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ONTOLOGY REPORT - ANNOTATIONS

Term:xenobiotic transport
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Accession:GO:0042908 term browser browse the term
Definition:The directed movement of a xenobiotic, a compound foreign to living organisms, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

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xenobiotic transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07028997.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:1,741,216...1,744,647 JBrowse link
G AABR07029596.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr10:39,330,731...39,373,437 JBrowse link
G Abca3 ATP binding cassette subfamily A member 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:26903515)		 UniProt
RGD		 PMID:26903515 GO_REF:0000024 NCBI chr10:13,723,365...13,780,558
Ensembl chr10:13,723,405...13,779,963 		JBrowse link
G Abca8 ATP binding cassette subfamily A member 8 involved_in ISO (PMID:12379217) RGD PMID:12379217 NCBI chr10:98,236,919...98,308,288
Ensembl chr10:98,237,141...98,294,522 		JBrowse link
G Abcb11 ATP binding cassette subfamily B member 11 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:55,480,024...55,587,946
Ensembl chr 3:55,480,024...55,587,946 		JBrowse link
G Abcb1b ATP-binding cassette, subfamily B (MDR/TAP), member 1B involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:22,225,123...22,307,577
Ensembl chr 4:22,133,521...22,425,515 		JBrowse link
G Abcb4 ATP binding cassette subfamily B member 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:22,133,984...22,192,687
Ensembl chr 4:22,133,521...22,425,515 		JBrowse link
G Abcc1 ATP binding cassette subfamily C member 1 involved_in IMP
ISO
IBA		 (MGI:6368305|PMID:26200696)
PMID:21873635		 RGD PMID:26200696, PMID:12893836, PMID:21873635 MGI:6368305, RGD:2303061, RGD:13792537 NCBI chr10:549,537...672,235
Ensembl chr10:549,883...672,196 		JBrowse link
G Abcc10 ATP binding cassette subfamily C member 10 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:17,041,351...17,061,263
Ensembl chr 9:17,041,389...17,063,780 		JBrowse link
G Abcc3 ATP binding cassette subfamily C member 3 involved_in ISO
IEA		 (PMID:18698235), (PMID:19334674)
GO_REF:0000107		 RGD
Ensembl		 PMID:18698235 PMID:19334674 GO_REF:0000107 NCBI chr10:82,047,308...82,116,928
Ensembl chr10:82,047,863...82,117,109 		JBrowse link
G Abcc4 ATP binding cassette subfamily C member 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:103,695,415...103,927,980
Ensembl chr15:103,696,557...103,927,592 		JBrowse link
G Abcc5 ATP binding cassette subfamily C member 5 involved_in ISO
IEA		 (PMID:10840050), (PMID:12695538)
GO_REF:0000107		 RGD
Ensembl		 PMID:10840050 PMID:12695538 GO_REF:0000107 NCBI chr11:84,395,982...84,490,215
Ensembl chr11:84,396,033...84,490,211 		JBrowse link
G Abcc6 ATP binding cassette subfamily C member 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:101,954,786...102,013,252
Ensembl chr 1:101,959,540...102,013,243 		JBrowse link
G Gja1 gap junction protein, alpha 1 involved_in ISO (MGI:6368305|PMID:26200696) RGD PMID:26200696 MGI:6368305 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089 		JBrowse link
G Nr1i2 nuclear receptor subfamily 1, group I, member 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:12578355)		 UniProt
RGD		 PMID:12578355 GO_REF:0000024 NCBI chr11:65,022,100...65,058,546
Ensembl chr11:65,022,100...65,058,545 		JBrowse link
G Slc15a2 solute carrier family 15 member 2 involved_in ISO (MGI:6393187|PMID:17452417) RGD PMID:17452417 MGI:6393187 NCBI chr11:66,932,664...66,961,708
Ensembl chr11:66,932,614...66,961,713 		JBrowse link
G Slc18a1 solute carrier family 18 member A1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:22,358,646...22,395,183
Ensembl chr16:22,361,998...22,395,183 		JBrowse link
G Slc18a2 solute carrier family 18 member A2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:280,397,831...280,457,968
Ensembl chr 1:280,423,079...280,457,148 		JBrowse link
G Slc22a1 solute carrier family 22 member 1 involved_in ISO
IMP		 (PMID:20477935), (PMID:22806583), (PMID:24291757), (PMID:28362799)
(MGI:6436440|PMID:20477935)		 RGD PMID:20477935 PMID:22806583 PMID:24291757 PMID:28362799, PMID:20477935 MGI:6436440, RGD:30309941 NCBI chr 1:48,273,639...48,300,645
Ensembl chr 1:48,273,611...48,300,655 		JBrowse link
G Slc22a18 solute carrier family 22, member 18 involved_in ISO (PMID:9744804) RGD PMID:9744804 NCBI chr 1:216,676,330...216,700,632
Ensembl chr 1:216,677,373...216,700,641 		JBrowse link
G Slc22a2 solute carrier family 22 member 2 involved_in IDA
ISO
IEA
IMP		 PMID:20924140
(MGI:6436440|PMID:20477935)
GO_REF:0000107
(PMID:20477935), (PMID:22806583), (PMID:24291757), (PMID:9687576)		 RGD
Ensembl		 PMID:9687576 PMID:20477935 PMID:22806583 PMID:24291757, PMID:20924140, PMID:20477935 GO_REF:0000107 MGI:6436440, RGD:30309940, RGD:30309941 NCBI chr 1:48,318,025...48,360,219
Ensembl chr 1:48,317,995...48,360,261 		JBrowse link
G Slc22a3 solute carrier family 22 member 3 involved_in ISO (PMID:20858707), (PMID:22806583), (PMID:24291757) RGD PMID:20858707 PMID:22806583 PMID:24291757 NCBI chr 1:48,433,079...48,521,261
Ensembl chr 1:48,433,079...48,521,256 		JBrowse link
G Slc22a4 solute carrier family 22 member 4 involved_in ISO (PMID:23567998) RGD PMID:23567998 NCBI chr10:39,334,972...39,373,508 JBrowse link
G Slc29a4 solute carrier family 29 member 4 involved_in ISO (PMID:20858707), (PMID:26376205), (PMID:31842924)
(MGI:5484979|PMID:23255610)		 RGD PMID:20858707 PMID:23255610 PMID:26376205 PMID:31842924 MGI:5484979 NCBI chr12:13,914,114...13,924,511
Ensembl chr12:13,914,114...13,924,531 		JBrowse link
G Slc2a1 solute carrier family 2 member 1 IDA RGD PMID:17064664 RGD:1624248 NCBI chr 5:138,154,677...138,182,897
Ensembl chr 5:138,154,673...138,182,897 		JBrowse link
G Slc47a1 solute carrier family 47 member 1 involved_in ISO (PMID:23864433) RGD PMID:23864433 NCBI chr10:47,631,425...47,685,379
Ensembl chr10:47,632,192...47,666,921 		JBrowse link
G Slc47a2 solute carrier family 47 member 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:47,587,909...47,631,373
Ensembl chr10:47,588,497...47,630,799 		JBrowse link
G Slc7a5 solute carrier family 7 member 5 involved_in ISO (PMID:23567998), (PMID:30374619) RGD PMID:23567998 PMID:30374619 NCBI chr19:54,693,959...54,722,563
Ensembl chr19:54,693,959...54,722,563 		JBrowse link
taurine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrc8a leucine rich repeat containing 8 VRAC subunit A involved_in IMP PMID:28833202 UniProt PMID:28833202 RGD:13673739 NCBI chr 3:8,801,544...8,829,506
Ensembl chr 3:8,802,852...8,828,533 		JBrowse link
G Lrrc8c leucine rich repeat containing 8 VRAC subunit C involved_in IMP PMID:28833202 UniProt PMID:28833202 RGD:13673739 NCBI chr14:5,283,655...5,378,738
Ensembl chr14:5,283,647...5,378,726 		JBrowse link
G Lrrc8d leucine rich repeat containing 8 VRAC subunit D involved_in ISO
IMP
ISS
IEA		 (PMID:28193731)
PMID:28833202
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:28193731, PMID:28833202 GO_REF:0000024 GO_REF:0000107, RGD:13673739 NCBI chr14:5,085,606...5,194,808
Ensembl chr14:5,086,054...5,101,177 		JBrowse link
G Slc36a1 solute carrier family 36 member 1 involved_in ISO (PMID:19074966) RGD PMID:19074966 NCBI chr10:40,538,013...40,573,304
Ensembl chr10:40,543,288...40,574,444 		JBrowse link
G Slc6a13 solute carrier family 6 member 13 involved_in IEA
ISO
IMP		 GO_REF:0000107
(MGI:5462132|PMID:22896705)
PMID:22678999		 Ensembl
RGD		 PMID:22896705, PMID:22678999 GO_REF:0000107 MGI:5462132, RGD:30309926 NCBI chr 4:153,874,942...153,912,185
Ensembl chr 4:153,874,852...153,912,155 		JBrowse link
G Slc6a6 solute carrier family 6 member 6 involved_in
acts_upstream_of_or_within		 IMP
IEA
ISO
IDA
IBA		 GO_REF:0000107
MGI:2179132 (MGI:1099585|PMID:9375654), (MGI:2158013|PMID:11772953), (MGI:51988|PMID:1465453)
PMID:18501699
(PMID:19074966), (PMID:23519128), (PMID:31903486)
PMID:21873635		 Ensembl
RGD		 PMID:1465453 PMID:9375654 PMID:11772953 PMID:19074966 PMID:23519128 PMID:31903486, PMID:1435737, PMID:18501699, PMID:21873635 GO_REF:0000107 MGI:1099585 MGI:2158013 MGI:51988, RGD:61757, RGD:30309916, RGD:13792537 NCBI chr 4:123,638,619...123,713,469
Ensembl chr 4:123,642,210...123,713,464 		JBrowse link
xenobiotic detoxification by transmembrane export across the plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A involved_in
acts_upstream_of_or_within		 IDA
ISO		 rhodamine 123
RNAcentral:URS000021202F_9606 (PMID:23893241), (PMID:26850595), (PMID:28260112)
(MGI:2158901|PMID:11741934)		 RGD PMID:11741934 PMID:23893241 PMID:26850595 PMID:28260112, PMID:16545584 MGI:2158901, RGD:2315567 NCBI chr 4:22,339,829...22,517,642
Ensembl chr 4:22,133,521...22,425,515 		JBrowse link
G Abcc1 ATP binding cassette subfamily C member 1 IDA RGD PMID:12423064 RGD:633704 NCBI chr10:549,537...672,235
Ensembl chr10:549,883...672,196 		JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 IMP RGD PMID:16857726 RGD:1598606 NCBI chr 1:263,554,426...263,612,556
Ensembl chr 1:263,554,453...263,613,252 		JBrowse link
G Abcg2 ATP binding cassette subfamily G member 2 IDA RGD PMID:15255930 RGD:1304349 NCBI chr 4:88,765,441...88,890,268
Ensembl chr 4:88,832,178...88,890,621 		JBrowse link
G Oscp1 organic solute carrier partner 1 involved_in ISO (PMID:16006562) RGD PMID:16006562 NCBI chr 5:144,067,391...144,099,693
Ensembl chr 5:144,067,416...144,098,207 		JBrowse link
G Ralbp1 ralA binding protein 1 involved_in ISO (PMID:10924126) RGD PMID:10924126 NCBI chr 9:113,579,107...113,598,477
Ensembl chr 9:113,579,107...113,598,480 		JBrowse link
G Slc17a3 solute carrier family 17 member 3 involved_in ISO (PMID:20810651) RGD PMID:20810651 NCBI chr17:43,518,760...43,545,160
Ensembl chr17:43,518,655...43,543,185 		JBrowse link
G Slc22a18 solute carrier family 22, member 18 involved_in ISO
IEA		 (PMID:9744804)
GO_REF:0000107		 RGD
Ensembl		 PMID:9744804 GO_REF:0000107 NCBI chr 1:216,676,330...216,700,632
Ensembl chr 1:216,677,373...216,700,641 		JBrowse link
xenobiotic transport across blood-brain barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A involved_in IMP
ISO		 (MGI:6369882|PMID:28587984)
(PMID:25986174)		 RGD PMID:25986174 PMID:28587984, PMID:25053619 MGI:6369882, RGD:11252095 NCBI chr 4:22,339,829...22,517,642
Ensembl chr 4:22,133,521...22,425,515 		JBrowse link
G Abcc1 ATP binding cassette subfamily C member 1 involved_in ISO
IEA		 (PMID:25986174)
GO_REF:0000107		 RGD
Ensembl		 PMID:25986174 GO_REF:0000107 NCBI chr10:549,537...672,235
Ensembl chr10:549,883...672,196 		JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 involved_in IMP
IGI		 PMID:12663688
PMID:17437408		 ARUK-UCL PMID:12663688, PMID:17437408 RGD:704399, RGD:14929203 NCBI chr 1:263,554,426...263,612,556
Ensembl chr 1:263,554,453...263,613,252 		JBrowse link
G Abcg2 ATP binding cassette subfamily G member 2 involved_in IC
ISO		 PMID:15773906
(PMID:12958161)		 RGD PMID:12958161, PMID:15773906 RGD:14929200 NCBI chr 4:88,765,441...88,890,268
Ensembl chr 4:88,832,178...88,890,621 		JBrowse link
G Slc22a1 solute carrier family 22 member 1 involved_in NAS PMID:20477935 ARUK-UCL PMID:20477935 RGD:30309941 NCBI chr 1:48,273,639...48,300,645
Ensembl chr 1:48,273,611...48,300,655 		JBrowse link
G Slc22a2 solute carrier family 22 member 2 involved_in NAS PMID:20477935 ARUK-UCL PMID:20477935 RGD:30309941 NCBI chr 1:48,318,025...48,360,219
Ensembl chr 1:48,317,995...48,360,261 		JBrowse link
xenobiotic transport across blood-nerve barrier term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn1 claudin 1 IMP RGD PMID:22733753 RGD:11341802 NCBI chr11:77,815,216...77,830,373
Ensembl chr11:77,815,181...77,830,416 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    localization 6449
      establishment of localization 4865
        transport 4700
          xenobiotic transport 41
            3-hydroxyphenylpropionic acid transmembrane transport 0
            acridine transport 0
            acriflavine transport 0
            alkanesulfonate transport + 6
            benomyl transport + 0
            benzoate transport 0
            nalidixic acid transport 0
            xenobiotic detoxification by transmembrane export across the cell outer membrane 0
            xenobiotic detoxification by transmembrane export across the plasma membrane + 8
            xenobiotic transport across blood-brain barrier 6
            xenobiotic transport across blood-nerve barrier 1
paths to the root