNA polymerase II involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11118326) Ensembl
MGI		 PMID:11118326 GO_REF:0000107 NCBI chrNW_004936596:2,745,862...2,812,513
Ensembl chrNW_004936596:2,745,825...2,812,880 		JBrowse link
G Emx1 empty spiracles homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23861879) Ensembl
MGI		 PMID:23861879 GO_REF:0000107 NCBI chrNW_004936491:16,745,310...16,762,422
Ensembl chrNW_004936491:16,745,310...16,762,422 		JBrowse link
G Endog endonuclease G involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14663139) Ensembl
MGI		 PMID:14663139 GO_REF:0000107 NCBI chrNW_004936487:16,282,115...16,285,486
Ensembl chrNW_004936487:16,282,398...16,285,418 		JBrowse link
G Eno1 enolase 1 acts_upstream_of_or_within ISO (PMID:9626503) MGI PMID:9626503 NCBI chrNW_004936623:3,115,357...3,130,289
Ensembl chrNW_004936623:3,115,081...3,128,183 		JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18794329) Ensembl
MGI		 PMID:18794329 GO_REF:0000107 NCBI chrNW_004936469:50,329,564...50,443,532
Ensembl chrNW_004936469:50,329,409...50,443,626 		JBrowse link
G Epn1 epsin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19666558) Ensembl
MGI		 PMID:19666558 GO_REF:0000107 NCBI chrNW_004936981:194,176...213,021
Ensembl chrNW_004936981:194,157...213,066 		JBrowse link
G Epn2 epsin 2 acts_upstream_of_or_within ISO (PMID:19666558) MGI PMID:19666558 NCBI chrNW_004936881:417,348...504,650
Ensembl chrNW_004936881:419,682...504,650 		JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17020410) Ensembl
MGI		 PMID:17020410 GO_REF:0000107 NCBI chrNW_004936706:1,816,561...1,829,638
Ensembl chrNW_004936706:1,816,571...1,829,692 		JBrowse link
G Erf ETS2 repressor factor acts_upstream_of_or_within ISO (PMID:17502352) MGI PMID:17502352 NCBI chrNW_004936706:255,479...263,154
Ensembl chrNW_004936706:255,407...263,179 		JBrowse link
G Esrrb estrogen related receptor beta acts_upstream_of_or_within ISO (PMID:9285590) MGI PMID:9285590 NCBI chrNW_004936488:5,350,133...5,452,366
Ensembl chrNW_004936488:5,292,466...5,454,689 		JBrowse link
G Etnk2 ethanolamine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16861741) Ensembl
MGI		 PMID:16861741 GO_REF:0000107 NCBI chrNW_004936567:610,509...627,960
Ensembl chrNW_004936567:610,663...627,970 		JBrowse link
G Etv2 ETS variant transcription factor 2 acts_upstream_of_or_within ISO (PMID:18462699) MGI PMID:18462699 NCBI chrNW_004936570:671,152...673,768 JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17687036) Ensembl
MGI		 PMID:17687036 GO_REF:0000107 NCBI chrNW_004936710:1,760,365...1,815,269
Ensembl chrNW_004936710:1,760,089...1,815,508 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (PMID:9435295)
(PMID:17687036)		 MGI PMID:9435295 PMID:17687036 NCBI chrNW_004936486:10,506,680...10,606,272
Ensembl chrNW_004936486:10,507,097...10,602,019 		JBrowse link
G Fkbp10 FKBP prolyl isomerase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24777781) Ensembl
MGI		 PMID:24777781 GO_REF:0000107 NCBI chrNW_004936490:16,712,843...16,720,438
Ensembl chrNW_004936490:16,712,761...16,720,499 		JBrowse link
G Fkrp fukutin related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28039900)
(PMID:23591631)		 Ensembl
MGI		 PMID:23591631 PMID:28039900 GO_REF:0000107 NCBI chrNW_004936664:577,109...586,848
Ensembl chrNW_004936664:578,126...586,795 		JBrowse link
G Flcn folliculin involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:21258407) UniProt
MGI
Ensembl		 PMID:21258407 GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936741:881,150...901,296
Ensembl chrNW_004936741:880,736...901,468 		JBrowse link
G Flvcr1 FLVCR choline and heme transporter 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18258918) Ensembl
MGI		 PMID:18258918 GO_REF:0000107 NCBI chrNW_004936557:693,445...727,166
Ensembl chrNW_004936557:692,489...726,965 		JBrowse link
G Flvcr2 FLVCR choline and putative heme transporter 2 acts_upstream_of_or_within ISO (PMID:32369453) MGI PMID:32369453 NCBI chrNW_004936488:4,653,891...4,713,982
Ensembl chrNW_004936488:4,653,692...4,712,313 		JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11044407) Ensembl
MGI		 PMID:11044407 GO_REF:0000107 NCBI chrNW_004936599:3,642,504...3,649,294
Ensembl chrNW_004936599:3,642,504...3,648,417 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:9152011) MGI PMID:9152011 NCBI chrNW_004936620:2,966,341...2,969,349
Ensembl chrNW_004936620:2,966,341...2,969,349 		JBrowse link
G Foxd3 forkhead box D3 involved_in ISO (MGI:2388404|PMID:12381664) UniProt PMID:12381664 MGI:2388404 NCBI chrNW_004936692:951,394...953,612
Ensembl chrNW_004936692:951,562...953,001 		JBrowse link
G Foxf1 forkhead box F1 involved_in
acts_upstream_of_or_within		 ISO (PMID:19500772)
(PMID:11124112), (PMID:11493558)		 DFLAT
MGI		 PMID:11124112 PMID:11493558 PMID:19500772 NCBI chrNW_004943883:4...1,756 JBrowse link
G Gabpa GA binding protein transcription factor subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17485447) Ensembl
MGI		 PMID:17485447 GO_REF:0000107 NCBI chrNW_004936640:1,882,297...1,917,210
Ensembl chrNW_004936640:1,882,238...1,914,232 		JBrowse link
G Gata1 GATA binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9576834) Ensembl
MGI		 PMID:9576834 GO_REF:0000107 NCBI chrNW_004936721:742,862...750,843
Ensembl chrNW_004936721:742,862...750,768 		JBrowse link
G Gata3 GATA binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20702712) Ensembl
MGI		 PMID:20702712 GO_REF:0000107 NCBI chrNW_004936484:6,780,692...6,800,883
Ensembl chrNW_004936484:6,780,692...6,800,966 		JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO (PMID:15310850)
(PMID:9136933)
(PMID:20123909)
(PMID:9136932)		 MGI PMID:9136932 PMID:9136933 PMID:15310850 PMID:20123909 NCBI chrNW_004936675:3,408,549...3,420,828 JBrowse link
G Gata6 GATA binding protein 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9832509)
(PMID:20123909)		 Ensembl
MGI		 PMID:9832509 PMID:20123909 GO_REF:0000107 NCBI chrNW_004936550:1,814,336...1,844,399
Ensembl chrNW_004936550:1,814,336...1,844,399 		JBrowse link
G Gatad2a GATA zinc finger domain containing 2A acts_upstream_of_or_within ISO (PMID:17565372) MGI PMID:17565372 NCBI chrNW_004936596:1,958,961...2,074,471
Ensembl chrNW_004936596:1,958,844...2,074,707 		JBrowse link
G Gdf1 growth differentiation factor 1 acts_upstream_of_or_within ISO (PMID:17936261) MGI PMID:17936261 NCBI chrNW_004936596:2,467,428...2,469,213
Ensembl chrNW_004936596:2,467,431...2,471,476 		JBrowse link
G Gdf3 growth differentiation factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17936261)
(PMID:16368929)		 Ensembl
MGI		 PMID:16368929 PMID:17936261 GO_REF:0000107 NCBI chrNW_004937847:8,179...16,783
Ensembl chrNW_004937847:7,456...16,783 		JBrowse link
G Gja1 gap junction protein alpha 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9486664) Ensembl
MGI		 PMID:9486664 GO_REF:0000107 NCBI chrNW_004936658:3,920,043...3,932,987
Ensembl chrNW_004936658:3,920,043...3,932,987 		JBrowse link
G Gjb3 gap junction protein beta 3 ISO RGD PMID:9291584 RGD:1599752 NCBI chrNW_004936474:17,427,255...17,431,368
Ensembl chrNW_004936474:17,429,926...17,430,729 		JBrowse link
G Gli2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19056373) Ensembl
MGI		 PMID:19056373 GO_REF:0000107 NCBI chrNW_004936469:49,616,552...49,788,760
Ensembl chrNW_004936469:49,617,095...49,673,213 		JBrowse link
G Gli3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16254602) Ensembl
MGI		 PMID:16254602 GO_REF:0000107 NCBI chrNW_004936478:17,129,922...17,403,630
Ensembl chrNW_004936478:17,126,911...17,403,011 		JBrowse link
G Gna12 G protein subunit alpha 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12077299) Ensembl
MGI		 PMID:12077299 GO_REF:0000107 NCBI chrNW_004936823:447,979...543,134
Ensembl chrNW_004936823:447,917...543,140 		JBrowse link
G Gna13 G protein subunit alpha 13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12077299) Ensembl
MGI		 PMID:12077299 GO_REF:0000107 NCBI chrNW_004936541:7,583,911...7,623,485
Ensembl chrNW_004936541:7,583,216...7,623,375 		JBrowse link
G Gpi glucose-6-phosphate isomerase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:1582174) Ensembl
MGI		 PMID:1582174 GO_REF:0000107 NCBI chrNW_004936570:1,582,120...1,608,537
Ensembl chrNW_004936570:1,579,372...1,608,788 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21262862) Ensembl
MGI		 PMID:21262862 GO_REF:0000107 NCBI chrNW_004936470:41,856,683...41,961,666
Ensembl chrNW_004936470:41,859,035...42,002,844 		JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B acts_upstream_of_or_within ISO (PMID:9147327) MGI PMID:9147327 NCBI chrNW_004936587:3,406,055...3,806,956
Ensembl chrNW_004936587:3,405,698...3,804,664 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9500551) Ensembl
MGI		 PMID:9500551 GO_REF:0000107 NCBI chrNW_004936515:8,289,764...8,292,937
Ensembl chrNW_004936515:8,289,315...8,293,175 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9171826) Ensembl
MGI		 PMID:9171826 GO_REF:0000107 NCBI chrNW_004936516:4,692,926...4,695,625
Ensembl chrNW_004936516:4,692,926...4,695,632 		JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 acts_upstream_of_or_within ISO (PMID:14657344) MGI PMID:14657344 NCBI chrNW_004936471:32,527,551...32,570,548
Ensembl chrNW_004936471:32,529,847...32,570,284 		JBrowse link
G Hdac3 histone deacetylase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:12,530,546...12,546,556
Ensembl chrNW_004936504:12,530,528...12,546,556 		JBrowse link
G Heg1 heart development protein with EGF like domains 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19151727) Ensembl
MGI		 PMID:19151727 GO_REF:0000107 NCBI chrNW_004936725:261,809...336,390
Ensembl chrNW_004936725:261,712...336,414 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11500373) Ensembl
MGI		 PMID:11500373 GO_REF:0000107 NCBI chrNW_004936711:640,002...642,580
Ensembl chrNW_004936711:639,905...642,622 		JBrowse link
G Hes3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO (PMID:11500373) MGI PMID:11500373 NCBI chrNW_004936623:1,096,519...1,098,175
Ensembl chrNW_004936623:1,096,870...1,097,858 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO (PMID:21445260) MGI PMID:21445260 NCBI chrNW_004936601:2,137,490...2,143,797
Ensembl chrNW_004936601:2,136,873...2,143,857 		JBrowse link
G Hinfp histone H4 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,072,771...4,083,973
Ensembl chrNW_004936542:4,072,624...4,084,064 		JBrowse link
G Hm13 histocompatibility minor 13 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936485:18,539,873...18,583,605
Ensembl chrNW_004936485:18,539,826...18,583,813 		JBrowse link
G Hsd17b2 hydroxysteroid 17-beta dehydrogenase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18048640) Ensembl
MGI		 PMID:18048640 GO_REF:0000107 NCBI chrNW_004936475:29,426,922...29,494,215
Ensembl chrNW_004936475:29,426,883...29,494,225 		JBrowse link
G Hsf1 heat shock transcription factor 1 acts_upstream_of_or_within ISO (PMID:10545106) MGI PMID:10545106 NCBI chrNW_004936470:7,927,734...7,950,805
Ensembl chrNW_004936470:7,928,095...7,933,337 		JBrowse link
G Ifitm5 interferon induced transmembrane protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:160,734...161,960
Ensembl chrNW_004936888:160,531...161,899 		JBrowse link
G Igf2 insulin like growth factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936816:972,902...981,232
Ensembl chrNW_004936816:972,282...979,167 		JBrowse link
G Ihh Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17881493) Ensembl
MGI		 PMID:17881493 GO_REF:0000107 NCBI chrNW_004936569:1,474,693...1,480,562
Ensembl chrNW_004936569:1,474,665...1,480,568 		JBrowse link
G Inpp5b inositol polyphosphate-5-phosphatase B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20195868) Ensembl
MGI		 PMID:20195868 GO_REF:0000107 NCBI chrNW_004936474:20,028,575...20,083,931
Ensembl chrNW_004936474:20,028,585...20,083,906 		JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18573875) Ensembl
MGI		 PMID:18573875 GO_REF:0000107 NCBI chrNW_004936538:7,641,485...7,662,033
Ensembl chrNW_004936538:7,641,127...7,661,787 		JBrowse link
G Itgb1 integrin subunit beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7544313) Ensembl
MGI		 PMID:7544313 GO_REF:0000107 NCBI chrNW_004936574:1,465,981...1,495,717
Ensembl chrNW_004936574:1,465,897...1,495,762 		JBrowse link
G Jag2 jagged canonical Notch ligand 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9531541) Ensembl
MGI		 PMID:9531541 GO_REF:0000107 NCBI chrNW_004936621:363,489...380,616
Ensembl chrNW_004936621:366,616...380,618 		JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10022836) Ensembl
MGI		 PMID:10022836 GO_REF:0000107 NCBI chrNW_004936659:1,890,786...1,892,619
Ensembl chrNW_004936659:1,891,080...1,892,123 		JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17325035) Ensembl
MGI		 PMID:17325035 GO_REF:0000107 NCBI chrNW_004936490:16,952,698...16,960,424
Ensembl chrNW_004936490:16,952,363...16,960,489 		JBrowse link
G Kdm2a lysine demethylase 2A acts_upstream_of_or_within ISO (PMID:25463925) MGI PMID:25463925 NCBI chrNW_004936599:2,466,427...2,576,623
Ensembl chrNW_004936599:2,466,214...2,576,623 		JBrowse link
G Kdm6a lysine demethylase 6A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23028370)
(PMID:22949634)		 Ensembl
MGI		 PMID:22949634 PMID:23028370 GO_REF:0000107 NCBI chrNW_004936502:10,980,303...11,196,711
Ensembl chrNW_004936502:10,980,118...11,196,163 		JBrowse link
G Kdm8 lysine demethylase 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26334721) Ensembl
MGI		 PMID:26334721 GO_REF:0000107 NCBI chrNW_004936501:10,932,541...10,955,772
Ensembl chrNW_004936501:10,933,671...10,951,707 		JBrowse link
G Keap1 kelch like ECH associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15087497) Ensembl
MGI		 PMID:15087497 GO_REF:0000107 NCBI chrNW_004936659:785,059...793,775
Ensembl chrNW_004936659:782,340...793,688 		JBrowse link
G Kidins220 kinase D interacting substrate 220 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19449316) Ensembl
MGI		 PMID:19449316 GO_REF:0000107 NCBI chrNW_004936532:5,270,338...5,368,160
Ensembl chrNW_004936532:5,272,149...5,362,814 		JBrowse link
G Kif3a kinesin family member 3A acts_upstream_of_or_within ISO (PMID:19286674) MGI PMID:19286674 NCBI chrNW_004936647:2,461,017...2,502,550
Ensembl chrNW_004936647:2,461,138...2,501,871 		JBrowse link
G Kifbp kinesin family binding protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936521:9,395,490...9,421,093
Ensembl chrNW_004936521:9,395,465...9,421,629 		JBrowse link
G Klf1 KLF transcription factor 1 acts_upstream_of_or_within ISO (PMID:7753194) MGI PMID:7753194 NCBI chrNW_004936659:1,946,614...1,950,003
Ensembl chrNW_004936659:1,947,075...1,950,003 		JBrowse link
G Kmt2d lysine methyltransferase 2D acts_upstream_of_or_within ISO (PMID:16540515) MGI PMID:16540515 NCBI chrNW_004936512:6,819,240...6,860,852
Ensembl chrNW_004936512:6,822,057...6,854,451 		JBrowse link
G Lig4 DNA ligase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10911993), (PMID:9823897)
(PMID:16777961)		 Ensembl
MGI		 PMID:9823897 PMID:10911993 PMID:16777961 GO_REF:0000107 NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933 		JBrowse link
G LOC101960773 cyclic AMP-dependent transcription factor ATF-7 involved_in ISO (PMID:17699753) MGI PMID:17699753 NCBI chrNW_004936512:10,780,826...10,884,806
Ensembl chrNW_004936512:10,785,763...10,884,795 		JBrowse link
G LOC101962609 protein SCO2 homolog, mitochondrial involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19837698) Ensembl
MGI		 PMID:19837698 GO_REF:0000107 NCBI chrNW_004936629:318,581...320,804
Ensembl chrNW_004936629:318,581...320,795 		JBrowse link
G LOC101965998 notch receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17359302) Ensembl
MGI		 PMID:17359302 GO_REF:0000107 NCBI chrNW_004936872:454,273...539,544
Ensembl chrNW_004936872:390,852...536,321 		JBrowse link
G LOC101970976 exocyst complex component 3-like protein 2 acts_upstream_of_or_within ISO (PMID:27996060) MGI PMID:27996060 NCBI chrNW_004936706:1,739,267...1,752,418 JBrowse link
G LOC101974563 protein NPAT involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936551:534,879...585,674
Ensembl chrNW_004936551:534,846...587,604 		JBrowse link
G LOC101976436 uncharacterized LOC101976436 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937158:23,784...46,354 JBrowse link
G LOC106144891 CUGBP Elav-like family member 4 acts_upstream_of_or_within ISO (PMID:27996060) MGI PMID:27996060 NCBI chrNW_004936517:8,010,133...8,010,721 JBrowse link
G Lrp1b LDL receptor related protein 1B acts_upstream_of_or_within ISO (PMID:20383322) MGI PMID:20383322 NCBI chrNW_004936469:35,000,773...36,160,216
Ensembl chrNW_004936469:35,203,594...36,159,283 		JBrowse link
G Ly6e lymphocyte antigen 6 family member E acts_upstream_of_or_within ISO (PMID:11784869) MGI PMID:11784869 NCBI chrNW_004936470:8,879,217...8,880,777 JBrowse link
G Maff MAF bZIP transcription factor F involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15087497) Ensembl
MGI		 PMID:15087497 GO_REF:0000107 NCBI chrNW_004936492:2,983,322...2,988,900
Ensembl chrNW_004936492:2,986,813...2,987,836 		JBrowse link
G Mafg MAF bZIP transcription factor G involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15087497) Ensembl
MGI		 PMID:15087497 GO_REF:0000107 NCBI chrNW_004936594:5,425,117...5,430,057
Ensembl chrNW_004936594:5,424,940...5,430,097 		JBrowse link
G Man2a1 mannosidase alpha class 2A member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16754854) Ensembl
MGI		 PMID:16754854 GO_REF:0000107 NCBI chrNW_004936531:4,331,354...4,494,110
Ensembl chrNW_004936531:4,331,200...4,494,131 		JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18324732) Ensembl
MGI		 PMID:18324732 GO_REF:0000107 NCBI chrNW_004936694:2,223,020...2,263,388
Ensembl chrNW_004936694:2,222,996...2,263,390 		JBrowse link
G Mbd3 methyl-CpG binding domain protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17287250) Ensembl
MGI		 PMID:17287250 GO_REF:0000107 NCBI chrNW_004936588:865,046...873,821
Ensembl chrNW_004936588:864,867...874,923 		JBrowse link
G Mbnl1 muscleblind like splicing regulator 1 involved_in ISO (MGI:2675975|PMID:12915312) UniProt PMID:12915312 MGI:2675975 NCBI chrNW_004936519:419,332...580,706
Ensembl chrNW_004936519:419,571...580,730 		JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO (PMID:17029558) MGI PMID:17029558 NCBI chrNW_004936593:2,742,236...3,282,596
Ensembl chrNW_004936593:3,106,202...3,282,596 		JBrowse link
G Med1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14500757) Ensembl
MGI		 PMID:14500757 GO_REF:0000107 NCBI chrNW_004936490:14,625,201...14,663,184
Ensembl chrNW_004936490:14,625,897...14,657,802 		JBrowse link
G Mgat1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8290590) Ensembl
MGI		 PMID:8290590 GO_REF:0000107 NCBI chrNW_004936826:344,452...364,929
Ensembl chrNW_004936826:344,456...364,418 		JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16000382) Ensembl
MGI		 PMID:16000382 GO_REF:0000107 NCBI chrNW_004936550:1,439,652...1,577,804
Ensembl chrNW_004936550:1,439,646...1,573,637 		JBrowse link
G Mosmo modulator of smoothened acts_upstream_of_or_within ISO (PMID:34486668) MGI PMID:34486668 NCBI chrNW_004936501:6,981,331...7,047,046 JBrowse link
G Mrtfb myocardin related transcription factor B acts_upstream_of_or_within ISO (PMID:17183527) MGI PMID:17183527 NCBI chrNW_004936501:2,414,696...2,571,627
Ensembl chrNW_004936501:2,468,345...2,567,234 		JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within
NOT|acts_upstream_of_or_within		 IEA
ISO		 (PMID:9288110)
(PMID:9425892)		 Ensembl
MGI		 PMID:9288110 PMID:9425892 GO_REF:0000107 NCBI chrNW_004936508:4,943,987...5,013,356
Ensembl chrNW_004936508:4,944,007...5,013,356 		JBrowse link
G Msx1 msh homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17601530) Ensembl
MGI		 PMID:17601530 GO_REF:0000107 NCBI chrNW_004936477:17,406,551...17,413,615
Ensembl chrNW_004936477:17,409,191...17,412,919 		JBrowse link
G Mtss1 MTSS I-BAR domain containing 1 acts_upstream_of_or_within ISO (PMID:21406566) MGI PMID:21406566 NCBI chrNW_004936470:22,963,498...23,117,923
Ensembl chrNW_004936470:22,963,496...23,117,226 		JBrowse link
G Muc1 mucin 1, cell surface associated ISO RGD PMID:21263748 RGD:7349384 NCBI chrNW_004936580:4,691,870...4,694,092 JBrowse link
G Myb MYB proto-oncogene, transcription factor acts_upstream_of_or_within ISO (PMID:17927961)
(PMID:10523863)		 MGI PMID:10523863 PMID:17927961 NCBI chrNW_004936560:2,797,943...2,828,813
Ensembl chrNW_004936560:2,796,697...2,829,650 		JBrowse link
G Mybphl myosin binding protein H like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936704:815,325...831,149
Ensembl chrNW_004936704:815,271...830,084 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:23077551 RGD:7207883 NCBI chrNW_004936470:20,480,844...20,485,955
Ensembl chrNW_004936470:20,480,829...20,485,965 		JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:11283949), (PMID:9356462)
(PMID:12893741)		 MGI PMID:9356462 PMID:11283949 PMID:12893741 NCBI chrNW_004936595:1,697,283...1,832,571
Ensembl chrNW_004936595:1,694,102...1,832,364 		JBrowse link
G Myh9 myosin heavy chain 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16630581)
(PMID:15555549)		 Ensembl
MGI		 PMID:15555549 PMID:16630581 GO_REF:0000107 NCBI chrNW_004936492:4,384,215...4,466,229
Ensembl chrNW_004936492:4,384,215...4,466,262 		JBrowse link
G Myo18b myosin XVIIIB acts_upstream_of_or_within ISO (PMID:18761673) MGI PMID:18761673 NCBI chrNW_004936657:551,535...764,247 JBrowse link
G Myo1e myosin IE involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17143286) Ensembl
MGI		 PMID:17143286 GO_REF:0000107 NCBI chrNW_004936471:20,244,424...20,435,604
Ensembl chrNW_004936471:20,244,397...20,435,648 		JBrowse link
G N4bp2l2 NEDD4 binding protein 2 like 2 acts_upstream_of_or_within ISO (PMID:18360097) MGI PMID:18360097 NCBI chrNW_004936472:27,045,052...27,134,170 JBrowse link
G Nbn nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936544:3,773,828...3,812,673
Ensembl chrNW_004936544:3,775,220...3,808,837 		JBrowse link
G Nckap1 NCK associated protein 1 acts_upstream_of_or_within ISO (PMID:16831833) MGI PMID:16831833 NCBI chrNW_004936509:11,525,764...11,624,833
Ensembl chrNW_004936509:11,524,556...11,624,621 		JBrowse link
G Ncor1 nuclear receptor corepressor 1 involved_in ISO (PMID:32467224) MGI PMID:32467224 NCBI chrNW_004936821:382,756...538,254
Ensembl chrNW_004936821:382,383...536,223 		JBrowse link
G Ncor2 nuclear receptor corepressor 2 acts_upstream_of_or_within
involved_in		 ISO (PMID:17928865)
(PMID:32467224)		 MGI PMID:17928865 PMID:32467224 NCBI chrNW_004936558:658,723...775,263
Ensembl chrNW_004936558:677,610...775,288 		JBrowse link
G Nlrp5 NLR family pyrin domain containing 5 acts_upstream_of_or_within ISO (PMID:11062459), (PMID:18804437) MGI PMID:11062459 PMID:18804437 NCBI chrNW_004936562:1,069,745...1,092,383 JBrowse link
G Nmt1 N-myristoyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15753093) Ensembl
MGI		 PMID:15753093 GO_REF:0000107 NCBI chrNW_004936541:1,391,133...1,424,148
Ensembl chrNW_004936541:1,391,087...1,421,248 		JBrowse link
G Nodal nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15485907)
(PMID:11311163)		 Ensembl
MGI		 PMID:11311163 PMID:15485907 GO_REF:0000107 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705 		JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17359964) Ensembl
MGI		 PMID:17359964 GO_REF:0000107 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483 		JBrowse link
G Nos3 nitric oxide synthase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11732991) Ensembl
MGI		 PMID:11732991 GO_REF:0000107 NCBI chrNW_004936527:6,427,147...6,445,770
Ensembl chrNW_004936527:6,427,093...6,446,534 		JBrowse link
G Notch1 notch receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7789282) Ensembl
MGI		 PMID:7789282 GO_REF:0000107 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428 		JBrowse link
G Nr2f2 nuclear receptor subfamily 2 group F member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17404209) Ensembl
MGI		 PMID:17404209 GO_REF:0000107 NCBI chrNW_004936483:6,886,447...6,900,986
Ensembl chrNW_004936483:6,886,153...6,900,997 		JBrowse link
G Nrbp1 nuclear receptor binding protein 1 involved_in ISO (MGI:5426079|PMID:22510880) UniProt PMID:22510880 MGI:5426079 NCBI chrNW_004936493:5,146,968...5,157,766
Ensembl chrNW_004936493:5,146,449...5,157,997 		JBrowse link
G Nsrp1 nuclear speckle splicing regulatory protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21296756) Ensembl
MGI		 PMID:21296756 GO_REF:0000107 NCBI chrNW_004936538:6,138,993...6,184,730
Ensembl chrNW_004936538:6,138,962...6,184,837 		JBrowse link
G Nsun2 NOP2/Sun RNA methyltransferase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936634:798,894...825,413
Ensembl chrNW_004936634:799,176...826,852 		JBrowse link
G Nxn nucleoredoxin acts_upstream_of_or_within ISO (PMID:27996060) MGI PMID:27996060 NCBI chrNW_004936538:6,966,296...6,995,691 JBrowse link
G Ocrl OCRL inositol polyphosphate-5-phosphatase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20195868) Ensembl
MGI		 PMID:20195868 GO_REF:0000107 NCBI chrNW_004936479:1,955,362...2,011,608
Ensembl chrNW_004936479:1,953,488...2,012,018 		JBrowse link
G Ooep oocyte expressed protein acts_upstream_of_or_within ISO (PMID:18804437) MGI PMID:18804437 NCBI chrNW_004937318:2,623...3,622 JBrowse link
G Otud7b OTU deubiquitinase 7B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936580:278,263...300,278
Ensembl chrNW_004936580:278,257...338,526 		JBrowse link
G P2ry2 purinergic receptor P2Y2 ISO RGD PMID:14517997 RGD:2316694 NCBI chrNW_004936498:2,432,436...2,444,495
Ensembl chrNW_004936498:2,432,448...2,444,354 		JBrowse link
G Palb2 partner and localizer of BRCA2 acts_upstream_of_or_within ISO (PMID:23657012) MGI PMID:23657012 NCBI chrNW_004936501:8,246,927...8,273,258 JBrowse link
G Pcgf2 polycomb group ring finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11290297) Ensembl
MGI		 PMID:11290297 GO_REF:0000107 NCBI chrNW_004936490:14,139,125...14,150,377
Ensembl chrNW_004936490:14,138,980...14,150,756 		JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO (PMID:20096683) MGI PMID:20096683 NCBI chrNW_004936778:149,844...248,905
Ensembl chrNW_004936778:149,177...247,357 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10331973), (PMID:17143286) Ensembl
MGI		 PMID:10331973 PMID:17143286 GO_REF:0000107 NCBI chrNW_004936482:16,804,129...16,853,539
Ensembl chrNW_004936482:16,807,569...16,853,587 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta acts_upstream_of_or_within ISO (PMID:17143286) MGI PMID:17143286 NCBI chrNW_004936504:4,762,251...4,799,789
Ensembl chrNW_004936504:4,762,184...4,799,829 		JBrowse link
G Pdzk1 PDZ domain containing 1 acts_upstream_of_or_within ISO (PMID:27996060) MGI PMID:27996060 NCBI chrNW_004936867:426,648...439,512 JBrowse link
G Pitpnb phosphatidylinositol transfer protein beta acts_upstream_of_or_within ISO (PMID:11907258) MGI PMID:11907258 NCBI chrNW_004936657:2,095,140...2,158,184
Ensembl chrNW_004936657:2,096,951...2,158,111 		JBrowse link
G Pitx2 paired like homeodomain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11493526) Ensembl
MGI		 PMID:11493526 GO_REF:0000107 NCBI chrNW_004936563:1,713,294...1,732,431 JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16282979) Ensembl
MGI		 PMID:16282979 GO_REF:0000107 NCBI chrNW_004936694:1,923,383...1,958,160
Ensembl chrNW_004936694:1,930,621...1,957,179 		JBrowse link
G Plcg1 phospholipase C gamma 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11744703) Ensembl
MGI		 PMID:11744703 GO_REF:0000107 NCBI chrNW_004936561:598,372...631,575
Ensembl chrNW_004936561:598,382...631,581 		JBrowse link
G Plod3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16467571) Ensembl
MGI		 PMID:16467571 GO_REF:0000107 NCBI chrNW_004936543:1,090,268...1,097,170
Ensembl chrNW_004936543:1,090,253...1,097,301 		JBrowse link
G Polb DNA polymerase beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936785:324,655...350,496
Ensembl chrNW_004936785:323,941...350,539 		JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23197651) Ensembl
MGI		 PMID:23197651 GO_REF:0000107 NCBI chrNW_004936541:4,988,469...5,004,110
Ensembl chrNW_004936541:4,988,368...5,003,922 		JBrowse link
G Prdm1 PR/SET domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15750184) Ensembl
MGI		 PMID:15750184 GO_REF:0000107 NCBI chrNW_004936564:2,594,362...2,690,680
Ensembl chrNW_004936564:2,667,660...2,690,683 		JBrowse link
G Prkcsh PRKCSH beta subunit of glucosidase II involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21685914) Ensembl
MGI		 PMID:21685914 GO_REF:0000107 NCBI chrNW_004936659:1,501,425...1,511,634
Ensembl chrNW_004936659:1,501,419...1,511,625 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10848611) Ensembl
MGI		 PMID:10848611 GO_REF:0000107 NCBI chrNW_004936664:3,492,032...3,502,738
Ensembl chrNW_004936664:3,491,920...3,504,667 		JBrowse link
G Prrc2b proline rich coiled-coil 2B acts_upstream_of_or_within ISO (PMID:27996060) MGI PMID:27996060 NCBI chrNW_004936487:18,196,673...18,247,725
Ensembl chrNW_004936487:18,196,751...18,245,266 		JBrowse link
G Psph phosphoserine phosphatase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936543:7,900,319...7,922,529
Ensembl chrNW_004936543:7,900,283...7,922,541 		JBrowse link
G Ptch1 patched 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21406566) Ensembl
MGI		 PMID:21406566 GO_REF:0000107 NCBI chrNW_004936626:4,241,993...4,301,919
Ensembl chrNW_004936626:4,241,908...4,309,476 		JBrowse link
G Pth1r parathyroid hormone 1 receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936596:674,088...693,191
Ensembl chrNW_004936596:674,088...693,213 		JBrowse link
G Ptprr protein tyrosine phosphatase receptor type R involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:8,268,227...8,377,427
Ensembl chrNW_004936545:8,268,218...8,377,169 		JBrowse link
G Rad51b RAD51 paralog B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10567591) Ensembl
MGI		 PMID:10567591 GO_REF:0000107 NCBI chrNW_004936495:11,185,560...11,762,254
Ensembl chrNW_004936495:11,195,767...11,467,458 		JBrowse link
G Rbbp6 RB binding protein 6, ubiquitin ligase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17470788) Ensembl
MGI		 PMID:17470788 GO_REF:0000107 NCBI chrNW_004936501:8,966,074...8,997,027
Ensembl chrNW_004936501:8,966,068...8,998,000 		JBrowse link
G Rcn1 reticulocalbin 1 acts_upstream_of_or_within ISO (PMID:19474196) MGI PMID:19474196 NCBI chrNW_004936533:5,685,053...5,693,518 JBrowse link
G Rdh10 retinol dehydrogenase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17473173) Ensembl
MGI		 PMID:17473173 GO_REF:0000107 NCBI chrNW_004936648:2,060,131...2,088,021
Ensembl chrNW_004936648:2,060,125...2,088,833 		JBrowse link
G Resp18 regulated endocrine specific protein 18 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21104147) Ensembl
MGI		 PMID:21104147 GO_REF:0000107 NCBI chrNW_004936569:1,731,756...1,737,679 JBrowse link
G Ric8a RIC8 guanine nucleotide exchange factor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16221497) Ensembl
MGI		 PMID:16221497 GO_REF:0000107 NCBI chrNW_004936888:57,212...62,722
Ensembl chrNW_004936888:56,811...63,776 		JBrowse link
G Rnaseh2b ribonuclease H2 subunit B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22802351) Ensembl
MGI		 PMID:22802351 GO_REF:0000107 NCBI chrNW_004936565:3,791,305...3,839,991
Ensembl chrNW_004936565:3,791,329...3,840,016 		JBrowse link
G Rpa1 replication protein A1 acts_upstream_of_or_within ISO (PMID:15470499) MGI PMID:15470499 NCBI chrNW_004936538:7,941,074...7,997,062
Ensembl chrNW_004936538:7,946,403...7,994,864 		JBrowse link
G Rpgrip1l RPGRIP1 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17553904) Ensembl
MGI		 PMID:17553904 GO_REF:0000107 NCBI chrNW_004936475:6,219,187...6,321,612
Ensembl chrNW_004936475:6,215,475...6,321,618 		JBrowse link
G Rrn3 RRN3 homolog, RNA polymerase I transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15989966) Ensembl
MGI		 PMID:15989966 GO_REF:0000107 NCBI chrNW_004936501:2,893,304...2,926,795
Ensembl chrNW_004936501:2,893,298...2,926,804 		JBrowse link
G Rtcb RNA 2',3'-cyclic phosphate and 5'-OH ligase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20510672) Ensembl
MGI		 PMID:20510672 GO_REF:0000107 NCBI chrNW_004936492:7,334,420...7,353,745
Ensembl chrNW_004936492:7,334,154...7,356,797 		JBrowse link
G Rundc1 RUN domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936490:17,680,077...17,690,864
Ensembl chrNW_004936490:17,680,073...17,690,870 		JBrowse link
G Rxra retinoid X receptor alpha acts_upstream_of_or_within ISO (PMID:9892670) MGI PMID:9892670 NCBI chrNW_004936669:2,735,111...2,763,060
Ensembl chrNW_004936669:2,738,448...2,763,070 		JBrowse link
G Rxrb retinoid X receptor beta acts_upstream_of_or_within ISO (PMID:9892670) MGI PMID:9892670 NCBI chrNW_004936476:25,655,164...25,662,369
Ensembl chrNW_004936476:25,655,209...25,662,416 		JBrowse link
G Sall4 spalt like transcription factor 4 acts_upstream_of_or_within ISO (PMID:17060609) MGI PMID:17060609 NCBI chrNW_004936514:3,285,778...3,302,179
Ensembl chrNW_004936514:3,285,531...3,303,644 		JBrowse link
G Sec24c SEC24 homolog C, COPII coat complex component acts_upstream_of_or_within ISO (PMID:24876386) MGI PMID:24876386 NCBI chrNW_004936521:5,374,555...5,402,123 JBrowse link
G Sec24d SEC24 homolog D, COPII coat complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23596517)
(PMID:24876386)		 Ensembl
MGI		 PMID:23596517 PMID:24876386 GO_REF:0000107 NCBI chrNW_004936869:485,706...566,591
Ensembl chrNW_004936869:522,706...563,704 		JBrowse link
G Sh3pxd2a SH3 and PX domains 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936600:2,343,709...2,513,497
Ensembl chrNW_004936600:2,343,658...2,509,612 		JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15998811) Ensembl
MGI		 PMID:15998811 GO_REF:0000107 NCBI chrNW_004936471:34,206,084...34,260,538
Ensembl chrNW_004936471:34,204,524...34,260,564 		JBrowse link
G Slc25a20 solute carrier family 25 member 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936529:607,035...631,872
Ensembl chrNW_004936529:606,804...631,991 		JBrowse link
G Slc30a1 solute carrier family 30 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15452870) Ensembl
MGI		 PMID:15452870 GO_REF:0000107 NCBI chrNW_004936557:1,789,263...1,796,548
Ensembl chrNW_004936557:1,789,263...1,796,541 		JBrowse link
G Slc34a2 solute carrier family 34 member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19233126) Ensembl
MGI		 PMID:19233126 GO_REF:0000107 NCBI chrNW_004936477:3,954,377...3,975,259
Ensembl chrNW_004936477:3,956,061...3,966,392 		JBrowse link
G Slc39a1 solute carrier family 39 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16652366) Ensembl
MGI		 PMID:16652366 GO_REF:0000107 NCBI chrNW_004936580:3,704,738...3,708,671
Ensembl chrNW_004936580:3,704,723...3,708,677 		JBrowse link
G Slc39a3 solute carrier family 39 member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16652366) Ensembl
MGI		 PMID:16652366 GO_REF:0000107 NCBI chrNW_004936588:1,583,884...1,590,656
Ensembl chrNW_004936588:1,584,061...1,588,983 		JBrowse link
G Slc5a7 solute carrier family 5 member 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936729:1,511,648...1,534,042
Ensembl chrNW_004936729:1,511,836...1,536,200 		JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within ISO (PMID:18829537) MGI PMID:18829537 NCBI chrNW_004936477:8,111,212...8,448,567
Ensembl chrNW_004936477:8,109,228...8,446,653 		JBrowse link
G Smad2 SMAD family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15183723)
(PMID:17849440)		 Ensembl
MGI		 PMID:15183723 PMID:17849440 GO_REF:0000107 NCBI chrNW_004936497:14,723,199...14,812,160
Ensembl chrNW_004936497:14,723,199...14,801,697 		JBrowse link
G Smad3 SMAD family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15183723) Ensembl
MGI		 PMID:15183723 GO_REF:0000107 NCBI chrNW_004936471:27,080,662...27,185,861
Ensembl chrNW_004936471:27,080,575...27,189,793 		JBrowse link
G Smad4 SMAD family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9420335) Ensembl
MGI		 PMID:9420335 GO_REF:0000107 NCBI chrNW_004936497:12,242,869...12,278,012
Ensembl chrNW_004936497:12,249,140...12,278,123 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (PMID:23319608)
(PMID:16287714)		 MGI PMID:16287714 PMID:23319608 NCBI chrNW_004936659:1,152,846...1,246,718
Ensembl chrNW_004936659:1,169,792...1,249,213 		JBrowse link
G Smg9 SMG9 nonsense mediated mRNA decay factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936706:908,471...929,075
Ensembl chrNW_004936706:908,867...929,305 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17881493) Ensembl
MGI		 PMID:17881493 GO_REF:0000107 NCBI chrNW_004936579:5,893,064...5,917,021
Ensembl chrNW_004936579:5,892,542...5,917,281 		JBrowse link
G Smpd4 sphingomyelin phosphodiesterase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936619:2,647,880...2,676,371
Ensembl chrNW_004936619:2,647,967...2,676,488 		JBrowse link
G Sox10 SRY-box transcription factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16790476) Ensembl
MGI		 PMID:16790476 GO_REF:0000107 NCBI chrNW_004936492:3,173,770...3,183,423
Ensembl chrNW_004936492:3,173,741...3,185,024 		JBrowse link
G Sox18 SRY-box transcription factor 18 involved_in
NOT|acts_upstream_of_or_within		 IEA
ISO		 (PMID:11094083)
(PMID:18931657)
(PMID:10742113)
(PMID:19429912)		 Ensembl
MGI		 PMID:10742113 PMID:11094083 PMID:18931657 PMID:19429912 GO_REF:0000107 NCBI chrNW_004936514:11,231,327...11,233,292
Ensembl chrNW_004936514:11,231,305...11,233,337 		JBrowse link
G Sox5 SRY-box transcription factor 5 acts_upstream_of_or_within ISO (PMID:17084361) MGI PMID:17084361 NCBI chrNW_004936548:3,213,305...3,599,876
Ensembl chrNW_004936548:3,213,466...3,599,425 		JBrowse link
G Sox6 SRY-box transcription factor 6 acts_upstream_of_or_within ISO (PMID:17084361) MGI PMID:17084361 NCBI chrNW_004936528:2,331,706...2,912,423
Ensembl chrNW_004936528:2,331,661...2,906,082 		JBrowse link
G Sox8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16790476) Ensembl
MGI		 PMID:16790476 GO_REF:0000107 NCBI chrNW_004936501:128,386...132,648
Ensembl chrNW_004936501:127,703...132,704 		JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO (PMID:17584888) MGI PMID:17584888 NCBI chrNW_004936512:10,655,116...10,693,025
Ensembl chrNW_004936512:10,655,349...10,693,042 		JBrowse link
G Sp2 Sp2 transcription factor acts_upstream_of_or_within ISO (PMID:20221402) MGI PMID:20221402 NCBI chrNW_004936490:13,392,082...13,421,159
Ensembl chrNW_004936490:13,391,844...13,421,159 		JBrowse link
G Sp3 Sp3 transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17584888) Ensembl
MGI		 PMID:17584888 GO_REF:0000107 NCBI chrNW_004936509:3,740,393...3,782,873
Ensembl chrNW_004936509:3,741,836...3,793,136 		JBrowse link
G Speg striated muscle enriched protein kinase acts_upstream_of_or_within ISO (PMID:19118250) MGI PMID:19118250 NCBI chrNW_004936569:1,821,125...1,877,006
Ensembl chrNW_004936569:1,821,143...1,876,156 		JBrowse link
G Srf serum response factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9799237) Ensembl
MGI		 PMID:9799237 GO_REF:0000107 NCBI chrNW_004936476:16,779,941...16,789,499
Ensembl chrNW_004936476:16,782,233...16,789,130 		JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 acts_upstream_of_or_within ISO (PMID:15652482) MGI PMID:15652482 NCBI chrNW_004936490:5,055,258...5,059,118
Ensembl chrNW_004936490:5,055,253...5,059,116 		JBrowse link
G Ssr2 signal sequence receptor subunit 2 acts_upstream_of_or_within ISO (PMID:27996060) MGI PMID:27996060 NCBI chrNW_004936580:5,270,411...5,277,435
Ensembl chrNW_004936580:5,270,384...5,276,732 		JBrowse link
G Stil STIL centriolar assembly protein acts_upstream_of_or_within ISO (PMID:10385121) MGI PMID:10385121 NCBI chrNW_004936474:28,079,114...28,131,214
Ensembl chrNW_004936474:28,079,492...28,131,198 		JBrowse link
G Syf2 SYF2 pre-mRNA splicing factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22448250) Ensembl
MGI		 PMID:22448250 GO_REF:0000107 NCBI chrNW_004936474:9,970,047...9,975,260
Ensembl chrNW_004936474:9,968,469...9,972,799 		JBrowse link
G Syvn1 synoviolin 1 acts_upstream_of_or_within ISO (PMID:15611074) MGI PMID:15611074 NCBI chrNW_004936599:4,235,779...4,243,395
Ensembl chrNW_004936599:4,236,188...4,243,394 		JBrowse link
G Tab1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12464436) Ensembl
MGI		 PMID:12464436 GO_REF:0000107 NCBI chrNW_004936492:2,207,147...2,234,573
Ensembl chrNW_004936492:2,210,197...2,234,489 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:667,960...669,367
Ensembl chrNW_004936842:667,936...669,441 		JBrowse link
G Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21068316) Ensembl
MGI		 PMID:21068316 GO_REF:0000107 NCBI chrNW_004936541:3,702,743...4,115,009
Ensembl chrNW_004936541:3,744,687...4,115,007 		JBrowse link
G Tbx3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17473172) Ensembl
MGI		 PMID:17473172 GO_REF:0000107 NCBI chrNW_004936558:7,230,361...7,243,651
Ensembl chrNW_004936558:7,230,668...7,244,361 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:27996060) MGI PMID:27996060 NCBI chrNW_004936486:3,473,877...3,660,565
Ensembl chrNW_004936486:3,473,843...3,660,576 		JBrowse link
G Tctn1 tectonic family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16357211) Ensembl
MGI		 PMID:16357211 GO_REF:0000107 NCBI chrNW_004936558:3,552,909...3,581,212
Ensembl chrNW_004936558:3,552,864...3,581,368 		JBrowse link
G Tead4 TEA domain transcription factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18083014) Ensembl
MGI		 PMID:18083014 GO_REF:0000107 NCBI chrNW_004936606:3,310,905...3,358,519
Ensembl chrNW_004936606:3,310,823...3,356,509 		JBrowse link
G Tent5c terminal nucleotidyltransferase 5C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936627:2,709,633...2,728,568
Ensembl chrNW_004936627:2,709,633...2,728,568 		JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15968270) Ensembl
MGI		 PMID:15968270 GO_REF:0000107 NCBI chrNW_004936475:19,469,501...19,498,494
Ensembl chrNW_004936475:19,468,702...19,498,793 		JBrowse link
G Tgfb3 transforming growth factor beta 3 acts_upstream_of_or_within ISO (PMID:14729481) MGI PMID:14729481 NCBI chrNW_004936488:4,986,712...5,008,728
Ensembl chrNW_004936488:4,986,748...5,008,496 		JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17078885)
(PMID:11285230)
(PMID:14729481)		 Ensembl
MGI		 PMID:11285230 PMID:14729481 PMID:17078885 GO_REF:0000107 NCBI chrNW_004936524:7,656,523...7,680,043
Ensembl chrNW_004936524:7,655,847...7,681,097 		JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18990706)
(PMID:10030593)		 Ensembl
MGI		 PMID:10030593 PMID:18990706 GO_REF:0000107 NCBI chrNW_004936473:21,324,669...21,409,430
Ensembl chrNW_004936473:21,324,658...21,409,430 		JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 acts_upstream_of_or_within ISO (PMID:17704211) MGI PMID:17704211 NCBI chrNW_004936537:7,154,125...7,340,218
Ensembl chrNW_004936537:7,175,516...7,336,895 		JBrowse link
G Tie1 tyrosine kinase with immunoglobulin like and EGF like domains 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11172728) Ensembl
MGI		 PMID:11172728 GO_REF:0000107 NCBI chrNW_004936474:24,709,424...24,729,246
Ensembl chrNW_004936474:24,709,424...24,729,245 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20178780) Ensembl
MGI		 PMID:20178780 GO_REF:0000107 NCBI chrNW_004936558:1,223,114...1,258,699
Ensembl chrNW_004936558:1,223,114...1,231,479 		JBrowse link
G Tmem100 transmembrane protein 100 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22783020)
(PMID:20848592)		 Ensembl
MGI		 PMID:20848592 PMID:22783020 GO_REF:0000107 NCBI chrNW_004936490:6,958,064...6,963,888
Ensembl chrNW_004936490:6,958,096...6,964,536 		JBrowse link
G Tmem231 transmembrane protein 231 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22179047) Ensembl
MGI		 PMID:22179047 GO_REF:0000107 NCBI chrNW_004936475:24,215,817...24,232,689
Ensembl chrNW_004936475:24,215,659...24,232,947 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
NOT|acts_upstream_of_or_within		 IEA
ISO		 (PMID:9288110)
(PMID:26334721)
(PMID:17325035)
(PMID:9425892)		 Ensembl
MGI		 PMID:9288110 PMID:9425892 PMID:17325035 PMID:26334721 GO_REF:0000107 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425 		JBrowse link
G Tpm1 tropomyosin 1 acts_upstream_of_or_within ISO (PMID:9440710) MGI PMID:9440710 NCBI chrNW_004936471:23,643,645...23,670,775
Ensembl chrNW_004936471:23,643,613...23,670,775 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936533:1,857,685...1,874,973
Ensembl chrNW_004936533:1,857,666...1,876,120 		JBrowse link
G Trim28 tripartite motif containing 28 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22442485) Ensembl
MGI		 PMID:22442485 GO_REF:0000107 NCBI chrNW_004937062:126,832...132,938
Ensembl chrNW_004937062:126,708...134,366 		JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 acts_upstream_of_or_within ISO (PMID:18776146) MGI PMID:18776146 NCBI chrNW_004936570:4,250,988...4,255,789
Ensembl chrNW_004936570:4,195,428...4,255,868 		JBrowse link
G Ttn titin acts_upstream_of_or_within ISO (PMID:16702235) MGI PMID:16702235 NCBI chrNW_004936509:7,733,426...7,999,503 JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15030764) Ensembl
MGI		 PMID:15030764 GO_REF:0000107 NCBI chrNW_004936546:5,331,220...5,332,669
Ensembl chrNW_004936546:5,331,863...5,332,555 		JBrowse link
G Ube2a ubiquitin conjugating enzyme E2 A NOT|acts_upstream_of_or_within ISO (PMID:15169909) MGI PMID:15169909 NCBI chrNW_004936479:10,330,666...10,340,268
Ensembl chrNW_004936479:10,330,632...10,340,367 		JBrowse link
G Ube2b ubiquitin conjugating enzyme E2 B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15169909) Ensembl
MGI		 PMID:15169909 GO_REF:0000107 NCBI chrNW_004936647:891,357...913,963
Ensembl chrNW_004936647:891,996...911,033 		JBrowse link
G Ubr3 ubiquitin protein ligase E3 component n-recognin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17462990) Ensembl
MGI		 PMID:17462990 GO_REF:0000107 NCBI chrNW_004936509:325,277...537,423
Ensembl chrNW_004936509:324,953...535,141 		JBrowse link
G Unk unk zinc finger involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27996060) Ensembl
MGI		 PMID:27996060 GO_REF:0000107 NCBI chrNW_004936594:967,386...1,005,085
Ensembl chrNW_004936594:967,448...1,004,966 		JBrowse link
G Upb1 beta-ureidopropionase 1 ISO RGD PMID:6870258 RGD:2317093 NCBI chrNW_004936619:668,380...713,720
Ensembl chrNW_004936619:668,351...696,306 		JBrowse link
G Upf3a UPF3A regulator of nonsense mediated mRNA decay acts_upstream_of ISO (PMID:27040500) MGI PMID:27040500 NCBI chrNW_004937030:243,104...258,355 JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked acts_upstream_of_or_within ISO (PMID:23861879) MGI PMID:23861879 NCBI chrNW_004936502:7,649,808...7,732,731
Ensembl chrNW_004936502:7,649,842...7,735,382 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10229225) Ensembl
MGI		 PMID:10229225 GO_REF:0000107 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673 		JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:8,835,397...8,922,403
Ensembl chrNW_004936491:8,833,285...8,922,711 		JBrowse link
G Wdr19 WD repeat domain 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22228095) Ensembl
MGI		 PMID:22228095 GO_REF:0000107 NCBI chrNW_004936482:6,863,592...6,937,810
Ensembl chrNW_004936482:6,863,571...6,937,979 		JBrowse link
G Wdtc1 WD and tetratricopeptide repeats 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17767906) Ensembl
MGI		 PMID:17767906 GO_REF:0000107 NCBI chrNW_004936474:11,565,535...11,631,660
Ensembl chrNW_004936474:11,565,479...11,634,214 		JBrowse link
G Wnt3a Wnt family member 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:4819561) Ensembl
MGI		 PMID:4819561 GO_REF:0000107 NCBI chrNW_004936864:150,742...179,205
Ensembl chrNW_004936864:150,732...192,423 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO (PMID:18367557) MGI PMID:18367557 NCBI chrNW_004936629:3,869,976...3,907,932
Ensembl chrNW_004936629:3,869,523...3,909,808 		JBrowse link
G Wnt9b Wnt family member 9B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16054034) Ensembl
MGI		 PMID:16054034 GO_REF:0000107 NCBI chrNW_004936541:1,899,039...1,939,561
Ensembl chrNW_004936541:1,899,039...1,939,561 		JBrowse link
G Xrcc2 X-ray repair cross complementing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16777961) Ensembl
MGI		 PMID:16777961 GO_REF:0000107 NCBI chrNW_004936527:7,760,609...7,785,360
Ensembl chrNW_004936527:7,760,719...7,785,391 		JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (PMID:9875844) MGI PMID:9875844 NCBI chrNW_004936469:2,248,367...2,495,215
Ensembl chrNW_004936469:2,248,039...2,495,226 		JBrowse link
G Ybx1 Y-box binding protein 1 acts_upstream_of_or_within ISO (PMID:16954378) MGI PMID:16954378 NCBI chrNW_004936474:24,026,459...24,047,724
Ensembl chrNW_004936474:24,026,377...24,047,724 		JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29799838) Ensembl
MGI		 PMID:29799838 GO_REF:0000107 NCBI chrNW_004936582:130,593...161,275
Ensembl chrNW_004936582:126,736...161,586 		JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO (PMID:19409883) MGI PMID:19409883 NCBI chrNW_004936526:6,706,035...6,714,011
Ensembl chrNW_004936526:6,705,983...6,712,281 		JBrowse link
G Zfand5 zinc finger AN1-type containing 5 acts_upstream_of_or_within ISO (PMID:17143286) MGI PMID:17143286 NCBI chrNW_004936503:8,377,544...8,382,530 JBrowse link
G Zfp42 ZFP42 zinc finger protein acts_upstream_of_or_within ISO (PMID:21233130) MGI PMID:21233130 NCBI chrNW_004936554:1,786,355...1,787,125 JBrowse link
G Zfpm2 zinc finger protein, FOG family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16103912) Ensembl
MGI		 PMID:16103912 GO_REF:0000107 NCBI chrNW_004936470:38,432,894...38,857,656
Ensembl chrNW_004936470:38,432,897...38,857,662 		JBrowse link
G Zmiz1 zinc finger MIZ-type containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17967885) Ensembl
MGI		 PMID:17967885 GO_REF:0000107 NCBI chrNW_004936521:444,599...664,533
Ensembl chrNW_004936521:444,598...581,800 		JBrowse link
G Znf335 zinc finger protein 335 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23178126) Ensembl
MGI		 PMID:23178126 GO_REF:0000107 NCBI chrNW_004936514:7,070,030...7,090,466
Ensembl chrNW_004936514:7,072,554...7,090,183 		JBrowse link
initiation of neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdm2b lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:2,771,420...2,897,694
Ensembl chrNW_004936558:2,771,420...2,897,292 		JBrowse link
inner cell mass cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24036311) Ensembl
MGI		 PMID:24036311 GO_REF:0000107 NCBI chrNW_004936528:7,585,937...7,613,022
Ensembl chrNW_004936528:7,585,787...7,613,047 		JBrowse link
G Hnf1b HNF1 homeobox B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10518496) Ensembl
MGI		 PMID:10518496 GO_REF:0000107 NCBI chrNW_004936490:649,551...702,448
Ensembl chrNW_004936490:649,546...702,672 		JBrowse link
G LOC101960775 cell division cycle and apoptosis regulator protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:9,573,918...9,624,469
Ensembl chrNW_004936521:9,569,760...9,625,236
Ensembl chrNW_004936521:9,569,760...9,625,236 		JBrowse link
G Nle1 notchless homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16611995) Ensembl
MGI		 PMID:16611995 GO_REF:0000107 NCBI chrNW_004936538:101,245...109,796
Ensembl chrNW_004936538:101,047...109,873 		JBrowse link
inner cell mass cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lats1 large tumor suppressor kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23824537) Ensembl
MGI		 PMID:23824537 GO_REF:0000107 NCBI chrNW_004936489:2,607,114...2,649,879
Ensembl chrNW_004936489:2,605,195...2,649,879 		JBrowse link
G Lats2 large tumor suppressor kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23824537) Ensembl
MGI		 PMID:23824537 GO_REF:0000107 NCBI chrNW_004936720:735,326...795,596
Ensembl chrNW_004936720:735,524...793,696 		JBrowse link
G Prdm14 PR/SET domain 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24183668) Ensembl
MGI		 PMID:24183668 GO_REF:0000107 NCBI chrNW_004936496:14,789,443...14,820,967
Ensembl chrNW_004936496:14,806,928...14,820,967 		JBrowse link
inner cell mass cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (PMID:9171369) MGI PMID:9171369 NCBI chrNW_004936472:26,945,659...27,017,693 JBrowse link
G Brd4 bromodomain containing 4 acts_upstream_of_or_within ISO (PMID:11997514) MGI PMID:11997514 NCBI chrNW_004936596:5,176,682...5,246,102
Ensembl chrNW_004936596:5,177,147...5,246,518 		JBrowse link
G Chek1 checkpoint kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10859163) Ensembl
MGI		 PMID:10859163 GO_REF:0000107 NCBI chrNW_004936743:2,004,535...2,027,287
Ensembl chrNW_004936743:2,005,851...2,026,587 		JBrowse link
G Cops2 COP9 signalosome subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12972599) Ensembl
MGI		 PMID:12972599 GO_REF:0000107 NCBI chrNW_004936471:11,412,147...11,437,056
Ensembl chrNW_004936471:11,410,543...11,437,096 		JBrowse link
G Gins1 GINS complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16287864) Ensembl
MGI		 PMID:16287864 GO_REF:0000107 NCBI chrNW_004936620:421,845...446,853
Ensembl chrNW_004936620:422,230...446,753 		JBrowse link
G Gins4 GINS complex subunit 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24244394) Ensembl
MGI		 PMID:24244394 GO_REF:0000107 NCBI chrNW_004936785:1,043,342...1,059,635
Ensembl chrNW_004936785:1,043,143...1,059,636 		JBrowse link
G Ints1 integrator complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17544522) Ensembl
MGI		 PMID:17544522 GO_REF:0000107 NCBI chrNW_004936754:1,597,574...1,626,578
Ensembl chrNW_004936754:1,597,575...1,626,398 		JBrowse link
G LOC101959402 deleted in malignant brain tumors 1 protein acts_upstream_of_or_within ISO (PMID:15452149) MGI PMID:15452149 NCBI chrNW_004936486:11,377,485...11,545,624 JBrowse link
G Ncapg2 non-SMC condensin II complex subunit G2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14729962) Ensembl
MGI		 PMID:14729962 GO_REF:0000107 NCBI chrNW_004936856:567,765...625,745
Ensembl chrNW_004936856:567,306...625,800 		JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 acts_upstream_of_or_within ISO (PMID:16107726) MGI PMID:16107726 NCBI chrNW_004936595:1,656,956...1,692,775
Ensembl chrNW_004936595:1,656,956...1,689,322 		JBrowse link
G Palb2 partner and localizer of BRCA2 acts_upstream_of_or_within ISO (PMID:20484223) MGI PMID:20484223 NCBI chrNW_004936501:8,246,927...8,273,258 JBrowse link
G Pelo pelota mRNA surveillance and ribosome rescue factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12556505) Ensembl
MGI		 PMID:12556505 GO_REF:0000107 NCBI chrNW_004936480:14,578,718...14,580,690
Ensembl chrNW_004936480:14,577,381...14,582,144 		JBrowse link
G Sall4 spalt like transcription factor 4 acts_upstream_of_or_within ISO (PMID:16790473) MGI PMID:16790473 NCBI chrNW_004936514:3,285,778...3,302,179
Ensembl chrNW_004936514:3,285,531...3,303,644 		JBrowse link
G Sbds SBDS ribosome maturation factor acts_upstream_of_or_within ISO (PMID:16914746) MGI PMID:16914746 NCBI chrNW_004936543:7,324,748...7,329,774 JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 acts_upstream_of_or_within ISO (PMID:14993285) MGI PMID:14993285 NCBI chrNW_004936580:1,146,286...1,192,842
Ensembl chrNW_004936580:1,146,277...1,192,842 		JBrowse link
G Taf8 TATA-box binding protein associated factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11076765) Ensembl
MGI		 PMID:11076765 GO_REF:0000107 NCBI chrNW_004936476:17,779,474...17,798,465
Ensembl chrNW_004936476:17,779,242...17,798,505 		JBrowse link
G Zpr1 ZPR1 zinc finger involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:2,058,048...2,067,468
Ensembl chrNW_004936542:2,056,905...2,067,542 		JBrowse link
inner cell mass cellular morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lats1 large tumor suppressor kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23824537) Ensembl
MGI		 PMID:23824537 GO_REF:0000107 NCBI chrNW_004936489:2,607,114...2,649,879
Ensembl chrNW_004936489:2,605,195...2,649,879 		JBrowse link
G Lats2 large tumor suppressor kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23824537) Ensembl
MGI		 PMID:23824537 GO_REF:0000107 NCBI chrNW_004936720:735,326...795,596
Ensembl chrNW_004936720:735,524...793,696 		JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21146513) Ensembl
MGI		 PMID:21146513 GO_REF:0000107 NCBI chrNW_004936496:1,248,582...1,251,406
Ensembl chrNW_004936496:1,248,577...1,251,430 		JBrowse link
labyrinthine layer blood vessel development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12783884) Ensembl
MGI		 PMID:12783884 GO_REF:0000107 NCBI chrNW_004936621:620,163...639,115
Ensembl chrNW_004936621:620,074...639,093 		JBrowse link
G Ccn1 cellular communication network factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12446788) Ensembl
MGI		 PMID:12446788 GO_REF:0000107 NCBI chrNW_004936608:152,174...155,123
Ensembl chrNW_004936608:151,838...155,358 		JBrowse link
G Esx1 ESX homeobox 1 acts_upstream_of_or_within ISO (PMID:9806555) MGI PMID:9806555 NCBI chrNW_004936499:10,151,988...10,156,349 JBrowse link
G Fbxw8 F-box and WD repeat domain containing 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16880526) Ensembl
MGI		 PMID:16880526 GO_REF:0000107 NCBI chrNW_004936558:5,423,815...5,523,649
Ensembl chrNW_004936558:5,421,976...5,523,676 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11092808) Ensembl
MGI		 PMID:11092808 GO_REF:0000107 NCBI chrNW_004936631:3,909,046...3,915,939
Ensembl chrNW_004936631:3,911,693...3,915,560 		JBrowse link
G Ggnbp2 gametogenetin binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26764350) Ensembl
MGI		 PMID:26764350 GO_REF:0000107 NCBI chrNW_004936490:1,635,443...1,671,057
Ensembl chrNW_004936490:1,635,443...1,671,089 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936711:640,002...642,580
Ensembl chrNW_004936711:639,905...642,622 		JBrowse link
G Hey1 hes related family bHLH transcription factor with YRPW motif 1 involved_in ISO (MGI:3040159|PMID:15107403) BHF-UCL PMID:15107403 MGI:3040159 NCBI chrNW_004936871:666,961...670,910
Ensembl chrNW_004936871:666,938...670,916 		JBrowse link
G Hey2 hes related family bHLH transcription factor with YRPW motif 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936639:3,705,225...3,714,696
Ensembl chrNW_004936639:3,703,447...3,716,820 		JBrowse link
G Hs6st1 heparan sulfate 6-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17405882) Ensembl
MGI		 PMID:17405882 GO_REF:0000107 NCBI chrNW_004936469:43,039,494...43,086,041
Ensembl chrNW_004936469:43,039,488...43,087,768 		JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10022836) Ensembl
MGI		 PMID:10022836 GO_REF:0000107 NCBI chrNW_004936659:1,890,786...1,892,619
Ensembl chrNW_004936659:1,891,080...1,892,123 		JBrowse link
G Llgl2 LLGL scribble cell polarity complex component 2 acts_upstream_of_or_within ISO (PMID:21606200) MGI PMID:21606200 NCBI chrNW_004936594:754,140...792,493
Ensembl chrNW_004936594:765,310...792,155 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14622137) Ensembl
MGI		 PMID:14622137 GO_REF:0000107 NCBI chrNW_004936619:1,889,841...1,932,646
Ensembl chrNW_004936619:1,889,708...1,932,646 		JBrowse link
G Ncoa6 nuclear receptor coactivator 6 acts_upstream_of_or_within ISO (PMID:12556486)
(PMID:12368298)		 MGI PMID:12368298 PMID:12556486 NCBI chrNW_004936561:5,905,905...5,982,824
Ensembl chrNW_004936561:5,906,485...5,982,268 		JBrowse link
G Nfe2 nuclear factor, erythroid 2 acts_upstream_of_or_within ISO (PMID:21558372) MGI PMID:21558372 NCBI chrNW_004936512:11,490,521...11,493,655
Ensembl chrNW_004936512:11,490,168...11,493,974 		JBrowse link
G Nsdhl NAD(P) dependent steroid dehydrogenase-like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17028112) Ensembl
MGI		 PMID:17028112 GO_REF:0000107 NCBI chrNW_004936714:246,574...273,930
Ensembl chrNW_004936714:246,551...273,912 		JBrowse link
G Ovol2 ovo like zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17573777) Ensembl
MGI		 PMID:17573777 GO_REF:0000107 NCBI chrNW_004936485:2,096,495...2,128,002
Ensembl chrNW_004936485:2,096,495...2,128,540 		JBrowse link
G Plcd1 phospholipase C delta 1 acts_upstream_of_or_within ISO (PMID:16314520) MGI PMID:16314520 NCBI chrNW_004936473:27,364,404...27,387,337
Ensembl chrNW_004936473:27,364,389...27,387,412 		JBrowse link
G Plcd3 phospholipase C delta 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16314520) Ensembl
MGI		 PMID:16314520 GO_REF:0000107 NCBI chrNW_004936541:1,426,590...1,446,286
Ensembl chrNW_004936541:1,426,580...1,446,286 		JBrowse link
G Plg plasminogen involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12900459) Ensembl
MGI		 PMID:12900459 GO_REF:0000107 NCBI chrNW_004936489:11,775,243...11,808,482
Ensembl chrNW_004936489:11,775,243...11,805,651 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:3,354,336...3,445,248
Ensembl chrNW_004936477:3,349,627...3,461,797 		JBrowse link
G Syde1 synapse defective Rho GTPase homolog 1 acts_upstream_of_or_within ISO (PMID:27917469) MGI PMID:27917469 NCBI chrNW_004936596:5,352,813...5,359,561
Ensembl chrNW_004936596:5,349,776...5,359,538 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:1,223,114...1,258,699
Ensembl chrNW_004936558:1,223,114...1,231,479 		JBrowse link
G Vash1 vasohibin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25184477) Ensembl
MGI		 PMID:25184477 GO_REF:0000107 NCBI chrNW_004936488:5,675,788...5,696,198
Ensembl chrNW_004936488:5,675,782...5,696,222 		JBrowse link
G Vash2 vasohibin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25184477) Ensembl
MGI		 PMID:25184477 GO_REF:0000107 NCBI chrNW_004936557:622,947...661,495
Ensembl chrNW_004936557:623,934...661,857 		JBrowse link
G Wnt2 Wnt family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8951051) Ensembl
MGI		 PMID:8951051 GO_REF:0000107 NCBI chrNW_004936589:1,825,209...1,866,898
Ensembl chrNW_004936589:1,825,209...1,866,889 		JBrowse link
labyrinthine layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Birc6 baculoviral IAP repeat containing 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15485903) Ensembl
MGI		 PMID:15485903 GO_REF:0000107 NCBI chrNW_004936493:903,295...1,115,434
Ensembl chrNW_004936493:899,961...1,115,493 		JBrowse link
G Cdx2 caudal type homeobox 2 acts_upstream_of_or_within ISO (PMID:19853565) MGI PMID:19853565 NCBI chrNW_004936472:23,137,936...23,141,205 JBrowse link
G Cdx4 caudal type homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19853565) Ensembl
MGI		 PMID:19853565 GO_REF:0000107 NCBI chrNW_004936683:297,112...305,506
Ensembl chrNW_004936683:297,112...305,506 		JBrowse link
G Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14673158) Ensembl
MGI		 PMID:14673158 GO_REF:0000107 NCBI chrNW_004936762:1,387,354...1,392,955
Ensembl chrNW_004936762:1,387,346...1,391,967 		JBrowse link
G Egln1 egl-9 family hypoxia inducible factor 1 acts_upstream_of_or_within ISO (PMID:16966370) MGI PMID:16966370 NCBI chrNW_004936484:19,343,770...19,386,087 JBrowse link
G Gab1 GRB2 associated binding protein 1 acts_upstream_of_or_within ISO (PMID:10779359) MGI PMID:10779359 NCBI chrNW_004936535:4,934,743...5,048,698
Ensembl chrNW_004936535:4,932,261...5,048,693 		JBrowse link
G Ggnbp2 gametogenetin binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26764350) Ensembl
MGI		 PMID:26764350 GO_REF:0000107 NCBI chrNW_004936490:1,635,443...1,671,057
Ensembl chrNW_004936490:1,635,443...1,671,089 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10209122) Ensembl
MGI		 PMID:10209122 GO_REF:0000107 NCBI chrNW_004936471:26,589,251...26,628,302
Ensembl chrNW_004936471:26,589,161...26,628,302 		JBrowse link
G Pcdh12 protocadherin 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18477666) Ensembl
MGI		 PMID:18477666 GO_REF:0000107 NCBI chrNW_004936504:12,226,771...12,244,959
Ensembl chrNW_004936504:12,229,995...12,242,487 		JBrowse link
G Rtl1 retrotransposon Gag like 1 acts_upstream_of_or_within ISO (PMID:26138477)
(PMID:28111885)		 MGI PMID:26138477 PMID:28111885 NCBI chrNW_004936604:4,648,928...4,655,418 JBrowse link
G Senp2 SUMO specific peptidase 2 acts_upstream_of_or_within ISO (PMID:19090619) MGI PMID:19090619 NCBI chrNW_004936578:4,252,718...4,290,452
Ensembl chrNW_004936578:4,248,244...4,290,418 		JBrowse link
G Syde1 synapse defective Rho GTPase homolog 1 acts_upstream_of_or_within ISO (PMID:27917469) MGI PMID:27917469 NCBI chrNW_004936596:5,352,813...5,359,561
Ensembl chrNW_004936596:5,349,776...5,359,538 		JBrowse link
G Vash2 vasohibin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25184477) Ensembl
MGI		 PMID:25184477 GO_REF:0000107 NCBI chrNW_004936557:622,947...661,495
Ensembl chrNW_004936557:623,934...661,857 		JBrowse link
labyrinthine layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esx1 ESX homeobox 1 acts_upstream_of_or_within ISO (PMID:9806555) MGI PMID:9806555 NCBI chrNW_004936499:10,151,988...10,156,349 JBrowse link
G Gjb5 gap junction protein beta 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17961533) Ensembl
MGI		 PMID:17961533 GO_REF:0000107 NCBI chrNW_004936474:17,402,804...17,406,080
Ensembl chrNW_004936474:17,405,000...17,405,809 		JBrowse link
G Ncoa1 nuclear receptor coactivator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20685850) Ensembl
MGI		 PMID:20685850 GO_REF:0000107 NCBI chrNW_004936493:7,368,393...7,605,754
Ensembl chrNW_004936493:7,368,462...7,465,615 		JBrowse link
G Ncoa3 nuclear receptor coactivator 3 acts_upstream_of_or_within ISO (PMID:20685850) MGI PMID:20685850 NCBI chrNW_004936514:5,900,135...5,967,862
Ensembl chrNW_004936514:5,901,601...5,967,865 		JBrowse link
midbrain-hindbrain boundary development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G En1 engrailed homeobox 1 acts_upstream_of_or_within ISO (PMID:15607945) MGI PMID:15607945 NCBI chrNW_004936469:51,439,944...51,451,194 JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17601531) Ensembl
MGI		 PMID:17601531 GO_REF:0000107 NCBI chrNW_004936600:4,004,847...4,010,626
Ensembl chrNW_004936600:4,004,824...4,010,689 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16651541) Ensembl
MGI		 PMID:16651541 GO_REF:0000107 NCBI chrNW_004936525:1,870,211...1,873,536
Ensembl chrNW_004936525:1,870,195...1,873,539 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:11029008), (PMID:19795512) MGI PMID:11029008 PMID:19795512 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191 		JBrowse link
G Wnt1 Wnt family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:2205396) Ensembl
MGI		 PMID:2205396 GO_REF:0000107 NCBI chrNW_004936512:6,781,001...6,785,358
Ensembl chrNW_004936512:6,780,882...6,785,358 		JBrowse link
midbrain-hindbrain boundary initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssbp3 single stranded DNA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:6,802,057...6,957,640
Ensembl chrNW_004936522:6,802,052...6,956,129 		JBrowse link
midbrain-hindbrain boundary maturation during brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 Wnt family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8555108) Ensembl
MGI		 PMID:8555108 GO_REF:0000107 NCBI chrNW_004936512:6,781,001...6,785,358
Ensembl chrNW_004936512:6,780,882...6,785,358 		JBrowse link
midbrain-hindbrain boundary morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbx2 gastrulation brain homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16651541) Ensembl
MGI		 PMID:16651541 GO_REF:0000107 NCBI chrNW_004936525:1,870,211...1,873,536
Ensembl chrNW_004936525:1,870,195...1,873,539 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11500373) Ensembl
MGI		 PMID:11500373 GO_REF:0000107 NCBI chrNW_004936711:640,002...642,580
Ensembl chrNW_004936711:639,905...642,622 		JBrowse link
G Hes3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO (PMID:11522634) MGI PMID:11522634 NCBI chrNW_004936623:1,096,519...1,098,175
Ensembl chrNW_004936623:1,096,870...1,097,858 		JBrowse link
G Kdm2b lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:2,771,420...2,897,694
Ensembl chrNW_004936558:2,771,420...2,897,292 		JBrowse link
negative regulation of cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elf5 E74 like ETS transcription factor 5 acts_upstream_of_or_within ISO (PMID:24859262) MGI PMID:24859262 NCBI chrNW_004936533:3,569,435...3,595,991
Ensembl chrNW_004936533:3,569,452...3,596,004 		JBrowse link
G Snai1 snail family transcriptional repressor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9676199) Ensembl
MGI		 PMID:9676199 GO_REF:0000107 NCBI chrNW_004936514:4,456,498...4,462,436
Ensembl chrNW_004936514:4,456,484...4,462,987 		JBrowse link
negative regulation of neural crest formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fuz fuzzy planar cell polarity protein involved_in ISO (MGI:5498583|PMID:23806618) UniProt PMID:23806618 MGI:5498583 NCBI chrNW_004936664:3,596,764...3,601,676
Ensembl chrNW_004936664:3,596,952...3,601,342 		JBrowse link
negative regulation of Notch signaling pathway involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936823:283,207...290,970
Ensembl chrNW_004936823:283,205...290,986 		JBrowse link
negative regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19056682) MGI PMID:19056682 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191 		JBrowse link
negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr161 G protein-coupled receptor 161 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:18,097,704...18,130,023
Ensembl chrNW_004936481:18,097,692...18,129,873 		JBrowse link
neural crest cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edn1 endothelin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:885,489...892,292
Ensembl chrNW_004936534:885,287...891,772 		JBrowse link
G Ednra endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:1,950,117...2,005,786
Ensembl chrNW_004936535:1,949,941...2,005,910 		JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20130188) Ensembl
MGI		 PMID:20130188 GO_REF:0000107 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017 		JBrowse link
neural crest cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsc goosecoid homeobox involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936846:286,429...288,405
Ensembl chrNW_004936846:286,420...288,405 		JBrowse link
neural crest formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrd chordin involved_in ISO (PMID:17685487) MGI PMID:17685487 NCBI chrNW_004936578:5,498,473...5,507,195
Ensembl chrNW_004936578:5,498,887...5,507,198 		JBrowse link
G Kbtbd8 kelch repeat and BTB domain containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936603:44,960...60,494
Ensembl chrNW_004936603:44,948...54,255 		JBrowse link
G Klhl12 kelch like family member 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:1,681,421...1,714,150
Ensembl chrNW_004936567:1,680,286...1,716,235 		JBrowse link
G Lrp6 LDL receptor related protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191 		JBrowse link
G Nolc1 nucleolar and coiled-body phosphoprotein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936600:3,676,540...3,686,674
Ensembl chrNW_004936600:3,676,314...3,686,763 		JBrowse link
G Pdcd6 programmed cell death 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936815:1,129,367...1,144,020
Ensembl chrNW_004936815:1,129,352...1,143,992 		JBrowse link
G Pef1 penta-EF-hand domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:14,745,812...14,761,279
Ensembl chrNW_004936474:14,745,677...14,761,395 		JBrowse link
G Tcof1 treacle ribosome biogenesis factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:4,533,993...4,569,997
Ensembl chrNW_004936504:4,533,981...4,570,055 		JBrowse link
neural fold bending term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Luzp1 leucine zipper protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18801334) Ensembl
MGI
TreeGrafter		 PMID:18801334 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:8,320,284...8,413,919
Ensembl chrNW_004936474:8,324,076...8,328,829 		JBrowse link
neural fold elevation formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp5 bone morphogenetic protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:5,350,870...5,464,561
Ensembl chrNW_004936476:5,350,870...5,464,354 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:71,965...143,940
Ensembl chrNW_004936530:71,920...143,940 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10328919) Ensembl
MGI		 PMID:10328919 GO_REF:0000107 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157 		JBrowse link
neural fold formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfl1 cofilin 1 acts_upstream_of_or_within ISO (PMID:15649475) MGI PMID:15649475 NCBI chrNW_004936599:3,678,724...3,682,314
Ensembl chrNW_004936599:3,677,804...3,682,307 		JBrowse link
G Gatad2a GATA zinc finger domain containing 2A acts_upstream_of_or_within ISO (PMID:17565372) MGI PMID:17565372 NCBI chrNW_004936596:1,958,961...2,074,471
Ensembl chrNW_004936596:1,958,844...2,074,707 		JBrowse link
G LOC101956240 cat eye syndrome critical region protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21246654) Ensembl
MGI		 PMID:21246654 GO_REF:0000107 NCBI chrNW_004936807:498,491...542,503
Ensembl chrNW_004936807:498,789...542,008 		JBrowse link
G Nodal nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11311163) Ensembl
MGI		 PMID:11311163 GO_REF:0000107 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705 		JBrowse link
G Ovol2 ovo like zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16423343) Ensembl
MGI		 PMID:16423343 GO_REF:0000107 NCBI chrNW_004936485:2,096,495...2,128,002
Ensembl chrNW_004936485:2,096,495...2,128,540 		JBrowse link
neural plate axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C2cd3 C2 domain containing 3 centriole elongation regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19004860) Ensembl
MGI		 PMID:19004860 GO_REF:0000107 NCBI chrNW_004936498:3,099,419...3,242,334
Ensembl chrNW_004936498:3,099,396...3,242,335 		JBrowse link
G Ptch1 patched 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:4,241,993...4,301,919
Ensembl chrNW_004936626:4,241,908...4,309,476 		JBrowse link
neural plate development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22102609) Ensembl
MGI		 PMID:22102609 GO_REF:0000107 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293 		JBrowse link
G Zic2 Zic family member 2 involved_in ISO (PMID:17490632) MGI PMID:17490632 NCBI chrNW_004936472:10,599,717...10,605,187
Ensembl chrNW_004936472:10,602,102...10,605,191 		JBrowse link
G Zic3 Zic family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936513:9,780,895...9,792,865
Ensembl chrNW_004936513:9,786,709...9,793,077 		JBrowse link
neural plate formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101966195 huntingtin acts_upstream_of_or_within ISO (PMID:7774020) MGI PMID:7774020 NCBI chrNW_004936477:20,443,101...20,577,167
Ensembl chrNW_004936477:20,443,113...20,577,071
Ensembl chrNW_004936477:20,443,113...20,577,071 		JBrowse link
neural plate morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18794329)
(PMID:17507402)		 Ensembl
MGI		 PMID:17507402 PMID:18794329 GO_REF:0000107 NCBI chrNW_004936469:50,329,564...50,443,532
Ensembl chrNW_004936469:50,329,409...50,443,626 		JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16613831) Ensembl
MGI		 PMID:16613831 GO_REF:0000107 NCBI chrNW_004936600:4,004,847...4,010,626
Ensembl chrNW_004936600:4,004,824...4,010,689 		JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16712836) Ensembl
MGI		 PMID:16712836 GO_REF:0000107 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483 		JBrowse link
G Tbxt T-box transcription factor T involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15384171) Ensembl
MGI		 PMID:15384171 GO_REF:0000107 NCBI chrNW_004936489:16,027,359...16,035,041
Ensembl chrNW_004936489:16,027,359...16,035,041 		JBrowse link
neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9883720) Ensembl
MGI		 PMID:9883720 GO_REF:0000107 NCBI chrNW_004936487:17,690,206...17,819,619
Ensembl chrNW_004936487:17,690,968...17,819,669 		JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:9883720) MGI PMID:9883720 NCBI chrNW_004936481:9,823,790...9,847,291
Ensembl chrNW_004936481:9,824,392...9,847,104 		JBrowse link
G Adm adrenomedullin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16981008) Ensembl
MGI		 PMID:16981008 GO_REF:0000107 NCBI chrNW_004936528:8,005,223...8,007,586
Ensembl chrNW_004936528:8,005,189...8,007,643 		JBrowse link
G Alx1 ALX homeobox 1 acts_upstream_of_or_within ISO (PMID:8673125) MGI PMID:8673125 NCBI chrNW_004936507:2,775,752...2,797,065
Ensembl chrNW_004936507:2,775,752...2,797,062 		JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11504943), (PMID:9216040) Ensembl
MGI		 PMID:9216040 PMID:11504943 GO_REF:0000107 NCBI chrNW_004936492:14,818,561...14,902,231
Ensembl chrNW_004936492:14,816,623...14,902,132 		JBrowse link
G Arhgap35 Rho GTPase activating protein 35 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11044403) Ensembl
MGI		 PMID:11044403 GO_REF:0000107 NCBI chrNW_004936664:714,036...788,584
Ensembl chrNW_004936664:713,984...789,344 		JBrowse link
G Arid1a AT-rich interaction domain 1A acts_upstream_of_or_within ISO (PMID:23129809) MGI PMID:23129809 NCBI chrNW_004936474:11,148,857...11,197,312 JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16170314) Ensembl
MGI		 PMID:16170314 GO_REF:0000107 NCBI chrNW_004936471:31,962,500...32,019,516
Ensembl chrNW_004936471:31,962,336...32,020,712 		JBrowse link
G Bcl10 BCL10 immune signaling adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:434,740...442,162
Ensembl chrNW_004936608:434,978...442,391 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19850029) Ensembl
MGI		 PMID:19850029 GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468 		JBrowse link
G Brd2 bromodomain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19362612) Ensembl
MGI		 PMID:19362612 GO_REF:0000107 NCBI chrNW_004936476:25,807,179...25,818,914
Ensembl chrNW_004936476:25,807,163...25,818,899 		JBrowse link
G Cc2d2a coiled-coil and C2 domain containing 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24947469) Ensembl
MGI		 PMID:24947469 GO_REF:0000107 NCBI chrNW_004936477:12,315,829...12,415,915
Ensembl chrNW_004936477:12,315,799...12,408,603 		JBrowse link
G Cdk20 cyclin dependent kinase 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28817564) Ensembl
MGI		 PMID:28817564 GO_REF:0000107 NCBI chrNW_004936854:810,996...817,136
Ensembl chrNW_004936854:812,575...817,202 		JBrowse link
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17229766) Ensembl
MGI		 PMID:17229766 GO_REF:0000107 NCBI chrNW_004936629:3,453,384...3,570,250
Ensembl chrNW_004936629:3,455,887...3,568,566 		JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12149478) Ensembl
MGI		 PMID:12149478 GO_REF:0000107 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735 		JBrowse link
G Cluap1 clusterin associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23742838) Ensembl
MGI		 PMID:23742838 GO_REF:0000107 NCBI chrNW_004936694:779,399...810,534
Ensembl chrNW_004936694:780,197...810,457 		JBrowse link
G Cobl cordon-bleu WH2 repeat protein acts_upstream_of_or_within ISO (PMID:14512015) MGI PMID:14512015 NCBI chrNW_004936686:621,502...872,824 JBrowse link
G Deaf1 DEAF1 transcription factor involved_in ISO (MGI:3029622|PMID:14966286) UniProt PMID:14966286 MGI:3029622 NCBI chrNW_004936888:473,651...497,152
Ensembl chrNW_004936888:473,974...497,158 		JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein acts_upstream_of_or_within ISO (PMID:15710412) MGI PMID:15710412 NCBI chrNW_004936573:2,493,051...2,658,396
Ensembl chrNW_004936573:2,492,875...2,658,714 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12421720) Ensembl
MGI		 PMID:12421720 GO_REF:0000107 NCBI chrNW_004936595:520,299...528,361
Ensembl chrNW_004936595:520,548...528,371 		JBrowse link
G Enah ENAH actin regulator acts_upstream_of_or_within ISO (PMID:15371503)
(PMID:10069337)		 MGI PMID:10069337 PMID:15371503 NCBI chrNW_004936526:2,332,344...2,477,827
Ensembl chrNW_004936526:2,332,664...2,477,833 		JBrowse link
G Fuz fuzzy planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19877275) Ensembl
MGI		 PMID:19877275 GO_REF:0000107 NCBI chrNW_004936664:3,596,764...3,601,676
Ensembl chrNW_004936664:3,596,952...3,601,342 		JBrowse link
G Fzd3 frizzled class receptor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16495441) Ensembl
MGI		 PMID:16495441 GO_REF:0000107 NCBI chrNW_004936675:1,275,500...1,334,878
Ensembl chrNW_004936675:1,275,470...1,333,540 		JBrowse link
G Fzd6 frizzled class receptor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16495441) Ensembl
MGI		 PMID:16495441 GO_REF:0000107 NCBI chrNW_004936470:40,416,254...40,454,717
Ensembl chrNW_004936470:40,416,014...40,454,062 		JBrowse link
G Glmn glomulin, FKBP associated protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22405651) Ensembl
MGI		 PMID:22405651 GO_REF:0000107 NCBI chrNW_004936537:6,778,317...6,827,384
Ensembl chrNW_004936537:6,777,965...6,829,881 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21262862) Ensembl
MGI		 PMID:21262862 GO_REF:0000107 NCBI chrNW_004936470:41,856,683...41,961,666
Ensembl chrNW_004936470:41,859,035...42,002,844 		JBrowse link
G Grhl3 grainyhead like transcription factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:9,321,754...9,354,486
Ensembl chrNW_004936474:9,332,444...9,353,893 		JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:3714713|PMID:17442300)
(PMID:15755804), (PMID:9636176)		 UniProt
MGI		 PMID:9636176 PMID:15755804 PMID:17442300 MGI:3714713 NCBI chrNW_004936494:5,761,801...5,853,673
Ensembl chrNW_004936494:5,758,347...5,851,952 		JBrowse link
G Ift122 intraflagellar transport 122 involved_in ISO (MGI:3827087|PMID:19000668) UniProt PMID:19000668 MGI:3827087 NCBI chrNW_004936602:908,034...956,634
Ensembl chrNW_004936602:905,486...956,521 		JBrowse link
G Ift172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18930042) Ensembl
MGI		 PMID:18930042 GO_REF:0000107 NCBI chrNW_004936493:5,108,437...5,145,160
Ensembl chrNW_004936493:5,108,437...5,145,160 		JBrowse link
G Ift57 intraflagellar transport 57 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17027958) Ensembl
MGI		 PMID:17027958 GO_REF:0000107 NCBI chrNW_004936645:1,471,393...1,524,193
Ensembl chrNW_004936645:1,468,375...1,524,238 		JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17325035) Ensembl
MGI		 PMID:17325035 GO_REF:0000107 NCBI chrNW_004936490:16,952,698...16,960,424
Ensembl chrNW_004936490:16,952,363...16,960,489 		JBrowse link
G Kdm2a lysine demethylase 2A acts_upstream_of_or_within ISO (PMID:25463925) MGI PMID:25463925 NCBI chrNW_004936599:2,466,427...2,576,623
Ensembl chrNW_004936599:2,466,214...2,576,623 		JBrowse link
G Kdm6a lysine demethylase 6A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22949634) Ensembl
MGI		 PMID:22949634 GO_REF:0000107 NCBI chrNW_004936502:10,980,303...11,196,711
Ensembl chrNW_004936502:10,980,118...11,196,163 		JBrowse link
G Kif20b kinesin family member 20B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15755804) Ensembl
MGI		 PMID:15755804 GO_REF:0000107 NCBI chrNW_004936601:4,457,142...4,517,693
Ensembl chrNW_004936601:4,456,724...4,516,135 		JBrowse link
G Lhx2 LIM homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11719201) Ensembl
MGI		 PMID:11719201 GO_REF:0000107 NCBI chrNW_004936487:12,395,817...12,413,860
Ensembl chrNW_004936487:12,395,812...12,414,003 		JBrowse link
G Lias lipoic acid synthetase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15755804) Ensembl
MGI		 PMID:15755804 GO_REF:0000107 NCBI chrNW_004936482:7,068,326...7,085,571
Ensembl chrNW_004936482:7,068,445...7,084,504 		JBrowse link
G Lmo4 LIM domain only 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15691703)
(PMID:14966285)		 Ensembl
MGI		 PMID:14966285 PMID:15691703 GO_REF:0000107 NCBI chrNW_004936732:1,541,511...1,557,845
Ensembl chrNW_004936732:1,541,515...1,555,735 		JBrowse link
G LOC101956240 cat eye syndrome critical region protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20589882)
(PMID:21246654)
(PMID:15640247)		 Ensembl
MGI		 PMID:15640247 PMID:20589882 PMID:21246654 GO_REF:0000107 NCBI chrNW_004936807:498,491...542,503
Ensembl chrNW_004936807:498,789...542,008 		JBrowse link
G LOC101973767 vasodilator stimulated phosphoprotein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15371503) TreeGrafter
MGI		 PMID:15371503 GO_REF:0000118 NCBI chrNW_004936706:1,923,172...1,945,046
Ensembl chrNW_004936706:1,923,602...1,928,630 		JBrowse link
G Lrp2 LDL receptor related protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:10,245,001...10,438,933
Ensembl chrNW_004936469:10,244,881...10,438,935 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:19056682)
(PMID:15469977)
(PMID:10545599)
(PMID:19795512)
(PMID:19653321)		 MGI PMID:10545599 PMID:15469977 PMID:19056682 PMID:19653321 PMID:19795512 MGI:61254 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191 		JBrowse link
G Med12 mediator complex subunit 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20630950) Ensembl
MGI		 PMID:20630950 GO_REF:0000107 NCBI chrNW_004936762:460,342...483,264
Ensembl chrNW_004936762:460,342...483,195 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23454480)
(PMID:19776033)		 Ensembl
MGI		 PMID:19776033 PMID:23454480 GO_REF:0000107 NCBI chrNW_004936490:4,865,243...4,876,601
Ensembl chrNW_004936490:4,865,243...4,878,912 		JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:8,100,977...8,170,244
Ensembl chrNW_004936495:8,100,912...8,171,800 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:3,877,423...4,060,129
Ensembl chrNW_004936489:3,876,680...4,051,933 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase acts_upstream_of
involved_in		 ISO
IEA		 (PMID:25855017), (PMID:29222906) BHF-UCL
Ensembl		 PMID:25855017 PMID:29222906 GO_REF:0000107 NCBI chrNW_004936474:623,438...637,849
Ensembl chrNW_004936474:623,291...638,193 		JBrowse link
G Nckap1 NCK associated protein 1 acts_upstream_of_or_within ISO (PMID:16831833) MGI PMID:16831833 NCBI chrNW_004936509:11,525,764...11,624,833
Ensembl chrNW_004936509:11,524,556...11,624,621 		JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16712836) Ensembl
MGI		 PMID:16712836 GO_REF:0000107 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483 		JBrowse link
G Opa1 OPA1 mitochondrial dynamin like GTPase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15755804) Ensembl
MGI		 PMID:15755804 GO_REF:0000107 NCBI chrNW_004936711:1,027,531...1,113,796
Ensembl chrNW_004936711:1,032,935...1,106,847 		JBrowse link
G Pax2 paired box 2 involved_in ISO (MGI:84247|PMID:8951055) DFLAT PMID:8951055 MGI:84247 NCBI chrNW_004936600:4,850,594...4,939,010
Ensembl chrNW_004936600:4,850,552...4,928,214 		JBrowse link
G Pax3 paired box 3 acts_upstream_of_or_within ISO (PMID:15384171) MGI PMID:15384171 NCBI chrNW_004936569:4,215,513...4,307,815
Ensembl chrNW_004936569:4,216,900...4,307,815 		JBrowse link
G Pfn1 profilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10069337) Ensembl
MGI		 PMID:10069337 GO_REF:0000107 NCBI chrNW_004936677:2,762,971...2,766,038
Ensembl chrNW_004936677:2,762,971...2,766,149 		JBrowse link
G Phactr4 phosphatase and actin regulator 4 involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936474:12,517,800...12,613,170
Ensembl chrNW_004936474:12,517,765...12,614,968 		JBrowse link
G Plxnb2 plexin B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936629:521,981...539,475
Ensembl chrNW_004936629:525,649...538,743 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:1,165,159...1,270,138
Ensembl chrNW_004936512:1,163,615...1,270,255 		JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22007132) Ensembl
MGI		 PMID:22007132 GO_REF:0000107 NCBI chrNW_004936659:2,750,015...2,765,914
Ensembl chrNW_004936659:2,750,537...2,765,753 		JBrowse link
G Prkacb protein kinase cAMP-activated catalytic subunit beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22007132) Ensembl
MGI		 PMID:22007132 GO_REF:0000107 NCBI chrNW_004936608:1,353,905...1,464,636
Ensembl chrNW_004936608:1,353,897...1,464,636 		JBrowse link
G Ptch1 patched 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9262482) Ensembl
MGI		 PMID:9262482 GO_REF:0000107 NCBI chrNW_004936626:4,241,993...4,301,919
Ensembl chrNW_004936626:4,241,908...4,309,476 		JBrowse link
G Ptk7 protein tyrosine kinase 7 (inactive) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20704721)
(PMID:15229603)		 Ensembl
MGI		 PMID:15229603 PMID:20704721 GO_REF:0000107 NCBI chrNW_004936476:16,797,836...16,866,989
Ensembl chrNW_004936476:16,798,686...16,866,896 		JBrowse link
G Rab23 RAB23, member RAS oncogene family involved_in
acts_upstream_of_or_within		 ISO (MGI:69552|PMID:7720556)
(PMID:9636176)		 UniProt
MGI		 PMID:7720556 PMID:9636176 MGI:69552 NCBI chrNW_004936476:4,095,829...4,127,714
Ensembl chrNW_004936476:4,095,329...4,127,701 		JBrowse link
G Rala RAS like proto-oncogene A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:15,167,651...15,186,594
Ensembl chrNW_004936478:15,167,751...15,186,633 		JBrowse link
G Rara retinoic acid receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7607067) Ensembl
MGI		 PMID:7607067 GO_REF:0000107 NCBI chrNW_004936490:15,376,217...15,420,638
Ensembl chrNW_004936490:15,376,205...15,421,611 		JBrowse link
G Rarg retinoic acid receptor gamma involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7607067) Ensembl
MGI		 PMID:7607067 GO_REF:0000107 NCBI chrNW_004936512:10,502,954...10,524,796
Ensembl chrNW_004936512:10,500,622...10,524,824 		JBrowse link
G Rgma repulsive guidance molecule BMP co-receptor a involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14749425) Ensembl
MGI		 PMID:14749425 GO_REF:0000107 NCBI chrNW_004936483:9,753,112...9,792,817
Ensembl chrNW_004936483:9,766,275...9,793,001 		JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 acts_upstream_of_or_within ISO (PMID:17229766) MGI PMID:17229766 NCBI chrNW_004936532:7,142,580...7,284,722
Ensembl chrNW_004936532:7,145,882...7,286,244 		JBrowse link
G Rps7 ribosomal protein S7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15384171) Ensembl
MGI		 PMID:15384171 GO_REF:0000107 NCBI chrNW_004936532:1,734,993...1,740,202
Ensembl chrNW_004936532:1,734,983...1,742,151 		JBrowse link
G Sall1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (PMID:16790473) MGI PMID:16790473 NCBI chrNW_004936475:4,106,663...4,121,356
Ensembl chrNW_004936475:4,106,084...4,121,413 		JBrowse link
G Sall4 spalt like transcription factor 4 acts_upstream_of_or_within ISO (PMID:16790473) MGI PMID:16790473 NCBI chrNW_004936514:3,285,778...3,302,179
Ensembl chrNW_004936514:3,285,531...3,303,644 		JBrowse link
G Scrib scribble planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21515572)
(PMID:20643356)		 Ensembl
MGI		 PMID:20643356 PMID:21515572 GO_REF:0000107 NCBI chrNW_004936470:8,349,175...8,370,099
Ensembl chrNW_004936470:8,349,188...8,369,864 		JBrowse link
G Sdc4 syndecan 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23760952) Ensembl
MGI		 PMID:23760952 GO_REF:0000107 NCBI chrNW_004936514:7,528,538...7,562,391
Ensembl chrNW_004936514:7,555,685...7,562,391 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19966784)
(PMID:20215345)		 Ensembl
MGI		 PMID:19966784 PMID:20215345 GO_REF:0000107 NCBI chrNW_004936563:676,564...772,877
Ensembl chrNW_004936563:712,029...772,101 		JBrowse link
G Sema4c semaphorin 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936744:794,127...804,618
Ensembl chrNW_004936744:793,898...804,642 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20133625) Ensembl
MGI		 PMID:20133625 GO_REF:0000107 NCBI chrNW_004936596:795,940...898,823
Ensembl chrNW_004936596:796,601...883,373 		JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19850029) Ensembl
MGI		 PMID:19850029 GO_REF:0000107 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017 		JBrowse link
G Sfrp2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19850029) Ensembl
MGI		 PMID:19850029 GO_REF:0000107 NCBI chrNW_004936576:604,174...612,440
Ensembl chrNW_004936576:604,069...613,021 		JBrowse link
G Shroom3 shroom family member 3 acts_upstream_of_or_within ISO (PMID:16249236) MGI PMID:16249236 NCBI chrNW_004936676:533,654...703,549
Ensembl chrNW_004936676:409,926...703,839 		JBrowse link
G Ski SKI proto-oncogene acts_upstream_of_or_within ISO (PMID:9284043) MGI PMID:9284043 NCBI chrNW_004936737:1,223,653...1,274,664
Ensembl chrNW_004936737:1,222,341...1,276,631 		JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19592578) Ensembl
MGI		 PMID:19592578 GO_REF:0000107 NCBI chrNW_004936471:4,238,883...4,251,291
Ensembl chrNW_004936471:4,238,845...4,251,350 		JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19592578) Ensembl
MGI		 PMID:19592578 GO_REF:0000107 NCBI chrNW_004936801:1,041,946...1,069,617
Ensembl chrNW_004936801:1,041,708...1,069,776 		JBrowse link
G St14 ST14 transmembrane serine protease matriptase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19592578) Ensembl
MGI		 PMID:19592578 GO_REF:0000107 NCBI chrNW_004936572:2,137,820...2,182,674
Ensembl chrNW_004936572:2,137,332...2,182,742 		JBrowse link
G Stil STIL centriolar assembly protein acts_upstream_of_or_within ISO (PMID:10385121) MGI PMID:10385121 NCBI chrNW_004936474:28,079,114...28,131,214
Ensembl chrNW_004936474:28,079,492...28,131,198 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16155214) Ensembl
MGI		 PMID:16155214 GO_REF:0000107 NCBI chrNW_004936600:3,270,662...3,381,722
Ensembl chrNW_004936600:3,268,260...3,381,781 		JBrowse link
G Tbxt T-box transcription factor T involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16835439) Ensembl
MGI		 PMID:16835439 GO_REF:0000107 NCBI chrNW_004936489:16,027,359...16,035,041
Ensembl chrNW_004936489:16,027,359...16,035,041 		JBrowse link
G Tead2 TEA domain transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17868131) Ensembl
MGI		 PMID:17868131 GO_REF:0000107 NCBI chrNW_004936664:3,242,815...3,257,649
Ensembl chrNW_004936664:3,242,974...3,255,856 		JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO (PMID:8622766), (PMID:9811866) MGI PMID:8622766 PMID:9811866 NCBI chrNW_004936534:2,481,804...2,518,573
Ensembl chrNW_004936534:2,481,806...2,499,317 		JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272 		JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in ISO (MGI:894212|PMID:9217007) BHF-UCL PMID:9217007 MGI:894212 NCBI chrNW_004936628:310,720...394,002
Ensembl chrNW_004936628:308,691...394,007 		JBrowse link
G Tgif1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (PMID:17082251) MGI PMID:17082251 NCBI chrNW_004936672:1,128,104...1,135,844
Ensembl chrNW_004936672:1,128,108...1,136,292 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20178780) Ensembl
MGI		 PMID:20178780 GO_REF:0000107 NCBI chrNW_004936558:1,223,114...1,258,699
Ensembl chrNW_004936558:1,223,114...1,231,479 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936533:1,857,685...1,874,973
Ensembl chrNW_004936533:1,857,666...1,876,120 		JBrowse link
G Trim71 tripartite motif containing 71 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19098426) Ensembl
MGI		 PMID:19098426 GO_REF:0000107 NCBI chrNW_004936473:23,223,984...23,290,177
Ensembl chrNW_004936473:23,224,588...23,290,169 		JBrowse link
G Tsc1 TSC complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11438694) Ensembl
MGI		 PMID:11438694 GO_REF:0000107 NCBI chrNW_004936487:19,331,183...19,386,841
Ensembl chrNW_004936487:19,331,194...19,386,892 		JBrowse link
G Tsc2 TSC complex subunit 2 acts_upstream_of_or_within ISO (PMID:10096549) MGI PMID:10096549 NCBI chrNW_004936694:1,958,152...1,993,373
Ensembl chrNW_004936694:1,958,154...1,993,363 		JBrowse link
G Tulp3 TUB like protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19223390) Ensembl
MGI		 PMID:19223390 GO_REF:0000107 NCBI chrNW_004936606:3,209,170...3,278,809
Ensembl chrNW_004936606:3,209,141...3,278,563 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7729687) Ensembl
MGI		 PMID:7729687 GO_REF:0000107 NCBI chrNW_004936546:5,331,220...5,332,669
Ensembl chrNW_004936546:5,331,863...5,332,555 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:14512015)
(PMID:17229766)
(PMID:11709546), (PMID:12499390)
(PMID:17433286)
(PMID:15229603)
(PMID:19966784)
(PMID:23760952)
(PMID:21246654)		 MGI PMID:11709546 PMID:12499390 PMID:14512015 PMID:15229603 PMID:17229766 More... NCBI chrNW_004936740:228,377...242,318
Ensembl chrNW_004936740:228,317...242,601 		JBrowse link
G Wdr83 WD repeat domain 83 acts_upstream_of_or_within ISO (PMID:37509073) MGI PMID:37509073 NCBI chrNW_004936659:1,796,030...1,803,714
Ensembl chrNW_004936659:1,796,067...1,803,683 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19795512)
(PMID:17433286)		 Ensembl
MGI		 PMID:17433286 PMID:19795512 GO_REF:0000107 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:16598713) MGI PMID:16598713 NCBI chrNW_004936469:32,240,730...32,372,413
Ensembl chrNW_004936469:32,240,835...32,371,267 		JBrowse link
G Zic2 Zic family member 2 acts_upstream_of_or_within ISO (PMID:15384171) MGI PMID:15384171 NCBI chrNW_004936472:10,599,717...10,605,187
Ensembl chrNW_004936472:10,602,102...10,605,191 		JBrowse link
G Zic5 Zic family member 5 acts_upstream_of_or_within ISO (PMID:15136147) MGI PMID:15136147 NCBI chrNW_004936472:10,615,843...10,623,221
Ensembl chrNW_004936472:10,616,122...10,622,338 		JBrowse link
neural tube development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:19,175,997...19,263,335
Ensembl chrNW_004936471:19,175,992...19,263,335 		JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17589504) Ensembl
MGI		 PMID:17589504 GO_REF:0000107 NCBI chrNW_004936562:2,493,823...2,676,868
Ensembl chrNW_004936562:2,493,774...2,676,912 		JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19004860) Ensembl
MGI		 PMID:19004860 GO_REF:0000107 NCBI chrNW_004936498:3,099,419...3,242,334
Ensembl chrNW_004936498:3,099,396...3,242,335 		JBrowse link
G Dact1 dishevelled binding antagonist of beta catenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:3,017,029...3,026,759
Ensembl chrNW_004936495:3,017,150...3,025,684 		JBrowse link
G Dchs1 dachsous cadherin-related 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21303848) Ensembl
MGI		 PMID:21303848 GO_REF:0000107 NCBI chrNW_004936842:677,416...697,013
Ensembl chrNW_004936842:677,416...697,003 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936737:1,797,348...1,811,043
Ensembl chrNW_004936737:1,797,326...1,810,286 		JBrowse link
G Epha2 EPH receptor A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11287184) Ensembl
MGI		 PMID:11287184 GO_REF:0000107 NCBI chrNW_004936474:3,648,395...3,673,856
Ensembl chrNW_004936474:3,648,550...3,673,861 		JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18590716) Ensembl
MGI		 PMID:18590716 GO_REF:0000107 NCBI chrNW_004936596:2,728,089...2,735,718
Ensembl chrNW_004936596:2,728,114...2,735,317 		JBrowse link
G Gdf7 growth differentiation factor 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10693795) Ensembl
MGI		 PMID:10693795 GO_REF:0000107 NCBI chrNW_004936493:10,808,714...10,812,761
Ensembl chrNW_004936493:10,808,714...10,812,761 		JBrowse link
G Gli2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19056373) Ensembl
MGI		 PMID:19056373 GO_REF:0000107 NCBI chrNW_004936469:49,616,552...49,788,760
Ensembl chrNW_004936469:49,617,095...49,673,213 		JBrowse link
G Gli3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8387379) Ensembl
MGI		 PMID:8387379 GO_REF:0000107 NCBI chrNW_004936478:17,129,922...17,403,630
Ensembl chrNW_004936478:17,126,911...17,403,011 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21377456) Ensembl
MGI
TreeGrafter		 PMID:21377456 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936470:41,856,683...41,961,666
Ensembl chrNW_004936470:41,859,035...42,002,844 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11500373)
(PMID:10804175)		 Ensembl
MGI		 PMID:10804175 PMID:11500373 GO_REF:0000107 NCBI chrNW_004936711:640,002...642,580
Ensembl chrNW_004936711:639,905...642,622 		JBrowse link
G Hes3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO (PMID:11500373) MGI PMID:11500373 NCBI chrNW_004936623:1,096,519...1,098,175
Ensembl chrNW_004936623:1,096,870...1,097,858 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10804175) Ensembl
MGI		 PMID:10804175 GO_REF:0000107 NCBI chrNW_004936737:1,045,496...1,047,865
Ensembl chrNW_004936737:1,046,613...1,047,950 		JBrowse link
G Ift172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19521792) Ensembl
MGI		 PMID:19521792 GO_REF:0000107 NCBI chrNW_004936493:5,108,437...5,145,160
Ensembl chrNW_004936493:5,108,437...5,145,160 		JBrowse link
G Inka1 inka box actin regulator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20175189) Ensembl
MGI		 PMID:20175189 GO_REF:0000107 NCBI chrNW_004936529:1,410,244...1,412,023
Ensembl chrNW_004936529:1,410,201...1,412,023 		JBrowse link
G Intu inturned planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25774014) Ensembl
MGI		 PMID:25774014 GO_REF:0000107 NCBI chrNW_004936642:2,950,197...3,025,079
Ensembl chrNW_004936642:2,921,852...3,025,083 		JBrowse link
G Itpk1 inositol-tetrakisphosphate 1-kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19482943) Ensembl
MGI		 PMID:19482943 GO_REF:0000107 NCBI chrNW_004936733:930,986...1,064,223
Ensembl chrNW_004936733:930,972...1,064,229 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,767,526...3,775,416
Ensembl chrNW_004936599:3,766,242...3,776,128 		JBrowse link
G Kdm6a lysine demethylase 6A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23028370) Ensembl
MGI		 PMID:23028370 GO_REF:0000107 NCBI chrNW_004936502:10,980,303...11,196,711
Ensembl chrNW_004936502:10,980,118...11,196,163 		JBrowse link
G Kif3a kinesin family member 3A acts_upstream_of_or_within ISO (PMID:10330409) MGI PMID:10330409 NCBI chrNW_004936647:2,461,017...2,502,550
Ensembl chrNW_004936647:2,461,138...2,501,871 		JBrowse link
G LOC101956240 cat eye syndrome critical region protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22045912) Ensembl
MGI		 PMID:22045912 GO_REF:0000107 NCBI chrNW_004936807:498,491...542,503
Ensembl chrNW_004936807:498,789...542,008 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19795512) MGI PMID:19795512 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191 		JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate involved_in ISO (PMID:30655546) MGI PMID:30655546 NCBI chrNW_004936679:2,373,104...2,379,230 JBrowse link
G Med12 mediator complex subunit 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20589884) Ensembl
MGI		 PMID:20589884 GO_REF:0000107 NCBI chrNW_004936762:460,342...483,264
Ensembl chrNW_004936762:460,342...483,195 		JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10419687) Ensembl
MGI		 PMID:10419687 GO_REF:0000107 NCBI chrNW_004936538:3,394,623...3,596,025
Ensembl chrNW_004936538:3,398,222...3,595,261 		JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9585504) Ensembl
MGI		 PMID:9585504 GO_REF:0000107 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483 		JBrowse link
G Notch1 notch receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7789282) Ensembl
MGI		 PMID:7789282 GO_REF:0000107 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428 		JBrowse link
G Nup133 nucleoporin 133 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18539113) Ensembl
MGI		 PMID:18539113 GO_REF:0000107 NCBI chrNW_004936484:20,185,558...20,230,904
Ensembl chrNW_004936484:20,185,584...20,231,352 		JBrowse link
G Pax3 paired box 3 acts_upstream_of_or_within ISO (PMID:10419687) MGI PMID:10419687 NCBI chrNW_004936569:4,215,513...4,307,815
Ensembl chrNW_004936569:4,216,900...4,307,815 		JBrowse link
G Phgdh phosphoglycerate dehydrogenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19114063) Ensembl
MGI		 PMID:19114063 GO_REF:0000107 NCBI chrNW_004936627:4,414,122...4,448,347
Ensembl chrNW_004936627:4,414,122...4,448,623 		JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:1,923,383...1,958,160
Ensembl chrNW_004936694:1,930,621...1,957,179 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) UniProt PMID:11891195 NCBI chrNW_004936905:76,781...128,995 JBrowse link
G Plod3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16467571) Ensembl
MGI		 PMID:16467571 GO_REF:0000107 NCBI chrNW_004936543:1,090,268...1,097,170
Ensembl chrNW_004936543:1,090,253...1,097,301 		JBrowse link
G Plxna2 plexin A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:4,808,371...4,920,453
Ensembl chrNW_004936557:4,738,447...4,920,453 		JBrowse link
G Sall1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (PMID:18818376) MGI PMID:18818376 NCBI chrNW_004936475:4,106,663...4,121,356
Ensembl chrNW_004936475:4,106,084...4,121,413 		JBrowse link
G Sall2 spalt like transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18818376) Ensembl
MGI		 PMID:18818376 GO_REF:0000107 NCBI chrNW_004936880:670,063...685,532
Ensembl chrNW_004936880:668,789...685,594 		JBrowse link
G Sall4 spalt like transcription factor 4 acts_upstream_of_or_within ISO (PMID:18818376) MGI PMID:18818376 NCBI chrNW_004936514:3,285,778...3,302,179
Ensembl chrNW_004936514:3,285,531...3,303,644 		JBrowse link
G Sema3c semaphorin 3C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936810:903,306...1,063,024
Ensembl chrNW_004936810:903,304...1,063,024 		JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19850029) Ensembl
MGI		 PMID:19850029 GO_REF:0000107 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017 		JBrowse link
G Sfrp2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19850029) Ensembl
MGI		 PMID:19850029 GO_REF:0000107 NCBI chrNW_004936576:604,174...612,440
Ensembl chrNW_004936576:604,069...613,021 		JBrowse link
G Stil STIL centriolar assembly protein acts_upstream_of_or_within ISO (PMID:10385121) MGI PMID:10385121 NCBI chrNW_004936474:28,079,114...28,131,214
Ensembl chrNW_004936474:28,079,492...28,131,198 		JBrowse link
G Tbc1d32 TBC1 domain family member 32 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20159594) Ensembl
MGI		 PMID:20159594 GO_REF:0000107 NCBI chrNW_004936658:3,632,314...3,814,134
Ensembl chrNW_004936658:3,632,536...3,812,805 		JBrowse link
G Tcf7 transcription factor 7 acts_upstream_of_or_within ISO (PMID:15057272) MGI PMID:15057272 NCBI chrNW_004936647:1,096,726...1,125,753
Ensembl chrNW_004936647:1,097,019...1,125,729 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (PMID:15057272) MGI PMID:15057272 NCBI chrNW_004936486:3,473,877...3,660,565
Ensembl chrNW_004936486:3,473,843...3,660,576 		JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272 		JBrowse link
G Trim71 tripartite motif containing 71 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:23,223,984...23,290,177
Ensembl chrNW_004936473:23,224,588...23,290,169 		JBrowse link
G Ttbk2 tau tubulin kinase 2 acts_upstream_of_or_within ISO (PMID:23141541) MGI PMID:23141541 NCBI chrNW_004936471:6,003,294...6,108,677
Ensembl chrNW_004936471:6,009,091...6,154,529 		JBrowse link
G Tulp3 TUB like protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19286674) Ensembl
MGI		 PMID:19286674 GO_REF:0000107 NCBI chrNW_004936606:3,209,170...3,278,809
Ensembl chrNW_004936606:3,209,141...3,278,563 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19795512) Ensembl
MGI		 PMID:19795512 GO_REF:0000107 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15226444) Ensembl
MGI		 PMID:15226444 GO_REF:0000107 NCBI chrNW_004936495:12,045,679...12,050,737
Ensembl chrNW_004936495:12,045,377...12,051,536 		JBrowse link
neural tube formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brpf1 bromodomain and PHD finger containing 1 acts_upstream_of_or_within ISO (PMID:27528195) MGI PMID:27528195 NCBI chrNW_004936602:3,419,873...3,436,119
Ensembl chrNW_004936602:3,420,445...3,436,119 		JBrowse link
G Casp8 caspase 8 acts_upstream_of_or_within ISO (PMID:12404118) MGI PMID:12404118 NCBI chrNW_004936726:554,627...596,334
Ensembl chrNW_004936726:554,758...595,922 		JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11694877) Ensembl
MGI		 PMID:11694877 GO_REF:0000107 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735 		JBrowse link
G Coq7 coenzyme Q7, hydroxylase acts_upstream_of_or_within ISO (PMID:11716496) MGI PMID:11716496 NCBI chrNW_004936501:5,035,986...5,043,864
Ensembl chrNW_004936501:5,034,224...5,043,909 		JBrowse link
G Ift172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14603322) Ensembl
MGI		 PMID:14603322 GO_REF:0000107 NCBI chrNW_004936493:5,108,437...5,145,160
Ensembl chrNW_004936493:5,108,437...5,145,160 		JBrowse link
G Ift52 intraflagellar transport 52 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15930098) Ensembl
MGI		 PMID:15930098 GO_REF:0000107 NCBI chrNW_004936530:2,965,587...3,003,758
Ensembl chrNW_004936530:2,967,533...3,003,980 		JBrowse link
G Ipmk inositol polyphosphate multikinase acts_upstream_of_or_within ISO (PMID:15939867) MGI PMID:15939867 NCBI chrNW_004936614:4,724,935...4,772,373
Ensembl chrNW_004936614:4,725,250...4,772,153 		JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 acts_upstream_of_or_within ISO (PMID:16260493) MGI PMID:16260493 NCBI chrNW_004936510:1,772,971...1,836,075
Ensembl chrNW_004936510:1,772,971...1,837,765 		JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16000382) Ensembl
MGI		 PMID:16000382 GO_REF:0000107 NCBI chrNW_004936550:1,439,652...1,577,804
Ensembl chrNW_004936550:1,439,646...1,573,637 		JBrowse link
G Nup50 nucleoporin 50 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10891500) Ensembl
MGI		 PMID:10891500 GO_REF:0000107 NCBI chrNW_004936629:4,499,105...4,511,437
Ensembl chrNW_004936629:4,496,720...4,511,399 		JBrowse link
G Ptch1 patched 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:4,241,993...4,301,919
Ensembl chrNW_004936626:4,241,908...4,309,476 		JBrowse link
G Shh sonic hedgehog signaling molecule ISO RGD PMID:8124714 RGD:69996 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599 		JBrowse link
G Stk3 serine/threonine kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19786569) Ensembl
MGI		 PMID:19786569 GO_REF:0000107 NCBI chrNW_004936470:44,159,449...44,436,295
Ensembl chrNW_004936470:44,159,419...44,436,330 		JBrowse link
G Stk4 serine/threonine kinase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19786569) Ensembl
MGI		 PMID:19786569 GO_REF:0000107 NCBI chrNW_004936514:7,686,760...7,784,948
Ensembl chrNW_004936514:7,686,087...7,785,025 		JBrowse link
G Tctn1 tectonic family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16357211) Ensembl
MGI		 PMID:16357211 GO_REF:0000107 NCBI chrNW_004936558:3,552,909...3,581,212
Ensembl chrNW_004936558:3,552,864...3,581,368 		JBrowse link
G Tulp3 TUB like protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11406614) Ensembl
MGI		 PMID:11406614 GO_REF:0000107 NCBI chrNW_004936606:3,209,170...3,278,809
Ensembl chrNW_004936606:3,209,141...3,278,563 		JBrowse link
neural tube patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl13b ADP ribosylation factor like GTPase 13B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936666:115,964...179,639
Ensembl chrNW_004936666:116,264...177,989 		JBrowse link
G Dzip1l DAZ interacting zinc finger protein 1 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29487109) Ensembl
MGI		 PMID:29487109 GO_REF:0000107 NCBI chrNW_004936540:437,638...469,945
Ensembl chrNW_004936540:436,161...469,951 		JBrowse link
G Ift140 intraflagellar transport 140 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24009529) Ensembl
MGI		 PMID:24009529 GO_REF:0000107 NCBI chrNW_004936694:2,344,448...2,419,396
Ensembl chrNW_004936694:2,344,283...2,423,520 		JBrowse link
G Ptch1 patched 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:4,241,993...4,301,919
Ensembl chrNW_004936626:4,241,908...4,309,476 		JBrowse link
G Rpgrip1l RPGRIP1 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17553904) Ensembl
MGI		 PMID:17553904 GO_REF:0000107 NCBI chrNW_004936475:6,219,187...6,321,612
Ensembl chrNW_004936475:6,215,475...6,321,618 		JBrowse link
G Tbc1d32 TBC1 domain family member 32 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29487109) Ensembl
MGI		 PMID:29487109 GO_REF:0000107 NCBI chrNW_004936658:3,632,314...3,814,134
Ensembl chrNW_004936658:3,632,536...3,812,805 		JBrowse link
G Tmem107 transmembrane protein 107 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,404,017...1,406,756
Ensembl chrNW_004936595:1,403,442...1,406,783 		JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 acts_upstream_of_or_within ISO (PMID:21945076) MGI PMID:21945076 NCBI chrNW_004936525:115,614...174,641
Ensembl chrNW_004936525:115,479...174,694 		JBrowse link
pharyngeal arch artery morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrf4 adhesion G protein-coupled receptor F4 acts_upstream_of_or_within ISO (PMID:28806758) MGI PMID:28806758 NCBI chrNW_004936476:12,814,919...12,827,974
Ensembl chrNW_004936476:12,814,919...12,847,180 		JBrowse link
G Adgrf5 adhesion G protein-coupled receptor F5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28806758) Ensembl
MGI		 PMID:28806758 GO_REF:0000107 NCBI chrNW_004936476:13,414,087...13,503,926
Ensembl chrNW_004936476:13,414,058...13,504,509 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936804:52,435...115,289
Ensembl chrNW_004936804:48,947...115,412 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 NOT|involved_in ISO
IEA		 (MGI:3851675|PMID:19409885) BHF-UCL
Ensembl		 PMID:19409885 GO_REF:0000107 MGI:3851675 NCBI chrNW_004936726:1,543,263...1,711,422
Ensembl chrNW_004936726:1,543,245...1,704,541 		JBrowse link
G Edn1 endothelin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:885,489...892,292
Ensembl chrNW_004936534:885,287...891,772 		JBrowse link
G Ednra endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:1,950,117...2,005,786
Ensembl chrNW_004936535:1,949,941...2,005,910 		JBrowse link
G Folr1 folate receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:1,489,916...1,497,200
Ensembl chrNW_004936498:1,491,547...1,497,226 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936711:640,002...642,580
Ensembl chrNW_004936711:639,905...642,622 		JBrowse link
G Megf8 multiple EGF like domains 8 acts_upstream_of_or_within ISO (PMID:32203821) MGI PMID:32203821 NCBI chrNW_004936706:157,167...198,071
Ensembl chrNW_004936706:157,019...197,500 		JBrowse link
G Nog noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:6,262,651...6,264,069
Ensembl chrNW_004936490:6,262,785...6,263,483 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (PMID:23319608) MGI PMID:23319608 NCBI chrNW_004936659:1,152,846...1,246,718
Ensembl chrNW_004936659:1,169,792...1,249,213 		JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in ISO (MGI:3609313|PMID:11390347) BHF-UCL PMID:11390347 MGI:3609313 NCBI chrNW_004936628:310,720...394,002
Ensembl chrNW_004936628:308,691...394,007 		JBrowse link
pharyngeal system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17078885) Ensembl
MGI		 PMID:17078885 GO_REF:0000107 NCBI chrNW_004936469:20,743,195...20,811,567
Ensembl chrNW_004936469:20,743,213...20,811,569 		JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:5,350,870...5,464,561
Ensembl chrNW_004936476:5,350,870...5,464,354 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:71,965...143,940
Ensembl chrNW_004936530:71,920...143,940 		JBrowse link
G Ece1 endothelin converting enzyme 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12950083) Ensembl
MGI		 PMID:12950083 GO_REF:0000107 NCBI chrNW_004936474:7,034,134...7,083,005
Ensembl chrNW_004936474:7,034,134...7,083,005 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21364285) Ensembl
MGI		 PMID:21364285 GO_REF:0000107 NCBI chrNW_004936648:395,526...546,705
Ensembl chrNW_004936648:395,524...546,729 		JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21364285) Ensembl
MGI		 PMID:21364285 GO_REF:0000107 NCBI chrNW_004936600:4,004,847...4,010,626
Ensembl chrNW_004936600:4,004,824...4,010,689 		JBrowse link
G Foxi3 forkhead box I3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:517,566...522,709
Ensembl chrNW_004936712:517,562...522,925 		JBrowse link
G Gata3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:6,780,692...6,800,883
Ensembl chrNW_004936484:6,780,692...6,800,966 		JBrowse link
G Hoxa2 homeobox A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:3,729,079...3,731,353
Ensembl chrNW_004936478:3,729,107...3,730,870 		JBrowse link
G Isl1 ISL LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:15,805,259...15,817,854
Ensembl chrNW_004936480:15,805,247...15,817,854 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11390666) Ensembl
MGI		 PMID:11390666 GO_REF:0000107 NCBI chrNW_004936609:2,406,004...2,408,980
Ensembl chrNW_004936609:2,406,004...2,409,046 		JBrowse link
G Nkx2-6 NK2 homeobox 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11390666) Ensembl
MGI		 PMID:11390666 GO_REF:0000107 NCBI chrNW_004936555:7,111,678...7,114,944
Ensembl chrNW_004936555:7,111,678...7,114,944 		JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in ISO (MGI:1267297|PMID:9621431) BHF-UCL PMID:9621431 MGI:1267297 NCBI chrNW_004936555:7,087,677...7,091,334
Ensembl chrNW_004936555:7,088,577...7,091,334 		JBrowse link
G Plxna2 plexin A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:4,808,371...4,920,453
Ensembl chrNW_004936557:4,738,447...4,920,453 		JBrowse link
G Ptch1 patched 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:4,241,993...4,301,919
Ensembl chrNW_004936626:4,241,908...4,309,476 		JBrowse link
G Six1 SIX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21364285) Ensembl
MGI		 PMID:21364285 GO_REF:0000107 NCBI chrNW_004936495:4,839,496...4,842,906
Ensembl chrNW_004936495:4,838,051...4,842,994 		JBrowse link
G Six4 SIX homeobox 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:4,887,718...4,900,198
Ensembl chrNW_004936495:4,887,718...4,900,198 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:14585638)
(PMID:21364285)
(PMID:16141220)
(MGI:4879036|PMID:21177346)		 UniProt
MGI		 PMID:14585638 PMID:16141220 PMID:21177346 PMID:21364285 MGI:4879036 NCBI chrNW_004936619:3,662,567...3,670,470
Ensembl chrNW_004936619:3,664,468...3,670,525 		JBrowse link
G Tbx2 T-box transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:2,769,264...2,778,342
Ensembl chrNW_004936490:2,769,231...2,805,238 		JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17078885) Ensembl
MGI		 PMID:17078885 GO_REF:0000107 NCBI chrNW_004936524:7,656,523...7,680,043
Ensembl chrNW_004936524:7,655,847...7,681,097 		JBrowse link
planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20704721) Ensembl
MGI		 PMID:20704721 GO_REF:0000107 NCBI chrNW_004936629:3,453,384...3,570,250
Ensembl chrNW_004936629:3,455,887...3,568,566 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16571627) Ensembl
MGI
TreeGrafter		 PMID:16571627 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936737:1,797,348...1,811,043
Ensembl chrNW_004936737:1,797,326...1,810,286 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16571627) Ensembl
MGI
TreeGrafter		 PMID:16571627 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936595:520,299...528,361
Ensembl chrNW_004936595:520,548...528,371 		JBrowse link
G Dvl3 dishevelled segment polarity protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19008950) TreeGrafter
MGI		 PMID:19008950 GO_REF:0000118 NCBI chrNW_004936578:5,693,433...5,710,137
Ensembl chrNW_004936578:5,693,342...5,710,143 		JBrowse link
G Fzd1 frizzled class receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20940229) Ensembl
MGI		 PMID:20940229 GO_REF:0000107 NCBI chrNW_004936621:2,899,183...2,903,427
Ensembl chrNW_004936621:2,900,995...2,902,947 		JBrowse link
G Fzd2 frizzled class receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20940229) Ensembl
MGI		 PMID:20940229 GO_REF:0000107 NCBI chrNW_004936541:965,135...967,018
Ensembl chrNW_004936541:965,131...966,798 		JBrowse link
G Grhl3 grainyhead like transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20643356) Ensembl
MGI		 PMID:20643356 GO_REF:0000107 NCBI chrNW_004936474:9,321,754...9,354,486
Ensembl chrNW_004936474:9,332,444...9,353,893 		JBrowse link
G Ptk7 protein tyrosine kinase 7 (inactive) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20704721) Ensembl
MGI		 PMID:20704721 GO_REF:0000107 NCBI chrNW_004936476:16,797,836...16,866,989
Ensembl chrNW_004936476:16,798,686...16,866,896 		JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18257070) Ensembl
MGI		 PMID:18257070 GO_REF:0000107 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017 		JBrowse link
G Sfrp2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18257070) Ensembl
MGI		 PMID:18257070 GO_REF:0000107 NCBI chrNW_004936576:604,174...612,440
Ensembl chrNW_004936576:604,069...613,021 		JBrowse link
G Sfrp5 secreted frizzled related protein 5 acts_upstream_of_or_within ISO (PMID:18257070) MGI PMID:18257070 NCBI chrNW_004936636:1,968,410...1,973,885
Ensembl chrNW_004936636:1,968,330...1,973,916 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:18257070)
(PMID:20643356)
(PMID:20940229)
(PMID:19008950)
(PMID:20704721)
(PMID:16571627)		 MGI PMID:16571627 PMID:18257070 PMID:19008950 PMID:20643356 PMID:20704721 More... NCBI chrNW_004936740:228,377...242,318
Ensembl chrNW_004936740:228,317...242,601 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19056682) Ensembl
MGI		 PMID:19056682 GO_REF:0000107 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159 		JBrowse link
positive regulation of trophectodermal cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csf2 colony stimulating factor 2 involved_in ISO (PMID:16792532), (PMID:24520418) AgBase PMID:16792532 PMID:24520418 NCBI chrNW_004936647:3,081,896...3,083,864
Ensembl chrNW_004936647:3,081,896...3,083,864 		JBrowse link
G Grn granulin precursor acts_upstream_of_or_within ISO (PMID:15901638) MGI PMID:15901638 NCBI chrNW_004936541:793,548...800,271
Ensembl chrNW_004936541:793,523...800,217 		JBrowse link
G Igf1 insulin like growth factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:11,709,623...11,784,028
Ensembl chrNW_004936492:11,709,222...11,778,351 		JBrowse link
regulation of blastocyst development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klf4 KLF transcription factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29593216) Ensembl
MGI		 PMID:29593216 GO_REF:0000107 NCBI chrNW_004936559:5,105,456...5,109,970
Ensembl chrNW_004936559:5,105,463...5,109,970 		JBrowse link
G LOC101957772 BEN domain-containing protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:29,600,130...29,647,142
Ensembl chrNW_004936474:29,599,327...29,647,228 		JBrowse link
G Ttll1 TTL family tubulin polyglutamylase complex subunit L1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29593216) Ensembl
MGI		 PMID:29593216 GO_REF:0000107 NCBI chrNW_004936718:869,901...884,708
Ensembl chrNW_004936718:869,876...884,684 		JBrowse link
G Ttll4 tubulin tyrosine ligase like 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29593216) Ensembl
MGI		 PMID:29593216 GO_REF:0000107 NCBI chrNW_004936569:1,153,376...1,201,704
Ensembl chrNW_004936569:1,153,447...1,194,269 		JBrowse link
regulation of cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcm1 glial cells missing transcription factor 1 involved_in ISO (PMID:19219068) UniProt PMID:19219068 NCBI chrNW_004936476:7,724,666...7,738,401 JBrowse link
G Stk3 serine/threonine kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24595170) Ensembl
MGI		 PMID:24595170 GO_REF:0000107 NCBI chrNW_004936470:44,159,449...44,436,295
Ensembl chrNW_004936470:44,159,419...44,436,330 		JBrowse link
G Stk4 serine/threonine kinase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24595170) Ensembl
MGI		 PMID:24595170 GO_REF:0000107 NCBI chrNW_004936514:7,686,760...7,784,948
Ensembl chrNW_004936514:7,686,087...7,785,025 		JBrowse link
regulation of cell migration involved in somitogenic axis elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp2r3a protein phosphatase 2 regulatory subunit B''alpha involved_in ISO (PMID:15687260) BHF-UCL PMID:15687260 NCBI chrNW_004936529:8,885,803...9,034,217
Ensembl chrNW_004936529:8,920,243...9,033,865 		JBrowse link
regulation of establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sec24b SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19966784) Ensembl
MGI		 PMID:19966784 GO_REF:0000107 NCBI chrNW_004936563:676,564...772,877
Ensembl chrNW_004936563:712,029...772,101 		JBrowse link
regulation of neural crest cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A NOT|involved_in ISO (MGI:3040576|PMID:15073157) BHF-UCL PMID:15073157 MGI:3040576 NCBI chrNW_004936804:52,435...115,289
Ensembl chrNW_004936804:48,947...115,412 		JBrowse link
regulation of somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdx1 caudal type homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:4,736,621...4,752,354
Ensembl chrNW_004936504:4,736,666...4,752,260 		JBrowse link
G Cdx2 caudal type homeobox 2 involved_in ISO (MGI:5301472|PMID:22015720) UniProt PMID:22015720 MGI:5301472 NCBI chrNW_004936472:23,137,936...23,141,205 JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937098:212,704...220,589
Ensembl chrNW_004937098:213,227...220,427 		JBrowse link
G Dmrt2 doublesex and mab-3 related transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17974128) Ensembl
MGI		 PMID:17974128 GO_REF:0000107 NCBI chrNW_004936503:3,857,165...3,864,130
Ensembl chrNW_004936503:3,857,165...3,864,147 		JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19779553) Ensembl
MGI		 PMID:19779553 GO_REF:0000107 NCBI chrNW_004936823:283,207...290,970
Ensembl chrNW_004936823:283,205...290,986 		JBrowse link
G Notch1 notch receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7789282) Ensembl
MGI		 PMID:7789282 GO_REF:0000107 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428 		JBrowse link
G Pax3 paired box 3 acts_upstream_of_or_within ISO (PMID:17974128) MGI PMID:17974128 NCBI chrNW_004936569:4,215,513...4,307,815
Ensembl chrNW_004936569:4,216,900...4,307,815 		JBrowse link
regulation of spongiotrophoblast cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrk Nik related kinase acts_upstream_of_or_within ISO (PMID:21715335) MGI PMID:21715335 NCBI chrNW_004936499:8,629,563...8,747,858 JBrowse link
retinoic acid receptor signaling pathway involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15889094) Ensembl
MGI		 PMID:15889094 GO_REF:0000107 NCBI chrNW_004936471:19,175,997...19,263,335
Ensembl chrNW_004936471:19,175,992...19,263,335 		JBrowse link
roof plate formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdf7 growth differentiation factor 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10693795) Ensembl
MGI		 PMID:10693795 GO_REF:0000107 NCBI chrNW_004936493:10,808,714...10,812,761
Ensembl chrNW_004936493:10,808,714...10,812,761 		JBrowse link
rostrocaudal neural tube patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap2 ATPase H+ transporting accessory protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936502:7,206,226...7,232,798
Ensembl chrNW_004936502:7,206,172...7,233,912 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8887324) Ensembl
MGI		 PMID:8887324 GO_REF:0000107 NCBI chrNW_004936520:5,707,542...5,716,966
Ensembl chrNW_004936520:5,707,778...5,717,024 		JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19913509) Ensembl
MGI		 PMID:19913509 GO_REF:0000107 NCBI chrNW_004936496:1,248,582...1,251,406
Ensembl chrNW_004936496:1,248,577...1,251,430 		JBrowse link
smoothened signaling pathway involved in dorsal/ventral neural tube patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20159594)
(PMID:17395647)		 Ensembl
MGI		 PMID:17395647 PMID:20159594 GO_REF:0000107 NCBI chrNW_004936469:49,616,552...49,788,760
Ensembl chrNW_004936469:49,617,095...49,673,213 		JBrowse link
G Gli3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17395647)
(PMID:20159594)		 Ensembl
MGI		 PMID:17395647 PMID:20159594 GO_REF:0000107 NCBI chrNW_004936478:17,129,922...17,403,630
Ensembl chrNW_004936478:17,126,911...17,403,011 		JBrowse link
G Ift122 intraflagellar transport 122 acts_upstream_of_or_within ISO (PMID:22689656) MGI PMID:22689656 NCBI chrNW_004936602:908,034...956,634
Ensembl chrNW_004936602:905,486...956,521 		JBrowse link
G Tbc1d32 TBC1 domain family member 32 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20159594) Ensembl
MGI		 PMID:20159594 GO_REF:0000107 NCBI chrNW_004936658:3,632,314...3,814,134
Ensembl chrNW_004936658:3,632,536...3,812,805 		JBrowse link
G Tulp3 TUB like protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19223390) Ensembl
MGI		 PMID:19223390 GO_REF:0000107 NCBI chrNW_004936606:3,209,170...3,278,809
Ensembl chrNW_004936606:3,209,141...3,278,563 		JBrowse link
G Wdr19 WD repeat domain 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22689656) Ensembl
MGI		 PMID:22689656 GO_REF:0000107 NCBI chrNW_004936482:6,863,592...6,937,810
Ensembl chrNW_004936482:6,863,571...6,937,979 		JBrowse link
somite rostral/caudal axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18794329) Ensembl
MGI		 PMID:18794329 GO_REF:0000107 NCBI chrNW_004936469:50,329,564...50,443,532
Ensembl chrNW_004936469:50,329,409...50,443,626 		JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:11291865) MGI PMID:11291865 NCBI chrNW_004936620:2,966,341...2,969,349
Ensembl chrNW_004936620:2,966,341...2,969,349 		JBrowse link
G Gdf3 growth differentiation factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16368929) Ensembl
MGI		 PMID:16368929 GO_REF:0000107 NCBI chrNW_004937847:8,179...16,783
Ensembl chrNW_004937847:7,456...16,783 		JBrowse link
G Kdm6a lysine demethylase 6A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22949634) Ensembl
MGI		 PMID:22949634 GO_REF:0000107 NCBI chrNW_004936502:10,980,303...11,196,711
Ensembl chrNW_004936502:10,980,118...11,196,163 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11291865) Ensembl
MGI		 PMID:11291865 GO_REF:0000107 NCBI chrNW_004936490:1,324,378...1,332,177
Ensembl chrNW_004936490:1,324,370...1,331,505 		JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936483:15,533,264...15,534,576
Ensembl chrNW_004936483:15,533,522...15,534,576 		JBrowse link
G Mesp2 mesoderm posterior bHLH transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20346937) TreeGrafter
MGI		 PMID:20346937 GO_REF:0000118 NCBI chrNW_004936483:15,555,084...15,557,060
Ensembl chrNW_004936483:15,555,084...15,557,060 		JBrowse link
G Nrarp NOTCH regulated ankyrin repeat protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21998026) Ensembl
MGI		 PMID:21998026 GO_REF:0000107 NCBI chrNW_004936669:702,825...705,009
Ensembl chrNW_004936669:702,853...703,197 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (PMID:11291865) MGI PMID:11291865 NCBI chrNW_004936495:1,433,124...1,449,409
Ensembl chrNW_004936495:1,432,598...1,442,918 		JBrowse link
G Ripply1 ripply transcriptional repressor 1 acts_upstream_of_or_within ISO (PMID:20346937) MGI PMID:20346937 NCBI chrNW_004936499:7,845,180...7,848,954
Ensembl chrNW_004936499:7,846,041...7,848,400 		JBrowse link
G Ripply2 ripply transcriptional repressor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20346937) Ensembl
MGI		 PMID:20346937 GO_REF:0000107 NCBI chrNW_004936510:7,101,148...7,106,184
Ensembl chrNW_004936510:7,101,148...7,105,185 		JBrowse link
G Smad4 SMAD family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9420335) Ensembl
MGI		 PMID:9420335 GO_REF:0000107 NCBI chrNW_004936497:12,242,869...12,278,012
Ensembl chrNW_004936497:12,249,140...12,278,123 		JBrowse link
G Tbx6 T-box transcription factor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20346937) Ensembl
MGI		 PMID:20346937 GO_REF:0000107 NCBI chrNW_004936501:12,402,709...12,407,571
Ensembl chrNW_004936501:12,402,724...12,407,571 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20178780) Ensembl
MGI		 PMID:20178780 GO_REF:0000107 NCBI chrNW_004936558:1,223,114...1,258,699
Ensembl chrNW_004936558:1,223,114...1,231,479 		JBrowse link
somite specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cobl cordon-bleu WH2 repeat protein involved_in ISO (MGI:76306|PMID:7586755) BHF-UCL PMID:7586755 MGI:76306 NCBI chrNW_004936686:621,502...872,824 JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14960495) Ensembl
MGI		 PMID:14960495 GO_REF:0000107 NCBI chrNW_004937098:212,704...220,589
Ensembl chrNW_004937098:213,227...220,427 		JBrowse link
G Meox1 mesenchyme homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12925591) Ensembl
MGI		 PMID:12925591 GO_REF:0000107 NCBI chrNW_004936541:216,390...238,153
Ensembl chrNW_004936541:217,193...236,031 		JBrowse link
G Meox2 mesenchyme homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12925591) Ensembl
MGI		 PMID:12925591 GO_REF:0000107 NCBI chrNW_004936546:2,239,442...2,304,099
Ensembl chrNW_004936546:2,239,442...2,304,099 		JBrowse link
somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi1 abl interactor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15755804) Ensembl
MGI		 PMID:15755804 GO_REF:0000107 NCBI chrNW_004936484:2,090,605...2,194,109
Ensembl chrNW_004936484:2,088,927...2,194,109 		JBrowse link
G Atm ATM serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16687486) Ensembl
MGI		 PMID:16687486 GO_REF:0000107 NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211 		JBrowse link
G Axin2 axin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12636920) Ensembl
MGI		 PMID:12636920 GO_REF:0000107 NCBI chrNW_004936541:7,155,963...7,242,466
Ensembl chrNW_004936541:7,211,985...7,242,470 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16943278) Ensembl
MGI		 PMID:16943278 GO_REF:0000107 NCBI chrNW_004936804:52,435...115,289
Ensembl chrNW_004936804:48,947...115,412 		JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in IEA
ISS		 Ensembl
CAFA		 GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936487:11,793,078...11,813,803
Ensembl chrNW_004936487:11,793,005...11,812,934 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15902259) Ensembl
MGI		 PMID:15902259 GO_REF:0000107 NCBI chrNW_004937098:212,704...220,589
Ensembl chrNW_004937098:213,227...220,427 		JBrowse link
G Dll3 delta like canonical Notch ligand 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9272948)
(PMID:15170697)		 Ensembl
MGI		 PMID:9272948 PMID:15170697 GO_REF:0000107 NCBI chrNW_004936661:2,322,531...2,330,150
Ensembl chrNW_004936661:2,322,531...2,329,953 		JBrowse link
G Ep300 E1A binding protein p300 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15937931) Ensembl
MGI		 PMID:15937931 GO_REF:0000107 NCBI chrNW_004936492:696,982...778,132
Ensembl chrNW_004936492:696,960...778,138 		JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18794329) Ensembl
MGI		 PMID:18794329 GO_REF:0000107 NCBI chrNW_004936469:50,329,564...50,443,532
Ensembl chrNW_004936469:50,329,409...50,443,626 		JBrowse link
G Foxb1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:20,934,524...20,935,584
Ensembl chrNW_004936471:20,934,580...20,935,557 		JBrowse link
G Foxc2 forkhead box C2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:2,236,224...2,238,501
Ensembl chrNW_004936641:2,236,873...2,238,375 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO (PMID:11124112) MGI PMID:11124112 NCBI chrNW_004943883:4...1,756 JBrowse link
G Hes7 hes family bHLH transcription factor 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11641270), (PMID:19779553)
(PMID:15170214)		 Ensembl
MGI		 PMID:11641270 PMID:15170214 PMID:19779553 GO_REF:0000107 NCBI chrNW_004936595:1,352,621...1,355,177
Ensembl chrNW_004936595:1,352,621...1,356,113 		JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17325035)
(PMID:15937931)		 Ensembl
MGI		 PMID:15937931 PMID:17325035 GO_REF:0000107 NCBI chrNW_004936490:16,952,698...16,960,424
Ensembl chrNW_004936490:16,952,363...16,960,489 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15545629)
(PMID:10090727)		 Ensembl
MGI		 PMID:10090727 PMID:15545629 GO_REF:0000107 NCBI chrNW_004936818:453,635...569,194
Ensembl chrNW_004936818:453,635...567,469 		JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18234727) Ensembl
MGI		 PMID:18234727 GO_REF:0000107 NCBI chrNW_004936823:283,207...290,970
Ensembl chrNW_004936823:283,205...290,986 		JBrowse link
G LOC101972150 protocadherin-8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12591245) Ensembl
MGI		 PMID:12591245 GO_REF:0000107 NCBI chrNW_004936667:716,802...721,441
Ensembl chrNW_004936667:716,625...721,503 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19795512) MGI PMID:19795512 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191 		JBrowse link
G Med12 mediator complex subunit 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20589884) Ensembl
MGI		 PMID:20589884 GO_REF:0000107 NCBI chrNW_004936762:460,342...483,264
Ensembl chrNW_004936762:460,342...483,195 		JBrowse link
G Mesp2 mesoderm posterior bHLH transcription factor 2 acts_upstream_of_or_within ISO (PMID:15902259) MGI PMID:15902259 NCBI chrNW_004936483:15,555,084...15,557,060
Ensembl chrNW_004936483:15,555,084...15,557,060 		JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16000382) Ensembl
MGI		 PMID:16000382 GO_REF:0000107 NCBI chrNW_004936550:1,439,652...1,577,804
Ensembl chrNW_004936550:1,439,646...1,573,637 		JBrowse link
G Msgn1 mesogenin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11124811), (PMID:21750544) Ensembl
MGI		 PMID:11124811 PMID:21750544 GO_REF:0000107 NCBI chrNW_004936493:13,129,883...13,130,464
Ensembl chrNW_004936493:13,129,883...13,130,464 		JBrowse link
G Myf5 myogenic factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10929709)
(PMID:8565825)
(PMID:19531352)		 Ensembl
MGI		 PMID:8565825 PMID:10929709 PMID:19531352 GO_REF:0000107 NCBI chrNW_004936698:1,609,227...1,611,283
Ensembl chrNW_004936698:1,609,227...1,611,283 		JBrowse link
G Myf6 myogenic factor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7588068) Ensembl
MGI		 PMID:7588068 GO_REF:0000107 NCBI chrNW_004936698:1,599,149...1,600,989
Ensembl chrNW_004936698:1,599,101...1,601,078 		JBrowse link
G Nckap1 NCK associated protein 1 acts_upstream_of_or_within ISO (PMID:16831833) MGI PMID:16831833 NCBI chrNW_004936509:11,525,764...11,624,833
Ensembl chrNW_004936509:11,524,556...11,624,621 		JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in ISO (MGI:1267297|PMID:9621431) BHF-UCL PMID:9621431 MGI:1267297 NCBI chrNW_004936555:7,087,677...7,091,334
Ensembl chrNW_004936555:7,088,577...7,091,334 		JBrowse link
G Nle1 notchless homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24875805) Ensembl
MGI		 PMID:24875805 GO_REF:0000107 NCBI chrNW_004936538:101,245...109,796
Ensembl chrNW_004936538:101,047...109,873 		JBrowse link
G Palb2 partner and localizer of BRCA2 acts_upstream_of_or_within ISO (PMID:20484223) MGI PMID:20484223 NCBI chrNW_004936501:8,246,927...8,273,258 JBrowse link
G Pax1 paired box 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16093716) Ensembl
MGI		 PMID:16093716 GO_REF:0000107 NCBI chrNW_004936620:3,765,481...3,773,779
Ensembl chrNW_004936620:3,765,444...3,776,467 		JBrowse link
G Plxna2 plexin A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:4,808,371...4,920,453
Ensembl chrNW_004936557:4,738,447...4,920,453 		JBrowse link
G Pofut1 protein O-fucosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12697902) Ensembl
MGI		 PMID:12697902 GO_REF:0000107 NCBI chrNW_004936485:19,111,704...19,137,689
Ensembl chrNW_004936485:19,111,675...19,137,611 		JBrowse link
G Poglut1 protein O-glucosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9636176) Ensembl
MGI		 PMID:9636176 GO_REF:0000107 NCBI chrNW_004936536:6,408,066...6,427,864
Ensembl chrNW_004936536:6,408,060...6,429,589 		JBrowse link
G Ppp2r3a protein phosphatase 2 regulatory subunit B''alpha involved_in ISO (PMID:15687260) BHF-UCL PMID:15687260 NCBI chrNW_004936529:8,885,803...9,034,217
Ensembl chrNW_004936529:8,920,243...9,033,865 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16687486) Ensembl
MGI		 PMID:16687486 GO_REF:0000107 NCBI chrNW_004936590:4,722,914...4,887,615
Ensembl chrNW_004936590:4,722,873...4,890,156 		JBrowse link
G Psen1 presenilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10557208), (PMID:19779553)
(PMID:9153393)		 Ensembl
MGI		 PMID:9153393 PMID:10557208 PMID:19779553 GO_REF:0000107 NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065 		JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO (PMID:10557208), (PMID:19779553) MGI PMID:10557208 PMID:19779553 NCBI chrNW_004936526:3,584,194...3,611,719
Ensembl chrNW_004936526:3,584,188...3,614,074 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19779553) Ensembl
MGI		 PMID:19779553 GO_REF:0000107 NCBI chrNW_004936477:3,354,336...3,445,248
Ensembl chrNW_004936477:3,349,627...3,461,797 		JBrowse link
G Ripply2 ripply transcriptional repressor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17531978) Ensembl
MGI		 PMID:17531978 GO_REF:0000107 NCBI chrNW_004936510:7,101,148...7,106,184
Ensembl chrNW_004936510:7,101,148...7,105,185 		JBrowse link
G Ror2 receptor tyrosine kinase like orphan receptor 2 acts_upstream_of_or_within ISO (PMID:14745966) MGI PMID:14745966 NCBI chrNW_004936796:630,307...675,157
Ensembl chrNW_004936796:630,756...674,279 		JBrowse link
G Sema3c semaphorin 3C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936810:903,306...1,063,024
Ensembl chrNW_004936810:903,304...1,063,024 		JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16467359) Ensembl
MGI		 PMID:16467359 GO_REF:0000107 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017 		JBrowse link
G Sfrp2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16467359) Ensembl
MGI		 PMID:16467359 GO_REF:0000107 NCBI chrNW_004936576:604,174...612,440
Ensembl chrNW_004936576:604,069...613,021 		JBrowse link
G Smad3 SMAD family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15183723) Ensembl
MGI		 PMID:15183723 GO_REF:0000107 NCBI chrNW_004936471:27,080,662...27,185,861
Ensembl chrNW_004936471:27,080,575...27,189,793 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:667,960...669,367
Ensembl chrNW_004936842:667,936...669,441 		JBrowse link
G Tbx18 T-box transcription factor 18 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15155583) TreeGrafter
MGI		 PMID:15155583 GO_REF:0000118 NCBI chrNW_004936510:6,366,450...6,396,056
Ensembl chrNW_004936510:6,366,846...6,393,882 		JBrowse link
G Tbxt T-box transcription factor T involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15384171)
(PMID:16835439)
(PMID:8293872)		 Ensembl
MGI
TreeGrafter		 PMID:8293872 PMID:15384171 PMID:16835439 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936489:16,027,359...16,035,041
Ensembl chrNW_004936489:16,027,359...16,035,041 		JBrowse link
G Tcap titin-cap involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:14,856,433...14,857,692
Ensembl chrNW_004936490:14,856,433...14,857,722 		JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20178780) Ensembl
MGI		 PMID:20178780 GO_REF:0000107 NCBI chrNW_004936558:1,223,114...1,258,699
Ensembl chrNW_004936558:1,223,114...1,231,479 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17320900) Ensembl
MGI		 PMID:17320900 GO_REF:0000107 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425 		JBrowse link
G Ttn titin involved_in ISO (MGI:1314551|PMID:9817758) BHF-UCL PMID:9817758 MGI:1314551 NCBI chrNW_004936509:7,733,426...7,999,503 JBrowse link
G Wnt3a Wnt family member 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12636920)
(PMID:16291790), (PMID:8299937)		 Ensembl
MGI		 PMID:8299937 PMID:12636920 PMID:16291790 GO_REF:0000107 NCBI chrNW_004936864:150,742...179,205
Ensembl chrNW_004936864:150,732...192,423 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19795512) Ensembl
MGI		 PMID:19795512 GO_REF:0000107 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159 		JBrowse link
G Xrcc2 X-ray repair cross complementing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17116431) Ensembl
MGI		 PMID:17116431 GO_REF:0000107 NCBI chrNW_004936527:7,760,609...7,785,360
Ensembl chrNW_004936527:7,760,719...7,785,391 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (PMID:16157277), (PMID:16598713) MGI PMID:16157277 PMID:16598713 NCBI chrNW_004936469:32,240,730...32,372,413
Ensembl chrNW_004936469:32,240,835...32,371,267 		JBrowse link
spongiotrophoblast cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Igf2 insulin like growth factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936816:972,902...981,232
Ensembl chrNW_004936816:972,282...979,167 		JBrowse link
spongiotrophoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9331331) Ensembl
MGI		 PMID:9331331 GO_REF:0000107 NCBI chrNW_004936794:567,462...569,195
Ensembl chrNW_004936794:568,567...569,139 		JBrowse link
G Gjb5 gap junction protein beta 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17961533) Ensembl
MGI		 PMID:17961533 GO_REF:0000107 NCBI chrNW_004936474:17,402,804...17,406,080
Ensembl chrNW_004936474:17,405,000...17,405,809 		JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (PMID:24855001) MGI PMID:24855001 NCBI chrNW_004936494:5,761,801...5,853,673
Ensembl chrNW_004936494:5,758,347...5,851,952 		JBrowse link
G Lif LIF interleukin 6 family cytokine involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16258063) Ensembl
MGI		 PMID:16258063 GO_REF:0000107 NCBI chrNW_004936904:410,043...413,256
Ensembl chrNW_004936904:410,043...413,257 		JBrowse link
spongiotrophoblast layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16981008) Ensembl
MGI		 PMID:16981008 GO_REF:0000107 NCBI chrNW_004936528:8,005,223...8,007,586
Ensembl chrNW_004936528:8,005,189...8,007,643 		JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936794:567,462...569,195
Ensembl chrNW_004936794:568,567...569,139 		JBrowse link
G Birc6 baculoviral IAP repeat containing 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15485903) Ensembl
MGI		 PMID:15485903 GO_REF:0000107 NCBI chrNW_004936493:903,295...1,115,434
Ensembl chrNW_004936493:899,961...1,115,493 		JBrowse link
G Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14673158) Ensembl
MGI		 PMID:14673158 GO_REF:0000107 NCBI chrNW_004936762:1,387,354...1,392,955
Ensembl chrNW_004936762:1,387,346...1,391,967 		JBrowse link
G Fbxw8 F-box and WD repeat domain containing 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16880526) Ensembl
MGI		 PMID:16880526 GO_REF:0000107 NCBI chrNW_004936558:5,423,815...5,523,649
Ensembl chrNW_004936558:5,421,976...5,523,676 		JBrowse link
G Senp2 SUMO specific peptidase 2 acts_upstream_of_or_within ISO (PMID:19090619) MGI PMID:19090619 NCBI chrNW_004936578:4,252,718...4,290,452
Ensembl chrNW_004936578:4,248,244...4,290,418 		JBrowse link
G Zfat zinc finger and AT-hook domain containing involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20660741) Ensembl
MGI		 PMID:20660741 GO_REF:0000107 NCBI chrNW_004936470:14,974,493...15,151,029
Ensembl chrNW_004936470:14,977,496...15,151,041 		JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15226444) Ensembl
MGI		 PMID:15226444 GO_REF:0000107 NCBI chrNW_004936495:12,045,679...12,050,737
Ensembl chrNW_004936495:12,045,377...12,051,536 		JBrowse link
spongiotrophoblast layer developmental growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plac1 placenta enriched 1 acts_upstream_of_or_within ISO (PMID:22729990) MGI PMID:22729990 NCBI chrNW_004936691:602,707...603,342 JBrowse link
syncytiotrophoblast cell differentiation involved in labyrinthine layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 acts_upstream_of_or_within ISO (PMID:21972064) MGI PMID:21972064 NCBI chrNW_004936797:332,962...377,397 JBrowse link
G Fzd5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23610556) Ensembl
MGI		 PMID:23610556 GO_REF:0000107 NCBI chrNW_004936631:3,909,046...3,915,939
Ensembl chrNW_004936631:3,911,693...3,915,560 		JBrowse link
trophectodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:9272950) MGI PMID:9272950 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Bysl bystin like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17242206) Ensembl
MGI		 PMID:17242206 GO_REF:0000107 NCBI chrNW_004936476:17,887,998...17,896,598
Ensembl chrNW_004936476:17,888,335...17,896,268 		JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO (PMID:17138661) MGI PMID:17138661 NCBI chrNW_004936475:18,990,529...19,065,954
Ensembl chrNW_004936475:18,990,474...19,067,203 		JBrowse link
G Cdx2 caudal type homeobox 2 acts_upstream_of_or_within ISO (PMID:25397698)
(PMID:15788452), (PMID:20404091)
(PMID:16325584), (PMID:25397698)		 MGI PMID:15788452 PMID:16325584 PMID:20404091 PMID:25397698 NCBI chrNW_004936472:23,137,936...23,141,205 JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16579983) Ensembl
MGI		 PMID:16579983 GO_REF:0000107 NCBI chrNW_004936560:6,353,901...6,356,749
Ensembl chrNW_004936560:6,354,338...6,356,735 		JBrowse link
G Cnot1 CCR4-NOT transcription complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:10,302,091...10,384,945
Ensembl chrNW_004936475:10,302,087...10,384,957 		JBrowse link
G Cnot2 CCR4-NOT transcription complex subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:7,938,934...8,040,409
Ensembl chrNW_004936545:7,938,934...8,042,117 		JBrowse link
G Cnot3 CCR4-NOT transcription complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936994:256,022...271,235
Ensembl chrNW_004936994:258,938...273,765 		JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24036311) Ensembl
MGI		 PMID:24036311 GO_REF:0000107 NCBI chrNW_004936528:7,585,937...7,613,022
Ensembl chrNW_004936528:7,585,787...7,613,047 		JBrowse link
G Eomes eomesodermin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16325584) Ensembl
MGI		 PMID:16325584 GO_REF:0000107 NCBI chrNW_004936473:18,825,969...18,833,179
Ensembl chrNW_004936473:18,825,942...18,833,179 		JBrowse link
G Foxd3 forkhead box D3 acts_upstream_of_or_within ISO (PMID:16039639) MGI PMID:16039639 NCBI chrNW_004936692:951,394...953,612
Ensembl chrNW_004936692:951,562...953,001 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:8,289,764...8,292,937
Ensembl chrNW_004936515:8,289,315...8,293,175 		JBrowse link
G Hopx HOP homeobox acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17576768) MGI
Ensembl		 PMID:17576768 GO_REF:0000107 NCBI chrNW_004936482:18,841,220...18,872,136
Ensembl chrNW_004936482:18,840,434...18,850,005 		JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11456449)
(PMID:10022836)		 Ensembl
MGI		 PMID:10022836 PMID:11456449 GO_REF:0000107 NCBI chrNW_004936659:1,890,786...1,892,619
Ensembl chrNW_004936659:1,891,080...1,892,123 		JBrowse link
G Nodal nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11456449) Ensembl
MGI		 PMID:11456449 GO_REF:0000107 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:16325584) MGI PMID:16325584 NCBI chrNW_004936837:827,568...838,933 JBrowse link
G Rbm46 RNA binding motif protein 46 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25397698) Ensembl
MGI		 PMID:25397698 GO_REF:0000107 NCBI chrNW_004936576:1,532,036...1,574,858
Ensembl chrNW_004936576:1,532,036...1,574,858 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of ISO (PMID:17507372) MGI PMID:17507372 NCBI chrNW_004936566:1,630,698...1,632,607
Ensembl chrNW_004936566:1,631,822...1,632,613 		JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO (PMID:17584888) MGI PMID:17584888 NCBI chrNW_004936512:10,655,116...10,693,025
Ensembl chrNW_004936512:10,655,349...10,693,042 		JBrowse link
G Sp3 Sp3 transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17584888) Ensembl
MGI		 PMID:17584888 GO_REF:0000107 NCBI chrNW_004936509:3,740,393...3,782,873
Ensembl chrNW_004936509:3,741,836...3,793,136 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17576768) MGI
Ensembl		 PMID:17576768 GO_REF:0000107 NCBI chrNW_004936476:16,779,941...16,789,499
Ensembl chrNW_004936476:16,782,233...16,789,130 		JBrowse link
G Tfap2c transcription factor AP-2 gamma acts_upstream_of_or_within ISO (PMID:20404091) MGI PMID:20404091 NCBI chrNW_004936875:491,032...498,732
Ensembl chrNW_004936875:491,017...498,734 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of		 IEA
ISO		 (PMID:26902285) Ensembl
MGI		 PMID:26902285 GO_REF:0000107 NCBI chrNW_004936551:5,638,383...5,740,523
Ensembl chrNW_004936551:5,634,751...5,740,567 		JBrowse link
trophectodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (PMID:10742100) MGI PMID:10742100 NCBI chrNW_004936837:827,568...838,933 JBrowse link
G Tead4 TEA domain transcription factor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18083014) Ensembl
MGI		 PMID:18083014 GO_REF:0000107 NCBI chrNW_004936606:3,310,905...3,358,519
Ensembl chrNW_004936606:3,310,823...3,356,509 		JBrowse link
trophectodermal cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1c activin A receptor type 1C acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15150278) MGI
Ensembl		 PMID:15150278 GO_REF:0000107 NCBI chrNW_004936469:20,892,715...20,964,674
Ensembl chrNW_004936469:20,892,466...20,960,098 		JBrowse link
G Cops2 COP9 signalosome subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12972599) Ensembl
MGI		 PMID:12972599 GO_REF:0000107 NCBI chrNW_004936471:11,412,147...11,437,056
Ensembl chrNW_004936471:11,410,543...11,437,096 		JBrowse link
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:20708584) MGI PMID:20708584 NCBI chrNW_004936846:528,768...584,599
Ensembl chrNW_004936846:532,972...575,689 		JBrowse link
G Esrrb estrogen related receptor beta acts_upstream_of_or_within ISO (PMID:9285590) MGI PMID:9285590 NCBI chrNW_004936488:5,350,133...5,452,366
Ensembl chrNW_004936488:5,292,466...5,454,689 		JBrowse link
G Grn granulin precursor acts_upstream_of ISO (PMID:15901638) MGI PMID:15901638 NCBI chrNW_004936541:793,548...800,271
Ensembl chrNW_004936541:793,523...800,217 		JBrowse link
G Zpr1 ZPR1 zinc finger involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:2,058,048...2,067,468
Ensembl chrNW_004936542:2,056,905...2,067,542 		JBrowse link
trophectodermal cellular morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10500095) Ensembl
MGI		 PMID:10500095 GO_REF:0000107 NCBI chrNW_004936569:6,067,230...6,131,467
Ensembl chrNW_004936569:6,065,367...6,132,316 		JBrowse link
G Esrrb estrogen related receptor beta acts_upstream_of_or_within ISO (PMID:9285590) MGI PMID:9285590 NCBI chrNW_004936488:5,350,133...5,452,366
Ensembl chrNW_004936488:5,292,466...5,454,689 		JBrowse link
G Nodal nodal growth differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11456449) Ensembl
MGI		 PMID:11456449 GO_REF:0000107 NCBI chrNW_004936521:8,171,146...8,178,802
Ensembl chrNW_004936521:8,171,146...8,178,705 		JBrowse link
trophoblast giant cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G E2f7 E2F transcription factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936568:5,206,135...5,245,324
Ensembl chrNW_004936568:5,206,135...5,244,450 		JBrowse link
G E2f8 E2F transcription factor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936654:322,863...339,365
Ensembl chrNW_004936654:322,863...338,699 		JBrowse link
G Elf5 E74 like ETS transcription factor 5 acts_upstream_of ISO (PMID:24859262) MGI PMID:24859262 NCBI chrNW_004936533:3,569,435...3,595,991
Ensembl chrNW_004936533:3,569,452...3,596,004 		JBrowse link
G Erf ETS2 repressor factor acts_upstream_of_or_within ISO (PMID:17502352) MGI PMID:17502352 NCBI chrNW_004936706:255,479...263,154
Ensembl chrNW_004936706:255,407...263,179 		JBrowse link
G Gjb5 gap junction protein beta 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24866916) Ensembl
MGI		 PMID:24866916 GO_REF:0000107 NCBI chrNW_004936474:17,402,804...17,406,080
Ensembl chrNW_004936474:17,405,000...17,405,809 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23911935) Ensembl
MGI		 PMID:23911935 GO_REF:0000107 NCBI chrNW_004936515:8,289,764...8,292,937
Ensembl chrNW_004936515:8,289,315...8,293,175 		JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (PMID:24855001) MGI PMID:24855001 NCBI chrNW_004936494:5,761,801...5,853,673
Ensembl chrNW_004936494:5,758,347...5,851,952 		JBrowse link
G Lif LIF interleukin 6 family cytokine involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16258063) Ensembl
MGI		 PMID:16258063 GO_REF:0000107 NCBI chrNW_004936904:410,043...413,256
Ensembl chrNW_004936904:410,043...413,257 		JBrowse link
G Mdfi MyoD family inhibitor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9799236) Ensembl
MGI		 PMID:9799236 GO_REF:0000107 NCBI chrNW_004936476:18,262,662...18,276,159
Ensembl chrNW_004936476:18,263,194...18,275,935 		JBrowse link
G Nr2f2 nuclear receptor subfamily 2 group F member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17404209) Ensembl
MGI		 PMID:17404209 GO_REF:0000107 NCBI chrNW_004936483:6,886,447...6,900,986
Ensembl chrNW_004936483:6,886,153...6,900,997 		JBrowse link
G Palld palladin, cytoskeletal associated protein ISO RGD PMID:16481593 RGD:2325785 NCBI chrNW_004936516:786,358...1,151,910
Ensembl chrNW_004936516:802,484...1,151,801 		JBrowse link
G Plg plasminogen involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12900459) Ensembl
MGI		 PMID:12900459 GO_REF:0000107 NCBI chrNW_004936489:11,775,243...11,808,482
Ensembl chrNW_004936489:11,775,243...11,805,651 		JBrowse link
G Plk4 polo like kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936642:2,837,041...2,855,369
Ensembl chrNW_004936642:2,837,022...2,855,103 		JBrowse link
G Prdm1 PR/SET domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22987638) Ensembl
MGI		 PMID:22987638 GO_REF:0000107 NCBI chrNW_004936564:2,594,362...2,690,680
Ensembl chrNW_004936564:2,667,660...2,690,683 		JBrowse link
G Senp2 SUMO specific peptidase 2 acts_upstream_of_or_within ISO (PMID:19090619) MGI PMID:19090619 NCBI chrNW_004936578:4,252,718...4,290,452
Ensembl chrNW_004936578:4,248,244...4,290,418 		JBrowse link
G Snai1 snail family transcriptional repressor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9676199) Ensembl
MGI		 PMID:9676199 GO_REF:0000107 NCBI chrNW_004936514:4,456,498...4,462,436
Ensembl chrNW_004936514:4,456,484...4,462,987 		JBrowse link
G Sox15 SRY-box transcription factor 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:865,878...868,241
Ensembl chrNW_004936595:861,223...867,850 		JBrowse link
Wnt signaling pathway involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18257070) Ensembl
MGI		 PMID:18257070 GO_REF:0000107 NCBI chrNW_004936787:307,290...309,963
Ensembl chrNW_004936787:306,941...310,166 		JBrowse link
G Lrp6 LDL receptor related protein 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15469977) TreeGrafter
MGI		 PMID:15469977 GO_REF:0000118 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191 		JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18257070) Ensembl
MGI		 PMID:18257070 GO_REF:0000107 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017 		JBrowse link
G Sfrp2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18257070) Ensembl
MGI		 PMID:18257070 GO_REF:0000107 NCBI chrNW_004936576:604,174...612,440
Ensembl chrNW_004936576:604,069...613,021 		JBrowse link
zona limitans intrathalamica formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule ISO RGD PMID:25281935 RGD:12832757 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15969
    multicellular organismal process 7386
      multicellular organism development 4836
        embryo development 1278
          embryo development ending in birth or egg hatching 843
            chordate embryonic development 828
              embryonic skeletal system development + 143
              in utero embryonic development + 533
              neural crest formation + 14
              neural plate development + 13
              neural tube development + 196
              pharyngeal system development + 33
              somitogenesis + 74
Path 2
Term Annotations click to browse term
  biological_process 15969
    developmental process 6329
      anatomical structure development 5961
        multicellular organism development 4836
          embryo development 1278
            embryo development ending in birth or egg hatching 843
              chordate embryonic development 828
                embryonic skeletal system development + 143
                in utero embryonic development + 533
                neural crest formation + 14
                neural plate development + 13
                neural tube development + 196
                pharyngeal system development + 33
                somitogenesis + 74
paths to the root