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ONTOLOGY REPORT - ANNOTATIONS


Term:cytoplasmic sequestering of transcription factor
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Accession:GO:0042994 term browser browse the term
Definition:The selective interaction of a transcription factor with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus.
Synonyms:exact_synonym: cytoplasmic retention of transcription factor;   cytoplasmic sequestration of transcription factor;   cytoplasmic storage of transcription factor;   maintenance of transcription factor protein location in cytoplasm;   retention of transcription factor in cytoplasm;   sequestering of transcription factor in cytoplasm;   sequestration of transcription factor in cytoplasm;   storage of transcription factor in cytoplasm;   transcription factor binding, cytoplasmic sequestering



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cytoplasmic sequestering of transcription factor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CREB3 cAMP responsive element binding protein 3 involved_in ISO (PMID:20091349) UniProt PMID:20091349 NCBI chr 9:35,583,351...35,587,870
Ensembl chr 9:36,385,867...36,390,540
JBrowse link
G KEAP1 kelch like ECH associated protein 1 ISO RGD PMID:11439354 RGD:727319 NCBI chr19:10,037,544...10,055,091
Ensembl chr19:10,701,303...10,717,604
JBrowse link
G LOC100972297 polycystin-1 involved_in ISO (MGI:5315699|PMID:16311606) BHF-UCL PMID:16311606 MGI:5315699 NCBI chr16:604,927...1,697,831 JBrowse link
G NFKBIA NFKB inhibitor alpha involved_in ISO (PMID:1493333) UniProt PMID:1493333 NCBI chr14:16,155,331...16,158,588 JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:80,295,243...80,365,271
Ensembl chr 4:91,019,734...91,086,775
JBrowse link
G SRI sorcin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:80,199,719...80,214,733
Ensembl chr 7:93,850,496...93,864,029
JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3608582|PMID:16316410) MGI
Ensembl
PMID:16316410 GO_REF:0000107 MGI:3608582 NCBI chr10:99,107,516...99,231,761
Ensembl chr10:102,571,886...102,696,472
JBrowse link
G TACC3 transforming acidic coiled-coil containing protein 3 acts_upstream_of_or_within ISO (MGI:1926513|PMID:11025203) MGI PMID:11025203 MGI:1926513 NCBI chr 4:1,858,595...1,882,727
Ensembl chr 4:1,772,836...1,796,019
JBrowse link
G THRA thyroid hormone receptor alpha acts_upstream_of_or_within ISO (MGI:3619869|PMID:16322094) MGI PMID:16322094 MGI:3619869 NCBI chr17:17,196,459...17,226,263 JBrowse link
cytoplasmic sequestering of NF-kappaB term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC22 coiled-coil domain containing 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:41,535,439...41,550,547
Ensembl chr  X:49,387,980...49,402,742
JBrowse link
G FAF1 Fas associated factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:49,679,198...50,207,129
Ensembl chr 1:51,188,540...51,606,904
JBrowse link
G NFKBIA NFKB inhibitor alpha involved_in ISO (PMID:16938301) RGD
BHF-UCL
PMID:9343439 PMID:9918814 PMID:10620707 PMID:16580131 PMID:16938301 RGD:2298880 RGD:2298882 RGD:2298908 RGD:2298917 NCBI chr14:16,155,331...16,158,588 JBrowse link
G NFKBIB NFKB inhibitor beta ISO RGD PMID:9343439 PMID:16580131 RGD:2298908 RGD:2298917 NCBI chr19:36,005,797...36,015,897 JBrowse link
G PSMD10 proteasome 26S subunit, non-ATPase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:97,182,090...97,189,523
Ensembl chr  X:107,552,186...107,559,616
JBrowse link
G TMSB4X thymosin beta 4 X-linked involved_in ISO (PMID:21343177) CAFA PMID:21343177 NCBI chr  X:5,587,242...5,589,417 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15229
    biological regulation 10799
      regulation of molecular function 2691
        regulation of DNA-binding transcription factor activity 436
          negative regulation of DNA-binding transcription factor activity 177
            cytoplasmic sequestering of transcription factor 14
              cytoplasmic sequestering of NF-kappaB 6
Path 2
Term Annotations click to browse term
  biological_process 15229
    metabolic process 9937
      cellular metabolic process 8986
        cellular aromatic compound metabolic process 4864
          nucleobase-containing compound metabolic process 4665
            nucleic acid metabolic process 4276
              RNA metabolic process 3801
                RNA biosynthetic process 3039
                  nucleic acid-templated transcription 3023
                    transcription, DNA-templated 3021
                      regulation of transcription, DNA-templated 2921
                        regulation of DNA-binding transcription factor activity 436
                          negative regulation of DNA-binding transcription factor activity 177
                            cytoplasmic sequestering of transcription factor 14
                              cytoplasmic sequestering of NF-kappaB 6
paths to the root