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ONTOLOGY REPORT - ANNOTATIONS


Term:9-cis-retinoic acid biosynthetic process
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Accession:GO:0042904 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of 9-cis-retinoic acid, a metabolically active vitamin A derivative.
Synonyms:exact_synonym: 9-cis-retinoic acid anabolism;   9-cis-retinoic acid biosynthesis;   9-cis-retinoic acid formation;   9-cis-retinoic acid synthesis



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9-cis-retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 acts_upstream_of_or_within ISO (MGI:2662611|PMID:11876656) RGD PMID:11876656 MGI:2662611 NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961
JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO (MGI:2662611|PMID:11876656) RGD PMID:11876656 MGI:2662611 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
JBrowse link
G Aldh8a1 aldehyde dehydrogenase 8 family, member A1 acts_upstream_of_or_within ISO (MGI:2662611|PMID:11876656) RGD PMID:11876656 MGI:2662611 NCBI chr 1:16,183,940...16,203,385
Ensembl chr 1:16,183,940...16,203,385
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IDA 9-cis- and all-trans-retinoic acid synthesized from 9-cis- and all-trans-retinal RGD PMID:8765131 RGD:2306683 NCBI chr 8:58,096,021...58,102,130
Ensembl chr 8:58,096,077...58,102,125
JBrowse link
G Dhrs9 dehydrogenase/reductase 9 involved_in ISO
ISS
(PMID:11304534)
GO_REF:0000024
RGD
UniProt
PMID:11304534 GO_REF:0000024 NCBI chr 3:54,147,834...54,170,052
Ensembl chr 3:54,147,803...54,220,241
JBrowse link
G Rdh16 retinol dehydrogenase 16 acts_upstream_of_or_within ISO (MGI:2662611|PMID:11876656) RGD PMID:11876656 MGI:2662611 NCBI chr 7:63,616,724...63,624,120
Ensembl chr 7:63,597,536...63,624,124
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20050
    metabolic process 12312
      hormone metabolic process 248
        retinoic acid metabolic process 27
          9-cis-retinoic acid metabolic process 6
            9-cis-retinoic acid biosynthetic process 6
Path 2
Term Annotations click to browse term
  biological_process 20050
    metabolic process 12312
      primary metabolic process 11063
        lipid metabolic process 1446
          cellular lipid metabolic process 1057
            isoprenoid metabolic process 127
              terpenoid metabolic process 98
                diterpenoid metabolic process 87
                  retinoid metabolic process 78
                    retinoic acid metabolic process 27
                      retinoic acid biosynthetic process 12
                        9-cis-retinoic acid biosynthetic process 6
paths to the root