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ONTOLOGY REPORT - ANNOTATIONS


Term:cytoplasmic sequestering of transcription factor
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Accession:GO:0042994 term browser browse the term
Definition:The selective interaction of a transcription factor with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus.
Synonyms:exact_synonym: cytoplasmic retention of transcription factor;   cytoplasmic sequestration of transcription factor;   cytoplasmic storage of transcription factor;   maintenance of transcription factor protein location in cytoplasm;   retention of transcription factor in cytoplasm;   sequestering of transcription factor in cytoplasm;   sequestration of transcription factor in cytoplasm;   storage of transcription factor in cytoplasm;   transcription factor binding, cytoplasmic sequestering



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cytoplasmic sequestering of transcription factor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb3 cAMP responsive element binding protein 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:43,562,658...43,567,061
Ensembl chr 4:43,562,332...43,567,060
JBrowse link
G Keap1 kelch-like ECH-associated protein 1 involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
RGD
PMID:11439354 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 RGD:727319 NCBI chr 9:21,229,730...21,239,332
Ensembl chr 9:21,229,730...21,239,361
JBrowse link
G Nfkbia nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:55,489,409...55,492,647
Ensembl chr12:55,489,410...55,492,647
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in IMP (MGI:5315699|PMID:16311606) BHF-UCL PMID:16311606 MGI:5315699 NCBI chr17:24,548,689...24,596,514
Ensembl chr17:24,549,834...24,596,508
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:104,453,982...104,505,819
Ensembl chr 5:104,459,450...104,505,819
JBrowse link
G Sri sorcin involved_in IMP (MGI:5487506|PMID:22338092) BHF-UCL PMID:22338092 MGI:5487506 NCBI chr 5:8,046,078...8,069,314
Ensembl chr 5:8,046,078...8,069,379
JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling involved_in
acts_upstream_of_or_within
IBA
IGI
(MGI:6201960|PMID:21873635)
(MGI:3608582|PMID:16316410)
GO_Central
MGI
PMID:16316410 PMID:21873635 MGI:3608582 MGI:6201960 NCBI chr19:46,396,896...46,488,804
Ensembl chr19:46,396,896...46,488,804
JBrowse link
G Tacc3 transforming, acidic coiled-coil containing protein 3 acts_upstream_of_or_within IDA (MGI:1926513|PMID:11025203) MGI PMID:11025203 MGI:1926513 NCBI chr 5:33,658,128...33,672,203
Ensembl chr 5:33,658,128...33,678,995
JBrowse link
G Thra thyroid hormone receptor alpha acts_upstream_of_or_within IDA (MGI:3619869|PMID:16322094) MGI PMID:16322094 MGI:3619869 NCBI chr11:98,740,776...98,769,006
Ensembl chr11:98,740,638...98,769,006
JBrowse link
cytoplasmic sequestering of NF-kappaB term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc22 coiled-coil domain containing 22 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:7,593,809...7,605,420
Ensembl chr  X:7,593,809...7,605,517
JBrowse link
G Faf1 Fas-associated factor 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:109,676,627...109,963,960
Ensembl chr 4:109,676,588...109,963,960
JBrowse link
G Nfkbia nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha involved_in ISO MGI
RGD
PMID:9343439 PMID:9918814 PMID:10620707 PMID:16580131 GO_REF:0000096 MGI:4417868 MGI:4834177 RGD:2298880 RGD:2298882 RGD:2298908 RGD:2298917 NCBI chr12:55,489,409...55,492,647
Ensembl chr12:55,489,410...55,492,647
JBrowse link
G Nfkbib nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
RGD
PMID:9343439 PMID:16580131 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 RGD:2298908 RGD:2298917 NCBI chr 7:28,758,251...28,766,644
Ensembl chr 7:28,758,251...28,767,512
JBrowse link
G Psmd10 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:140,948,425...140,956,711
Ensembl chr  X:140,948,429...140,956,728
JBrowse link
G Tmsb4x thymosin, beta 4, X chromosome involved_in ISO (PMID:21343177) CAFA PMID:21343177 NCBI chr  X:167,207,093...167,213,479
Ensembl chr  X:167,207,093...167,209,315
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28652
    biological regulation 13396
      regulation of molecular function 2704
        regulation of DNA-binding transcription factor activity 452
          negative regulation of DNA-binding transcription factor activity 177
            cytoplasmic sequestering of transcription factor 14
              cytoplasmic sequestering of NF-kappaB 6
Path 2
Term Annotations click to browse term
  biological_process 28652
    metabolic process 11338
      cellular metabolic process 10170
        cellular aromatic compound metabolic process 5571
          nucleobase-containing compound metabolic process 5339
            nucleic acid metabolic process 4899
              RNA metabolic process 4347
                RNA biosynthetic process 3410
                  nucleic acid-templated transcription 3396
                    transcription, DNA-templated 3392
                      regulation of transcription, DNA-templated 3287
                        regulation of DNA-binding transcription factor activity 452
                          negative regulation of DNA-binding transcription factor activity 177
                            cytoplasmic sequestering of transcription factor 14
                              cytoplasmic sequestering of NF-kappaB 6
paths to the root