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ONTOLOGY REPORT - ANNOTATIONS


Term:cytoplasmic sequestering of transcription factor
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Accession:GO:0042994 term browser browse the term
Definition:The selective interaction of a transcription factor with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus.
Synonyms:exact_synonym: cytoplasmic retention of transcription factor;   cytoplasmic sequestration of transcription factor;   cytoplasmic storage of transcription factor;   maintenance of transcription factor protein location in cytoplasm;   retention of transcription factor in cytoplasm;   sequestering of transcription factor in cytoplasm;   sequestration of transcription factor in cytoplasm;   storage of transcription factor in cytoplasm;   transcription factor binding, cytoplasmic sequestering


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cytoplasmic sequestering of transcription factor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb3 cAMP responsive element binding protein 3 involved_in ISO (PMID:20091349) UniProt PMID:20091349 NCBI chrNW_004955472:564,227...568,708
Ensembl chrNW_004955472:564,493...568,491
JBrowse link
G Keap1 kelch like ECH associated protein 1 ISO RGD PMID:11439354 RGD:727319 NCBI chrNW_004955495:1,704,695...1,711,339
Ensembl chrNW_004955495:1,704,695...1,711,290
JBrowse link
G Nfkbia NFKB inhibitor alpha involved_in ISO (PMID:1493333) UniProt PMID:1493333 NCBI chrNW_004955409:25,691,673...25,695,151
Ensembl chrNW_004955409:25,691,534...25,697,520
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in ISO (MGI:5315699|PMID:16311606) BHF-UCL PMID:16311606 MGI:5315699 NCBI chrNW_004955442:15,132,555...15,178,377
Ensembl chrNW_004955442:15,145,640...15,178,377
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:16311606) BHF-UCL PMID:16311606 NCBI chrNW_004955474:1,831,221...1,868,170
Ensembl chrNW_004955474:1,833,701...1,868,817
JBrowse link
G Sri sorcin involved_in ISO (MGI:5487506|PMID:22338092) BHF-UCL PMID:22338092 MGI:5487506 NCBI chrNW_004955432:5,541,311...5,559,781
Ensembl chrNW_004955432:5,541,311...5,560,294
JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO (MGI:3608582|PMID:16316410) MGI PMID:16316410 MGI:3608582 NCBI chrNW_004955485:7,805,244...7,925,414
Ensembl chrNW_004955485:7,808,131...7,925,677
JBrowse link
G Tacc3 transforming acidic coiled-coil containing protein 3 acts_upstream_of_or_within ISO (MGI:1926513|PMID:11025203) MGI PMID:11025203 MGI:1926513 NCBI chrNW_004955514:973,457...986,640
Ensembl chrNW_004955514:975,176...986,686
JBrowse link
G Thra thyroid hormone receptor alpha acts_upstream_of_or_within ISO (MGI:3619869|PMID:16322094) MGI PMID:16322094 MGI:3619869 NCBI chrNW_004955451:14,731,746...14,743,545
Ensembl chrNW_004955451:14,731,746...14,744,367
JBrowse link
cytoplasmic sequestering of NF-kappaB term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc22 coiled-coil domain containing 22 involved_in ISO (PMID:23563313) UniProt PMID:23563313 NCBI chrNW_004955543:719,185...731,788
Ensembl chrNW_004955543:718,996...733,753
JBrowse link
G Faf1 Fas associated factor 1 involved_in ISO (PMID:14600157) UniProt PMID:14600157 NCBI chrNW_004955464:8,037,344...8,477,798
Ensembl chrNW_004955464:8,036,955...8,479,249
JBrowse link
G Nfkbia NFKB inhibitor alpha involved_in ISO (PMID:16938301) RGD
BHF-UCL
PMID:9343439 PMID:9918814 PMID:10620707 PMID:16580131 PMID:16938301 RGD:2298880 RGD:2298882 RGD:2298908 RGD:2298917 NCBI chrNW_004955409:25,691,673...25,695,151
Ensembl chrNW_004955409:25,691,534...25,697,520
JBrowse link
G Nfkbib NFKB inhibitor beta ISO RGD PMID:9343439 PMID:16580131 RGD:2298908 RGD:2298917 NCBI chrNW_004955468:617,078...626,151
Ensembl chrNW_004955468:617,078...626,151
JBrowse link
G Psmd10 proteasome 26S subunit, non-ATPase 10 involved_in ISO (PMID:18040287) UniProt PMID:18040287 NCBI chrNW_004955490:7,825,202...7,832,347
Ensembl chrNW_004955490:7,825,251...7,833,772
JBrowse link
G Tmsb4x thymosin beta 4 X-linked involved_in ISO (PMID:21343177) CAFA PMID:21343177 NCBI chrNW_004955544:266,397...268,447
Ensembl chrNW_004955544:266,397...268,447
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12107
    biological regulation 8915
      regulation of molecular function 2100
        regulation of DNA-binding transcription factor activity 412
          negative regulation of DNA-binding transcription factor activity 167
            cytoplasmic sequestering of transcription factor 14
              cytoplasmic sequestering of NF-kappaB 6
Path 2
Term Annotations click to browse term
  biological_process 12107
    metabolic process 7728
      cellular metabolic process 7085
        cellular aromatic compound metabolic process 3910
          nucleobase-containing compound metabolic process 3732
            nucleic acid metabolic process 3436
              RNA metabolic process 2979
                RNA biosynthetic process 2395
                  nucleic acid-templated transcription 2382
                    transcription, DNA-templated 2377
                      regulation of transcription, DNA-templated 2307
                        regulation of DNA-binding transcription factor activity 412
                          negative regulation of DNA-binding transcription factor activity 167
                            cytoplasmic sequestering of transcription factor 14
                              cytoplasmic sequestering of NF-kappaB 6
paths to the root